Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001706.1

Orthogroup ID

OG0000271

Physical Location & Seq

Genomic Coordinates Forward (+)

31165 .. 32595

Gene Structure 1431 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001706.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1266 bp

atggagcacgatgccttgtcgcataagagatcaagcaagttattgaattctgaattatctaacgttagcggtgttgaggagcaaccaaatacattctggacacagtgccccttttgttgcgcaatgtctcaataccgccgagacactctggatcgcttggtcaattgtcagatatgccgtcaaccatttggagctcatgaaatgaagaaaagagatcaatctctcaggaatcaatttaacgataccctgaaatccgccccgagtcccgctaaagcaggtaacttcatcgatctctctgctgaaaccctgaactattacgatagtgatgaagaggttagggttcttaggttcaaaccctccaatatccctttcgggaaaagcaagcgaatagaaacctcaaacgaaggttcttgttgttctacttccaaagccccatcttttgtttgtgaaatttgtgtggagatcaagccggcacacgaatcgtttagtatcaaaaattgcaaccatgtttattgtactgattgcgtggtcaaatatgtggactcgaagctccaagaaaatatagcaagcattgggtgccttgtacccgattgcaaagggtcacttgatcccgaatattgccattccattctaaaacccgatgtgtttgaaaaatgggggacaaggttgtgcgaagatgtgattattgggtctcagaaattttactgcccctttaaggactgctccgcaatgttgatcgacgatgggccagaggtagtgagggaatcggagtgccctaattgtaaaagattgttctgtgcgcagtgtaaggttccttggcacgccaggattacttgtgccgagtttaagaggcggaataagggtgatactgaaaaggatgatcttgttatggagaaacttgcttacaagaagcactggagaaagtgcccaacgtgtgggatctatgtagaaagatcaggaggctgcacagcaatacgatgcaggtgcgggacttatttcaacttccattgtggacgactgggttgtcctttttgtggaaaacacagaaagaaaagttatagaactatgggctatttcgtattcttgaaggagtacagaaggattcagcgggaccggggggaaccctataatcaagctactgctaaacttgctattgagaaatggagatccatgtctcgttctgaaaaaaagccctatgagagcccagagatgaaaccgattagaatcttccgggtgcgatcgaagatgtcgagtaaagaaggctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0012505 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044444 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR zf-C3HC4

Protein Analysis

421

Amino Acids

48.46

Weight (kDa)

8.91

Isoelectric Point (pI)

53.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000271)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14250
fragaria_vesca	FvH4_1g09490 FvH4_1g09500 FvH4_1g09500 FvH4_1g09510 FvH4_3g00870 FvH4_3g03010 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g35700 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220
malus_domestica	MD02G1102400.v1.1 MD02G1103700.v1.1 MD03G1111900.v1.1 MD09G1173800.v1.1 MD09G1230900.v1.1 MD09G1231400.v1.1 MD15G1224200.v1.1
prunus_persica	Prupe.3G031900_v2.0.a1 Prupe.3G107200_v2.0.a1 Prupe.7G191200_v2.0.a1 Prupe.7G191800_v2.0.a1 Prupe.8G007700_v2.0.a1
pyrus_communis	pycom02g08010 pycom02g08140 pycom09g14980 pycom09g15030 pycom15g19900
rosa_chinensis	RchiOBHm_Chr2g0096041 RchiOBHm_Chr2g0096051 RchiOBHm_Chr2g0096061 RchiOBHm_Chr2g0096071 RchiOBHm_Chr2g0096081 RchiOBHm_Chr2g0096221 RchiOBHm_Chr2g0131511 RchiOBHm_Chr2g0147691 RchiOBHm_Chr5g0001281 RchiOBHm_Chr5g0001301
rosa_laevigata	RLG00000016619 RLG00000016620 RLG00000016621 RLG00000016622 RLG00000019200 RLG00000020271 RLG00000025410 RLG00000030919 RLG00000031102 RLG00000031117 RLG00000031119 RLG00000031120
rosa_multiflora	Rmu_co8160592.1_g000001 Rmu_sc0001706.1_g000008 Rmu_sc0002494.1_g000005 Rmu_sc0004189.1_g000040 Rmu_sc0005612.1_g000008 Rmu_sc0005612.1_g000011 Rmu_sc0005612.1_g000012 Rmu_sc0006926.1_g000015 Rmu_sc0013257.1_g000002 Rmu_sc0034363.1_g000001 Rmu_sc0034363.1_g000002
rosa_roxburghii	Rroxscaffold_1G00072690 Rroxscaffold_1G00075020 Rroxscaffold_2G00145780 Rroxscaffold_2G00145790 Rroxscaffold_2G00145800 Rroxscaffold_2G00145810 Rroxscaffold_2G00145820 Rroxscaffold_2G00145830 Rroxscaffold_4G00300930 Rroxscaffold_6G00424750
rosa_rugosa	Rorug02G0056000 Rorug02G0056100 Rorug02G0056200 Rorug02G0056300 Rorug02G0056500 Rorug02G0056700 Rorug02G0298000.1 Rorug02G0400900 Rorug02G0401000 Rorug02G0401100 Rorug04G0389500 Rorug04G0389600 Rorug04G0389700 Rorug04G0402300
rosa_samantha	Rh2AG103800 Rh2AG458300 Rh2BG105400 Rh2BG105500 Rh2BG105600 Rh2BG105700 Rh2BG105900 Rh2BG357600 Rh2BG471000 Rh2DG106000 Rh2DG106100 Rh2DG106200 Rh2DG106300 Rh2DG106500 Rh2DG375400 Rh2DG480300 Rh5AG009500 Rh5AG009600 Rh5AG010000 Rh5AG028300 Rh5BG012400 Rh5BG012500 Rh5BG012700 Rh5BG028500
rosa_wichuraiana	Rw2G007950 Rw2G007960 Rw2G007970 Rw2G028490 Rw5G000980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	972
AasI	GACNNNNNNGTC	1 cut(s)	1023
Acc16I	TGCGCA	2 cut(s)	121, 801
Acc36I	ACCTGC	2 cut(s)	266, 972
AccB1I	GGYRCC	1 cut(s)	576
AccB7I	CCANNNNNTGG	1 cut(s)	935
AciI	CCGC	8 cut(s)	69, 136, 255, 267, 726, 853, 987, 1108
AclI	AACGTT	1 cut(s)	63
AclWI	GGATC	4 cut(s)	159, 602, 947, 1161
AcsI	RAATTY	3 cut(s)	46, 450, 698
AfaI	GTAC	3 cut(s)	517, 585, 1094
AfiI	CCNNNNNNNGG	3 cut(s)	715, 935, 1034
AflIII	ACRYGT	1 cut(s)	932
AgsI	TTSAA	5 cut(s)	46, 352, 650, 1000, 1087
AjnI	CCWGG	1 cut(s)	824
AjuI	GAANNNNNNNTTGG	2 cut(s)	353, 385
AluBI	AGCT	3 cut(s)	194, 550, 1136
AluI	AGCT	3 cut(s)	194, 550, 1136
Alw21I	GWGCWC	2 cut(s)	9, 196
Alw26I	GTCTC	4 cut(s)	132, 135, 696, 1179
AlwI	GGATC	4 cut(s)	159, 602, 947, 1161
Ama87I	CYCGRG	1 cut(s)	259
AoxI	GGCC	1 cut(s)	746
ApeKI	GCWGC	1 cut(s)	963
ApoI	RAATTY	3 cut(s)	46, 450, 698
AspLEI	GCGC	2 cut(s)	122, 802
AspS9I	GGNCC	2 cut(s)	746, 1111
AsuC2I	CCSGG	2 cut(s)	1115, 1232
AsuHPI	GGTGA	1 cut(s)	875
AvaI	CYCGRG	1 cut(s)	259
AvaII	GGWCC	1 cut(s)	1111
BaeGI	GKGCMC	3 cut(s)	110, 776, 929
BanI	GGYRCC	1 cut(s)	576
BanII	GRGCYC	2 cut(s)	196, 1205
Bbv12I	GWGCWC	2 cut(s)	9, 196
BbvI	GCAGC	1 cut(s)	950
BccI	CCATC	2 cut(s)	442, 737
BceAI	ACGGC	1 cut(s)	162
BcgI	CGANNNNNNTGC	6 cut(s)	278, 312, 462, 496, 966, 1000
BciT130I	CCWGG	1 cut(s)	826
BcnI	CCSGG	2 cut(s)	1115, 1232
BcoDI	GTCTC	4 cut(s)	132, 135, 696, 1179
BfuAI	ACCTGC	2 cut(s)	266, 972
BisI	GCNGC	1 cut(s)	964
BlsI	GCNGC	1 cut(s)	965
Bme1390I	CCNGG	3 cut(s)	826, 1115, 1232
Bme18I	GGWCC	1 cut(s)	1111
BmeT110I	CYCGRG	1 cut(s)	259
BmgT120I	GGNCC	2 cut(s)	746, 1111
BmiI	GGNNCC	4 cut(s)	578, 813, 1112, 1122
BmrFI	CCNGG	3 cut(s)	826, 1115, 1232
BmrI	ACTGGG	1 cut(s)	1028
BmsI	GCATC	1 cut(s)	968
BmuI	ACTGGG	1 cut(s)	1028
BpmI	CTGGAG	1 cut(s)	937
BpuMI	CCSGG	2 cut(s)	1115, 1232
Bsa29I	ATCGAT	1 cut(s)	288
BsaBI	GATNNNNATC	1 cut(s)	1223
BsaI	GGTCTC	1 cut(s)	696
BsaJI	CCNNGG	2 cut(s)	815, 1114
Bsc4I	CCNNNNNNNGG	3 cut(s)	715, 935, 1034
Bse118I	RCCGGY	1 cut(s)	469
Bse1I	ACTGG	2 cut(s)	920, 1023
Bse3DI	GCAATG	2 cut(s)	129, 735
Bse8I	GATNNNNATC	1 cut(s)	1223
BseBI	CCWGG	1 cut(s)	826
BseCI	ATCGAT	1 cut(s)	288
BseDI	CCNNGG	2 cut(s)	815, 1114
BseGI	GGATG	1 cut(s)	883
BseJI	GATNNNNATC	1 cut(s)	1223
BseLI	CCNNNNNNNGG	3 cut(s)	715, 935, 1034
BseMI	GCAATG	2 cut(s)	129, 735
BseMII	CTCAG	2 cut(s)	238, 707
BseNI	ACTGG	2 cut(s)	920, 1023
BseRI	GAGGAG	1 cut(s)	92
BseSI	GKGCMC	3 cut(s)	110, 776, 929
BseXI	GCAGC	1 cut(s)	950
BsgI	GTGCAG	1 cut(s)	949
Bsh1285I	CGRYCG	1 cut(s)	1241
BshFI	GGCC	1 cut(s)	748
BshNI	GGYRCC	1 cut(s)	576
BshVI	ATCGAT	1 cut(s)	288
BsiEI	CGRYCG	1 cut(s)	1241
BsiHKAI	GWGCWC	2 cut(s)	9, 196
BsiHKCI	CYCGRG	1 cut(s)	259
BsiSI	CCGG	3 cut(s)	470, 1114, 1231
BslFI	GGGAC	4 cut(s)	249, 673, 1003, 1124
BslI	CCNNNNNNNGG	3 cut(s)	715, 935, 1034
BsmAI	GTCTC	4 cut(s)	132, 135, 696, 1179
BsmFI	GGGAC	4 cut(s)	249, 673, 1003, 1124
BsnI	GGCC	1 cut(s)	748
Bso31I	GGTCTC	1 cut(s)	696
BsoBI	CYCGRG	1 cut(s)	259
Bsp1286I	GDGCHC	6 cut(s)	9, 110, 196, 776, 929, 1205
BspACI	CCGC	8 cut(s)	69, 136, 255, 267, 726, 853, 987, 1108
BspANI	GGCC	1 cut(s)	748
BspCNI	CTCAG	2 cut(s)	237, 706
BspDI	ATCGAT	1 cut(s)	288
BspHI	TCATGA	1 cut(s)	196
BspLI	GGNNCC	4 cut(s)	578, 813, 1112, 1122
BspMI	ACCTGC	2 cut(s)	266, 972
BspPI	GGATC	4 cut(s)	159, 602, 947, 1161
BspT107I	GGYRCC	1 cut(s)	576
BspTNI	GGTCTC	1 cut(s)	696
BsrDI	GCAATG	2 cut(s)	129, 735
BsrFI	RCCGGY	1 cut(s)	469
BsrI	ACTGG	2 cut(s)	920, 1023
BssAI	RCCGGY	1 cut(s)	469
BssECI	CCNNGG	2 cut(s)	815, 1114
BssT1I	CCWWGG	1 cut(s)	815
Bst2UI	CCWGG	1 cut(s)	826
Bst4CI	ACNGT	1 cut(s)	105
Bst6I	CTCTTC	1 cut(s)	324
BstAPI	GCANNNNNTGC	1 cut(s)	576
BstC8I	GCNNGC	4 cut(s)	383, 471, 568, 822
BstDEI	CTNAG	3 cut(s)	224, 344, 693
BstF5I	GGATG	1 cut(s)	883
BstHHI	GCGC	2 cut(s)	122, 802
BstMAI	GTCTC	4 cut(s)	132, 135, 696, 1179
BstMCI	CGRYCG	1 cut(s)	1241
BstMWI	GCNNNNNNNGC	2 cut(s)	576, 1148
BstNI	CCWGG	1 cut(s)	826
BstSCI	CCNGG	3 cut(s)	824, 1113, 1230
BstSLI	GKGCMC	3 cut(s)	110, 776, 929
BstV1I	GCAGC	1 cut(s)	950
BstX2I	RGATCY	2 cut(s)	939, 1166
BstYI	RGATCY	2 cut(s)	939, 1166
Bsu15I	ATCGAT	1 cut(s)	288
BsuRI	GGCC	1 cut(s)	748
BsuTUI	ATCGAT	1 cut(s)	288
BtsCI	GGATG	1 cut(s)	883
BtsI	GCAGTG	1 cut(s)	809
BtsIMutI	CAGTG	3 cut(s)	110, 809, 913
BveI	ACCTGC	2 cut(s)	266, 972
Cac8I	GCNNGC	4 cut(s)	383, 471, 568, 822
CciI	TCATGA	1 cut(s)	196
CfoI	GCGC	2 cut(s)	122, 802
Cfr10I	RCCGGY	1 cut(s)	469
Cfr13I	GGNCC	2 cut(s)	746, 1111
ClaI	ATCGAT	1 cut(s)	288
Csp6I	GTAC	3 cut(s)	516, 584, 1093
CviAII	CATG	3 cut(s)	197, 506, 1171
CviQI	GTAC	3 cut(s)	516, 584, 1093
DdeI	CTNAG	3 cut(s)	224, 344, 693
DrdI	GACNNNNNNGTC	1 cut(s)	1023
DseDI	GACNNNNNNGTC	1 cut(s)	1023
Eam1104I	CTCTTC	1 cut(s)	324
EarI	CTCTTC	1 cut(s)	324
EciI	GGCGGA	2 cut(s)	244, 868
Ecl136II	GAGCTC	1 cut(s)	194
Eco130I	CCWWGG	1 cut(s)	815
Eco24I	GRGCYC	2 cut(s)	196, 1205
Eco31I	GGTCTC	1 cut(s)	696
Eco47I	GGWCC	1 cut(s)	1111
Eco53kI	GAGCTC	1 cut(s)	194
Eco88I	CYCGRG	1 cut(s)	259
EcoICRI	GAGCTC	1 cut(s)	194
EcoRI	GAATTC	1 cut(s)	46
EcoRII	CCWGG	1 cut(s)	824
EcoT14I	CCWWGG	1 cut(s)	815
EcoT38I	GRGCYC	2 cut(s)	196, 1205
ErhI	CCWWGG	1 cut(s)	815
FaeI	CATG	3 cut(s)	200, 509, 1174
FalI	AAGNNNNNCTT	2 cut(s)	588, 620
FaqI	GGGAC	4 cut(s)	249, 673, 1003, 1124
FatI	CATG	3 cut(s)	196, 505, 1170
FauI	CCCGC	3 cut(s)	274, 980, 1101
Fnu4HI	GCNGC	1 cut(s)	964
FokI	GGATG	1 cut(s)	890
FriOI	GRGCYC	2 cut(s)	196, 1205
Fsp4HI	GCNGC	1 cut(s)	964
FspI	TGCGCA	2 cut(s)	121, 801
GlaI	GCGC	2 cut(s)	121, 801
GluI	GCNGC	1 cut(s)	964
GsuI	CTGGAG	1 cut(s)	937
HaeIII	GGCC	1 cut(s)	748
HapII	CCGG	3 cut(s)	470, 1114, 1231
HhaI	GCGC	2 cut(s)	122, 802
Hin1II	CATG	3 cut(s)	200, 509, 1174
Hin6I	GCGC	2 cut(s)	120, 800
HinP1I	GCGC	2 cut(s)	120, 800
HincII	GTYRAC	1 cut(s)	182
HindII	GTYRAC	1 cut(s)	182
HinfI	GANTC	7 cut(s)	229, 262, 479, 542, 764, 1102, 1224
HpaII	CCGG	3 cut(s)	470, 1114, 1231
HphI	GGTGA	1 cut(s)	875
Hpy166II	GTNNAC	3 cut(s)	182, 541, 1013
Hpy188I	TCNGA	5 cut(s)	52, 171, 696, 769, 1183
Hpy188III	TCNNGA	8 cut(s)	97, 149, 197, 226, 373, 611, 957, 1084
Hpy8I	GTNNAC	3 cut(s)	182, 541, 1013
Hpy99I	CGWCG	1 cut(s)	743
HpyAV	CCTTC	4 cut(s)	398, 1081, 1092, 1253
HpyCH4III	ACNGT	1 cut(s)	105
HpyCH4IV	ACGT	2 cut(s)	63, 932
HpyCH4V	TGCA	4 cut(s)	501, 594, 966, 981
HpyF10VI	GCNNNNNNNGC	2 cut(s)	576, 1148
HpyF3I	CTNAG	3 cut(s)	224, 344, 693
HpySE526I	ACGT	2 cut(s)	63, 932
Hsp92II	CATG	3 cut(s)	200, 509, 1174
HspAI	GCGC	2 cut(s)	120, 800
KroI	GCCGGC	1 cut(s)	469
KroNI	GCCGGC	1 cut(s)	471
LmnI	GCTCC	5 cut(s)	4, 79, 191, 555, 728
Lsp1109I	GCAGC	1 cut(s)	950
LweI	GCATC	1 cut(s)	968
MaeII	ACGT	2 cut(s)	63, 932
MaeIII	GTNAC	2 cut(s)	278, 600
MboII	GAAGA	5 cut(s)	217, 341, 686, 1219, 1255
MfeI	CAATTG	1 cut(s)	163
MflI	RGATCY	2 cut(s)	939, 1166
MhlI	GDGCHC	6 cut(s)	9, 110, 196, 776, 929, 1205
MluCI	AATT	8 cut(s)	46, 53, 163, 233, 450, 496, 698, 778
MlyI	GAGTC	2 cut(s)	271, 536
MnlI	CCTC	8 cut(s)	70, 325, 367, 406, 745, 753, 843, 953
MroNI	GCCGGC	1 cut(s)	469
MseI	TTAA	3 cut(s)	237, 714, 846
MspA1I	CMGCKG	1 cut(s)	1108
MspI	CCGG	3 cut(s)	470, 1114, 1231
MspR9I	CCNGG	3 cut(s)	826, 1115, 1232
MunI	CAATTG	1 cut(s)	163
MvaI	CCWGG	1 cut(s)	826
MwoI	GCNNNNNNNGC	2 cut(s)	576, 1148
NaeI	GCCGGC	1 cut(s)	471
NciI	CCSGG	2 cut(s)	1115, 1232
NgoMIV	GCCGGC	1 cut(s)	469
NlaIII	CATG	3 cut(s)	200, 509, 1174
NlaIV	GGNNCC	4 cut(s)	578, 813, 1112, 1122
NmeAIII	GCCGAG	2 cut(s)	164, 865
NmuCI	GTSAC	1 cut(s)	600
NsbI	TGCGCA	2 cut(s)	121, 801
PagI	TCATGA	1 cut(s)	196
PaqCI	CACCTGC	1 cut(s)	972
PcsI	WCGNNNNNNNCGW	1 cut(s)	1247
PdiI	GCCGGC	1 cut(s)	471
PfeI	GAWTC	5 cut(s)	229, 479, 764, 1102, 1224
PflMI	CCANNNNNTGG	1 cut(s)	935
PkrI	GCNGC	1 cut(s)	965
Ple19I	CGATCG	1 cut(s)	1241
PleI	GAGTC	2 cut(s)	270, 536
PpsI	GAGTC	2 cut(s)	270, 536
Psp124BI	GAGCTC	1 cut(s)	196
Psp1406I	AACGTT	1 cut(s)	63
Psp6I	CCWGG	1 cut(s)	824
PspGI	CCWGG	1 cut(s)	824
PspN4I	GGNNCC	4 cut(s)	578, 813, 1112, 1122
PspPI	GGNCC	2 cut(s)	746, 1111
PsuI	RGATCY	2 cut(s)	939, 1166
PvuI	CGATCG	1 cut(s)	1241
RsaI	GTAC	3 cut(s)	517, 585, 1094
RsaNI	GTAC	3 cut(s)	516, 584, 1093
SacI	GAGCTC	1 cut(s)	196
SaqAI	TTAA	3 cut(s)	237, 714, 846
SatI	GCNGC	1 cut(s)	964
Sau96I	GGNCC	2 cut(s)	746, 1111
SchI	GAGTC	2 cut(s)	271, 536
ScrFI	CCNGG	3 cut(s)	826, 1115, 1232
SduI	GDGCHC	6 cut(s)	9, 110, 196, 776, 929, 1205
SfaNI	GCATC	1 cut(s)	968
SinI	GGWCC	1 cut(s)	1111
Sse9I	AATT	8 cut(s)	46, 53, 163, 233, 450, 496, 698, 778
SsiI	CCGC	8 cut(s)	69, 136, 255, 267, 726, 853, 987, 1108
SspI	AATATT	1 cut(s)	617
SstI	GAGCTC	1 cut(s)	196
StyD4I	CCNGG	3 cut(s)	824, 1113, 1230
StyI	CCWWGG	1 cut(s)	815
TaaI	ACNGT	1 cut(s)	105
TaiI	ACGT	2 cut(s)	66, 935
TaqI	TCGA	5 cut(s)	288, 545, 738, 1241, 1250
TasI	AATT	8 cut(s)	46, 53, 163, 233, 450, 496, 698, 778
TatI	WGTACW	2 cut(s)	515, 1092
TfiI	GAWTC	5 cut(s)	229, 479, 764, 1102, 1224
Tru1I	TTAA	3 cut(s)	237, 714, 846
Tru9I	TTAA	3 cut(s)	237, 714, 846
TscAI	CASTG	3 cut(s)	110, 809, 920
TseFI	GTSAC	1 cut(s)	600
TseI	GCWGC	1 cut(s)	963
Tsp45I	GTSAC	1 cut(s)	600
TspDTI	ATGAA	5 cut(s)	213, 218, 274, 342, 1226
TspRI	CASTG	3 cut(s)	110, 809, 920
Van91I	CCANNNNNTGG	1 cut(s)	935
VpaK11BI	GGWCC	1 cut(s)	1111
XapI	RAATTY	3 cut(s)	46, 450, 698
XcmI	CCANNNNNNNNNTGG	1 cut(s)	93

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.