E3 ubiquitin-protein ligase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 144 |
| AclWI | GGATC | 1 cut(s) | 404 |
| AcsI | RAATTY | 2 cut(s) | 69, 185 |
| AfaI | GTAC | 2 cut(s) | 88, 127 |
| AgsI | TTSAA | 3 cut(s) | 100, 367, 635 |
| AleI | CACNNNNGTG | 1 cut(s) | 329 |
| AluBI | AGCT | 7 cut(s) | 83, 116, 151, 238, 294, 500, 641 |
| AluI | AGCT | 7 cut(s) | 83, 116, 151, 238, 294, 500, 641 |
| Alw26I | GTCTC | 1 cut(s) | 538 |
| AlwI | GGATC | 1 cut(s) | 404 |
| Ama87I | CYCGRG | 1 cut(s) | 233 |
| ApeKI | GCWGC | 1 cut(s) | 419 |
| ApoI | RAATTY | 2 cut(s) | 69, 185 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 445, 477 |
| AsuHPI | GGTGA | 2 cut(s) | 238, 617 |
| AvaI | CYCGRG | 1 cut(s) | 233 |
| BbsI | GAAGAC | 1 cut(s) | 593 |
| BbvI | GCAGC | 1 cut(s) | 431 |
| BccI | CCATC | 3 cut(s) | 247, 434, 602 |
| BceAI | ACGGC | 1 cut(s) | 314 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 152, 186 |
| BclI | TGATCA | 2 cut(s) | 267, 393 |
| BcoDI | GTCTC | 1 cut(s) | 538 |
| BfaI | CTAG | 2 cut(s) | 84, 239 |
| BfmI | CTRYAG | 2 cut(s) | 282, 289 |
| BisI | GCNGC | 1 cut(s) | 420 |
| BlsI | GCNGC | 1 cut(s) | 421 |
| BmeT110I | CYCGRG | 1 cut(s) | 233 |
| BmrI | ACTGGG | 1 cut(s) | 591 |
| BmsI | GCATC | 4 cut(s) | 13, 219, 490, 521 |
| BmuI | ACTGGG | 1 cut(s) | 591 |
| BpiI | GAAGAC | 1 cut(s) | 593 |
| Bpu10I | CCTNAGC | 1 cut(s) | 540 |
| BpuEI | CTTGAG | 1 cut(s) | 173 |
| Bsa29I | ATCGAT | 1 cut(s) | 7 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 149, 179 |
| Bse1I | ACTGG | 1 cut(s) | 586 |
| BseCI | ATCGAT | 1 cut(s) | 7 |
| BseNI | ACTGG | 1 cut(s) | 586 |
| BseRI | GAGGAG | 1 cut(s) | 170 |
| BseXI | GCAGC | 1 cut(s) | 431 |
| BseYI | CCCAGC | 1 cut(s) | 116 |
| BshVI | ATCGAT | 1 cut(s) | 7 |
| BsiHKCI | CYCGRG | 1 cut(s) | 233 |
| BsiWI | CGTACG | 1 cut(s) | 125 |
| BsmAI | GTCTC | 1 cut(s) | 538 |
| BsoBI | CYCGRG | 1 cut(s) | 233 |
| Bsp143I | GATC | 4 cut(s) | 46, 267, 393, 409 |
| BspDI | ATCGAT | 1 cut(s) | 7 |
| BspPI | GGATC | 1 cut(s) | 404 |
| BspQI | GCTCTTC | 1 cut(s) | 21 |
| BsrI | ACTGG | 1 cut(s) | 586 |
| BssMI | GATC | 4 cut(s) | 46, 267, 393, 409 |
| Bst4CI | ACNGT | 1 cut(s) | 54 |
| Bst6I | CTCTTC | 1 cut(s) | 21 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 425 |
| BstDEI | CTNAG | 1 cut(s) | 540 |
| BstKTI | GATC | 4 cut(s) | 49, 270, 396, 412 |
| BstMAI | GTCTC | 1 cut(s) | 538 |
| BstMBI | GATC | 4 cut(s) | 46, 267, 393, 409 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 425, 467 |
| BstNSI | RCATGY | 1 cut(s) | 419 |
| BstSFI | CTRYAG | 2 cut(s) | 282, 289 |
| BstV1I | GCAGC | 1 cut(s) | 431 |
| BstV2I | GAAGAC | 1 cut(s) | 593 |
| BstX2I | RGATCY | 1 cut(s) | 409 |
| BstYI | RGATCY | 1 cut(s) | 409 |
| Bsu15I | ATCGAT | 1 cut(s) | 7 |
| BsuTUI | ATCGAT | 1 cut(s) | 7 |
| BtsI | GCAGTG | 1 cut(s) | 324 |
| BtsIMutI | CAGTG | 1 cut(s) | 324 |
| ClaI | ATCGAT | 1 cut(s) | 7 |
| CseI | GACGC | 1 cut(s) | 476 |
| Csp6I | GTAC | 2 cut(s) | 87, 126 |
| CviAII | CATG | 2 cut(s) | 271, 416 |
| CviQI | GTAC | 2 cut(s) | 87, 126 |
| DdeI | CTNAG | 1 cut(s) | 540 |
| DpnI | GATC | 4 cut(s) | 48, 269, 395, 411 |
| DpnII | GATC | 4 cut(s) | 46, 267, 393, 409 |
| Eam1104I | CTCTTC | 1 cut(s) | 21 |
| EarI | CTCTTC | 1 cut(s) | 21 |
| Eco88I | CYCGRG | 1 cut(s) | 233 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 2 cut(s) | 274, 419 |
| FatI | CATG | 2 cut(s) | 270, 415 |
| FauNDI | CATATG | 1 cut(s) | 521 |
| FbaI | TGATCA | 2 cut(s) | 267, 393 |
| Fnu4HI | GCNGC | 1 cut(s) | 420 |
| Fsp4HI | GCNGC | 1 cut(s) | 420 |
| FspBI | CTAG | 2 cut(s) | 84, 239 |
| GluI | GCNGC | 1 cut(s) | 420 |
| GsaI | CCCAGC | 1 cut(s) | 120 |
| HgaI | GACGC | 1 cut(s) | 476 |
| Hin1II | CATG | 2 cut(s) | 274, 419 |
| HindIII | AAGCTT | 1 cut(s) | 149 |
| HinfI | GANTC | 3 cut(s) | 158, 367, 631 |
| HphI | GGTGA | 2 cut(s) | 238, 617 |
| Hpy188I | TCNGA | 2 cut(s) | 163, 192 |
| Hpy188III | TCNNGA | 1 cut(s) | 635 |
| HpyAV | CCTTC | 1 cut(s) | 541 |
| HpyCH4III | ACNGT | 1 cut(s) | 54 |
| HpyCH4IV | ACGT | 1 cut(s) | 128 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 311, 419, 428, 512, 614 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 425, 467 |
| HpyF3I | CTNAG | 1 cut(s) | 540 |
| HpySE526I | ACGT | 1 cut(s) | 128 |
| Hsp92II | CATG | 2 cut(s) | 274, 419 |
| Ksp22I | TGATCA | 2 cut(s) | 267, 393 |
| Kzo9I | GATC | 4 cut(s) | 46, 267, 393, 409 |
| LguI | GCTCTTC | 1 cut(s) | 21 |
| LpnPI | CCDG | 2 cut(s) | 102, 567 |
| Lsp1109I | GCAGC | 1 cut(s) | 431 |
| LweI | GCATC | 4 cut(s) | 13, 219, 490, 521 |
| MaeI | CTAG | 2 cut(s) | 84, 239 |
| MaeII | ACGT | 1 cut(s) | 128 |
| MaeIII | GTNAC | 1 cut(s) | 556 |
| MalI | GATC | 4 cut(s) | 48, 269, 395, 411 |
| MboI | GATC | 4 cut(s) | 46, 267, 393, 409 |
| MboII | GAAGA | 5 cut(s) | 8, 25, 78, 262, 598 |
| MfeI | CAATTG | 1 cut(s) | 600 |
| MflI | RGATCY | 1 cut(s) | 409 |
| MluCI | AATT | 7 cut(s) | 69, 185, 306, 372, 432, 494, 600 |
| MlyI | GAGTC | 1 cut(s) | 167 |
| MmeI | TCCRAC | 3 cut(s) | 111, 381, 604 |
| MnlI | CCTC | 7 cut(s) | 70, 148, 217, 293, 337, 394, 555 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MslI | CAYNNNNRTG | 2 cut(s) | 99, 329 |
| MspA1I | CMGCKG | 1 cut(s) | 294 |
| MunI | CAATTG | 1 cut(s) | 600 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 425, 467 |
| NdeI | CATATG | 1 cut(s) | 521 |
| NdeII | GATC | 4 cut(s) | 46, 267, 393, 409 |
| NlaIII | CATG | 2 cut(s) | 274, 419 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 1 cut(s) | 419 |
| OliI | CACNNNNGTG | 1 cut(s) | 329 |
| PaeR7I | CTCGAG | 1 cut(s) | 233 |
| PciSI | GCTCTTC | 1 cut(s) | 21 |
| PfeI | GAWTC | 2 cut(s) | 367, 631 |
| Pfl23II | CGTACG | 1 cut(s) | 125 |
| PkrI | GCNGC | 1 cut(s) | 421 |
| PleI | GAGTC | 1 cut(s) | 166 |
| PpsI | GAGTC | 1 cut(s) | 166 |
| PsiI | TTATAA | 1 cut(s) | 144 |
| PspFI | CCCAGC | 1 cut(s) | 116 |
| PspLI | CGTACG | 1 cut(s) | 125 |
| PspXI | VCTCGAGB | 1 cut(s) | 233 |
| PsuI | RGATCY | 1 cut(s) | 409 |
| PvuII | CAGCTG | 1 cut(s) | 294 |
| RsaI | GTAC | 2 cut(s) | 88, 127 |
| RsaNI | GTAC | 2 cut(s) | 87, 126 |
| RseI | CAYNNNNRTG | 2 cut(s) | 99, 329 |
| SapI | GCTCTTC | 1 cut(s) | 21 |
| SatI | GCNGC | 1 cut(s) | 420 |
| Sau3AI | GATC | 4 cut(s) | 46, 267, 393, 409 |
| SchI | GAGTC | 1 cut(s) | 167 |
| SfaNI | GCATC | 4 cut(s) | 13, 219, 490, 521 |
| SfcI | CTRYAG | 2 cut(s) | 282, 289 |
| Sfr274I | CTCGAG | 1 cut(s) | 233 |
| SlaI | CTCGAG | 1 cut(s) | 233 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 99, 329 |
| SmlI | CTYRAG | 2 cut(s) | 152, 233 |
| SmoI | CTYRAG | 2 cut(s) | 152, 233 |
| Sse9I | AATT | 7 cut(s) | 69, 185, 306, 372, 432, 494, 600 |
| SspMI | CTAG | 2 cut(s) | 84, 239 |
| TaaI | ACNGT | 1 cut(s) | 54 |
| TaiI | ACGT | 1 cut(s) | 131 |
| TaqI | TCGA | 3 cut(s) | 7, 49, 234 |
| TasI | AATT | 7 cut(s) | 69, 185, 306, 372, 432, 494, 600 |
| TfiI | GAWTC | 2 cut(s) | 367, 631 |
| TscAI | CASTG | 1 cut(s) | 331 |
| TseI | GCWGC | 1 cut(s) | 419 |
| TspDTI | ATGAA | 3 cut(s) | 25, 117, 491 |
| TspRI | CASTG | 1 cut(s) | 331 |
| XapI | RAATTY | 2 cut(s) | 69, 185 |
| XceI | RCATGY | 1 cut(s) | 419 |
| XhoI | CTCGAG | 1 cut(s) | 233 |
| XspI | CTAG | 2 cut(s) | 84, 239 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |