Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000271

Physical Location & Seq

Genomic Coordinates Forward (+)

7788911 .. 7790827

Gene Structure 1917 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G007950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1041 bp

ATGCTCACCTCCAAACCCTCTCACTCTCACTCTCACTCTCCAGTTCAAATTCTCACCGTCGACGACGAAGCCGGCGCTGACGTCATCTTCCTTCCGATTCCCCACAGCTCCTCCTCCGCCGCGGTCGCCCTCCACGACGATCGAAAAGACCCATCTGCCCCCAGATCATCTCCCTCCCCGACCAAAGTACCCACCTTTATCGACCTCTCCGACGAACCCGACGACGGAGACGACGACGAGATTCGGATTCTCCGATTCAAACCCACCAAAACCCACTTCAAAAAGCGAAGAACAAACCCGTTTACATCCGGGTCCGTATCGGAACCCGGCCAGTCCTCCTCCGATTCTCTCACGGACTACCCACCATTCGTGTGTGCTATTTGCGCCGACGACAAGCCTGGGTACCAATCTTTTCCGATCGAGAATTGCAACCATGTGTATTGCTCCGATTGTGTGATCAACTACATCGATTCCAAGCTCCAAGAAAACGAACCCACGATTCGGTGCCCTGTTCCGGGGTGCAAGGGTCTGCTGGAGCCCGAGTACTGCCGCTCGGTTCTGCCGGCTCAGGTGTTTGCGAGGTGGGGAAAGGCAATGTGTGATGCAGTGATACAGGGGTCGGAGAAATTCTACTGCCCATATCAGGACTGCTCTGCTCTGCTGATCGATGACGGGGAGGAGGTGGTGAGGGAGTCGCAGTGCCCGCATTGTGGGAGAATGTTTTGTGCTCAGTGCAAGGTTGCTTGGCATGTCGGGATGGATTGCAGCGAGTTTCAGAGGCTGAGTGTGGATGAGAGAGGGAATGAAGATGTTATGTTGAGGAACCTGGCGCAGAGCCAGAACTGGAGGAGGTGTCCCAGCTGCATGTTCTATGTCGAAAAGTCTGTTGGTTGCTCCTACATGAAATGCAGGTGTGGATCTCCAGATTGTCTCGTTGTTTTACTGATGGATTGCCAATGTAAATTGCTGCAGGTGTGGATATGCATTCTGTTACAATTGTGGAGTACAAGCTGTCAGTCATACCTGTCGAAGCTGTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0012505 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044444 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR zf-C3HC4

Protein Analysis

346

Amino Acids

38.66

Weight (kDa)

5.3

Isoelectric Point (pI)

58.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBR	PF01485	197 - 255	1.3e-10	IBR domain, a half RING-finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000271)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14250
fragaria_vesca	FvH4_1g09490 FvH4_1g09500 FvH4_1g09500 FvH4_1g09510 FvH4_3g00870 FvH4_3g03010 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g27960 FvH4_6g35700 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220 FvH4_7g07220
malus_domestica	MD02G1102400.v1.1 MD02G1103700.v1.1 MD03G1111900.v1.1 MD09G1173800.v1.1 MD09G1230900.v1.1 MD09G1231400.v1.1 MD15G1224200.v1.1
prunus_persica	Prupe.3G031900_v2.0.a1 Prupe.3G107200_v2.0.a1 Prupe.7G191200_v2.0.a1 Prupe.7G191800_v2.0.a1 Prupe.8G007700_v2.0.a1
pyrus_communis	pycom02g08010 pycom02g08140 pycom09g14980 pycom09g15030 pycom15g19900
rosa_chinensis	RchiOBHm_Chr2g0096041 RchiOBHm_Chr2g0096051 RchiOBHm_Chr2g0096061 RchiOBHm_Chr2g0096071 RchiOBHm_Chr2g0096081 RchiOBHm_Chr2g0096221 RchiOBHm_Chr2g0131511 RchiOBHm_Chr2g0147691 RchiOBHm_Chr5g0001281 RchiOBHm_Chr5g0001301
rosa_laevigata	RLG00000016619 RLG00000016620 RLG00000016621 RLG00000016622 RLG00000019200 RLG00000020271 RLG00000025410 RLG00000030919 RLG00000031102 RLG00000031117 RLG00000031119 RLG00000031120
rosa_multiflora	Rmu_co8160592.1_g000001 Rmu_sc0001706.1_g000008 Rmu_sc0002494.1_g000005 Rmu_sc0004189.1_g000040 Rmu_sc0005612.1_g000008 Rmu_sc0005612.1_g000011 Rmu_sc0005612.1_g000012 Rmu_sc0006926.1_g000015 Rmu_sc0013257.1_g000002 Rmu_sc0034363.1_g000001 Rmu_sc0034363.1_g000002
rosa_roxburghii	Rroxscaffold_1G00072690 Rroxscaffold_1G00075020 Rroxscaffold_2G00145780 Rroxscaffold_2G00145790 Rroxscaffold_2G00145800 Rroxscaffold_2G00145810 Rroxscaffold_2G00145820 Rroxscaffold_2G00145830 Rroxscaffold_4G00300930 Rroxscaffold_6G00424750
rosa_rugosa	Rorug02G0056000 Rorug02G0056100 Rorug02G0056200 Rorug02G0056300 Rorug02G0056500 Rorug02G0056700 Rorug02G0298000.1 Rorug02G0400900 Rorug02G0401000 Rorug02G0401100 Rorug04G0389500 Rorug04G0389600 Rorug04G0389700 Rorug04G0402300
rosa_samantha	Rh2AG103800 Rh2AG458300 Rh2BG105400 Rh2BG105500 Rh2BG105600 Rh2BG105700 Rh2BG105900 Rh2BG357600 Rh2BG471000 Rh2DG106000 Rh2DG106100 Rh2DG106200 Rh2DG106300 Rh2DG106500 Rh2DG375400 Rh2DG480300 Rh5AG009500 Rh5AG009600 Rh5AG010000 Rh5AG028300 Rh5BG012400 Rh5BG012500 Rh5BG012700 Rh5BG028500
rosa_wichuraiana	Rw2G007950 Rw2G007960 Rw2G007970 Rw2G028490 Rw5G000980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	900, 961
AatII	GACGTC	1 cut(s)	84
Acc36I	ACCTGC	2 cut(s)	900, 961
Acc65I	GGTACC	1 cut(s)	402
AccB1I	GGYRCC	2 cut(s)	402, 504
AccBSI	CCGCTC	1 cut(s)	552
AccI	GTMKAC	1 cut(s)	60
AccII	CGCG	1 cut(s)	122
AciI	CCGC	5 cut(s)	117, 120, 122, 550, 704
AclWI	GGATC	1 cut(s)	925
AcoI	YGGCCR	1 cut(s)	328
AcsI	RAATTY	2 cut(s)	48, 626
AcyI	GRCGYC	1 cut(s)	81
AfaI	GTAC	4 cut(s)	189, 404, 545, 1006
AfiI	CCNNNNNNNGG	6 cut(s)	224, 501, 514, 515, 643, 710
AgsI	TTSAA	3 cut(s)	47, 259, 280
AjnI	CCWGG	2 cut(s)	397, 825
AjuI	GAANNNNNNNTTGG	4 cut(s)	260, 292, 870, 902
AluBI	AGCT	5 cut(s)	108, 478, 861, 1011, 1033
AluI	AGCT	5 cut(s)	108, 478, 861, 1011, 1033
Alw21I	GWGCWC	1 cut(s)	730
Alw26I	GTCTC	2 cut(s)	222, 935
AlwI	GGATC	1 cut(s)	925
AlwNI	CAGNNNCTG	1 cut(s)	781
Ama87I	CYCGRG	1 cut(s)	539
AoxI	GGCC	1 cut(s)	328
ApeKI	GCWGC	3 cut(s)	765, 861, 967
ApoI	RAATTY	2 cut(s)	48, 626
Asp718I	GGTACC	1 cut(s)	402
AspLEI	GCGC	3 cut(s)	77, 386, 832
AspS9I	GGNCC	1 cut(s)	312
AsuC2I	CCSGG	3 cut(s)	310, 327, 516
AsuHPI	GGTGA	2 cut(s)	46, 697
AvaI	CYCGRG	1 cut(s)	539
AvaII	GGWCC	1 cut(s)	312
BaeGI	GKGCMC	2 cut(s)	509, 704
BaeI	ACNNNNGTAYC	4 cut(s)	171, 204, 602, 635
BanI	GGYRCC	2 cut(s)	402, 504
BanII	GRGCYC	1 cut(s)	540
Bbv12I	GWGCWC	1 cut(s)	730
BbvI	GCAGC	3 cut(s)	777, 848, 954
BccI	CCATC	3 cut(s)	160, 751, 940
BciT130I	CCWGG	2 cut(s)	399, 827
BclI	TGATCA	1 cut(s)	456
BcnI	CCSGG	3 cut(s)	310, 327, 516
BcoDI	GTCTC	2 cut(s)	222, 935
BfmI	CTRYAG	1 cut(s)	968
BfoI	RGCGCY	1 cut(s)	78
BfuAI	ACCTGC	2 cut(s)	900, 961
BisI	GCNGC	5 cut(s)	120, 550, 766, 862, 968
BlsI	GCNGC	5 cut(s)	121, 551, 767, 863, 969
BmcAI	AGTACT	1 cut(s)	545
Bme1390I	CCNGG	5 cut(s)	310, 327, 399, 516, 827
Bme18I	GGWCC	1 cut(s)	312
BmeT110I	CYCGRG	1 cut(s)	539
BmgT120I	GGNCC	1 cut(s)	312
BmiI	GGNNCC	6 cut(s)	313, 324, 404, 506, 537, 824
BmrFI	CCNGG	5 cut(s)	310, 327, 399, 516, 827
BmsI	GCATC	1 cut(s)	592
BpmI	CTGGAG	4 cut(s)	24, 554, 865, 906
Bpu10I	CCTNAGC	1 cut(s)	567
BpuMI	CCSGG	3 cut(s)	310, 327, 516
Bsa29I	ATCGAT	2 cut(s)	468, 666
BsaHI	GRCGYC	1 cut(s)	81
BsaJI	CCNNGG	3 cut(s)	120, 398, 515
BsaXI	ACNNNNNCTCC	8 cut(s)	95, 125, 527, 557, 683, 713, 838, 868
Bsc4I	CCNNNNNNNGG	6 cut(s)	224, 501, 514, 515, 643, 710
Bse118I	RCCGGY	2 cut(s)	71, 562
Bse1I	ACTGG	3 cut(s)	41, 331, 848
Bse3DI	GCAATG	1 cut(s)	600
BseBI	CCWGG	2 cut(s)	399, 827
BseCI	ATCGAT	2 cut(s)	468, 666
BseDI	CCNNGG	3 cut(s)	120, 398, 515
BseGI	GGATG	3 cut(s)	305, 762, 796
BseLI	CCNNNNNNNGG	6 cut(s)	224, 501, 514, 515, 643, 710
BseMI	GCAATG	1 cut(s)	600
BseMII	CTCAG	3 cut(s)	581, 743, 773
BseNI	ACTGG	3 cut(s)	41, 331, 848
BseRI	GAGGAG	5 cut(s)	100, 103, 328, 692, 862
BseSI	GKGCMC	2 cut(s)	509, 704
BseXI	GCAGC	3 cut(s)	777, 848, 954
BseYI	CCCAGC	1 cut(s)	857
Bsh1236I	CGCG	1 cut(s)	122
Bsh1285I	CGRYCG	3 cut(s)	126, 142, 420
BshFI	GGCC	1 cut(s)	330
BshNI	GGYRCC	2 cut(s)	402, 504
BshVI	ATCGAT	2 cut(s)	468, 666
BsiEI	CGRYCG	3 cut(s)	126, 142, 420
BsiHKAI	GWGCWC	1 cut(s)	730
BsiHKCI	CYCGRG	1 cut(s)	539
BsiSI	CCGG	5 cut(s)	72, 309, 327, 515, 563
BslFI	GGGAC	1 cut(s)	840
BslI	CCNNNNNNNGG	6 cut(s)	224, 501, 514, 515, 643, 710
BsmAI	GTCTC	2 cut(s)	222, 935
BsmBI	CGTCTC	1 cut(s)	222
BsmFI	GGGAC	1 cut(s)	840
BsmI	GAATGC	1 cut(s)	984
BsnI	GGCC	1 cut(s)	330
BsoBI	CYCGRG	1 cut(s)	539
Bsp1286I	GDGCHC	4 cut(s)	509, 540, 704, 730
Bsp143I	GATC	6 cut(s)	139, 164, 417, 456, 663, 917
BspACI	CCGC	5 cut(s)	117, 120, 122, 550, 704
BspANI	GGCC	1 cut(s)	330
BspCNI	CTCAG	3 cut(s)	580, 742, 774
BspDI	ATCGAT	2 cut(s)	468, 666
BspFNI	CGCG	1 cut(s)	122
BspLI	GGNNCC	6 cut(s)	313, 324, 404, 506, 537, 824
BspMAI	CTGCAG	1 cut(s)	972
BspMI	ACCTGC	2 cut(s)	900, 961
BspPI	GGATC	1 cut(s)	925
BspT107I	GGYRCC	2 cut(s)	402, 504
BsrBI	CCGCTC	1 cut(s)	552
BsrDI	GCAATG	1 cut(s)	600
BsrFI	RCCGGY	2 cut(s)	71, 562
BsrI	ACTGG	3 cut(s)	41, 331, 848
BssAI	RCCGGY	2 cut(s)	71, 562
BssECI	CCNNGG	3 cut(s)	120, 398, 515
BssMI	GATC	6 cut(s)	139, 164, 417, 456, 663, 917
BssNI	GRCGYC	1 cut(s)	81
Bst2UI	CCWGG	2 cut(s)	399, 827
Bst4CI	ACNGT	1 cut(s)	58
BstACI	GRCGYC	1 cut(s)	81
BstC8I	GCNNGC	3 cut(s)	73, 564, 704
BstDEI	CTNAG	3 cut(s)	567, 729, 782
BstDSI	CCRYGG	1 cut(s)	120
BstF5I	GGATG	3 cut(s)	305, 762, 796
BstFNI	CGCG	1 cut(s)	122
BstH2I	RGCGCY	1 cut(s)	78
BstHHI	GCGC	3 cut(s)	77, 386, 832
BstKTI	GATC	6 cut(s)	142, 167, 420, 459, 666, 920
BstMAI	GTCTC	2 cut(s)	222, 935
BstMBI	GATC	6 cut(s)	139, 164, 417, 456, 663, 917
BstMCI	CGRYCG	3 cut(s)	126, 142, 420
BstMWI	GCNNNNNNNGC	3 cut(s)	125, 383, 703
BstNI	CCWGG	2 cut(s)	399, 827
BstNSI	RCATGY	2 cut(s)	752, 868
BstSCI	CCNGG	5 cut(s)	308, 325, 397, 514, 825
BstSFI	CTRYAG	1 cut(s)	968
BstSLI	GKGCMC	2 cut(s)	509, 704
BstUI	CGCG	1 cut(s)	122
BstV1I	GCAGC	3 cut(s)	777, 848, 954
BstX2I	RGATCY	1 cut(s)	917
BstYI	RGATCY	1 cut(s)	917
Bsu15I	ATCGAT	2 cut(s)	468, 666
BsuRI	GGCC	1 cut(s)	330
BsuTUI	ATCGAT	2 cut(s)	468, 666
BtgI	CCRYGG	1 cut(s)	120
BtsCI	GGATG	3 cut(s)	305, 762, 796
BtsI	GCAGTG	2 cut(s)	612, 704
BtsIMutI	CAGTG	3 cut(s)	612, 704, 737
BveI	ACCTGC	2 cut(s)	900, 961
Cac8I	GCNNGC	3 cut(s)	73, 564, 704
CaiI	CAGNNNCTG	1 cut(s)	781
CfoI	GCGC	3 cut(s)	77, 386, 832
Cfr10I	RCCGGY	2 cut(s)	71, 562
Cfr13I	GGNCC	1 cut(s)	312
Cfr42I	CCGCGG	1 cut(s)	123
ClaI	ATCGAT	2 cut(s)	468, 666
Csp6I	GTAC	4 cut(s)	188, 403, 544, 1005
CviAII	CATG	4 cut(s)	434, 749, 865, 901
CviQI	GTAC	4 cut(s)	188, 403, 544, 1005
DdeI	CTNAG	3 cut(s)	567, 729, 782
DpnI	GATC	6 cut(s)	141, 166, 419, 458, 665, 919
DpnII	GATC	6 cut(s)	139, 164, 417, 456, 663, 917
EaeI	YGGCCR	1 cut(s)	328
EciI	GGCGGA	1 cut(s)	106
Eco24I	GRGCYC	1 cut(s)	540
Eco47I	GGWCC	1 cut(s)	312
Eco88I	CYCGRG	1 cut(s)	539
EcoRII	CCWGG	2 cut(s)	397, 825
EcoT22I	ATGCAT	1 cut(s)	986
EcoT38I	GRGCYC	1 cut(s)	540
Esp3I	CGTCTC	1 cut(s)	222
FaeI	CATG	4 cut(s)	437, 752, 868, 904
FaqI	GGGAC	1 cut(s)	840
FatI	CATG	4 cut(s)	433, 748, 864, 900
FauI	CCCGC	1 cut(s)	711
FbaI	TGATCA	1 cut(s)	456
FblI	GTMKAC	1 cut(s)	60
Fnu4HI	GCNGC	5 cut(s)	120, 550, 766, 862, 968
FokI	GGATG	3 cut(s)	292, 769, 803
FriOI	GRGCYC	1 cut(s)	540
Fsp4HI	GCNGC	5 cut(s)	120, 550, 766, 862, 968
GlaI	GCGC	3 cut(s)	76, 385, 831
GluI	GCNGC	5 cut(s)	120, 550, 766, 862, 968
GsaI	CCCAGC	1 cut(s)	861
GsuI	CTGGAG	4 cut(s)	24, 554, 865, 906
HaeII	RGCGCY	1 cut(s)	78
HaeIII	GGCC	1 cut(s)	330
HapII	CCGG	5 cut(s)	72, 309, 327, 515, 563
HhaI	GCGC	3 cut(s)	77, 386, 832
Hin1I	GRCGYC	1 cut(s)	81
Hin1II	CATG	4 cut(s)	437, 752, 868, 904
Hin6I	GCGC	3 cut(s)	75, 384, 830
HinP1I	GCGC	3 cut(s)	75, 384, 830
HincII	GTYRAC	1 cut(s)	61
HindII	GTYRAC	1 cut(s)	61
HinfI	GANTC	8 cut(s)	97, 241, 247, 255, 344, 470, 499, 692
HpaII	CCGG	5 cut(s)	72, 309, 327, 515, 563
HphI	GGTGA	2 cut(s)	46, 697
Hpy166II	GTNNAC	2 cut(s)	61, 303
Hpy188III	TCNNGA	4 cut(s)	421, 644, 754, 923
Hpy8I	GTNNAC	2 cut(s)	61, 303
HpyAV	CCTTC	1 cut(s)	101
HpyCH4III	ACNGT	1 cut(s)	58
HpyCH4IV	ACGT	1 cut(s)	81
HpyCH4V	TGCA	9 cut(s)	429, 522, 605, 735, 765, 864, 909, 970, 984
HpyF10VI	GCNNNNNNNGC	3 cut(s)	125, 383, 703
HpyF3I	CTNAG	3 cut(s)	567, 729, 782
HpySE526I	ACGT	1 cut(s)	81
Hsp92I	GRCGYC	1 cut(s)	81
Hsp92II	CATG	4 cut(s)	437, 752, 868, 904
HspAI	GCGC	3 cut(s)	75, 384, 830
KpnI	GGTACC	1 cut(s)	406
KroI	GCCGGC	2 cut(s)	71, 562
KroNI	GCCGGC	2 cut(s)	73, 564
Ksp22I	TGATCA	1 cut(s)	456
KspI	CCGCGG	1 cut(s)	123
Kzo9I	GATC	6 cut(s)	139, 164, 417, 456, 663, 917
LmnI	GCTCC	5 cut(s)	113, 449, 483, 535, 899
Lsp1109I	GCAGC	3 cut(s)	777, 848, 954
LweI	GCATC	1 cut(s)	592
MaeII	ACGT	1 cut(s)	81
MaeIII	GTNAC	1 cut(s)	990
MalI	GATC	6 cut(s)	141, 166, 419, 458, 665, 919
MbiI	CCGCTC	1 cut(s)	552
MboI	GATC	6 cut(s)	139, 164, 417, 456, 663, 917
MboII	GAAGA	3 cut(s)	79, 300, 818
MfeI	CAATTG	1 cut(s)	995
MflI	RGATCY	1 cut(s)	917
MhlI	GDGCHC	4 cut(s)	509, 540, 704, 730
MluCI	AATT	5 cut(s)	48, 424, 626, 962, 995
MlyI	GAGTC	1 cut(s)	701
MmeI	TCCRAC	2 cut(s)	234, 600
Mph1103I	ATGCAT	1 cut(s)	986
MroNI	GCCGGC	2 cut(s)	71, 562
MslI	CAYNNNNRTG	1 cut(s)	370
MspA1I	CMGCKG	2 cut(s)	122, 861
MspI	CCGG	5 cut(s)	72, 309, 327, 515, 563
MspR9I	CCNGG	5 cut(s)	310, 327, 399, 516, 827
MunI	CAATTG	1 cut(s)	995
Mva1269I	GAATGC	1 cut(s)	984
MvaI	CCWGG	2 cut(s)	399, 827
MvnI	CGCG	1 cut(s)	122
MwoI	GCNNNNNNNGC	3 cut(s)	125, 383, 703
NaeI	GCCGGC	2 cut(s)	73, 564
NciI	CCSGG	3 cut(s)	310, 327, 516
NdeII	GATC	6 cut(s)	139, 164, 417, 456, 663, 917
NgoMIV	GCCGGC	2 cut(s)	71, 562
NlaIII	CATG	4 cut(s)	437, 752, 868, 904
NlaIV	GGNNCC	6 cut(s)	313, 324, 404, 506, 537, 824
NsiI	ATGCAT	1 cut(s)	986
NspI	RCATGY	2 cut(s)	752, 868
PaqCI	CACCTGC	2 cut(s)	900, 961
PcsI	WCGNNNNNNNCGW	6 cut(s)	132, 207, 219, 228, 231, 250
PctI	GAATGC	1 cut(s)	984
PdiI	GCCGGC	2 cut(s)	73, 564
PfeI	GAWTC	7 cut(s)	97, 241, 247, 255, 344, 470, 499
PkrI	GCNGC	5 cut(s)	121, 551, 767, 863, 969
Ple19I	CGATCG	2 cut(s)	142, 420
PleI	GAGTC	1 cut(s)	700
PpsI	GAGTC	1 cut(s)	700
Psp6I	CCWGG	2 cut(s)	397, 825
PspFI	CCCAGC	1 cut(s)	857
PspGI	CCWGG	2 cut(s)	397, 825
PspN4I	GGNNCC	6 cut(s)	313, 324, 404, 506, 537, 824
PspPI	GGNCC	1 cut(s)	312
PstI	CTGCAG	1 cut(s)	972
PstNI	CAGNNNCTG	1 cut(s)	781
PsuI	RGATCY	1 cut(s)	917
PvuI	CGATCG	2 cut(s)	142, 420
PvuII	CAGCTG	1 cut(s)	861
RsaI	GTAC	4 cut(s)	189, 404, 545, 1006
RsaNI	GTAC	4 cut(s)	188, 403, 544, 1005
RseI	CAYNNNNRTG	1 cut(s)	370
SacII	CCGCGG	1 cut(s)	123
SalI	GTCGAC	1 cut(s)	59
SatI	GCNGC	5 cut(s)	120, 550, 766, 862, 968
Sau3AI	GATC	6 cut(s)	139, 164, 417, 456, 663, 917
Sau96I	GGNCC	1 cut(s)	312
ScaI	AGTACT	1 cut(s)	545
SchI	GAGTC	1 cut(s)	701
ScrFI	CCNGG	5 cut(s)	310, 327, 399, 516, 827
SduI	GDGCHC	4 cut(s)	509, 540, 704, 730
SfaNI	GCATC	1 cut(s)	592
SfcI	CTRYAG	1 cut(s)	968
Sfr303I	CCGCGG	1 cut(s)	123
SgrBI	CCGCGG	1 cut(s)	123
SgrDI	CGTCGACG	1 cut(s)	59
SinI	GGWCC	1 cut(s)	312
SmiMI	CAYNNNNRTG	1 cut(s)	370
Sse9I	AATT	5 cut(s)	48, 424, 626, 962, 995
SsiI	CCGC	5 cut(s)	117, 120, 122, 550, 704
StyD4I	CCNGG	5 cut(s)	308, 325, 397, 514, 825
TaaI	ACNGT	1 cut(s)	58
TaiI	ACGT	1 cut(s)	84
TaqI	TCGA	8 cut(s)	60, 142, 201, 420, 468, 666, 876, 1028
TasI	AATT	5 cut(s)	48, 424, 626, 962, 995
TatI	WGTACW	2 cut(s)	543, 1004
TauI	GCSGC	2 cut(s)	122, 552
TfiI	GAWTC	7 cut(s)	97, 241, 247, 255, 344, 470, 499
TscAI	CASTG	3 cut(s)	612, 704, 737
TseI	GCWGC	3 cut(s)	765, 861, 967
TspDTI	ATGAA	2 cut(s)	819, 917
TspGWI	ACGGA	3 cut(s)	240, 304, 368
TspRI	CASTG	3 cut(s)	612, 704, 737
VpaK11BI	GGWCC	1 cut(s)	312
XapI	RAATTY	2 cut(s)	48, 626
XceI	RCATGY	2 cut(s)	752, 868
XmiI	GTMKAC	1 cut(s)	60
ZraI	GACGTC	1 cut(s)	82
ZrmI	AGTACT	1 cut(s)	545
Zsp2I	ATGCAT	1 cut(s)	986

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.