E3 ubiquitin-protein ligase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 456 |
| Acc16I | TGCGCA | 1 cut(s) | 265 |
| Acc36I | ACCTGC | 1 cut(s) | 456 |
| AccB1I | GGYRCC | 1 cut(s) | 408 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 419 |
| AccIII | TCCGGA | 1 cut(s) | 192 |
| AciI | CCGC | 3 cut(s) | 138, 471, 589 |
| AclWI | GGATC | 3 cut(s) | 303, 431, 642 |
| AcsI | RAATTY | 3 cut(s) | 33, 104, 705 |
| AfaI | GTAC | 1 cut(s) | 575 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 419, 518, 691 |
| AgsI | TTSAA | 3 cut(s) | 92, 152, 484 |
| AluBI | AGCT | 1 cut(s) | 617 |
| AluI | AGCT | 1 cut(s) | 617 |
| Alw26I | GTCTC | 3 cut(s) | 276, 279, 660 |
| AlwI | GGATC | 3 cut(s) | 303, 431, 642 |
| Aor13HI | TCCGGA | 1 cut(s) | 192 |
| ApeKI | GCWGC | 1 cut(s) | 447 |
| ApoI | RAATTY | 3 cut(s) | 33, 104, 705 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 493, 525 |
| AspLEI | GCGC | 2 cut(s) | 9, 266 |
| AspS9I | GGNCC | 1 cut(s) | 592 |
| AsuC2I | CCSGG | 3 cut(s) | 72, 325, 713 |
| AvaII | GGWCC | 1 cut(s) | 592 |
| BaeGI | GKGCMC | 3 cut(s) | 71, 254, 413 |
| BanI | GGYRCC | 1 cut(s) | 408 |
| BbvI | GCAGC | 1 cut(s) | 434 |
| BccI | CCATC | 4 cut(s) | 164, 685, 714, 721 |
| BcnI | CCSGG | 3 cut(s) | 72, 325, 713 |
| BcoDI | GTCTC | 3 cut(s) | 276, 279, 660 |
| BfuAI | ACCTGC | 1 cut(s) | 456 |
| BisI | GCNGC | 1 cut(s) | 448 |
| BlsI | GCNGC | 1 cut(s) | 449 |
| Bme1390I | CCNGG | 3 cut(s) | 72, 325, 713 |
| Bme18I | GGWCC | 1 cut(s) | 592 |
| BmgT120I | GGNCC | 1 cut(s) | 592 |
| BmiI | GGNNCC | 5 cut(s) | 312, 410, 593, 603, 696 |
| BmrFI | CCNGG | 3 cut(s) | 72, 325, 713 |
| BmsI | GCATC | 1 cut(s) | 125 |
| BpmI | CTGGAG | 1 cut(s) | 421 |
| BpuMI | CCSGG | 3 cut(s) | 72, 325, 713 |
| BsaAI | YACGTR | 1 cut(s) | 430 |
| BsaJI | CCNNGG | 5 cut(s) | 70, 314, 413, 546, 595 |
| BsaWI | WCCGGW | 1 cut(s) | 192 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 419, 518, 691 |
| Bse1I | ACTGG | 1 cut(s) | 404 |
| Bse3DI | GCAATG | 1 cut(s) | 273 |
| BseAI | TCCGGA | 1 cut(s) | 192 |
| BseDI | CCNNGG | 5 cut(s) | 70, 314, 413, 546, 595 |
| BseGI | GGATG | 2 cut(s) | 175, 367 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 419, 518, 691 |
| BseMI | GCAATG | 1 cut(s) | 273 |
| BseNI | ACTGG | 1 cut(s) | 404 |
| BseSI | GKGCMC | 3 cut(s) | 71, 254, 413 |
| BseXI | GCAGC | 1 cut(s) | 434 |
| BsgI | GTGCAG | 1 cut(s) | 433 |
| BshNI | GGYRCC | 1 cut(s) | 408 |
| BsiSI | CCGG | 4 cut(s) | 72, 193, 324, 713 |
| BslFI | GGGAC | 2 cut(s) | 487, 605 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 419, 518, 691 |
| BsmAI | GTCTC | 3 cut(s) | 276, 279, 660 |
| BsmFI | GGGAC | 2 cut(s) | 487, 605 |
| BsmI | GAATGC | 1 cut(s) | 148 |
| Bsp1286I | GDGCHC | 3 cut(s) | 71, 254, 413 |
| Bsp13I | TCCGGA | 1 cut(s) | 192 |
| Bsp143I | GATC | 4 cut(s) | 295, 423, 437, 647 |
| Bsp19I | CCATGG | 1 cut(s) | 546 |
| BspACI | CCGC | 3 cut(s) | 138, 471, 589 |
| BspEI | TCCGGA | 1 cut(s) | 192 |
| BspHI | TCATGA | 2 cut(s) | 157, 564 |
| BspLI | GGNNCC | 5 cut(s) | 312, 410, 593, 603, 696 |
| BspMI | ACCTGC | 1 cut(s) | 456 |
| BspPI | GGATC | 3 cut(s) | 303, 431, 642 |
| BspT107I | GGYRCC | 1 cut(s) | 408 |
| BsrDI | GCAATG | 1 cut(s) | 273 |
| BsrI | ACTGG | 1 cut(s) | 404 |
| BssECI | CCNNGG | 5 cut(s) | 70, 314, 413, 546, 595 |
| BssMI | GATC | 4 cut(s) | 295, 423, 437, 647 |
| BssT1I | CCWWGG | 3 cut(s) | 314, 413, 546 |
| Bst4CI | ACNGT | 2 cut(s) | 66, 249 |
| BstBAI | YACGTR | 1 cut(s) | 430 |
| BstC8I | GCNNGC | 1 cut(s) | 321 |
| BstDSI | CCRYGG | 1 cut(s) | 546 |
| BstF5I | GGATG | 2 cut(s) | 175, 367 |
| BstHHI | GCGC | 2 cut(s) | 9, 266 |
| BstKTI | GATC | 4 cut(s) | 298, 426, 440, 650 |
| BstMAI | GTCTC | 3 cut(s) | 276, 279, 660 |
| BstMBI | GATC | 4 cut(s) | 295, 423, 437, 647 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 629 |
| BstSCI | CCNGG | 3 cut(s) | 70, 323, 711 |
| BstSLI | GKGCMC | 3 cut(s) | 71, 254, 413 |
| BstV1I | GCAGC | 1 cut(s) | 434 |
| BstX2I | RGATCY | 2 cut(s) | 423, 647 |
| BstYI | RGATCY | 2 cut(s) | 423, 647 |
| BtgI | CCRYGG | 1 cut(s) | 546 |
| BtgZI | GCGATG | 1 cut(s) | 733 |
| BtsCI | GGATG | 2 cut(s) | 175, 367 |
| BtsIMutI | CAGTG | 3 cut(s) | 71, 254, 397 |
| BveI | ACCTGC | 1 cut(s) | 456 |
| Cac8I | GCNNGC | 1 cut(s) | 321 |
| CciI | TCATGA | 2 cut(s) | 157, 564 |
| CfoI | GCGC | 2 cut(s) | 9, 266 |
| Cfr13I | GGNCC | 1 cut(s) | 592 |
| Csp6I | GTAC | 1 cut(s) | 574 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 33 |
| CviAII | CATG | 4 cut(s) | 158, 547, 565, 652 |
| CviJI | RGCY | 6 cut(s) | 220, 352, 447, 552, 617, 673 |
| CviKI_1 | RGCY | 6 cut(s) | 220, 352, 447, 552, 617, 673 |
| CviQI | GTAC | 1 cut(s) | 574 |
| DpnI | GATC | 4 cut(s) | 297, 425, 439, 649 |
| DpnII | GATC | 4 cut(s) | 295, 423, 437, 647 |
| Eco130I | CCWWGG | 3 cut(s) | 314, 413, 546 |
| Eco32I | GATATC | 1 cut(s) | 367 |
| Eco47I | GGWCC | 1 cut(s) | 592 |
| EcoRV | GATATC | 1 cut(s) | 367 |
| EcoT14I | CCWWGG | 3 cut(s) | 314, 413, 546 |
| EcoT22I | ATGCAT | 1 cut(s) | 148 |
| ErhI | CCWWGG | 3 cut(s) | 314, 413, 546 |
| FaeI | CATG | 4 cut(s) | 161, 550, 568, 655 |
| FaqI | GGGAC | 2 cut(s) | 487, 605 |
| FatI | CATG | 4 cut(s) | 157, 546, 564, 651 |
| FauI | CCCGC | 3 cut(s) | 131, 464, 582 |
| Fnu4HI | GCNGC | 1 cut(s) | 448 |
| FokI | GGATG | 2 cut(s) | 182, 374 |
| Fsp4HI | GCNGC | 1 cut(s) | 448 |
| FspI | TGCGCA | 1 cut(s) | 265 |
| GlaI | GCGC | 2 cut(s) | 8, 265 |
| GluI | GCNGC | 1 cut(s) | 448 |
| GsuI | CTGGAG | 1 cut(s) | 421 |
| HapII | CCGG | 4 cut(s) | 72, 193, 324, 713 |
| HhaI | GCGC | 2 cut(s) | 9, 266 |
| Hin1II | CATG | 4 cut(s) | 161, 550, 568, 655 |
| Hin6I | GCGC | 2 cut(s) | 7, 264 |
| HinP1I | GCGC | 2 cut(s) | 7, 264 |
| HinfI | GANTC | 4 cut(s) | 112, 185, 196, 583 |
| HpaII | CCGG | 4 cut(s) | 72, 193, 324, 713 |
| Hpy166II | GTNNAC | 1 cut(s) | 497 |
| Hpy188I | TCNGA | 2 cut(s) | 111, 664 |
| Hpy8I | GTNNAC | 1 cut(s) | 497 |
| HpyAV | CCTTC | 5 cut(s) | 399, 562, 573, 669, 734 |
| HpyCH4III | ACNGT | 2 cut(s) | 66, 249 |
| HpyCH4IV | ACGT | 1 cut(s) | 429 |
| HpyCH4V | TGCA | 3 cut(s) | 146, 450, 465 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 629 |
| HpySE526I | ACGT | 1 cut(s) | 429 |
| Hsp92II | CATG | 4 cut(s) | 161, 550, 568, 655 |
| HspAI | GCGC | 2 cut(s) | 7, 264 |
| Kpn2I | TCCGGA | 1 cut(s) | 192 |
| Kzo9I | GATC | 4 cut(s) | 295, 423, 437, 647 |
| LmnI | GCTCC | 3 cut(s) | 4, 40, 126 |
| Lsp1109I | GCAGC | 1 cut(s) | 434 |
| LweI | GCATC | 1 cut(s) | 125 |
| MaeII | ACGT | 1 cut(s) | 429 |
| MalI | GATC | 4 cut(s) | 297, 425, 439, 649 |
| MboI | GATC | 4 cut(s) | 295, 423, 437, 647 |
| MboII | GAAGA | 2 cut(s) | 547, 736 |
| MflI | RGATCY | 2 cut(s) | 423, 647 |
| MhlI | GDGCHC | 3 cut(s) | 71, 254, 413 |
| MluCI | AATT | 6 cut(s) | 33, 104, 161, 200, 538, 705 |
| MnlI | CCTC | 5 cut(s) | 36, 231, 342, 437, 590 |
| Mph1103I | ATGCAT | 1 cut(s) | 148 |
| MroI | TCCGGA | 1 cut(s) | 192 |
| MseI | TTAA | 2 cut(s) | 177, 345 |
| MslI | CAYNNNNRTG | 1 cut(s) | 455 |
| MspA1I | CMGCKG | 1 cut(s) | 589 |
| MspI | CCGG | 4 cut(s) | 72, 193, 324, 713 |
| MspR9I | CCNGG | 3 cut(s) | 72, 325, 713 |
| Mva1269I | GAATGC | 1 cut(s) | 148 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 629 |
| NciI | CCSGG | 3 cut(s) | 72, 325, 713 |
| NcoI | CCATGG | 1 cut(s) | 546 |
| NdeII | GATC | 4 cut(s) | 295, 423, 437, 647 |
| NlaIII | CATG | 4 cut(s) | 161, 550, 568, 655 |
| NlaIV | GGNNCC | 5 cut(s) | 312, 410, 593, 603, 696 |
| NmeAIII | GCCGAG | 1 cut(s) | 364 |
| NsbI | TGCGCA | 1 cut(s) | 265 |
| NsiI | ATGCAT | 1 cut(s) | 148 |
| PagI | TCATGA | 2 cut(s) | 157, 564 |
| PaqCI | CACCTGC | 1 cut(s) | 456 |
| PctI | GAATGC | 1 cut(s) | 148 |
| PfeI | GAWTC | 4 cut(s) | 112, 185, 196, 583 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 419 |
| PkrI | GCNGC | 1 cut(s) | 449 |
| Ppu21I | YACGTR | 1 cut(s) | 430 |
| PspN4I | GGNNCC | 5 cut(s) | 312, 410, 593, 603, 696 |
| PspPI | GGNCC | 1 cut(s) | 592 |
| PsuI | RGATCY | 2 cut(s) | 423, 647 |
| RsaI | GTAC | 1 cut(s) | 575 |
| RsaNI | GTAC | 1 cut(s) | 574 |
| RseI | CAYNNNNRTG | 1 cut(s) | 455 |
| SaqAI | TTAA | 2 cut(s) | 177, 345 |
| SatI | GCNGC | 1 cut(s) | 448 |
| Sau3AI | GATC | 4 cut(s) | 295, 423, 437, 647 |
| Sau96I | GGNCC | 1 cut(s) | 592 |
| ScrFI | CCNGG | 3 cut(s) | 72, 325, 713 |
| SduI | GDGCHC | 3 cut(s) | 71, 254, 413 |
| SetI | ASST | 5 cut(s) | 410, 419, 432, 470, 619 |
| SfaNI | GCATC | 1 cut(s) | 125 |
| SinI | GGWCC | 1 cut(s) | 592 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 455 |
| Sse9I | AATT | 6 cut(s) | 33, 104, 161, 200, 538, 705 |
| SsiI | CCGC | 3 cut(s) | 138, 471, 589 |
| StyD4I | CCNGG | 3 cut(s) | 70, 323, 711 |
| StyI | CCWWGG | 3 cut(s) | 314, 413, 546 |
| TaaI | ACNGT | 2 cut(s) | 66, 249 |
| TaiI | ACGT | 1 cut(s) | 432 |
| TaqII | GACCGA | 1 cut(s) | 609 |
| TasI | AATT | 6 cut(s) | 33, 104, 161, 200, 538, 705 |
| TatI | WGTACW | 1 cut(s) | 573 |
| TfiI | GAWTC | 4 cut(s) | 112, 185, 196, 583 |
| Tru1I | TTAA | 2 cut(s) | 177, 345 |
| Tru9I | TTAA | 2 cut(s) | 177, 345 |
| TscAI | CASTG | 3 cut(s) | 71, 254, 404 |
| TseI | GCWGC | 1 cut(s) | 447 |
| TspDTI | ATGAA | 5 cut(s) | 146, 174, 473, 553, 581 |
| TspRI | CASTG | 3 cut(s) | 71, 254, 404 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 419 |
| VpaK11BI | GGWCC | 1 cut(s) | 592 |
| XapI | RAATTY | 3 cut(s) | 33, 104, 705 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 54, 237 |
| Zsp2I | ATGCAT | 1 cut(s) | 148 |