Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0000271

Physical Location & Seq

Genomic Coordinates Reverse (-)

693368 .. 694854

Gene Structure 1487 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000030919

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1119 bp

ATGGAGTTTCTGAATCGGTTGCTCCGATGTCAAATCTGCCGGAACGCATTTGAAGCTCATGAATCGCGGGATGGTCTCAGGGATCAATTTCCAAATCATCAAGAGCCAACGCAATTAAACACATTCTGGACACAGTGCCCCTTTTGTTGCGCAATGTCTCAATACCGCAGAGACATTCTGGATCGCTTGGTCAATTGTCAGATATGCTGTCAAGCATTTGGTGCTCATGAAATGAAGAAAGGCGATCAATCTCTCAAGAATCAATTTAAAGATACCCTGAAATCCGCCCCGAGTCCCGCTAAAGCAGGTAACTTCATCGATCTCTTTGCTGAAACCTTGAACTATTACGATAGTGATGGAGAGATTGCCTTGGATCCCGAGTATTGCCATTCGATTCTGAAACCCGAGGTGTTTGAAAAATGGGGGACAAGGTTGTGCGAGGATGTGATTATTGGATCTCAGAAATTTTACTGCCCCTTTGAGGACTGCTCCGCAATGTTGATCGACGATGGGCCAGAGATAGTGAGGGAATCGGAGTGCCCTAATTGTAAAAGATTGTTCTGTGCGCAGTGTAAGGTTCCTTGGCACGCCGGGATTACTTGTGACGAGGTTAAGAAGCTGAATAAGAACGATACTGAAAAGGATGATCTTATTATGGAGAAACTTGCTTACAAGAAGCACTGGAGAAAGTGCCCAACGTGTGGGGTTTATGTGGAAAACATCAGCAGGCTGCACAACAATACGATGCAGGTCTGTTTATCTTTCTGCTCTCTTCATTTGATTATTTATGCCATATATATATATATATATATATATATATATATATATATTTTGGAGTGCGGGACTTGTTTCGACTTCCATTGTGGACGACTGGGTTGTCCTTTTTGTGGAAAACTCAGAAAGAACGATGGTAGAACTATGGGCTACTTCGTATTCATGAAGGAGTACAGAAGGATTCAGCGGGACCGGGGGCAACCCTATAATCAAGCTACTGCTAAACTTGCTATTGAGAAATGGAGATCCATGTCTCGTTCTGATAAAAAGCCCTATGAGAACCCAGAGATGGAACCGATTAGAATCTACCCGCGGCGGTCGAAGATGTCGAGTAAAGAAGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0012505 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044444 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR zf-C3HC4

Protein Analysis

373

Amino Acids

43.59

Weight (kDa)

8.18

Isoelectric Point (pI)

46.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBR	PF01485	145 - 201	2.4e-10	IBR domain, a half RING-finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000271)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14250
fragaria_vesca	FvH4_1g09490 FvH4_1g09500 FvH4_1g09500 FvH4_1g09510 FvH4_3g00870 FvH4_3g03010 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g35700 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220
malus_domestica	MD02G1102400.v1.1 MD02G1103700.v1.1 MD03G1111900.v1.1 MD09G1173800.v1.1 MD09G1230900.v1.1 MD09G1231400.v1.1 MD15G1224200.v1.1
prunus_persica	Prupe.3G031900_v2.0.a1 Prupe.3G107200_v2.0.a1 Prupe.7G191200_v2.0.a1 Prupe.7G191800_v2.0.a1 Prupe.8G007700_v2.0.a1
pyrus_communis	pycom02g08010 pycom02g08140 pycom09g14980 pycom09g15030 pycom15g19900
rosa_chinensis	RchiOBHm_Chr2g0096041 RchiOBHm_Chr2g0096051 RchiOBHm_Chr2g0096061 RchiOBHm_Chr2g0096071 RchiOBHm_Chr2g0096081 RchiOBHm_Chr2g0096221 RchiOBHm_Chr2g0131511 RchiOBHm_Chr2g0147691 RchiOBHm_Chr5g0001281 RchiOBHm_Chr5g0001301
rosa_laevigata	RLG00000016619 RLG00000016620 RLG00000016621 RLG00000016622 RLG00000019200 RLG00000020271 RLG00000025410 RLG00000030919 RLG00000031102 RLG00000031117 RLG00000031119 RLG00000031120
rosa_multiflora	Rmu_co8160592.1_g000001 Rmu_sc0001706.1_g000008 Rmu_sc0002494.1_g000005 Rmu_sc0004189.1_g000040 Rmu_sc0005612.1_g000008 Rmu_sc0005612.1_g000011 Rmu_sc0005612.1_g000012 Rmu_sc0006926.1_g000015 Rmu_sc0013257.1_g000002 Rmu_sc0034363.1_g000001 Rmu_sc0034363.1_g000002
rosa_roxburghii	Rroxscaffold_1G00072690 Rroxscaffold_1G00075020 Rroxscaffold_2G00145780 Rroxscaffold_2G00145790 Rroxscaffold_2G00145800 Rroxscaffold_2G00145810 Rroxscaffold_2G00145820 Rroxscaffold_2G00145830 Rroxscaffold_4G00300930 Rroxscaffold_6G00424750
rosa_rugosa	Rorug02G0056000 Rorug02G0056100 Rorug02G0056200 Rorug02G0056300 Rorug02G0056500 Rorug02G0056700 Rorug02G0298000.1 Rorug02G0400900 Rorug02G0401000 Rorug02G0401100 Rorug04G0389500 Rorug04G0389600 Rorug04G0389700 Rorug04G0402300
rosa_samantha	Rh2AG103800 Rh2AG458300 Rh2BG105400 Rh2BG105500 Rh2BG105600 Rh2BG105700 Rh2BG105900 Rh2BG357600 Rh2BG471000 Rh2DG106000 Rh2DG106100 Rh2DG106200 Rh2DG106300 Rh2DG106500 Rh2DG375400 Rh2DG480300 Rh5AG009500 Rh5AG009600 Rh5AG010000 Rh5AG028300 Rh5BG012400 Rh5BG012500 Rh5BG012700 Rh5BG028500
rosa_wichuraiana	Rw2G007950 Rw2G007960 Rw2G007970 Rw2G028490 Rw5G000980

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	876
Acc16I	TGCGCA	2 cut(s)	151, 567
Acc36I	ACCTGC	2 cut(s)	296, 739
AccB7I	CCANNNNNTGG	1 cut(s)	701
AccII	CGCG	2 cut(s)	67, 1087
AclWI	GGATC	6 cut(s)	90, 189, 368, 381, 463, 1014
AcsI	RAATTY	1 cut(s)	464
AfaI	GTAC	1 cut(s)	947
AfiI	CCNNNNNNNGG	4 cut(s)	481, 701, 887, 1063
AflIII	ACRYGT	1 cut(s)	698
AgsI	TTSAA	3 cut(s)	53, 340, 416
AluBI	AGCT	3 cut(s)	56, 619, 989
AluI	AGCT	3 cut(s)	56, 619, 989
Alw21I	GWGCWC	1 cut(s)	226
Alw26I	GTCTC	4 cut(s)	80, 162, 165, 1032
AlwI	GGATC	6 cut(s)	90, 189, 368, 381, 463, 1014
Ama87I	CYCGRG	3 cut(s)	289, 377, 404
AoxI	GGCC	1 cut(s)	512
ApeKI	GCWGC	1 cut(s)	730
ApoI	RAATTY	1 cut(s)	464
AspLEI	GCGC	2 cut(s)	152, 568
AspS9I	GGNCC	2 cut(s)	512, 964
AsuC2I	CCSGG	2 cut(s)	592, 968
AvaI	CYCGRG	3 cut(s)	289, 377, 404
AvaII	GGWCC	1 cut(s)	964
BaeGI	GKGCMC	3 cut(s)	140, 542, 695
BamHI	GGATCC	1 cut(s)	373
Bbv12I	GWGCWC	1 cut(s)	226
BbvI	GCAGC	1 cut(s)	717
BccI	CCATC	5 cut(s)	65, 350, 503, 902, 1057
BcgI	CGANNNNNNTGC	2 cut(s)	308, 342
BcnI	CCSGG	2 cut(s)	592, 968
BcoDI	GTCTC	4 cut(s)	80, 162, 165, 1032
BfuAI	ACCTGC	2 cut(s)	296, 739
BisI	GCNGC	2 cut(s)	731, 1088
BlsI	GCNGC	2 cut(s)	732, 1089
Bme1390I	CCNGG	2 cut(s)	592, 968
Bme18I	GGWCC	1 cut(s)	964
BmeT110I	CYCGRG	3 cut(s)	289, 377, 404
BmgT120I	GGNCC	2 cut(s)	512, 964
BmiI	GGNNCC	4 cut(s)	375, 579, 965, 1068
BmrFI	CCNGG	2 cut(s)	592, 968
BmrI	ACTGGG	1 cut(s)	881
BmsI	GCATC	1 cut(s)	735
BmuI	ACTGGG	1 cut(s)	881
BplI	GAGNNNNNCTC	2 cut(s)	473, 505
BpmI	CTGGAG	1 cut(s)	703
BpuEI	CTTGAG	1 cut(s)	239
BpuMI	CCSGG	2 cut(s)	592, 968
Bsa29I	ATCGAT	1 cut(s)	318
BsaBI	GATNNNNATC	1 cut(s)	1076
BsaI	GGTCTC	1 cut(s)	80
BsaJI	CCNNGG	5 cut(s)	369, 405, 581, 967, 1085
Bsc4I	CCNNNNNNNGG	4 cut(s)	481, 701, 887, 1063
Bse1I	ACTGG	2 cut(s)	686, 876
Bse3DI	GCAATG	2 cut(s)	159, 501
Bse8I	GATNNNNATC	1 cut(s)	1076
BseCI	ATCGAT	1 cut(s)	318
BseDI	CCNNGG	5 cut(s)	369, 405, 581, 967, 1085
BseGI	GGATG	3 cut(s)	76, 448, 649
BseJI	GATNNNNATC	1 cut(s)	1076
BseLI	CCNNNNNNNGG	4 cut(s)	481, 701, 887, 1063
BseMI	GCAATG	2 cut(s)	159, 501
BseMII	CTCAG	3 cut(s)	91, 473, 910
BseNI	ACTGG	2 cut(s)	686, 876
BseSI	GKGCMC	3 cut(s)	140, 542, 695
BseXI	GCAGC	1 cut(s)	717
BsgI	GTGCAG	1 cut(s)	716
Bsh1236I	CGCG	2 cut(s)	67, 1087
Bsh1285I	CGRYCG	1 cut(s)	1094
BshFI	GGCC	1 cut(s)	514
BshVI	ATCGAT	1 cut(s)	318
BsiEI	CGRYCG	1 cut(s)	1094
BsiHKAI	GWGCWC	1 cut(s)	226
BsiHKCI	CYCGRG	3 cut(s)	289, 377, 404
BsiSI	CCGG	3 cut(s)	40, 591, 967
BslFI	GGGAC	4 cut(s)	279, 439, 856, 977
BslI	CCNNNNNNNGG	4 cut(s)	481, 701, 887, 1063
BsmAI	GTCTC	4 cut(s)	80, 162, 165, 1032
BsmFI	GGGAC	4 cut(s)	279, 439, 856, 977
BsnI	GGCC	1 cut(s)	514
Bso31I	GGTCTC	1 cut(s)	80
BsoBI	CYCGRG	3 cut(s)	289, 377, 404
Bsp1286I	GDGCHC	4 cut(s)	140, 226, 542, 695
Bsp143I	GATC	9 cut(s)	82, 181, 244, 319, 373, 455, 501, 646, 1019
BspANI	GGCC	1 cut(s)	514
BspCNI	CTCAG	3 cut(s)	90, 472, 909
BspDI	ATCGAT	1 cut(s)	318
BspFNI	CGCG	2 cut(s)	67, 1087
BspHI	TCATGA	3 cut(s)	58, 226, 936
BspLI	GGNNCC	4 cut(s)	375, 579, 965, 1068
BspMI	ACCTGC	2 cut(s)	296, 739
BspPI	GGATC	6 cut(s)	90, 189, 368, 381, 463, 1014
BspTNI	GGTCTC	1 cut(s)	80
BsrDI	GCAATG	2 cut(s)	159, 501
BsrI	ACTGG	2 cut(s)	686, 876
BssECI	CCNNGG	5 cut(s)	369, 405, 581, 967, 1085
BssMI	GATC	9 cut(s)	82, 181, 244, 319, 373, 455, 501, 646, 1019
BssT1I	CCWWGG	2 cut(s)	369, 581
Bst4CI	ACNGT	1 cut(s)	135
Bst6I	CTCTTC	1 cut(s)	777
BstAPI	GCANNNNNTGC	1 cut(s)	221
BstC8I	GCNNGC	2 cut(s)	588, 728
BstDEI	CTNAG	3 cut(s)	77, 459, 896
BstDSI	CCRYGG	1 cut(s)	1085
BstF5I	GGATG	3 cut(s)	76, 448, 649
BstFNI	CGCG	2 cut(s)	67, 1087
BstHHI	GCGC	2 cut(s)	152, 568
BstKTI	GATC	9 cut(s)	85, 184, 247, 322, 376, 458, 504, 649, 1022
BstMAI	GTCTC	4 cut(s)	80, 162, 165, 1032
BstMBI	GATC	9 cut(s)	82, 181, 244, 319, 373, 455, 501, 646, 1019
BstMCI	CGRYCG	1 cut(s)	1094
BstMWI	GCNNNNNNNGC	3 cut(s)	53, 221, 1001
BstSCI	CCNGG	2 cut(s)	590, 966
BstSLI	GKGCMC	3 cut(s)	140, 542, 695
BstUI	CGCG	2 cut(s)	67, 1087
BstV1I	GCAGC	1 cut(s)	717
BstX2I	RGATCY	3 cut(s)	373, 455, 1019
BstYI	RGATCY	3 cut(s)	373, 455, 1019
Bsu15I	ATCGAT	1 cut(s)	318
BsuRI	GGCC	1 cut(s)	514
BsuTUI	ATCGAT	1 cut(s)	318
BtgI	CCRYGG	1 cut(s)	1085
BtsCI	GGATG	3 cut(s)	76, 448, 649
BtsI	GCAGTG	1 cut(s)	575
BtsIMutI	CAGTG	3 cut(s)	140, 575, 679
BveI	ACCTGC	2 cut(s)	296, 739
Cac8I	GCNNGC	2 cut(s)	588, 728
CciI	TCATGA	3 cut(s)	58, 226, 936
CfoI	GCGC	2 cut(s)	152, 568
Cfr13I	GGNCC	2 cut(s)	512, 964
Cfr42I	CCGCGG	1 cut(s)	1088
ClaI	ATCGAT	1 cut(s)	318
Csp6I	GTAC	1 cut(s)	946
CviAII	CATG	4 cut(s)	59, 227, 937, 1024
CviJI	RGCY	8 cut(s)	56, 106, 514, 619, 730, 924, 989, 1045
CviKI_1	RGCY	8 cut(s)	56, 106, 514, 619, 730, 924, 989, 1045
CviQI	GTAC	1 cut(s)	946
DdeI	CTNAG	3 cut(s)	77, 459, 896
DpnI	GATC	9 cut(s)	84, 183, 246, 321, 375, 457, 503, 648, 1021
DpnII	GATC	9 cut(s)	82, 181, 244, 319, 373, 455, 501, 646, 1019
DraI	TTTAAA	1 cut(s)	268
DrdI	GACNNNNNNGTC	1 cut(s)	876
DseDI	GACNNNNNNGTC	1 cut(s)	876
Eam1104I	CTCTTC	1 cut(s)	777
EarI	CTCTTC	1 cut(s)	777
EciI	GGCGGA	1 cut(s)	274
Eco130I	CCWWGG	2 cut(s)	369, 581
Eco31I	GGTCTC	1 cut(s)	80
Eco47I	GGWCC	1 cut(s)	964
Eco88I	CYCGRG	3 cut(s)	289, 377, 404
EcoT14I	CCWWGG	2 cut(s)	369, 581
ErhI	CCWWGG	2 cut(s)	369, 581
FaeI	CATG	4 cut(s)	62, 230, 940, 1027
FaqI	GGGAC	4 cut(s)	279, 439, 856, 977
FatI	CATG	4 cut(s)	58, 226, 936, 1023
FauI	CCCGC	5 cut(s)	60, 304, 833, 954, 1092
Fnu4HI	GCNGC	2 cut(s)	731, 1088
FokI	GGATG	3 cut(s)	83, 455, 656
Fsp4HI	GCNGC	2 cut(s)	731, 1088
FspI	TGCGCA	2 cut(s)	151, 567
GlaI	GCGC	2 cut(s)	151, 567
GluI	GCNGC	2 cut(s)	731, 1088
GsuI	CTGGAG	1 cut(s)	703
HaeIII	GGCC	1 cut(s)	514
HapII	CCGG	3 cut(s)	40, 591, 967
HhaI	GCGC	2 cut(s)	152, 568
Hin1II	CATG	4 cut(s)	62, 230, 940, 1027
Hin6I	GCGC	2 cut(s)	150, 566
HinP1I	GCGC	2 cut(s)	150, 566
HinfI	GANTC	8 cut(s)	13, 62, 259, 292, 394, 530, 955, 1077
HpaII	CCGG	3 cut(s)	40, 591, 967
Hpy166II	GTNNAC	1 cut(s)	866
Hpy188I	TCNGA	8 cut(s)	12, 26, 201, 399, 462, 535, 899, 1036
Hpy188III	TCNNGA	8 cut(s)	59, 101, 127, 179, 227, 256, 377, 937
Hpy8I	GTNNAC	1 cut(s)	866
Hpy99I	CGWCG	1 cut(s)	509
HpyAV	CCTTC	3 cut(s)	934, 945, 1106
HpyCH4III	ACNGT	1 cut(s)	135
HpyCH4IV	ACGT	1 cut(s)	698
HpyCH4V	TGCA	2 cut(s)	733, 748
HpyF10VI	GCNNNNNNNGC	3 cut(s)	53, 221, 1001
HpyF3I	CTNAG	3 cut(s)	77, 459, 896
HpySE526I	ACGT	1 cut(s)	698
Hsp92II	CATG	4 cut(s)	62, 230, 940, 1027
HspAI	GCGC	2 cut(s)	150, 566
KspI	CCGCGG	1 cut(s)	1088
Kzo9I	GATC	9 cut(s)	82, 181, 244, 319, 373, 455, 501, 646, 1019
LmnI	GCTCC	2 cut(s)	27, 494
Lsp1109I	GCAGC	1 cut(s)	717
LweI	GCATC	1 cut(s)	735
MaeII	ACGT	1 cut(s)	698
MaeIII	GTNAC	2 cut(s)	308, 602
MalI	GATC	9 cut(s)	84, 183, 246, 321, 375, 457, 503, 648, 1021
MboI	GATC	9 cut(s)	82, 181, 244, 319, 373, 455, 501, 646, 1019
MboII	GAAGA	3 cut(s)	247, 764, 1108
MfeI	CAATTG	1 cut(s)	193
MflI	RGATCY	3 cut(s)	373, 455, 1019
MhlI	GDGCHC	4 cut(s)	140, 226, 542, 695
MluCI	AATT	6 cut(s)	86, 113, 193, 263, 464, 544
MlyI	GAGTC	1 cut(s)	301
MnlI	CCTC	5 cut(s)	400, 433, 475, 519, 601
MseI	TTAA	3 cut(s)	116, 267, 612
MspA1I	CMGCKG	2 cut(s)	961, 1087
MspI	CCGG	3 cut(s)	40, 591, 967
MspR9I	CCNGG	2 cut(s)	592, 968
MunI	CAATTG	1 cut(s)	193
MvnI	CGCG	2 cut(s)	67, 1087
MwoI	GCNNNNNNNGC	3 cut(s)	53, 221, 1001
NciI	CCSGG	2 cut(s)	592, 968
NdeII	GATC	9 cut(s)	82, 181, 244, 319, 373, 455, 501, 646, 1019
NlaIII	CATG	4 cut(s)	62, 230, 940, 1027
NlaIV	GGNNCC	4 cut(s)	375, 579, 965, 1068
NmuCI	GTSAC	1 cut(s)	602
NsbI	TGCGCA	2 cut(s)	151, 567
PagI	TCATGA	3 cut(s)	58, 226, 936
PcsI	WCGNNNNNNNCGW	2 cut(s)	22, 1100
PfeI	GAWTC	7 cut(s)	13, 62, 259, 394, 530, 955, 1077
PflMI	CCANNNNNTGG	1 cut(s)	701
PkrI	GCNGC	2 cut(s)	732, 1089
PleI	GAGTC	1 cut(s)	300
PpsI	GAGTC	1 cut(s)	300
PspN4I	GGNNCC	4 cut(s)	375, 579, 965, 1068
PspPI	GGNCC	2 cut(s)	512, 964
PsuI	RGATCY	3 cut(s)	373, 455, 1019
RsaI	GTAC	1 cut(s)	947
RsaNI	GTAC	1 cut(s)	946
SacII	CCGCGG	1 cut(s)	1088
SaqAI	TTAA	3 cut(s)	116, 267, 612
SatI	GCNGC	2 cut(s)	731, 1088
Sau3AI	GATC	9 cut(s)	82, 181, 244, 319, 373, 455, 501, 646, 1019
Sau96I	GGNCC	2 cut(s)	512, 964
SchI	GAGTC	1 cut(s)	301
ScrFI	CCNGG	2 cut(s)	592, 968
SduI	GDGCHC	4 cut(s)	140, 226, 542, 695
SfaNI	GCATC	1 cut(s)	735
Sfr303I	CCGCGG	1 cut(s)	1088
SgrBI	CCGCGG	1 cut(s)	1088
SinI	GGWCC	1 cut(s)	964
SmlI	CTYRAG	1 cut(s)	254
SmoI	CTYRAG	1 cut(s)	254
Sse9I	AATT	6 cut(s)	86, 113, 193, 263, 464, 544
StyD4I	CCNGG	2 cut(s)	590, 966
StyI	CCWWGG	2 cut(s)	369, 581
TaaI	ACNGT	1 cut(s)	135
TaiI	ACGT	1 cut(s)	701
TaqI	TCGA	6 cut(s)	318, 392, 504, 852, 1094, 1103
TasI	AATT	6 cut(s)	86, 113, 193, 263, 464, 544
TatI	WGTACW	1 cut(s)	945
TauI	GCSGC	1 cut(s)	1090
TfiI	GAWTC	7 cut(s)	13, 62, 259, 394, 530, 955, 1077
Tru1I	TTAA	3 cut(s)	116, 267, 612
Tru9I	TTAA	3 cut(s)	116, 267, 612
TscAI	CASTG	3 cut(s)	140, 575, 686
TseFI	GTSAC	1 cut(s)	602
TseI	GCWGC	1 cut(s)	730
Tsp45I	GTSAC	1 cut(s)	602
TspDTI	ATGAA	7 cut(s)	75, 243, 248, 304, 764, 925, 953
TspRI	CASTG	3 cut(s)	140, 575, 686
Van91I	CCANNNNNTGG	1 cut(s)	701
VpaK11BI	GGWCC	1 cut(s)	964
XapI	RAATTY	1 cut(s)	464

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.