Rorug02G0401100

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000271
Physical Location & Seq
Forward (+)
51230629 .. 51233856
3228 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0401100.1

Sequence Viewer

Length: 1626 bp
ATGGTTCGGGCTCTCGAAGACGAAGAAGAGACTTACAAGAAAAGGTTGCACCATCTCAGGGAGATTCATGGGACCGCAGGCAGGCATGCCAAGAGCTTGAGCATTGAGACTTCAACAGCATTAGATTTTGAGGATGAAGATAGTGGGGATGGAAGTCAGACGCCTACTGAGCCCGATGCTAAAGGCCTCAAGCCAAGGCTGAGCACGGAGGAAGCCGCCACCGCTGCCATAGAAGCCCAAGAAAAGCAGAAGCAATCTGATATGGAACAGATGAGGGAGAGGTTTGCTAAATTGCTTTTGGGTGAAGATATGTCTGGCGGAGGAAAGGGCGTTTCTTCAGCTTTGGCATTGTCCAATGCCATCACAAACCTCGCCGCTTCTGTTTTTGGAGAGCAAACTCGCCTAGAGCCCATGTCTGCGGATAGGAAAGCAAGATGGAGAAAAGAAATAGATTGGTTGTTAAGTGTTACCGATTACATTGTTGAGTTTGTTGCTTCACAACAGAAGAACAAGGATGGATCCAATATGGAGATAATGGTGACCCGGCAACGGACAGATCTTCTCATGAACATTCCTGCCCTGAAAAAGCTTGATGCGATGCTTATTGACTGTCTAGATAACTTCAGAGGCGATCAGGAGTTCTATTATGTATCCAAAGATGCTGATGAGAAGGAGAAAGGGAATGCAAAGAGAAAAGATGACAAATGGTGGCTACCTACTCCTAAAGTTCCACCAGATGGCTTATCAGAAGCGGCAAGAAAATTCTTGCAGTATCAAAAAGATTGTGTCAACCAAGTGCTTAAAGCAGCCATGGCCATAAATGCTCAAGTTTTAACAGAAATGGAGATTCCCGAAAACTACATTGAATCCCTTCCCAAGAATGGGAGGGCAAGTCTTGGTGACCAAATCTATAGGAGTATTACAGTCGAATTCTTTGATCCGGACCAATTTCTTTGTGCCATGGACTTATCGTCTGACCACAAAATTCTAGACCTCAAAAACAAAATGGAGGCTTCCATGGTGATATGGAAGAGAAAGATGAACCAAAAAGATGGGAAATCTGGCTGGGGATCAGCTGTGAGTTTGGAAAAGAGAGAGCTCTTTGAAGAGAGAGCAGAGACCATCTTACTCCTTCTCAAGCAGAGGTTCCCTGGAATCCCTCAATCTTCATTGGACATAAGTAAAATTCAATACAACGCGGATGTGGGGCAGGCTATTCTCGAAAGCTATTCAAGAATACTAGAGAGCTTGGCCTTCACTGTGTTGTCTCGAATTGAAGATGTACTCTATGCAGATTACGCTGTGCATAATCCATTACAAGCAGTAAGTAAAAGGCACAATTTCATAGAAAAAACTACATCATCACCTACAACTTCTCCAGATAGGAGCATGCTAAAAGAAGATAATGGGGGAACAGAGACACCCACTTCGATGACATTGTCGGATTTCATGGGTTGGGGCTGTGATCAAGGTGACAGCGAGGCAAAGAAGGAACAAGAGGCTGCAGCAGAAGACGGTGAGGTCAAGCATCCACATATACAGAAATTAGCCAACATTGTGACCAACAAGAAGATTTCATATCTAGAGACTCTGGGTGGAATGAGAAGTCCAACAGCACGCCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IBR zf-RING_UBOX

Protein Analysis

541

Amino Acids

60.77

Weight (kDa)

5.37

Isoelectric Point (pI)

50.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PRONE PF03759 86 - 435 2.9e-174 PRONE (Plant-specific Rop nucleotide exchanger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000271)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14250
fragaria_vesca FvH4_1g09490 FvH4_1g09500 FvH4_1g09500 FvH4_1g09510 FvH4_3g00870 FvH4_3g03010 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g35700 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220
malus_domestica MD02G1102400.v1.1 MD02G1103700.v1.1 MD03G1111900.v1.1 MD09G1173800.v1.1 MD09G1230900.v1.1 MD09G1231400.v1.1 MD15G1224200.v1.1
prunus_persica Prupe.3G031900_v2.0.a1 Prupe.3G107200_v2.0.a1 Prupe.7G191200_v2.0.a1 Prupe.7G191800_v2.0.a1 Prupe.8G007700_v2.0.a1
pyrus_communis pycom02g08010 pycom02g08140 pycom09g14980 pycom09g15030 pycom15g19900
rosa_chinensis RchiOBHm_Chr2g0096041 RchiOBHm_Chr2g0096051 RchiOBHm_Chr2g0096061 RchiOBHm_Chr2g0096071 RchiOBHm_Chr2g0096081 RchiOBHm_Chr2g0096221 RchiOBHm_Chr2g0131511 RchiOBHm_Chr2g0147691 RchiOBHm_Chr5g0001281 RchiOBHm_Chr5g0001301
rosa_laevigata RLG00000016619 RLG00000016620 RLG00000016621 RLG00000016622 RLG00000019200 RLG00000020271 RLG00000025410 RLG00000030919 RLG00000031102 RLG00000031117 RLG00000031119 RLG00000031120
rosa_multiflora Rmu_co8160592.1_g000001 Rmu_sc0001706.1_g000008 Rmu_sc0002494.1_g000005 Rmu_sc0004189.1_g000040 Rmu_sc0005612.1_g000008 Rmu_sc0005612.1_g000011 Rmu_sc0005612.1_g000012 Rmu_sc0006926.1_g000015 Rmu_sc0013257.1_g000002 Rmu_sc0034363.1_g000001 Rmu_sc0034363.1_g000002
rosa_roxburghii Rroxscaffold_1G00072690 Rroxscaffold_1G00075020 Rroxscaffold_2G00145780 Rroxscaffold_2G00145790 Rroxscaffold_2G00145800 Rroxscaffold_2G00145810 Rroxscaffold_2G00145820 Rroxscaffold_2G00145830 Rroxscaffold_4G00300930 Rroxscaffold_6G00424750
rosa_rugosa Rorug02G0056000 Rorug02G0056100 Rorug02G0056200 Rorug02G0056300 Rorug02G0056500 Rorug02G0056700 Rorug02G0298000.1 Rorug02G0400900 Rorug02G0401000 Rorug02G0401100 Rorug04G0389500 Rorug04G0389600 Rorug04G0389700 Rorug04G0402300
rosa_samantha Rh2AG103800 Rh2AG458300 Rh2BG105400 Rh2BG105500 Rh2BG105600 Rh2BG105700 Rh2BG105900 Rh2BG357600 Rh2BG471000 Rh2DG106000 Rh2DG106100 Rh2DG106200 Rh2DG106300 Rh2DG106500 Rh2DG375400 Rh2DG480300 Rh5AG009500 Rh5AG009600 Rh5AG010000 Rh5AG028300 Rh5BG012400 Rh5BG012500 Rh5BG012700 Rh5BG028500
rosa_wichuraiana Rw2G007950 Rw2G007960 Rw2G007970 Rw2G028490 Rw5G000980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1520
AccB7I CCANNNNNTGG 1 cut(s) 737
AccII CGCG 1 cut(s) 1199
AccIII TCCGGA 1 cut(s) 940
AciI CCGC 8 cut(s) 75, 216, 222, 318, 375, 419, 752, 1199
AclWI GGATC 4 cut(s) 513, 526, 932, 1078
AcoI YGGCCR 1 cut(s) 813
AcsI RAATTY 4 cut(s) 761, 929, 984, 1185
AcuI CTGAAG 2 cut(s) 321, 607
AcyI GRCGYC 1 cut(s) 161
AfaI GTAC 1 cut(s) 1284
AfiI CCNNNNNNNGG 6 cut(s) 58, 81, 549, 737, 881, 882
AgsI TTSAA 6 cut(s) 114, 866, 1106, 1190, 1233, 1277
AhdI GACNNNNNGTC 1 cut(s) 970
AjnI CCWGG 1 cut(s) 1150
AluBI AGCT 7 cut(s) 96, 341, 589, 1076, 1099, 1227, 1248
AluI AGCT 7 cut(s) 96, 341, 589, 1076, 1099, 1227, 1248
Alw21I GWGCWC 2 cut(s) 206, 1101
Alw26I GTCTC 6 cut(s) 23, 101, 1112, 1272, 1412, 1580
AlwI GGATC 4 cut(s) 513, 526, 932, 1078
Aor13HI TCCGGA 1 cut(s) 940
AoxI GGCC 3 cut(s) 184, 813, 1251
ApeKI GCWGC 4 cut(s) 224, 806, 1502, 1505
ApoI RAATTY 4 cut(s) 761, 929, 984, 1185
ArsI GACNNNNNNTTYG 2 cut(s) 1411, 1443
Asp700I GAANNNNTTC 1 cut(s) 870
AspS9I GGNCC 2 cut(s) 72, 943
AsuC2I CCSGG 1 cut(s) 544
AsuHPI GGTGA 7 cut(s) 314, 550, 911, 1033, 1356, 1484, 1529
AvaII GGWCC 2 cut(s) 72, 943
BalI TGGCCA 1 cut(s) 815
BamHI GGATCC 1 cut(s) 518
BanII GRGCYC 4 cut(s) 13, 174, 411, 1101
BbsI GAAGAC 2 cut(s) 24, 1518
Bbv12I GWGCWC 2 cut(s) 206, 1101
BbvI GCAGC 4 cut(s) 211, 818, 1489, 1517
BccI CCATC 8 cut(s) 60, 143, 368, 429, 509, 731, 1046, 1130
BciT130I CCWGG 1 cut(s) 1152
BciVI GTATCC 1 cut(s) 661
BclI TGATCA 1 cut(s) 1465
BcnI CCSGG 1 cut(s) 544
BcoDI GTCTC 6 cut(s) 23, 101, 1112, 1272, 1412, 1580
BfaI CTAG 5 cut(s) 404, 614, 989, 1241, 1583
BfmI CTRYAG 2 cut(s) 910, 1503
BfuI GTATCC 1 cut(s) 661
BglII AGATCT 1 cut(s) 556
BisI GCNGC 7 cut(s) 216, 225, 375, 753, 807, 1503, 1506
BlpI GCTNAGC 1 cut(s) 200
BlsI GCNGC 7 cut(s) 217, 226, 376, 754, 808, 1504, 1507
Bme1390I CCNGG 2 cut(s) 544, 1152
Bme18I GGWCC 2 cut(s) 72, 943
BmeRI GACNNNNNGTC 1 cut(s) 970
BmgT120I GGNCC 2 cut(s) 72, 943
BmiI GGNNCC 3 cut(s) 73, 520, 1148
BmrFI CCNGG 2 cut(s) 544, 1152
BmsI GCATC 5 cut(s) 166, 583, 588, 649, 1537
BpiI GAAGAC 2 cut(s) 24, 1518
BpmI CTGGAG 1 cut(s) 1362
Bpu1102I GCTNAGC 1 cut(s) 200
BpuEI CTTGAG 4 cut(s) 118, 173, 810, 1121
BpuMI CCSGG 1 cut(s) 544
BsaHI GRCGYC 1 cut(s) 161
BsaI GGTCTC 1 cut(s) 1112
BsaJI CCNNGG 5 cut(s) 194, 810, 960, 1017, 1150
BsaWI WCCGGW 1 cut(s) 940
BsaXI ACNNNNNCTCC 4 cut(s) 877, 907, 1360, 1390
Bsc4I CCNNNNNNNGG 6 cut(s) 58, 81, 549, 737, 881, 882
BseAI TCCGGA 1 cut(s) 940
BseBI CCWGG 1 cut(s) 1152
BseDI CCNNGG 5 cut(s) 194, 810, 960, 1017, 1150
BseGI GGATG 5 cut(s) 139, 154, 520, 1207, 1528
BseLI CCNNNNNNNGG 6 cut(s) 58, 81, 549, 737, 881, 882
BseMII CTCAG 3 cut(s) 70, 159, 191
BseXI GCAGC 4 cut(s) 211, 818, 1489, 1517
BseYI CCCAGC 1 cut(s) 1065
Bsh1236I CGCG 1 cut(s) 1199
BshFI GGCC 3 cut(s) 186, 815, 1253
BsiHKAI GWGCWC 2 cut(s) 206, 1101
BsiSI CCGG 2 cut(s) 544, 941
BslFI GGGAC 1 cut(s) 85
BslI CCNNNNNNNGG 6 cut(s) 58, 81, 549, 737, 881, 882
BsmAI GTCTC 6 cut(s) 23, 101, 1112, 1272, 1412, 1580
BsmFI GGGAC 1 cut(s) 85
BsmI GAATGC 1 cut(s) 688
BsnI GGCC 3 cut(s) 186, 815, 1253
Bso31I GGTCTC 1 cut(s) 1112
Bsp1286I GDGCHC 5 cut(s) 13, 174, 206, 411, 1101
Bsp13I TCCGGA 1 cut(s) 940
Bsp143I GATC 6 cut(s) 518, 556, 631, 937, 1070, 1465
Bsp1720I GCTNAGC 1 cut(s) 200
Bsp19I CCATGG 3 cut(s) 810, 960, 1017
BspACI CCGC 8 cut(s) 75, 216, 222, 318, 375, 419, 752, 1199
BspANI GGCC 3 cut(s) 186, 815, 1253
BspCNI CTCAG 3 cut(s) 69, 160, 192
BspEI TCCGGA 1 cut(s) 940
BspFNI CGCG 1 cut(s) 1199
BspHI TCATGA 1 cut(s) 564
BspLI GGNNCC 3 cut(s) 73, 520, 1148
BspMAI CTGCAG 1 cut(s) 1507
BspPI GGATC 4 cut(s) 513, 526, 932, 1078
BspTNI GGTCTC 1 cut(s) 1112
BssECI CCNNGG 5 cut(s) 194, 810, 960, 1017, 1150
BssMI GATC 6 cut(s) 518, 556, 631, 937, 1070, 1465
BssNI GRCGYC 1 cut(s) 161
BssT1I CCWWGG 4 cut(s) 194, 810, 960, 1017
Bst2UI CCWGG 1 cut(s) 1152
Bst4CI ACNGT 4 cut(s) 611, 925, 1261, 1517
Bst6I CTCTTC 3 cut(s) 21, 1025, 1101
BstACI GRCGYC 1 cut(s) 161
BstC8I GCNNGC 6 cut(s) 79, 83, 87, 1212, 1391, 1618
BstDEI CTNAG 3 cut(s) 56, 168, 200
BstDSI CCRYGG 3 cut(s) 810, 960, 1017
BstEII GGTNACC 2 cut(s) 538, 899
BstF5I GGATG 5 cut(s) 139, 154, 520, 1207, 1528
BstFNI CGCG 1 cut(s) 1199
BstKTI GATC 6 cut(s) 521, 559, 634, 940, 1073, 1468
BstMAI GTCTC 6 cut(s) 23, 101, 1112, 1272, 1412, 1580
BstMBI GATC 6 cut(s) 518, 556, 631, 937, 1070, 1465
BstMWI GCNNNNNNNGC 7 cut(s) 169, 221, 224, 233, 812, 821, 1298
BstNI CCWGG 1 cut(s) 1152
BstNSI RCATGY 2 cut(s) 89, 1393
BstPI GGTNACC 2 cut(s) 538, 899
BstSCI CCNGG 2 cut(s) 542, 1150
BstSFI CTRYAG 2 cut(s) 910, 1503
BstUI CGCG 1 cut(s) 1199
BstV1I GCAGC 4 cut(s) 211, 818, 1489, 1517
BstV2I GAAGAC 2 cut(s) 24, 1518
BstX2I RGATCY 2 cut(s) 518, 556
BstXI CCANNNNNNTGG 1 cut(s) 1052
BstYI RGATCY 2 cut(s) 518, 556
BsuI GTATCC 1 cut(s) 661
BsuRI GGCC 3 cut(s) 186, 815, 1253
BtgI CCRYGG 3 cut(s) 810, 960, 1017
BtgZI GCGATG 1 cut(s) 611
BtsCI GGATG 5 cut(s) 139, 154, 520, 1207, 1528
BtsIMutI CAGTG 1 cut(s) 1257
Cac8I GCNNGC 6 cut(s) 79, 83, 87, 1212, 1391, 1618
CciI TCATGA 1 cut(s) 564
Cfr13I GGNCC 2 cut(s) 72, 943
CseI GACGC 1 cut(s) 169
Csp6I GTAC 1 cut(s) 1283
CviAII CATG 9 cut(s) 68, 86, 412, 565, 811, 961, 1018, 1390, 1450
CviQI GTAC 1 cut(s) 1283
DdeI CTNAG 3 cut(s) 56, 168, 200
DpnI GATC 6 cut(s) 520, 558, 633, 939, 1072, 1467
DpnII GATC 6 cut(s) 518, 556, 631, 937, 1070, 1465
DrdI GACNNNNNNGTC 1 cut(s) 1520
DriI GACNNNNNGTC 1 cut(s) 970
DseDI GACNNNNNNGTC 1 cut(s) 1520
EaeI YGGCCR 1 cut(s) 813
Eam1104I CTCTTC 3 cut(s) 21, 1025, 1101
Eam1105I GACNNNNNGTC 1 cut(s) 970
EarI CTCTTC 3 cut(s) 21, 1025, 1101
EciI GGCGGA 1 cut(s) 333
Ecl136II GAGCTC 1 cut(s) 1099
Eco130I CCWWGG 4 cut(s) 194, 810, 960, 1017
Eco147I AGGCCT 1 cut(s) 186
Eco24I GRGCYC 4 cut(s) 13, 174, 411, 1101
Eco31I GGTCTC 1 cut(s) 1112
Eco47I GGWCC 2 cut(s) 72, 943
Eco53kI GAGCTC 1 cut(s) 1099
Eco57I CTGAAG 2 cut(s) 321, 607
Eco91I GGTNACC 2 cut(s) 538, 899
EcoICRI GAGCTC 1 cut(s) 1099
EcoO65I GGTNACC 2 cut(s) 538, 899
EcoRI GAATTC 1 cut(s) 929
EcoRII CCWGG 1 cut(s) 1150
EcoT14I CCWWGG 4 cut(s) 194, 810, 960, 1017
EcoT38I GRGCYC 4 cut(s) 13, 174, 411, 1101
ErhI CCWWGG 4 cut(s) 194, 810, 960, 1017
FaeI CATG 9 cut(s) 71, 89, 415, 568, 814, 964, 1021, 1393, 1453
FaqI GGGAC 1 cut(s) 85
FatI CATG 9 cut(s) 67, 85, 411, 564, 810, 960, 1017, 1389, 1449
FbaI TGATCA 1 cut(s) 1465
Fnu4HI GCNGC 7 cut(s) 216, 225, 375, 753, 807, 1503, 1506
FokI GGATG 5 cut(s) 146, 161, 527, 1214, 1515
FriOI GRGCYC 4 cut(s) 13, 174, 411, 1101
Fsp4HI GCNGC 7 cut(s) 216, 225, 375, 753, 807, 1503, 1506
FspBI CTAG 5 cut(s) 404, 614, 989, 1241, 1583
GluI GCNGC 7 cut(s) 216, 225, 375, 753, 807, 1503, 1506
GsaI CCCAGC 1 cut(s) 1069
GsuI CTGGAG 1 cut(s) 1362
HaeIII GGCC 3 cut(s) 186, 815, 1253
HapII CCGG 2 cut(s) 544, 941
HgaI GACGC 1 cut(s) 169
Hin1I GRCGYC 1 cut(s) 161
Hin1II CATG 9 cut(s) 71, 89, 415, 568, 814, 964, 1021, 1393, 1453
HincII GTYRAC 1 cut(s) 790
HindII GTYRAC 1 cut(s) 790
HindIII AAGCTT 1 cut(s) 587
HinfI GANTC 5 cut(s) 64, 847, 866, 1155, 1588
HpaII CCGG 2 cut(s) 544, 941
HphI GGTGA 7 cut(s) 314, 550, 911, 1033, 1356, 1484, 1529
Hpy166II GTNNAC 1 cut(s) 790
Hpy188I TCNGA 6 cut(s) 159, 259, 626, 748, 976, 1444
Hpy8I GTNNAC 1 cut(s) 790
HpyAV CCTTC 5 cut(s) 664, 881, 1142, 1264, 1483
HpyCH4III ACNGT 4 cut(s) 611, 925, 1261, 1517
HpyCH4V TGCA 6 cut(s) 49, 686, 769, 1292, 1306, 1505
HpyF10VI GCNNNNNNNGC 7 cut(s) 169, 221, 224, 233, 812, 821, 1298
HpyF3I CTNAG 3 cut(s) 56, 168, 200
Hsp92I GRCGYC 1 cut(s) 161
Hsp92II CATG 9 cut(s) 71, 89, 415, 568, 814, 964, 1021, 1393, 1453
Kpn2I TCCGGA 1 cut(s) 940
Ksp22I TGATCA 1 cut(s) 1465
Kzo9I GATC 6 cut(s) 518, 556, 631, 937, 1070, 1465
LmnI GCTCC 1 cut(s) 1386
Lsp1109I GCAGC 4 cut(s) 211, 818, 1489, 1517
LweI GCATC 5 cut(s) 166, 583, 588, 649, 1537
MaeI CTAG 5 cut(s) 404, 614, 989, 1241, 1583
MaeIII GTNAC 5 cut(s) 466, 538, 899, 1472, 1558
MalI GATC 6 cut(s) 520, 558, 633, 939, 1072, 1467
MboI GATC 6 cut(s) 518, 556, 631, 937, 1070, 1465
MflI RGATCY 2 cut(s) 518, 556
MhlI GDGCHC 5 cut(s) 13, 174, 206, 411, 1101
MlsI TGGCCA 1 cut(s) 815
MluCI AATT 9 cut(s) 290, 761, 929, 947, 984, 1185, 1272, 1339, 1544
MluNI TGGCCA 1 cut(s) 815
MlyI GAGTC 1 cut(s) 1582
MmeI TCCRAC 1 cut(s) 1422
Mox20I TGGCCA 1 cut(s) 815
MroI TCCGGA 1 cut(s) 940
MroXI GAANNNNTTC 1 cut(s) 870
MscI TGGCCA 1 cut(s) 815
MseI TTAA 3 cut(s) 461, 801, 833
MslI CAYNNNNRTG 1 cut(s) 1430
Msp20I TGGCCA 1 cut(s) 815
MspA1I CMGCKG 2 cut(s) 224, 1076
MspI CCGG 2 cut(s) 544, 941
MspR9I CCNGG 2 cut(s) 544, 1152
Mva1269I GAATGC 1 cut(s) 688
MvaI CCWGG 1 cut(s) 1152
MvnI CGCG 1 cut(s) 1199
MwoI GCNNNNNNNGC 7 cut(s) 169, 221, 224, 233, 812, 821, 1298
NciI CCSGG 1 cut(s) 544
NcoI CCATGG 3 cut(s) 810, 960, 1017
NdeII GATC 6 cut(s) 518, 556, 631, 937, 1070, 1465
NlaIII CATG 9 cut(s) 71, 89, 415, 568, 814, 964, 1021, 1393, 1453
NlaIV GGNNCC 3 cut(s) 73, 520, 1148
NmuCI GTSAC 4 cut(s) 538, 899, 1472, 1558
NspI RCATGY 2 cut(s) 89, 1393
PaeI GCATGC 2 cut(s) 89, 1393
PagI TCATGA 1 cut(s) 564
PceI AGGCCT 1 cut(s) 186
PctI GAATGC 1 cut(s) 688
PdmI GAANNNNTTC 1 cut(s) 870
PfeI GAWTC 4 cut(s) 64, 847, 866, 1155
PflFI GACNNNGTC 1 cut(s) 1438
PflMI CCANNNNNTGG 1 cut(s) 737
PkrI GCNGC 7 cut(s) 217, 226, 376, 754, 808, 1504, 1507
PleI GAGTC 1 cut(s) 1582
PpsI GAGTC 1 cut(s) 1582
Psp124BI GAGCTC 1 cut(s) 1101
Psp6I CCWGG 1 cut(s) 1150
PspEI GGTNACC 2 cut(s) 538, 899
PspFI CCCAGC 1 cut(s) 1065
PspGI CCWGG 1 cut(s) 1150
PspN4I GGNNCC 3 cut(s) 73, 520, 1148
PspPI GGNCC 2 cut(s) 72, 943
PstI CTGCAG 1 cut(s) 1507
PsuI RGATCY 2 cut(s) 518, 556
PsyI GACNNNGTC 1 cut(s) 1438
PvuII CAGCTG 1 cut(s) 1076
RsaI GTAC 1 cut(s) 1284
RsaNI GTAC 1 cut(s) 1283
RseI CAYNNNNRTG 1 cut(s) 1430
SacI GAGCTC 1 cut(s) 1101
SaqAI TTAA 3 cut(s) 461, 801, 833
SatI GCNGC 7 cut(s) 216, 225, 375, 753, 807, 1503, 1506
Sau3AI GATC 6 cut(s) 518, 556, 631, 937, 1070, 1465
Sau96I GGNCC 2 cut(s) 72, 943
SchI GAGTC 1 cut(s) 1582
ScrFI CCNGG 2 cut(s) 544, 1152
SduI GDGCHC 5 cut(s) 13, 174, 206, 411, 1101
SfaNI GCATC 5 cut(s) 166, 583, 588, 649, 1537
SfcI CTRYAG 2 cut(s) 910, 1503
SinI GGWCC 2 cut(s) 72, 943
SmiMI CAYNNNNRTG 1 cut(s) 1430
SmlI CTYRAG 4 cut(s) 97, 188, 825, 1136
SmoI CTYRAG 4 cut(s) 97, 188, 825, 1136
SphI GCATGC 2 cut(s) 89, 1393
Sse9I AATT 9 cut(s) 290, 761, 929, 947, 984, 1185, 1272, 1339, 1544
SseBI AGGCCT 1 cut(s) 186
SsiI CCGC 8 cut(s) 75, 216, 222, 318, 375, 419, 752, 1199
SspMI CTAG 5 cut(s) 404, 614, 989, 1241, 1583
SstI GAGCTC 1 cut(s) 1101
StuI AGGCCT 1 cut(s) 186
StyD4I CCNGG 2 cut(s) 542, 1150
StyI CCWWGG 4 cut(s) 194, 810, 960, 1017
TaaI ACNGT 4 cut(s) 611, 925, 1261, 1517
TaqI TCGA 5 cut(s) 15, 927, 1221, 1270, 1430
TasI AATT 9 cut(s) 290, 761, 929, 947, 984, 1185, 1272, 1339, 1544
TatI WGTACW 1 cut(s) 1282
TauI GCSGC 3 cut(s) 218, 377, 755
TfiI GAWTC 4 cut(s) 64, 847, 866, 1155
Tru1I TTAA 3 cut(s) 461, 801, 833
Tru9I TTAA 3 cut(s) 461, 801, 833
TscAI CASTG 1 cut(s) 1264
TseFI GTSAC 4 cut(s) 538, 899, 1472, 1558
TseI GCWGC 4 cut(s) 224, 806, 1502, 1505
Tsp45I GTSAC 4 cut(s) 538, 899, 1472, 1558
TspDTI ATGAA 8 cut(s) 56, 150, 581, 1055, 1158, 1333, 1438, 1566
TspGWI ACGGA 2 cut(s) 221, 565
TspRI CASTG 1 cut(s) 1264
Tth111I GACNNNGTC 1 cut(s) 1438
Van91I CCANNNNNTGG 1 cut(s) 737
VpaK11BI GGWCC 2 cut(s) 72, 943
XapI RAATTY 4 cut(s) 761, 929, 984, 1185
XbaI TCTAGA 3 cut(s) 613, 988, 1582
XceI RCATGY 2 cut(s) 89, 1393
XmnI GAANNNNTTC 1 cut(s) 870
XspI CTAG 5 cut(s) 404, 614, 989, 1241, 1583
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.