In Between Ring fingers
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 915 |
| Acc36I | ACCTGC | 1 cut(s) | 915 |
| AccB1I | GGYRCC | 4 cut(s) | 867, 876, 927, 984 |
| AccII | CGCG | 1 cut(s) | 290 |
| AciI | CCGC | 1 cut(s) | 483 |
| AclWI | GGATC | 1 cut(s) | 182 |
| AcoI | YGGCCR | 1 cut(s) | 75 |
| AfaI | GTAC | 1 cut(s) | 562 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 387, 526, 580 |
| AgsI | TTSAA | 3 cut(s) | 67, 348, 401 |
| AhlI | ACTAGT | 1 cut(s) | 968 |
| AjnI | CCWGG | 2 cut(s) | 766, 872 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 738, 770 |
| AluBI | AGCT | 4 cut(s) | 438, 501, 617, 841 |
| AluI | AGCT | 4 cut(s) | 438, 501, 617, 841 |
| Alw21I | GWGCWC | 1 cut(s) | 445 |
| Alw26I | GTCTC | 3 cut(s) | 97, 689, 996 |
| AlwI | GGATC | 1 cut(s) | 182 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 101 |
| AoxI | GGCC | 1 cut(s) | 75 |
| AspLEI | GCGC | 1 cut(s) | 743 |
| AsuC2I | CCSGG | 1 cut(s) | 522 |
| AsuHPI | GGTGA | 1 cut(s) | 688 |
| BaeGI | GKGCMC | 2 cut(s) | 719, 872 |
| BanI | GGYRCC | 4 cut(s) | 867, 876, 927, 984 |
| BbsI | GAAGAC | 1 cut(s) | 902 |
| Bbv12I | GWGCWC | 1 cut(s) | 445 |
| BccI | CCATC | 1 cut(s) | 346 |
| BceAI | ACGGC | 1 cut(s) | 90 |
| BciT130I | CCWGG | 2 cut(s) | 768, 874 |
| BclI | TGATCA | 1 cut(s) | 163 |
| BcnI | CCSGG | 1 cut(s) | 522 |
| BcoDI | GTCTC | 3 cut(s) | 97, 689, 996 |
| BcuI | ACTAGT | 1 cut(s) | 968 |
| BfaI | CTAG | 1 cut(s) | 969 |
| BfuAI | ACCTGC | 1 cut(s) | 915 |
| BglII | AGATCT | 1 cut(s) | 823 |
| BisI | GCNGC | 1 cut(s) | 483 |
| BlsI | GCNGC | 1 cut(s) | 484 |
| Bme1390I | CCNGG | 3 cut(s) | 522, 768, 874 |
| BmiI | GGNNCC | 5 cut(s) | 756, 869, 878, 929, 986 |
| BmrFI | CCNGG | 3 cut(s) | 522, 768, 874 |
| BmsI | GCATC | 6 cut(s) | 192, 196, 260, 592, 772, 783 |
| BpiI | GAAGAC | 1 cut(s) | 902 |
| BpuEI | CTTGAG | 2 cut(s) | 572, 885 |
| BpuMI | CCSGG | 1 cut(s) | 522 |
| Bsa29I | ATCGAT | 1 cut(s) | 186 |
| BsaBI | GATNNNNATC | 1 cut(s) | 182 |
| BsaJI | CCNNGG | 5 cut(s) | 520, 758, 767, 872, 976 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 684, 714, 842, 872 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 387, 526, 580 |
| Bse1I | ACTGG | 3 cut(s) | 342, 495, 988 |
| Bse3DI | GCAATG | 1 cut(s) | 201 |
| Bse8I | GATNNNNATC | 1 cut(s) | 182 |
| BseBI | CCWGG | 2 cut(s) | 768, 874 |
| BseCI | ATCGAT | 1 cut(s) | 186 |
| BseDI | CCNNGG | 5 cut(s) | 520, 758, 767, 872, 976 |
| BseGI | GGATG | 5 cut(s) | 127, 338, 752, 763, 867 |
| BseJI | GATNNNNATC | 1 cut(s) | 182 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 387, 526, 580 |
| BseMI | GCAATG | 1 cut(s) | 201 |
| BseMII | CTCAG | 3 cut(s) | 108, 471, 1007 |
| BseNI | ACTGG | 3 cut(s) | 342, 495, 988 |
| BseRI | GAGGAG | 1 cut(s) | 797 |
| BseSI | GKGCMC | 2 cut(s) | 719, 872 |
| Bsh1236I | CGCG | 1 cut(s) | 290 |
| BshFI | GGCC | 1 cut(s) | 77 |
| BshNI | GGYRCC | 4 cut(s) | 867, 876, 927, 984 |
| BshVI | ATCGAT | 1 cut(s) | 186 |
| BsiHKAI | GWGCWC | 1 cut(s) | 445 |
| BsiSI | CCGG | 3 cut(s) | 191, 522, 744 |
| BslFI | GGGAC | 1 cut(s) | 320 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 387, 526, 580 |
| BsmAI | GTCTC | 3 cut(s) | 97, 689, 996 |
| BsmFI | GGGAC | 1 cut(s) | 320 |
| BsnI | GGCC | 1 cut(s) | 77 |
| Bsp1286I | GDGCHC | 3 cut(s) | 445, 719, 872 |
| Bsp143I | GATC | 5 cut(s) | 115, 163, 187, 678, 823 |
| Bsp19I | CCATGG | 1 cut(s) | 976 |
| BspACI | CCGC | 1 cut(s) | 483 |
| BspANI | GGCC | 1 cut(s) | 77 |
| BspCNI | CTCAG | 3 cut(s) | 107, 470, 1006 |
| BspDI | ATCGAT | 1 cut(s) | 186 |
| BspFNI | CGCG | 1 cut(s) | 290 |
| BspHI | TCATGA | 2 cut(s) | 151, 166 |
| BspLI | GGNNCC | 5 cut(s) | 756, 869, 878, 929, 986 |
| BspMI | ACCTGC | 1 cut(s) | 915 |
| BspPI | GGATC | 1 cut(s) | 182 |
| BspQI | GCTCTTC | 1 cut(s) | 111 |
| BspT107I | GGYRCC | 4 cut(s) | 867, 876, 927, 984 |
| BsrDI | GCAATG | 1 cut(s) | 201 |
| BsrI | ACTGG | 3 cut(s) | 342, 495, 988 |
| BssECI | CCNNGG | 5 cut(s) | 520, 758, 767, 872, 976 |
| BssMI | GATC | 5 cut(s) | 115, 163, 187, 678, 823 |
| BssT1I | CCWWGG | 1 cut(s) | 976 |
| Bst2UI | CCWGG | 2 cut(s) | 768, 874 |
| Bst4CI | ACNGT | 3 cut(s) | 647, 700, 735 |
| Bst6I | CTCTTC | 2 cut(s) | 111, 216 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 257 |
| BstC8I | GCNNGC | 2 cut(s) | 724, 843 |
| BstDEI | CTNAG | 3 cut(s) | 94, 457, 993 |
| BstDSI | CCRYGG | 2 cut(s) | 758, 976 |
| BstF5I | GGATG | 5 cut(s) | 127, 338, 752, 763, 867 |
| BstFNI | CGCG | 1 cut(s) | 290 |
| BstHHI | GCGC | 1 cut(s) | 743 |
| BstKTI | GATC | 5 cut(s) | 118, 166, 190, 681, 826 |
| BstMAI | GTCTC | 3 cut(s) | 97, 689, 996 |
| BstMBI | GATC | 5 cut(s) | 115, 163, 187, 678, 823 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 95, 215, 248, 257, 329, 462, 723, 876 |
| BstNI | CCWGG | 2 cut(s) | 768, 874 |
| BstSCI | CCNGG | 3 cut(s) | 520, 766, 872 |
| BstSLI | GKGCMC | 2 cut(s) | 719, 872 |
| BstUI | CGCG | 1 cut(s) | 290 |
| BstV2I | GAAGAC | 1 cut(s) | 902 |
| BstX2I | RGATCY | 1 cut(s) | 823 |
| BstYI | RGATCY | 1 cut(s) | 823 |
| Bsu15I | ATCGAT | 1 cut(s) | 186 |
| BsuRI | GGCC | 1 cut(s) | 77 |
| BsuTUI | ATCGAT | 1 cut(s) | 186 |
| BtgI | CCRYGG | 2 cut(s) | 758, 976 |
| BtgZI | GCGATG | 1 cut(s) | 271 |
| BtsCI | GGATG | 5 cut(s) | 127, 338, 752, 763, 867 |
| BtsIMutI | CAGTG | 4 cut(s) | 140, 661, 705, 1001 |
| BveI | ACCTGC | 1 cut(s) | 915 |
| Cac8I | GCNNGC | 2 cut(s) | 724, 843 |
| CaiI | CAGNNNCTG | 1 cut(s) | 101 |
| CciI | TCATGA | 2 cut(s) | 151, 166 |
| CfoI | GCGC | 1 cut(s) | 743 |
| ClaI | ATCGAT | 1 cut(s) | 186 |
| CseI | GACGC | 1 cut(s) | 279 |
| Csp6I | GTAC | 1 cut(s) | 561 |
| CviAII | CATG | 6 cut(s) | 79, 152, 167, 277, 353, 977 |
| CviJI | RGCY | 8 cut(s) | 77, 98, 242, 438, 482, 501, 617, 841 |
| CviKI_1 | RGCY | 8 cut(s) | 77, 98, 242, 438, 482, 501, 617, 841 |
| CviQI | GTAC | 1 cut(s) | 561 |
| DdeI | CTNAG | 3 cut(s) | 94, 457, 993 |
| DpnI | GATC | 5 cut(s) | 117, 165, 189, 680, 825 |
| DpnII | GATC | 5 cut(s) | 115, 163, 187, 678, 823 |
| EaeI | YGGCCR | 1 cut(s) | 75 |
| Eam1104I | CTCTTC | 2 cut(s) | 111, 216 |
| EarI | CTCTTC | 2 cut(s) | 111, 216 |
| Eco130I | CCWWGG | 1 cut(s) | 976 |
| Eco32I | GATATC | 1 cut(s) | 201 |
| EcoRII | CCWGG | 2 cut(s) | 766, 872 |
| EcoRV | GATATC | 1 cut(s) | 201 |
| EcoT14I | CCWWGG | 1 cut(s) | 976 |
| ErhI | CCWWGG | 1 cut(s) | 976 |
| FaeI | CATG | 6 cut(s) | 82, 155, 170, 280, 356, 980 |
| FaqI | GGGAC | 1 cut(s) | 320 |
| FatI | CATG | 6 cut(s) | 78, 151, 166, 276, 352, 976 |
| FbaI | TGATCA | 1 cut(s) | 163 |
| Fnu4HI | GCNGC | 1 cut(s) | 483 |
| FokI | GGATG | 5 cut(s) | 134, 325, 750, 759, 874 |
| Fsp4HI | GCNGC | 1 cut(s) | 483 |
| FspBI | CTAG | 1 cut(s) | 969 |
| GlaI | GCGC | 1 cut(s) | 742 |
| GluI | GCNGC | 1 cut(s) | 483 |
| HaeIII | GGCC | 1 cut(s) | 77 |
| HapII | CCGG | 3 cut(s) | 191, 522, 744 |
| HgaI | GACGC | 1 cut(s) | 279 |
| HhaI | GCGC | 1 cut(s) | 743 |
| Hin1II | CATG | 6 cut(s) | 82, 155, 170, 280, 356, 980 |
| Hin6I | GCGC | 1 cut(s) | 741 |
| HinP1I | GCGC | 1 cut(s) | 741 |
| HinfI | GANTC | 5 cut(s) | 145, 155, 178, 707, 898 |
| HpaII | CCGG | 3 cut(s) | 191, 522, 744 |
| HphI | GGTGA | 1 cut(s) | 688 |
| Hpy188I | TCNGA | 6 cut(s) | 160, 205, 312, 460, 712, 792 |
| Hpy188III | TCNNGA | 6 cut(s) | 113, 119, 152, 167, 587, 682 |
| Hpy99I | CGWCG | 1 cut(s) | 295 |
| HpyAV | CCTTC | 4 cut(s) | 73, 271, 460, 683 |
| HpyCH4III | ACNGT | 3 cut(s) | 647, 700, 735 |
| HpyCH4V | TGCA | 9 cut(s) | 82, 218, 229, 465, 534, 845, 913, 924, 999 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 95, 215, 248, 257, 329, 462, 723, 876 |
| HpyF3I | CTNAG | 3 cut(s) | 94, 457, 993 |
| Hsp92II | CATG | 6 cut(s) | 82, 155, 170, 280, 356, 980 |
| HspAI | GCGC | 1 cut(s) | 741 |
| Ksp22I | TGATCA | 1 cut(s) | 163 |
| Kzo9I | GATC | 5 cut(s) | 115, 163, 187, 678, 823 |
| LguI | GCTCTTC | 1 cut(s) | 111 |
| LmnI | GCTCC | 1 cut(s) | 956 |
| LweI | GCATC | 6 cut(s) | 192, 196, 260, 592, 772, 783 |
| MaeI | CTAG | 1 cut(s) | 969 |
| MaeIII | GTNAC | 2 cut(s) | 54, 971 |
| MalI | GATC | 5 cut(s) | 117, 165, 189, 680, 825 |
| MboI | GATC | 5 cut(s) | 115, 163, 187, 678, 823 |
| MboII | GAAGA | 9 cut(s) | 20, 98, 101, 182, 233, 246, 833, 865, 907 |
| MflI | RGATCY | 1 cut(s) | 823 |
| MhlI | GDGCHC | 3 cut(s) | 445, 719, 872 |
| MluCI | AATT | 4 cut(s) | 567, 578, 932, 1006 |
| MlyI | GAGTC | 3 cut(s) | 164, 716, 892 |
| MseI | TTAA | 2 cut(s) | 798, 1009 |
| MslI | CAYNNNNRTG | 1 cut(s) | 171 |
| MspI | CCGG | 3 cut(s) | 191, 522, 744 |
| MspR9I | CCNGG | 3 cut(s) | 522, 768, 874 |
| MvaI | CCWGG | 2 cut(s) | 768, 874 |
| MvnI | CGCG | 1 cut(s) | 290 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 95, 215, 248, 257, 329, 462, 723, 876 |
| NciI | CCSGG | 1 cut(s) | 522 |
| NcoI | CCATGG | 1 cut(s) | 976 |
| NdeII | GATC | 5 cut(s) | 115, 163, 187, 678, 823 |
| NlaIII | CATG | 6 cut(s) | 82, 155, 170, 280, 356, 980 |
| NlaIV | GGNNCC | 5 cut(s) | 756, 869, 878, 929, 986 |
| PagI | TCATGA | 2 cut(s) | 151, 166 |
| PaqCI | CACCTGC | 1 cut(s) | 915 |
| PciSI | GCTCTTC | 1 cut(s) | 111 |
| PfeI | GAWTC | 2 cut(s) | 145, 178 |
| PkrI | GCNGC | 1 cut(s) | 484 |
| PleI | GAGTC | 3 cut(s) | 163, 715, 892 |
| PpsI | GAGTC | 3 cut(s) | 163, 715, 892 |
| Psp6I | CCWGG | 2 cut(s) | 766, 872 |
| PspGI | CCWGG | 2 cut(s) | 766, 872 |
| PspN4I | GGNNCC | 5 cut(s) | 756, 869, 878, 929, 986 |
| PstNI | CAGNNNCTG | 1 cut(s) | 101 |
| PsuI | RGATCY | 1 cut(s) | 823 |
| RsaI | GTAC | 1 cut(s) | 562 |
| RsaNI | GTAC | 1 cut(s) | 561 |
| RseI | CAYNNNNRTG | 1 cut(s) | 171 |
| SapI | GCTCTTC | 1 cut(s) | 111 |
| SaqAI | TTAA | 2 cut(s) | 798, 1009 |
| SatI | GCNGC | 1 cut(s) | 483 |
| Sau3AI | GATC | 5 cut(s) | 115, 163, 187, 678, 823 |
| SchI | GAGTC | 3 cut(s) | 164, 716, 892 |
| ScrFI | CCNGG | 3 cut(s) | 522, 768, 874 |
| SduI | GDGCHC | 3 cut(s) | 445, 719, 872 |
| SfaNI | GCATC | 6 cut(s) | 192, 196, 260, 592, 772, 783 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 171 |
| SmlI | CTYRAG | 2 cut(s) | 551, 900 |
| SmoI | CTYRAG | 2 cut(s) | 551, 900 |
| SpeI | ACTAGT | 1 cut(s) | 968 |
| Sse9I | AATT | 4 cut(s) | 567, 578, 932, 1006 |
| SsiI | CCGC | 1 cut(s) | 483 |
| SspMI | CTAG | 1 cut(s) | 969 |
| StyD4I | CCNGG | 3 cut(s) | 520, 766, 872 |
| StyI | CCWWGG | 1 cut(s) | 976 |
| TaaI | ACNGT | 3 cut(s) | 647, 700, 735 |
| TaqI | TCGA | 3 cut(s) | 186, 588, 681 |
| TasI | AATT | 4 cut(s) | 567, 578, 932, 1006 |
| TauI | GCSGC | 1 cut(s) | 485 |
| TfiI | GAWTC | 2 cut(s) | 145, 178 |
| Tru1I | TTAA | 2 cut(s) | 798, 1009 |
| Tru9I | TTAA | 2 cut(s) | 798, 1009 |
| TscAI | CASTG | 4 cut(s) | 147, 661, 705, 1001 |
| TspDTI | ATGAA | 4 cut(s) | 137, 183, 253, 369 |
| TspGWI | ACGGA | 1 cut(s) | 747 |
| TspRI | CASTG | 4 cut(s) | 147, 661, 705, 1001 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 383 |
| XspI | CTAG | 1 cut(s) | 969 |