Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0000271

Physical Location & Seq

Genomic Coordinates Forward (+)

8638229 .. 8640622

Gene Structure 2394 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG106000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1002 bp

ATGCTCACCTCCAAACCCTCTCACTCTCACTCTCACTCTCACTCTCCAATTCAAATTCTCACCGTCGACGACGACGACGACGACGATGCCGGCGCTGACGTAATCTTCCCTCCGATTCCCCACAGCTCCTCCTCCGCCGCGATCGCCGTCCACGACGATCGAAAAGACCCATCTGCCCCCAGATCATCTCCCTCCCCGACCAAAGTACCCACCTTTATCGACCTCTCCGACGAACCCGACGACGGAGACGACGACGAGATTCGGATTCTCCGATTCAAACCCACCAAAACCCACTTCAAAAAGCGAAGAACAAACCCGTTTACATCCGGGTCCGTATCGGAACCCGGCCAGTCCTCCTCCGATTCTCTCACCGACTACCCACCATTCGTGTGTGCTATTTGCGCCGACGACAAGCCTGGGTACCAATCTTTTCCGATCGAGAATTGCAACCACGTGTATTGCTCCGATTGTGTGATCAACTACATCGATTTCAAGCTCCAAGAAAACGAACCCACAATTCGGTGCCCTGTTCCGGGGTGCAAGGGTCTGCTGGAGCCCGAGTACTGCCGCTCGGTTCTGCCGGCTCAGGTGTTTGCGAGGTGGGGAAAGGCAATGTGTGATGCAGTGATACAGGGGTCGGAGAAATTCTACTGCCCATATCAGGACTGCTCTGCTCTGCTGATCGATGACGGGGAGGAGGTGGTGAGGGAGTCGCAGTGCCCGCATTGTGGGAGAATGTTCTGTGCTCAGTGCAAGGTTGCTTGGCATGTCGGGATGGATTGCAGCGAGTTTCAGAGGCTGAGTGTGGATGAGAGAGGGAATGAAGATGTTATGTTGAGGAACCTGGCCCAGAGCCAGAACTGGAGGAGGTGTCCCAGCTGCATGTTCTATGTCGAAAAGTCTGTTGGTTGCTCCTACATGAGATGCAGGTGTGGATATGCATTCTGTTACAATTGTGGAGTACAAGCTGTCAGTCATACCTGTCGAAGCTGTCATAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0012505 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044444 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR zf-C3HC4

Protein Analysis

333

Amino Acids

37.22

Weight (kDa)

5.35

Isoelectric Point (pI)

57.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBR	PF01485	203 - 261	1.2e-10	IBR domain, a half RING-finger domain
IBR	PF01485	278 - 331	8.9e-08	IBR domain, a half RING-finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000271)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14250
fragaria_vesca	FvH4_1g09490 FvH4_1g09500 FvH4_1g09500 FvH4_1g09510 FvH4_3g00870 FvH4_3g03010 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g35700 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220
malus_domestica	MD02G1102400.v1.1 MD02G1103700.v1.1 MD03G1111900.v1.1 MD09G1173800.v1.1 MD09G1230900.v1.1 MD09G1231400.v1.1 MD15G1224200.v1.1
prunus_persica	Prupe.3G031900_v2.0.a1 Prupe.3G107200_v2.0.a1 Prupe.7G191200_v2.0.a1 Prupe.7G191800_v2.0.a1 Prupe.8G007700_v2.0.a1
pyrus_communis	pycom02g08010 pycom02g08140 pycom09g14980 pycom09g15030 pycom15g19900
rosa_chinensis	RchiOBHm_Chr2g0096041 RchiOBHm_Chr2g0096051 RchiOBHm_Chr2g0096061 RchiOBHm_Chr2g0096071 RchiOBHm_Chr2g0096081 RchiOBHm_Chr2g0096221 RchiOBHm_Chr2g0131511 RchiOBHm_Chr2g0147691 RchiOBHm_Chr5g0001281 RchiOBHm_Chr5g0001301
rosa_laevigata	RLG00000016619 RLG00000016620 RLG00000016621 RLG00000016622 RLG00000019200 RLG00000020271 RLG00000025410 RLG00000030919 RLG00000031102 RLG00000031117 RLG00000031119 RLG00000031120
rosa_multiflora	Rmu_co8160592.1_g000001 Rmu_sc0001706.1_g000008 Rmu_sc0002494.1_g000005 Rmu_sc0004189.1_g000040 Rmu_sc0005612.1_g000008 Rmu_sc0005612.1_g000011 Rmu_sc0005612.1_g000012 Rmu_sc0006926.1_g000015 Rmu_sc0013257.1_g000002 Rmu_sc0034363.1_g000001 Rmu_sc0034363.1_g000002
rosa_roxburghii	Rroxscaffold_1G00072690 Rroxscaffold_1G00075020 Rroxscaffold_2G00145780 Rroxscaffold_2G00145790 Rroxscaffold_2G00145800 Rroxscaffold_2G00145810 Rroxscaffold_2G00145820 Rroxscaffold_2G00145830 Rroxscaffold_4G00300930 Rroxscaffold_6G00424750
rosa_rugosa	Rorug02G0056000 Rorug02G0056100 Rorug02G0056200 Rorug02G0056300 Rorug02G0056500 Rorug02G0056700 Rorug02G0298000.1 Rorug02G0400900 Rorug02G0401000 Rorug02G0401100 Rorug04G0389500 Rorug04G0389600 Rorug04G0389700 Rorug04G0402300
rosa_samantha	Rh2AG103800 Rh2AG458300 Rh2BG105400 Rh2BG105500 Rh2BG105600 Rh2BG105700 Rh2BG105900 Rh2BG357600 Rh2BG471000 Rh2DG106000 Rh2DG106100 Rh2DG106200 Rh2DG106300 Rh2DG106500 Rh2DG375400 Rh2DG480300 Rh5AG009500 Rh5AG009600 Rh5AG010000 Rh5AG028300 Rh5BG012400 Rh5BG012500 Rh5BG012700 Rh5BG028500
rosa_wichuraiana	Rw2G007950 Rw2G007960 Rw2G007970 Rw2G028490 Rw5G000980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	918
Acc36I	ACCTGC	1 cut(s)	918
Acc65I	GGTACC	1 cut(s)	420
AccB1I	GGYRCC	2 cut(s)	420, 522
AccBSI	CCGCTC	1 cut(s)	570
AccI	GTMKAC	1 cut(s)	66
AccII	CGCG	1 cut(s)	140
AciI	CCGC	4 cut(s)	135, 138, 568, 722
AcoI	YGGCCR	1 cut(s)	346
AcsI	RAATTY	2 cut(s)	54, 644
AcvI	CACGTG	1 cut(s)	454
AfaI	GTAC	4 cut(s)	207, 422, 563, 963
AfiI	CCNNNNNNNGG	6 cut(s)	242, 519, 532, 533, 661, 728
AflIII	ACRYGT	1 cut(s)	453
AgsI	TTSAA	4 cut(s)	53, 277, 298, 493
AjnI	CCWGG	2 cut(s)	415, 843
AjuI	GAANNNNNNNTTGG	4 cut(s)	278, 310, 888, 920
AluBI	AGCT	5 cut(s)	126, 496, 879, 968, 990
AluI	AGCT	5 cut(s)	126, 496, 879, 968, 990
Alw21I	GWGCWC	1 cut(s)	748
Alw26I	GTCTC	1 cut(s)	240
AlwNI	CAGNNNCTG	1 cut(s)	799
Ama87I	CYCGRG	1 cut(s)	557
AoxI	GGCC	2 cut(s)	346, 846
ApeKI	GCWGC	2 cut(s)	783, 879
ApoI	RAATTY	2 cut(s)	54, 644
AsiSI	GCGATCGC	1 cut(s)	144
Asp718I	GGTACC	1 cut(s)	420
AspLEI	GCGC	2 cut(s)	95, 404
AspS9I	GGNCC	2 cut(s)	330, 847
AsuC2I	CCSGG	3 cut(s)	328, 345, 534
AsuHPI	GGTGA	3 cut(s)	52, 361, 715
AvaI	CYCGRG	1 cut(s)	557
AvaII	GGWCC	1 cut(s)	330
BaeGI	GKGCMC	2 cut(s)	527, 722
BaeI	ACNNNNGTAYC	4 cut(s)	189, 222, 620, 653
BanI	GGYRCC	2 cut(s)	420, 522
BanII	GRGCYC	1 cut(s)	558
BbrPI	CACGTG	1 cut(s)	454
Bbv12I	GWGCWC	1 cut(s)	748
BbvI	GCAGC	2 cut(s)	795, 866
BccI	CCATC	2 cut(s)	178, 769
BceAI	ACGGC	1 cut(s)	131
BcgI	CGANNNNNNTGC	2 cut(s)	68, 102
BciT130I	CCWGG	2 cut(s)	417, 845
BclI	TGATCA	1 cut(s)	474
BcnI	CCSGG	3 cut(s)	328, 345, 534
BcoDI	GTCTC	1 cut(s)	240
BfoI	RGCGCY	1 cut(s)	96
BfuAI	ACCTGC	1 cut(s)	918
BisI	GCNGC	4 cut(s)	138, 568, 784, 880
BlsI	GCNGC	4 cut(s)	139, 569, 785, 881
BmcAI	AGTACT	1 cut(s)	563
Bme1390I	CCNGG	5 cut(s)	328, 345, 417, 534, 845
Bme18I	GGWCC	1 cut(s)	330
BmeT110I	CYCGRG	1 cut(s)	557
BmgT120I	GGNCC	2 cut(s)	330, 847
BmiI	GGNNCC	6 cut(s)	331, 342, 422, 524, 555, 842
BmrFI	CCNGG	5 cut(s)	328, 345, 417, 534, 845
BmsI	GCATC	3 cut(s)	76, 610, 914
BpmI	CTGGAG	2 cut(s)	572, 883
Bpu10I	CCTNAGC	1 cut(s)	585
BpuMI	CCSGG	3 cut(s)	328, 345, 534
Bsa29I	ATCGAT	2 cut(s)	486, 684
BsaAI	YACGTR	1 cut(s)	454
BsaJI	CCNNGG	2 cut(s)	416, 533
BsaXI	ACNNNNNCTCC	8 cut(s)	113, 143, 545, 575, 701, 731, 856, 886
Bsc4I	CCNNNNNNNGG	6 cut(s)	242, 519, 532, 533, 661, 728
Bse118I	RCCGGY	2 cut(s)	89, 580
Bse1I	ACTGG	2 cut(s)	349, 866
Bse3DI	GCAATG	1 cut(s)	618
BseBI	CCWGG	2 cut(s)	417, 845
BseCI	ATCGAT	2 cut(s)	486, 684
BseDI	CCNNGG	2 cut(s)	416, 533
BseGI	GGATG	3 cut(s)	323, 780, 814
BseLI	CCNNNNNNNGG	6 cut(s)	242, 519, 532, 533, 661, 728
BseMI	GCAATG	1 cut(s)	618
BseMII	CTCAG	3 cut(s)	599, 761, 791
BseNI	ACTGG	2 cut(s)	349, 866
BseRI	GAGGAG	5 cut(s)	118, 121, 346, 710, 880
BseSI	GKGCMC	2 cut(s)	527, 722
BseXI	GCAGC	2 cut(s)	795, 866
BseYI	CCCAGC	1 cut(s)	875
Bsh1236I	CGCG	1 cut(s)	140
Bsh1285I	CGRYCG	3 cut(s)	144, 160, 438
BshFI	GGCC	2 cut(s)	348, 848
BshNI	GGYRCC	2 cut(s)	420, 522
BshVI	ATCGAT	2 cut(s)	486, 684
BsiEI	CGRYCG	3 cut(s)	144, 160, 438
BsiHKAI	GWGCWC	1 cut(s)	748
BsiHKCI	CYCGRG	1 cut(s)	557
BsiSI	CCGG	5 cut(s)	90, 327, 345, 533, 581
BslFI	GGGAC	1 cut(s)	858
BslI	CCNNNNNNNGG	6 cut(s)	242, 519, 532, 533, 661, 728
BsmAI	GTCTC	1 cut(s)	240
BsmBI	CGTCTC	1 cut(s)	240
BsmFI	GGGAC	1 cut(s)	858
BsmI	GAATGC	1 cut(s)	941
BsnI	GGCC	2 cut(s)	348, 848
BsoBI	CYCGRG	1 cut(s)	557
Bsp1286I	GDGCHC	4 cut(s)	527, 558, 722, 748
Bsp143I	GATC	6 cut(s)	141, 157, 182, 435, 474, 681
BspACI	CCGC	4 cut(s)	135, 138, 568, 722
BspANI	GGCC	2 cut(s)	348, 848
BspCNI	CTCAG	3 cut(s)	598, 760, 792
BspDI	ATCGAT	2 cut(s)	486, 684
BspFNI	CGCG	1 cut(s)	140
BspLI	GGNNCC	6 cut(s)	331, 342, 422, 524, 555, 842
BspMI	ACCTGC	1 cut(s)	918
BspT107I	GGYRCC	2 cut(s)	420, 522
BsrBI	CCGCTC	1 cut(s)	570
BsrDI	GCAATG	1 cut(s)	618
BsrFI	RCCGGY	2 cut(s)	89, 580
BsrI	ACTGG	2 cut(s)	349, 866
BssAI	RCCGGY	2 cut(s)	89, 580
BssECI	CCNNGG	2 cut(s)	416, 533
BssMI	GATC	6 cut(s)	141, 157, 182, 435, 474, 681
Bst2UI	CCWGG	2 cut(s)	417, 845
Bst4CI	ACNGT	1 cut(s)	64
BstBAI	YACGTR	1 cut(s)	454
BstC8I	GCNNGC	3 cut(s)	91, 582, 722
BstDEI	CTNAG	3 cut(s)	585, 747, 800
BstF5I	GGATG	3 cut(s)	323, 780, 814
BstFNI	CGCG	1 cut(s)	140
BstH2I	RGCGCY	1 cut(s)	96
BstHHI	GCGC	2 cut(s)	95, 404
BstKTI	GATC	6 cut(s)	144, 160, 185, 438, 477, 684
BstMAI	GTCTC	1 cut(s)	240
BstMBI	GATC	6 cut(s)	141, 157, 182, 435, 474, 681
BstMCI	CGRYCG	3 cut(s)	144, 160, 438
BstMWI	GCNNNNNNNGC	3 cut(s)	143, 401, 721
BstNI	CCWGG	2 cut(s)	417, 845
BstNSI	RCATGY	2 cut(s)	770, 886
BstSCI	CCNGG	5 cut(s)	326, 343, 415, 532, 843
BstSLI	GKGCMC	2 cut(s)	527, 722
BstUI	CGCG	1 cut(s)	140
BstV1I	GCAGC	2 cut(s)	795, 866
Bsu15I	ATCGAT	2 cut(s)	486, 684
BsuRI	GGCC	2 cut(s)	348, 848
BsuTUI	ATCGAT	2 cut(s)	486, 684
BtsCI	GGATG	3 cut(s)	323, 780, 814
BtsI	GCAGTG	2 cut(s)	630, 722
BtsIMutI	CAGTG	3 cut(s)	630, 722, 755
BveI	ACCTGC	1 cut(s)	918
Cac8I	GCNNGC	3 cut(s)	91, 582, 722
CaiI	CAGNNNCTG	1 cut(s)	799
CfoI	GCGC	2 cut(s)	95, 404
Cfr10I	RCCGGY	2 cut(s)	89, 580
Cfr13I	GGNCC	2 cut(s)	330, 847
ClaI	ATCGAT	2 cut(s)	486, 684
Csp6I	GTAC	4 cut(s)	206, 421, 562, 962
CspCI	CAANNNNNGTGG	2 cut(s)	440, 475
CviAII	CATG	3 cut(s)	767, 883, 919
CviQI	GTAC	4 cut(s)	206, 421, 562, 962
DdeI	CTNAG	3 cut(s)	585, 747, 800
DpnI	GATC	6 cut(s)	143, 159, 184, 437, 476, 683
DpnII	GATC	6 cut(s)	141, 157, 182, 435, 474, 681
EaeI	YGGCCR	1 cut(s)	346
EciI	GGCGGA	1 cut(s)	124
Eco24I	GRGCYC	1 cut(s)	558
Eco47I	GGWCC	1 cut(s)	330
Eco72I	CACGTG	1 cut(s)	454
Eco88I	CYCGRG	1 cut(s)	557
EcoRII	CCWGG	2 cut(s)	415, 843
EcoT22I	ATGCAT	1 cut(s)	943
EcoT38I	GRGCYC	1 cut(s)	558
Esp3I	CGTCTC	1 cut(s)	240
FaeI	CATG	3 cut(s)	770, 886, 922
FaiI	YATR	9 cut(s)	658, 768, 833, 884, 891, 920, 939, 978, 996
FaqI	GGGAC	1 cut(s)	858
FatI	CATG	3 cut(s)	766, 882, 918
FauI	CCCGC	1 cut(s)	729
FbaI	TGATCA	1 cut(s)	474
FblI	GTMKAC	1 cut(s)	66
Fnu4HI	GCNGC	4 cut(s)	138, 568, 784, 880
FokI	GGATG	3 cut(s)	310, 787, 821
FriOI	GRGCYC	1 cut(s)	558
Fsp4HI	GCNGC	4 cut(s)	138, 568, 784, 880
GlaI	GCGC	2 cut(s)	94, 403
GluI	GCNGC	4 cut(s)	138, 568, 784, 880
GsaI	CCCAGC	1 cut(s)	879
GsuI	CTGGAG	2 cut(s)	572, 883
HaeII	RGCGCY	1 cut(s)	96
HaeIII	GGCC	2 cut(s)	348, 848
HapII	CCGG	5 cut(s)	90, 327, 345, 533, 581
HhaI	GCGC	2 cut(s)	95, 404
Hin1II	CATG	3 cut(s)	770, 886, 922
Hin6I	GCGC	2 cut(s)	93, 402
HinP1I	GCGC	2 cut(s)	93, 402
HincII	GTYRAC	1 cut(s)	67
HindII	GTYRAC	1 cut(s)	67
HinfI	GANTC	6 cut(s)	115, 259, 265, 273, 362, 710
HpaII	CCGG	5 cut(s)	90, 327, 345, 533, 581
HphI	GGTGA	3 cut(s)	52, 361, 715
Hpy166II	GTNNAC	3 cut(s)	67, 151, 321
Hpy188III	TCNNGA	3 cut(s)	439, 662, 772
Hpy8I	GTNNAC	3 cut(s)	67, 151, 321
HpyCH4III	ACNGT	1 cut(s)	64
HpyCH4IV	ACGT	2 cut(s)	99, 453
HpyCH4V	TGCA	8 cut(s)	447, 540, 623, 753, 783, 882, 927, 941
HpyF10VI	GCNNNNNNNGC	3 cut(s)	143, 401, 721
HpyF3I	CTNAG	3 cut(s)	585, 747, 800
HpySE526I	ACGT	2 cut(s)	99, 453
Hsp92II	CATG	3 cut(s)	770, 886, 922
HspAI	GCGC	2 cut(s)	93, 402
KpnI	GGTACC	1 cut(s)	424
KroI	GCCGGC	2 cut(s)	89, 580
KroNI	GCCGGC	2 cut(s)	91, 582
Ksp22I	TGATCA	1 cut(s)	474
Kzo9I	GATC	6 cut(s)	141, 157, 182, 435, 474, 681
LmnI	GCTCC	5 cut(s)	131, 467, 501, 553, 917
Lsp1109I	GCAGC	2 cut(s)	795, 866
LweI	GCATC	3 cut(s)	76, 610, 914
MaeII	ACGT	2 cut(s)	99, 453
MaeIII	GTNAC	1 cut(s)	947
MalI	GATC	6 cut(s)	143, 159, 184, 437, 476, 683
MbiI	CCGCTC	1 cut(s)	570
MboI	GATC	6 cut(s)	141, 157, 182, 435, 474, 681
MboII	GAAGA	3 cut(s)	97, 318, 836
MfeI	CAATTG	1 cut(s)	952
MhlI	GDGCHC	4 cut(s)	527, 558, 722, 748
MluCI	AATT	6 cut(s)	48, 54, 442, 516, 644, 952
MlyI	GAGTC	1 cut(s)	719
MmeI	TCCRAC	2 cut(s)	252, 618
Mph1103I	ATGCAT	1 cut(s)	943
MroNI	GCCGGC	2 cut(s)	89, 580
MslI	CAYNNNNRTG	1 cut(s)	388
MspA1I	CMGCKG	1 cut(s)	879
MspI	CCGG	5 cut(s)	90, 327, 345, 533, 581
MspR9I	CCNGG	5 cut(s)	328, 345, 417, 534, 845
MunI	CAATTG	1 cut(s)	952
Mva1269I	GAATGC	1 cut(s)	941
MvaI	CCWGG	2 cut(s)	417, 845
MvnI	CGCG	1 cut(s)	140
MwoI	GCNNNNNNNGC	3 cut(s)	143, 401, 721
NaeI	GCCGGC	2 cut(s)	91, 582
NciI	CCSGG	3 cut(s)	328, 345, 534
NdeII	GATC	6 cut(s)	141, 157, 182, 435, 474, 681
NgoMIV	GCCGGC	2 cut(s)	89, 580
NlaIII	CATG	3 cut(s)	770, 886, 922
NlaIV	GGNNCC	6 cut(s)	331, 342, 422, 524, 555, 842
NsiI	ATGCAT	1 cut(s)	943
NspI	RCATGY	2 cut(s)	770, 886
PaqCI	CACCTGC	1 cut(s)	918
PctI	GAATGC	1 cut(s)	941
PdiI	GCCGGC	2 cut(s)	91, 582
PfeI	GAWTC	5 cut(s)	115, 259, 265, 273, 362
PkrI	GCNGC	4 cut(s)	139, 569, 785, 881
Ple19I	CGATCG	3 cut(s)	144, 160, 438
PleI	GAGTC	1 cut(s)	718
PmaCI	CACGTG	1 cut(s)	454
PmlI	CACGTG	1 cut(s)	454
PpsI	GAGTC	1 cut(s)	718
Ppu21I	YACGTR	1 cut(s)	454
Psp6I	CCWGG	2 cut(s)	415, 843
PspCI	CACGTG	1 cut(s)	454
PspFI	CCCAGC	1 cut(s)	875
PspGI	CCWGG	2 cut(s)	415, 843
PspN4I	GGNNCC	6 cut(s)	331, 342, 422, 524, 555, 842
PspPI	GGNCC	2 cut(s)	330, 847
PstNI	CAGNNNCTG	1 cut(s)	799
PvuI	CGATCG	3 cut(s)	144, 160, 438
PvuII	CAGCTG	1 cut(s)	879
RgaI	GCGATCGC	1 cut(s)	144
RsaI	GTAC	4 cut(s)	207, 422, 563, 963
RsaNI	GTAC	4 cut(s)	206, 421, 562, 962
RseI	CAYNNNNRTG	1 cut(s)	388
SalI	GTCGAC	1 cut(s)	65
SatI	GCNGC	4 cut(s)	138, 568, 784, 880
Sau3AI	GATC	6 cut(s)	141, 157, 182, 435, 474, 681
Sau96I	GGNCC	2 cut(s)	330, 847
ScaI	AGTACT	1 cut(s)	563
SchI	GAGTC	1 cut(s)	719
ScrFI	CCNGG	5 cut(s)	328, 345, 417, 534, 845
SduI	GDGCHC	4 cut(s)	527, 558, 722, 748
SfaAI	GCGATCGC	1 cut(s)	144
SfaNI	GCATC	3 cut(s)	76, 610, 914
SgfI	GCGATCGC	1 cut(s)	144
SgrDI	CGTCGACG	1 cut(s)	65
SinI	GGWCC	1 cut(s)	330
SmiMI	CAYNNNNRTG	1 cut(s)	388
Sse9I	AATT	6 cut(s)	48, 54, 442, 516, 644, 952
SsiI	CCGC	4 cut(s)	135, 138, 568, 722
StyD4I	CCNGG	5 cut(s)	326, 343, 415, 532, 843
TaaI	ACNGT	1 cut(s)	64
TaiI	ACGT	2 cut(s)	102, 456
TaqI	TCGA	8 cut(s)	66, 160, 219, 438, 486, 684, 894, 985
TasI	AATT	6 cut(s)	48, 54, 442, 516, 644, 952
TatI	WGTACW	2 cut(s)	561, 961
TauI	GCSGC	2 cut(s)	140, 570
TfiI	GAWTC	5 cut(s)	115, 259, 265, 273, 362
TscAI	CASTG	3 cut(s)	630, 722, 755
TseI	GCWGC	2 cut(s)	783, 879
TspDTI	ATGAA	1 cut(s)	837
TspGWI	ACGGA	2 cut(s)	258, 322
TspRI	CASTG	3 cut(s)	630, 722, 755
VpaK11BI	GGWCC	1 cut(s)	330
XapI	RAATTY	2 cut(s)	54, 644
XceI	RCATGY	2 cut(s)	770, 886
XmiI	GTMKAC	1 cut(s)	66
ZrmI	AGTACT	1 cut(s)	563
Zsp2I	ATGCAT	1 cut(s)	943

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.