Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000271

Physical Location & Seq

Genomic Coordinates Reverse (-)

83680549 .. 83683677

Gene Structure 3129 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00145790.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1200 bp

ATGATCTCTTCGCGTCACCGAATCGATACTCAACGTTGTAGGTTGAGCAGAGCAATCACCGGGAAGTTGAGAGAAAGCACGGGTTTGCTAAAGCGTATCTTTAGCTTCGCTGGGTTGCGAGGGCGTTACCCTTGCTTCGCTGGTTTGCAACTAGATGACGCCTTCTTCTCCACAACCATTTCCCGTAAGGACAAGTCCAAAGCGATCTCAGATGAGAGCGACACTCCTTCTCCAACCACTCCTGAAGTCAACTTCATCGACCTTTGTTATGATGACAATGATGAAGATGATGACTTTAGGGTTCTTAGGTTTCAACCCTCCTACGCCATTTCAGAAAGCGAAGAAAAACCGAAAATGGGGAATCTTCCAATTCCAATACCAAAAATGATTTGCCATCGTTTTTTTTGTGAAATTTGTGTTGATGACAAGTCTGCCAACGAGTACTTTGGCGTCCAAAATTGCAGCCCTTCTTATTGCGAGGACTGCATAAACAATTACGTGGGATCCAAACTTCAAGAAAATATTACAAGCATCAAGTGCCCTGCCCCTGATTGCAAAGGGTCACTAGACCCTGAGTATTGTCGTTCAATTCTGCCACCTGAGGTGTATGCTAAGTGGGGAAATGCTTTATGTGAGGCTATGATTGTTGGGTCTCAAAGGTTTTACTGTCCCTTTCAGGACTGCTTGGCAATATTGATTGATGATGGGACTGTGGAGGTTGTAAGGGAATCGGAGTGCCCTAATTGTAATAGAATGTTCTGTGCGCAATGCAAAGTTCCTTGGCATGGCTGCACGGAGTTCCAGAAATTGAATAAGGATGAGAGGGAAAAGGAGGATATCATGTTCATGAACATTGCGCAGAATAATCAATGGAGAAGATGTCCAAACTGTAGGGTGTATGTGGAAAAATGGACAGGTTGCGACAACATATACTGCAGGTGCGGAAATTCGTTCTCCTACAAAAGTGGACAGCAAATTTCAAGTAAATATATTATCCCTGGGTGGTGCAGGTGGTACGGACTACGGACGCTATTCGTCGTGGCTTCTTCTTTTTCGTGGCGGACATTAGACGAAGTACTGGAGGAACATCCTAACAACTGTTCGGTCGCTGCCGTCGGTAAAGCTGCTAGTGAAAAATGGAAATCCTTGTCTCGTACCGAGAAAGAATCTTATGTGGCCAAGTCACGAAGTGGTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0012505 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044444 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR zf-C3HC4

Protein Analysis

399

Amino Acids

45.61

Weight (kDa)

6.2

Isoelectric Point (pI)

48.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBR	PF01485	210 - 263	9.9e-08	IBR domain, a half RING-finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000271)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14250
fragaria_vesca	FvH4_1g09490 FvH4_1g09500 FvH4_1g09500 FvH4_1g09510 FvH4_3g00870 FvH4_3g03010 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g35700 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220
malus_domestica	MD02G1102400.v1.1 MD02G1103700.v1.1 MD03G1111900.v1.1 MD09G1173800.v1.1 MD09G1230900.v1.1 MD09G1231400.v1.1 MD15G1224200.v1.1
prunus_persica	Prupe.3G031900_v2.0.a1 Prupe.3G107200_v2.0.a1 Prupe.7G191200_v2.0.a1 Prupe.7G191800_v2.0.a1 Prupe.8G007700_v2.0.a1
pyrus_communis	pycom02g08010 pycom02g08140 pycom09g14980 pycom09g15030 pycom15g19900
rosa_chinensis	RchiOBHm_Chr2g0096041 RchiOBHm_Chr2g0096051 RchiOBHm_Chr2g0096061 RchiOBHm_Chr2g0096071 RchiOBHm_Chr2g0096081 RchiOBHm_Chr2g0096221 RchiOBHm_Chr2g0131511 RchiOBHm_Chr2g0147691 RchiOBHm_Chr5g0001281 RchiOBHm_Chr5g0001301
rosa_laevigata	RLG00000016619 RLG00000016620 RLG00000016621 RLG00000016622 RLG00000019200 RLG00000020271 RLG00000025410 RLG00000030919 RLG00000031102 RLG00000031117 RLG00000031119 RLG00000031120
rosa_multiflora	Rmu_co8160592.1_g000001 Rmu_sc0001706.1_g000008 Rmu_sc0002494.1_g000005 Rmu_sc0004189.1_g000040 Rmu_sc0005612.1_g000008 Rmu_sc0005612.1_g000011 Rmu_sc0005612.1_g000012 Rmu_sc0006926.1_g000015 Rmu_sc0013257.1_g000002 Rmu_sc0034363.1_g000001 Rmu_sc0034363.1_g000002
rosa_roxburghii	Rroxscaffold_1G00072690 Rroxscaffold_1G00075020 Rroxscaffold_2G00145780 Rroxscaffold_2G00145790 Rroxscaffold_2G00145800 Rroxscaffold_2G00145810 Rroxscaffold_2G00145820 Rroxscaffold_2G00145830 Rroxscaffold_4G00300930 Rroxscaffold_6G00424750
rosa_rugosa	Rorug02G0056000 Rorug02G0056100 Rorug02G0056200 Rorug02G0056300 Rorug02G0056500 Rorug02G0056700 Rorug02G0298000.1 Rorug02G0400900 Rorug02G0401000 Rorug02G0401100 Rorug04G0389500 Rorug04G0389600 Rorug04G0389700 Rorug04G0402300
rosa_samantha	Rh2AG103800 Rh2AG458300 Rh2BG105400 Rh2BG105500 Rh2BG105600 Rh2BG105700 Rh2BG105900 Rh2BG357600 Rh2BG471000 Rh2DG106000 Rh2DG106100 Rh2DG106200 Rh2DG106300 Rh2DG106500 Rh2DG375400 Rh2DG480300 Rh5AG009500 Rh5AG009600 Rh5AG010000 Rh5AG028300 Rh5BG012400 Rh5BG012500 Rh5BG012700 Rh5BG028500
rosa_wichuraiana	Rw2G007950 Rw2G007960 Rw2G007970 Rw2G028490 Rw5G000980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	927, 999
Acc16I	TGCGCA	2 cut(s)	765, 858
Acc36I	ACCTGC	2 cut(s)	927, 999
AccII	CGCG	1 cut(s)	13
AciI	CCGC	2 cut(s)	942, 1060
AclI	AACGTT	1 cut(s)	34
AclWI	GGATC	2 cut(s)	498, 511
AcoI	YGGCCR	1 cut(s)	1176
AcsI	RAATTY	3 cut(s)	411, 946, 975
AcuI	CTGAAG	1 cut(s)	264
AcyI	GRCGYC	2 cut(s)	159, 450
AdeI	CACNNNGTG	1 cut(s)	1190
AfaI	GTAC	4 cut(s)	443, 1016, 1077, 1156
AfiI	CCNNNNNNNGG	2 cut(s)	356, 785
AgsI	TTSAA	5 cut(s)	314, 515, 588, 811, 981
AjnI	CCWGG	1 cut(s)	997
AloI	GAACNNNNNNTCC	2 cut(s)	827, 859
AluBI	AGCT	2 cut(s)	105, 1124
AluI	AGCT	2 cut(s)	105, 1124
Alw26I	GTCTC	2 cut(s)	657, 1155
AlwI	GGATC	2 cut(s)	498, 511
AoxI	GGCC	1 cut(s)	1176
ApeKI	GCWGC	4 cut(s)	462, 789, 1109, 1124
ApoI	RAATTY	3 cut(s)	411, 946, 975
AspLEI	GCGC	2 cut(s)	766, 859
AsuC2I	CCSGG	1 cut(s)	61
AsuHPI	GGTGA	2 cut(s)	8, 49
AxyI	CCTNAGG	1 cut(s)	600
BaeGI	GKGCMC	2 cut(s)	542, 740
BalI	TGGCCA	1 cut(s)	1178
BamHI	GGATCC	1 cut(s)	503
BbvI	GCAGC	4 cut(s)	474, 776, 1096, 1111
BccI	CCATC	2 cut(s)	402, 698
BceAI	ACGGC	1 cut(s)	1097
BciT130I	CCWGG	1 cut(s)	999
BcnI	CCSGG	1 cut(s)	61
BcoDI	GTCTC	2 cut(s)	657, 1155
BfaI	CTAG	3 cut(s)	152, 566, 1128
BfmI	CTRYAG	2 cut(s)	889, 934
BfuAI	ACCTGC	2 cut(s)	927, 999
BisI	GCNGC	4 cut(s)	463, 790, 1110, 1125
BlsI	GCNGC	4 cut(s)	464, 791, 1111, 1126
BmcAI	AGTACT	2 cut(s)	443, 1077
Bme1390I	CCNGG	2 cut(s)	61, 999
BmiI	GGNNCC	1 cut(s)	505
BmrFI	CCNGG	2 cut(s)	61, 999
BmsI	GCATC	1 cut(s)	540
BplI	GAGNNNNNCTC	2 cut(s)	208, 240
BpmI	CTGGAG	1 cut(s)	1100
BpuMI	CCSGG	1 cut(s)	61
Bsa29I	ATCGAT	1 cut(s)	24
BsaAI	YACGTR	1 cut(s)	499
BsaHI	GRCGYC	2 cut(s)	159, 450
BsaI	GGTCTC	1 cut(s)	657
BsaJI	CCNNGG	3 cut(s)	779, 997, 998
BsaXI	ACNNNNNCTCC	4 cut(s)	214, 244, 865, 895
Bsc4I	CCNNNNNNNGG	2 cut(s)	356, 785
Bse1I	ACTGG	1 cut(s)	1083
Bse21I	CCTNAGG	1 cut(s)	600
Bse3DI	GCAATG	2 cut(s)	773, 852
BseBI	CCWGG	1 cut(s)	999
BseCI	ATCGAT	1 cut(s)	24
BseDI	CCNNGG	3 cut(s)	779, 997, 998
BseGI	GGATG	2 cut(s)	823, 1087
BseLI	CCNNNNNNNGG	2 cut(s)	356, 785
BseMI	GCAATG	2 cut(s)	773, 852
BseMII	CTCAG	3 cut(s)	222, 564, 591
BseNI	ACTGG	1 cut(s)	1083
BseSI	GKGCMC	2 cut(s)	542, 740
BseXI	GCAGC	4 cut(s)	474, 776, 1096, 1111
BseYI	CCCAGC	1 cut(s)	110
BsgI	GTGCAG	2 cut(s)	775, 1027
Bsh1236I	CGCG	1 cut(s)	13
Bsh1285I	CGRYCG	1 cut(s)	1107
BshFI	GGCC	1 cut(s)	1178
BshVI	ATCGAT	1 cut(s)	24
BsiEI	CGRYCG	1 cut(s)	1107
BsiSI	CCGG	1 cut(s)	60
BslFI	GGGAC	2 cut(s)	654, 721
BslI	CCNNNNNNNGG	2 cut(s)	356, 785
BsmAI	GTCTC	2 cut(s)	657, 1155
BsmFI	GGGAC	2 cut(s)	654, 721
BsnI	GGCC	1 cut(s)	1178
Bso31I	GGTCTC	1 cut(s)	657
Bsp1286I	GDGCHC	2 cut(s)	542, 740
Bsp143I	GATC	3 cut(s)	3, 204, 503
BspACI	CCGC	2 cut(s)	942, 1060
BspANI	GGCC	1 cut(s)	1178
BspCNI	CTCAG	3 cut(s)	221, 565, 592
BspDI	ATCGAT	1 cut(s)	24
BspFNI	CGCG	1 cut(s)	13
BspHI	TCATGA	1 cut(s)	846
BspLI	GGNNCC	1 cut(s)	505
BspMAI	CTGCAG	1 cut(s)	938
BspMI	ACCTGC	2 cut(s)	927, 999
BspPI	GGATC	2 cut(s)	498, 511
BspTNI	GGTCTC	1 cut(s)	657
BsrDI	GCAATG	2 cut(s)	773, 852
BsrI	ACTGG	1 cut(s)	1083
BssECI	CCNNGG	3 cut(s)	779, 997, 998
BssMI	GATC	3 cut(s)	3, 204, 503
BssNI	GRCGYC	2 cut(s)	159, 450
BssT1I	CCWWGG	1 cut(s)	779
Bst2UI	CCWGG	1 cut(s)	999
Bst4CI	ACNGT	4 cut(s)	668, 712, 890, 1100
Bst6I	CTCTTC	1 cut(s)	13
BstACI	GRCGYC	2 cut(s)	159, 450
BstAPI	GCANNNNNTGC	1 cut(s)	537
BstBAI	YACGTR	1 cut(s)	499
BstDEI	CTNAG	5 cut(s)	208, 305, 573, 600, 612
BstF5I	GGATG	2 cut(s)	823, 1087
BstFNI	CGCG	1 cut(s)	13
BstHHI	GCGC	2 cut(s)	766, 859
BstKTI	GATC	3 cut(s)	6, 207, 506
BstMAI	GTCTC	2 cut(s)	657, 1155
BstMBI	GATC	3 cut(s)	3, 204, 503
BstMCI	CGRYCG	1 cut(s)	1107
BstMWI	GCNNNNNNNGC	2 cut(s)	483, 537
BstNI	CCWGG	1 cut(s)	999
BstSCI	CCNGG	2 cut(s)	59, 997
BstSFI	CTRYAG	2 cut(s)	889, 934
BstSLI	GKGCMC	2 cut(s)	542, 740
BstUI	CGCG	1 cut(s)	13
BstV1I	GCAGC	4 cut(s)	474, 776, 1096, 1111
BstX2I	RGATCY	1 cut(s)	503
BstYI	RGATCY	1 cut(s)	503
Bsu15I	ATCGAT	1 cut(s)	24
Bsu36I	CCTNAGG	1 cut(s)	600
BsuRI	GGCC	1 cut(s)	1178
BsuTUI	ATCGAT	1 cut(s)	24
BtsCI	GGATG	2 cut(s)	823, 1087
BveI	ACCTGC	2 cut(s)	927, 999
CciI	TCATGA	1 cut(s)	846
CfoI	GCGC	2 cut(s)	766, 859
ClaI	ATCGAT	1 cut(s)	24
CseI	GACGC	4 cut(s)	2, 167, 439, 1036
Csp6I	GTAC	4 cut(s)	442, 1015, 1076, 1155
CviAII	CATG	3 cut(s)	785, 841, 847
CviJI	RGCY	7 cut(s)	105, 465, 638, 789, 1043, 1124, 1178
CviKI_1	RGCY	7 cut(s)	105, 465, 638, 789, 1043, 1124, 1178
CviQI	GTAC	4 cut(s)	442, 1015, 1076, 1155
DdeI	CTNAG	5 cut(s)	208, 305, 573, 600, 612
DpnI	GATC	3 cut(s)	5, 206, 505
DpnII	GATC	3 cut(s)	3, 204, 503
DraIII	CACNNNGTG	1 cut(s)	1190
EaeI	YGGCCR	1 cut(s)	1176
Eam1104I	CTCTTC	1 cut(s)	13
EarI	CTCTTC	1 cut(s)	13
EciI	GGCGGA	1 cut(s)	1075
Eco130I	CCWWGG	1 cut(s)	779
Eco31I	GGTCTC	1 cut(s)	657
Eco32I	GATATC	1 cut(s)	838
Eco57I	CTGAAG	1 cut(s)	264
Eco81I	CCTNAGG	1 cut(s)	600
EcoRII	CCWGG	1 cut(s)	997
EcoRV	GATATC	1 cut(s)	838
EcoT14I	CCWWGG	1 cut(s)	779
ErhI	CCWWGG	1 cut(s)	779
FaeI	CATG	3 cut(s)	788, 844, 850
FalI	AAGNNNNNCTT	2 cut(s)	83, 115
FaqI	GGGAC	2 cut(s)	654, 721
FatI	CATG	3 cut(s)	784, 840, 846
Fnu4HI	GCNGC	4 cut(s)	463, 790, 1110, 1125
FokI	GGATG	2 cut(s)	830, 1074
Fsp4HI	GCNGC	4 cut(s)	463, 790, 1110, 1125
FspBI	CTAG	3 cut(s)	152, 566, 1128
FspI	TGCGCA	2 cut(s)	765, 858
GlaI	GCGC	2 cut(s)	765, 858
GluI	GCNGC	4 cut(s)	463, 790, 1110, 1125
GsaI	CCCAGC	1 cut(s)	114
GsuI	CTGGAG	1 cut(s)	1100
HaeIII	GGCC	1 cut(s)	1178
HapII	CCGG	1 cut(s)	60
HgaI	GACGC	4 cut(s)	2, 167, 439, 1036
HhaI	GCGC	2 cut(s)	766, 859
Hin1I	GRCGYC	2 cut(s)	159, 450
Hin1II	CATG	3 cut(s)	788, 844, 850
Hin6I	GCGC	2 cut(s)	764, 857
HinP1I	GCGC	2 cut(s)	764, 857
HincII	GTYRAC	1 cut(s)	250
HindII	GTYRAC	1 cut(s)	250
HinfI	GANTC	4 cut(s)	21, 361, 728, 1166
HpaII	CCGG	1 cut(s)	60
HphI	GGTGA	2 cut(s)	8, 49
Hpy166II	GTNNAC	2 cut(s)	250, 968
Hpy188I	TCNGA	3 cut(s)	211, 334, 733
Hpy188III	TCNNGA	6 cut(s)	242, 515, 677, 802, 847, 1185
Hpy8I	GTNNAC	2 cut(s)	250, 968
Hpy99I	CGWCG	2 cut(s)	1040, 1118
HpyAV	CCTTC	3 cut(s)	172, 237, 477
HpyCH4III	ACNGT	4 cut(s)	668, 712, 890, 1100
HpyCH4IV	ACGT	2 cut(s)	34, 498
HpyCH4V	TGCA	8 cut(s)	148, 462, 486, 555, 771, 792, 936, 1008
HpyF10VI	GCNNNNNNNGC	2 cut(s)	483, 537
HpyF3I	CTNAG	5 cut(s)	208, 305, 573, 600, 612
HpySE526I	ACGT	2 cut(s)	34, 498
Hsp92I	GRCGYC	2 cut(s)	159, 450
Hsp92II	CATG	3 cut(s)	788, 844, 850
HspAI	GCGC	2 cut(s)	764, 857
Kzo9I	GATC	3 cut(s)	3, 204, 503
Lsp1109I	GCAGC	4 cut(s)	474, 776, 1096, 1111
LweI	GCATC	1 cut(s)	540
MaeI	CTAG	3 cut(s)	152, 566, 1128
MaeII	ACGT	2 cut(s)	34, 498
MaeIII	GTNAC	5 cut(s)	14, 125, 561, 1182, 1193
MalI	GATC	3 cut(s)	5, 206, 505
MboI	GATC	3 cut(s)	3, 204, 503
MboII	GAAGA	6 cut(s)	157, 296, 353, 356, 888, 1038
MflI	RGATCY	1 cut(s)	503
MhlI	GDGCHC	2 cut(s)	542, 740
MlsI	TGGCCA	1 cut(s)	1178
MluCI	AATT	9 cut(s)	369, 411, 457, 493, 588, 742, 806, 946, 975
MluNI	TGGCCA	1 cut(s)	1178
MmeI	TCCRAC	1 cut(s)	257
MnlI	CCTC	9 cut(s)	113, 328, 472, 595, 628, 709, 816, 826, 1075
Mox20I	TGGCCA	1 cut(s)	1178
MscI	TGGCCA	1 cut(s)	1178
MslI	CAYNNNNRTG	1 cut(s)	845
Msp20I	TGGCCA	1 cut(s)	1178
MspI	CCGG	1 cut(s)	60
MspR9I	CCNGG	2 cut(s)	61, 999
MvaI	CCWGG	1 cut(s)	999
MvnI	CGCG	1 cut(s)	13
MwoI	GCNNNNNNNGC	2 cut(s)	483, 537
NciI	CCSGG	1 cut(s)	61
NdeII	GATC	3 cut(s)	3, 204, 503
NlaIII	CATG	3 cut(s)	788, 844, 850
NlaIV	GGNNCC	1 cut(s)	505
NmuCI	GTSAC	4 cut(s)	14, 561, 1182, 1193
NsbI	TGCGCA	2 cut(s)	765, 858
PagI	TCATGA	1 cut(s)	846
PaqCI	CACCTGC	2 cut(s)	927, 999
PasI	CCCWGGG	1 cut(s)	998
PfeI	GAWTC	4 cut(s)	21, 361, 728, 1166
PkrI	GCNGC	4 cut(s)	464, 791, 1111, 1126
Ppu21I	YACGTR	1 cut(s)	499
Psp1406I	AACGTT	1 cut(s)	34
Psp6I	CCWGG	1 cut(s)	997
PspFI	CCCAGC	1 cut(s)	110
PspGI	CCWGG	1 cut(s)	997
PspN4I	GGNNCC	1 cut(s)	505
PstI	CTGCAG	1 cut(s)	938
PsuI	RGATCY	1 cut(s)	503
RsaI	GTAC	4 cut(s)	443, 1016, 1077, 1156
RsaNI	GTAC	4 cut(s)	442, 1015, 1076, 1155
RseI	CAYNNNNRTG	1 cut(s)	845
SatI	GCNGC	4 cut(s)	463, 790, 1110, 1125
Sau3AI	GATC	3 cut(s)	3, 204, 503
ScaI	AGTACT	2 cut(s)	443, 1077
ScrFI	CCNGG	2 cut(s)	61, 999
SduI	GDGCHC	2 cut(s)	542, 740
SfaNI	GCATC	1 cut(s)	540
SfcI	CTRYAG	2 cut(s)	889, 934
SmiMI	CAYNNNNRTG	1 cut(s)	845
Sse9I	AATT	9 cut(s)	369, 411, 457, 493, 588, 742, 806, 946, 975
SsiI	CCGC	2 cut(s)	942, 1060
SspI	AATATT	2 cut(s)	523, 693
SspMI	CTAG	3 cut(s)	152, 566, 1128
StyD4I	CCNGG	2 cut(s)	59, 997
StyI	CCWWGG	1 cut(s)	779
TaaI	ACNGT	4 cut(s)	668, 712, 890, 1100
TaiI	ACGT	2 cut(s)	37, 501
TaqI	TCGA	2 cut(s)	24, 258
TaqII	GACCGA	1 cut(s)	1093
TasI	AATT	9 cut(s)	369, 411, 457, 493, 588, 742, 806, 946, 975
TatI	WGTACW	2 cut(s)	441, 1075
TfiI	GAWTC	4 cut(s)	21, 361, 728, 1166
TseFI	GTSAC	4 cut(s)	14, 561, 1182, 1193
TseI	GCWGC	4 cut(s)	462, 789, 1109, 1124
Tsp45I	GTSAC	4 cut(s)	14, 561, 1182, 1193
TspDTI	ATGAA	4 cut(s)	244, 297, 835, 863
TspGWI	ACGGA	3 cut(s)	809, 1032, 1039
XapI	RAATTY	3 cut(s)	411, 946, 975
XspI	CTAG	3 cut(s)	152, 566, 1128
ZrmI	AGTACT	2 cut(s)	443, 1077

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.