E3 ubiquitin-protein ligase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 252 |
| AciI | CCGC | 1 cut(s) | 264 |
| AfaI | GTAC | 1 cut(s) | 368 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 263, 311 |
| AgsI | TTSAA | 3 cut(s) | 149, 209, 277 |
| AjnI | CCWGG | 1 cut(s) | 162 |
| AluBI | AGCT | 1 cut(s) | 42 |
| AluI | AGCT | 1 cut(s) | 42 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 286, 318 |
| AspS9I | GGNCC | 1 cut(s) | 385 |
| AvaII | GGWCC | 1 cut(s) | 385 |
| BaeGI | GKGCMC | 1 cut(s) | 257 |
| BanI | GGYRCC | 1 cut(s) | 252 |
| BciT130I | CCWGG | 1 cut(s) | 164 |
| BclI | TGATCA | 1 cut(s) | 154 |
| BfaI | CTAG | 1 cut(s) | 177 |
| Bme1390I | CCNGG | 1 cut(s) | 164 |
| Bme18I | GGWCC | 1 cut(s) | 385 |
| BmgT120I | GGNCC | 1 cut(s) | 385 |
| BmiI | GGNNCC | 3 cut(s) | 254, 386, 397 |
| BmrFI | CCNGG | 1 cut(s) | 164 |
| BpuEI | CTTGAG | 1 cut(s) | 102 |
| BsaBI | GATNNNNATC | 1 cut(s) | 156 |
| BsaJI | CCNNGG | 3 cut(s) | 162, 257, 388 |
| BsaWI | WCCGGW | 1 cut(s) | 243 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 263, 311 |
| Bse1I | ACTGG | 1 cut(s) | 140 |
| Bse8I | GATNNNNATC | 1 cut(s) | 156 |
| BseBI | CCWGG | 1 cut(s) | 164 |
| BseDI | CCNNGG | 3 cut(s) | 162, 257, 388 |
| BseGI | GGATG | 1 cut(s) | 157 |
| BseJI | GATNNNNATC | 1 cut(s) | 156 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 263, 311 |
| BseNI | ACTGG | 1 cut(s) | 140 |
| BseSI | GKGCMC | 1 cut(s) | 257 |
| BshNI | GGYRCC | 1 cut(s) | 252 |
| BsiSI | CCGG | 1 cut(s) | 244 |
| BslFI | GGGAC | 3 cut(s) | 30, 280, 398 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 263, 311 |
| BsmFI | GGGAC | 3 cut(s) | 30, 280, 398 |
| Bsp1286I | GDGCHC | 1 cut(s) | 257 |
| Bsp143I | GATC | 1 cut(s) | 154 |
| BspACI | CCGC | 1 cut(s) | 264 |
| BspHI | TCATGA | 1 cut(s) | 357 |
| BspLI | GGNNCC | 3 cut(s) | 254, 386, 397 |
| BspT107I | GGYRCC | 1 cut(s) | 252 |
| BsrI | ACTGG | 1 cut(s) | 140 |
| BssECI | CCNNGG | 3 cut(s) | 162, 257, 388 |
| BssMI | GATC | 1 cut(s) | 154 |
| BssT1I | CCWWGG | 1 cut(s) | 257 |
| Bst2UI | CCWGG | 1 cut(s) | 164 |
| BstF5I | GGATG | 1 cut(s) | 157 |
| BstKTI | GATC | 1 cut(s) | 157 |
| BstMBI | GATC | 1 cut(s) | 154 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 261 |
| BstNI | CCWGG | 1 cut(s) | 164 |
| BstSCI | CCNGG | 1 cut(s) | 162 |
| BstSLI | GKGCMC | 1 cut(s) | 257 |
| BtsCI | GGATG | 1 cut(s) | 157 |
| BtsIMutI | CAGTG | 1 cut(s) | 386 |
| CciI | TCATGA | 1 cut(s) | 357 |
| Cfr13I | GGNCC | 1 cut(s) | 385 |
| Csp6I | GTAC | 1 cut(s) | 367 |
| CviAII | CATG | 2 cut(s) | 34, 358 |
| CviJI | RGCY | 2 cut(s) | 42, 345 |
| CviKI_1 | RGCY | 2 cut(s) | 42, 345 |
| CviQI | GTAC | 1 cut(s) | 367 |
| DpnI | GATC | 1 cut(s) | 156 |
| DpnII | GATC | 1 cut(s) | 154 |
| Eco130I | CCWWGG | 1 cut(s) | 257 |
| Eco47I | GGWCC | 1 cut(s) | 385 |
| EcoRII | CCWGG | 1 cut(s) | 162 |
| EcoT14I | CCWWGG | 1 cut(s) | 257 |
| ErhI | CCWWGG | 1 cut(s) | 257 |
| FaeI | CATG | 2 cut(s) | 37, 361 |
| FaiI | YATR | 9 cut(s) | 35, 50, 104, 218, 321, 336, 341, 359, 403 |
| FaqI | GGGAC | 3 cut(s) | 30, 280, 398 |
| FatI | CATG | 2 cut(s) | 33, 357 |
| FauI | CCCGC | 1 cut(s) | 257 |
| FbaI | TGATCA | 1 cut(s) | 154 |
| FokI | GGATG | 1 cut(s) | 144 |
| FspBI | CTAG | 1 cut(s) | 177 |
| HapII | CCGG | 1 cut(s) | 244 |
| Hin1II | CATG | 2 cut(s) | 37, 361 |
| HinfI | GANTC | 2 cut(s) | 95, 376 |
| HpaII | CCGG | 1 cut(s) | 244 |
| Hpy166II | GTNNAC | 1 cut(s) | 290 |
| Hpy188III | TCNNGA | 3 cut(s) | 56, 177, 358 |
| Hpy8I | GTNNAC | 1 cut(s) | 290 |
| HpyAV | CCTTC | 2 cut(s) | 243, 366 |
| HpyCH4V | TGCA | 2 cut(s) | 67, 77 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 261 |
| Hsp92II | CATG | 2 cut(s) | 37, 361 |
| Ksp22I | TGATCA | 1 cut(s) | 154 |
| Kzo9I | GATC | 1 cut(s) | 154 |
| LpnPI | CCDG | 6 cut(s) | 28, 69, 149, 153, 176, 257 |
| MaeI | CTAG | 1 cut(s) | 177 |
| MalI | GATC | 1 cut(s) | 156 |
| MboI | GATC | 1 cut(s) | 154 |
| MboII | GAAGA | 4 cut(s) | 161, 197, 340, 373 |
| MhlI | GDGCHC | 1 cut(s) | 257 |
| MluCI | AATT | 2 cut(s) | 23, 331 |
| MnlI | CCTC | 2 cut(s) | 124, 383 |
| MseI | TTAA | 1 cut(s) | 198 |
| MspI | CCGG | 1 cut(s) | 244 |
| MspR9I | CCNGG | 1 cut(s) | 164 |
| MvaI | CCWGG | 1 cut(s) | 164 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 261 |
| NdeII | GATC | 1 cut(s) | 154 |
| NlaIII | CATG | 2 cut(s) | 37, 361 |
| NlaIV | GGNNCC | 3 cut(s) | 254, 386, 397 |
| PagI | TCATGA | 1 cut(s) | 357 |
| PfeI | GAWTC | 2 cut(s) | 95, 376 |
| Psp6I | CCWGG | 1 cut(s) | 162 |
| PspGI | CCWGG | 1 cut(s) | 162 |
| PspN4I | GGNNCC | 3 cut(s) | 254, 386, 397 |
| PspPI | GGNCC | 1 cut(s) | 385 |
| RsaI | GTAC | 1 cut(s) | 368 |
| RsaNI | GTAC | 1 cut(s) | 367 |
| SaqAI | TTAA | 1 cut(s) | 198 |
| Sau3AI | GATC | 1 cut(s) | 154 |
| Sau96I | GGNCC | 1 cut(s) | 385 |
| ScrFI | CCNGG | 1 cut(s) | 164 |
| SduI | GDGCHC | 1 cut(s) | 257 |
| SetI | ASST | 4 cut(s) | 44, 135, 254, 263 |
| SinI | GGWCC | 1 cut(s) | 385 |
| SmlI | CTYRAG | 1 cut(s) | 117 |
| SmoI | CTYRAG | 1 cut(s) | 117 |
| Sse9I | AATT | 2 cut(s) | 23, 331 |
| SsiI | CCGC | 1 cut(s) | 264 |
| SspMI | CTAG | 1 cut(s) | 177 |
| StyD4I | CCNGG | 1 cut(s) | 162 |
| StyI | CCWWGG | 1 cut(s) | 257 |
| TaqII | GACCGA | 1 cut(s) | 402 |
| TasI | AATT | 2 cut(s) | 23, 331 |
| TatI | WGTACW | 1 cut(s) | 366 |
| TfiI | GAWTC | 2 cut(s) | 95, 376 |
| Tru1I | TTAA | 1 cut(s) | 198 |
| Tru9I | TTAA | 1 cut(s) | 198 |
| TscAI | CASTG | 1 cut(s) | 386 |
| TspDTI | ATGAA | 3 cut(s) | 17, 346, 374 |
| TspRI | CASTG | 1 cut(s) | 386 |
| VpaK11BI | GGWCC | 1 cut(s) | 385 |
| XbaI | TCTAGA | 1 cut(s) | 176 |
| XspI | CTAG | 1 cut(s) | 177 |