RchiOBHm_Chr5g0075811

Mediator of RNA polymerase II transcription subunit 15a-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000315
Physical Location & Seq
Forward (+)
81548649 .. 81552223
3575 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35051

Sequence Viewer

Length: 1581 bp
ATGGATAACAACAATGGCATTCCTCCTCAAGATGGACAGCCCTCAATGGAAGCAGGAGATTGGAGGAGCAGAATGCCCACGGATATGCGGCAAAGACTTATCAATAAGATAATGTCTACATTGAAGGCGCATCGCCCCATTTCTGGTCAAGAGGGATTAGATGAACTCGAGGAAAATGCTGTAAGTTTGGAGGAAAAGATTTATGCTGCTGCCACTAGCCAGTTGGACTATCTCTGGAAAATTATGCTCACAGTTGTGACCAAGCCACAGAATACAACATCCAATCCTCTAGAATCCAATGGCAAGGGACCTCTCGATTCAGTTGCTGATCAAGGACAATCAGTCTCAATGTCATTGCCAGCCAATCAGTCCCAAACAAGGCAACATTTCGTACCACAGAACATACAGAATAACATTCTGCCTGCCAGAGTTCAAAGTTATGCTGGGTTGTCATCTGGACTTTCTCCTACCATAAACTATCAAACAAGGGAACAATTTGTACCGCAAAATATTCAGAATAGCATTCTGACTGCTGGAGTTCAAAGTTCTGTTGGCTTATCATCTGCACTATCTCCTACCGGAAACTATCATCTGTATGGCCTCCAACCCCCTGCCCCTGGTCAAAATATTCCCGGCTTATCATATGCACTGCCTCCTCCACAGGGTCTGAATAAGTCTGCACTACTTGCCTCTATTCCGTCTGGCTTTTCTTCTGCTCCAGCATCTATTATGCGACCTTCCACACTGCAGTCATCTCTCCCTAGGCTTCAGCAGAATCAACAATCAACTATTCCCCACTCTTCACAATCCATGCTTCAGCAAACAGCAGTGCCACAACAGCAAATGTTGCCCCAACAGCATCAACAGCAACAGTTAACAGGGTCTTCAACAGATCAGCAGAACAAGAAGAATCCATCGCAGTCGATTGCAGAGCTGTTAACCACAATAAAGAACTCACAGCAGCAGGTCCCTATGGGCTCTATTCAACAGACTCCGGTCAGTGCTCCCCAGCAAGCTAACATGAATGTACAGAGTGGGATTAACACATTGCACCCAAACGTTATTCCACTCAGTATTCTTCAGAACCAACAACAATATCAGAATCAACTTCAGCGACAATATCAAATCCAGCTACTACATCAACAGAGTCAACAGCTGCAGTTGATGCAGATGCAGCAGATAAATCAACAACTGCAACAGCAGCTGGCTAGACAGTCGCAGACACACCAAATGCCACAGCTCCACCAAATCAGAGTTGTTGACGCAAACATGAATGCCTCGTCATCACAGAGTGGGAGTAATATGCTGCAGGCAAACATTGTTTCTCCTCTGCCAAACTCTGGTATTGTTGATAACCAGCATCTGAAGCAAGAACAGGAGCAGAAAATGTTTAAGCATCAACCCCAGCAACCATATCAACAGCTACAGATCCAGATGCCGCAGATGCTTCAAGAAAAGCAACAGCAAAAGATACAGCAACTAGAGCAACAAGCAAAGCATCAGCTGTGTCATATTTATTTCATTTATCTCATCTTTCTCACCATTCTGATGGGTGCTCTCATCTTCGGGATAGGCCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KIX_2

Protein Analysis

526

Amino Acids

58.56

Weight (kDa)

8.99

Isoelectric Point (pI)

76.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIX_2 PF16987 19 - 94 7.7e-19 KIX domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000315)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15790 AT1G15790 AT1G15790 AT1G15790 AT1G15790
fragaria_vesca FvH4_3g12350 FvH4_3g37483 FvH4_3g42320 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42361
malus_domestica MD03G1031600.v1.1 MD03G1031700.v1.1 MD03G1033500.v1.1 MD07G1261500.v1.1 MD11G1035800.v1.1
prunus_persica Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1
pyrus_communis pycom03g02570 pycom03g02580
rosa_chinensis RchiOBHm_Chr4g0419101 RchiOBHm_Chr5g0075711 RchiOBHm_Chr5g0075731 RchiOBHm_Chr5g0075781 RchiOBHm_Chr5g0075801 RchiOBHm_Chr5g0075811 RchiOBHm_Chr5g0075831 RchiOBHm_Chr5g0075841 RchiOBHm_Chr5g0075851 RchiOBHm_Chr5g0075861
rosa_laevigata RLG00000029834 RLG00000036588 RLG00000036591 RLG00000036592 RLG00000036594 RLG00000036595 RLG00000036597 RLG00000036647
rosa_multiflora Rmu_co8127406.1_g000001 Rmu_co8138284.1_g000001 Rmu_sc0002101.1_g000001 Rmu_sc0002101.1_g000006 Rmu_sc0002652.1_g000027 Rmu_sc0002652.1_g000029 Rmu_sc0008562.1_g000002 Rmu_sc0019599.1_g000001 Rmu_sc0019861.1_g000005 Rmu_sc0029317.1_g000001 Rmu_sc0031378.1_g000001 Rmu_ssc0000402.1_g000001
rosa_roxburghii Rroxscaffold_1G00005820 Rroxscaffold_1G00005830 Rroxscaffold_1G00005840 Rroxscaffold_1G00005850 Rroxscaffold_1G00005860 Rroxscaffold_1G00005870 Rroxscaffold_1G00005890 Rroxscaffold_5G00340930 Rroxscaffold_5G00343250 Rroxscaffold_5G00369260
rosa_rugosa Rorug05G0442200 Rorug05G0442300.1 Rorug05G0442400 Rorug05G0442500 Rorug05G0442600 Rorug05G0442700 Rorug05G0442900
rosa_samantha Rh1AG189900 Rh2DG257500 Rh5AG498900 Rh5AG499100 Rh5AG499400 Rh5AG499500 Rh5AG499600 Rh5AG499700 Rh5AG499900 Rh5AG506800 Rh5BG519900 Rh5BG520100 Rh5BG520400 Rh5BG520500 Rh5BG520600 Rh5BG520800 Rh5BG520900 Rh5BG521100 Rh5CG543900 Rh5CG544100 Rh5CG544400 Rh5CG544500 Rh5CG544600 Rh5CG544800 Rh5CG544900 Rh5CG545000 Rh5CG545200 Rh5DG532700 Rh5DG533100 Rh5DG533200 Rh5DG533400 Rh5DG533500 Rh5DG533600 Rh5DG533700
rosa_wichuraiana Rw5G046310 Rw5G046340 Rw5G046350 Rw5G046360 Rw5G046370 Rw5G046380 Rw5G046400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 955
AccB7I CCANNNNNTGG 1 cut(s) 1340
AccI GTMKAC 1 cut(s) 116
AciI CCGC 3 cut(s) 88, 503, 1439
AclI AACGTT 1 cut(s) 1059
AclWI GGATC 1 cut(s) 1423
AcuI CTGAAG 5 cut(s) 752, 800, 1064, 1094, 1385
AdeI CACNNNGTG 1 cut(s) 1292
AfaI GTAC 3 cut(s) 393, 501, 1029
AfiI CCNNNNNNNGG 6 cut(s) 32, 143, 378, 617, 662, 1340
AgsI TTSAA 6 cut(s) 124, 434, 542, 888, 986, 1451
AhdI GACNNNNNGTC 1 cut(s) 341
AjnI CCWGG 1 cut(s) 616
AleI CACNNNNGTG 1 cut(s) 254
AluBI AGCT 8 cut(s) 934, 1016, 1132, 1156, 1204, 1240, 1423, 1504
AluI AGCT 8 cut(s) 934, 1016, 1132, 1156, 1204, 1240, 1423, 1504
Alw21I GWGCWC 2 cut(s) 1006, 1558
Alw26I GTCTC 1 cut(s) 349
AlwI GGATC 1 cut(s) 1423
AlwNI CAGNNNCTG 4 cut(s) 326, 667, 1204, 1363
Ama87I CYCGRG 1 cut(s) 167
AoxI GGCC 2 cut(s) 598, 1573
ApeKI GCWGC 7 cut(s) 206, 209, 961, 1156, 1174, 1201, 1306
AspA2I CCTAGG 1 cut(s) 761
AspLEI GCGC 1 cut(s) 130
AspS9I GGNCC 2 cut(s) 308, 967
AsuC2I CCSGG 1 cut(s) 633
AsuHPI GGTGA 1 cut(s) 1531
AvaI CYCGRG 1 cut(s) 167
AvaII GGWCC 2 cut(s) 308, 967
AvrII CCTAGG 1 cut(s) 761
BanII GRGCYC 1 cut(s) 980
BbsI GAAGAC 1 cut(s) 876
Bbv12I GWGCWC 2 cut(s) 1006, 1558
BbvI GCAGC 7 cut(s) 193, 196, 973, 1143, 1186, 1213, 1293
BccI CCATC 3 cut(s) 26, 922, 1543
BcgI CGANNNNNNTGC 4 cut(s) 158, 192, 305, 339
BciT130I CCWGG 1 cut(s) 618
BclI TGATCA 1 cut(s) 328
BcnI CCSGG 1 cut(s) 633
BcoDI GTCTC 1 cut(s) 349
BfaI CTAG 5 cut(s) 216, 290, 762, 1209, 1481
BfmI CTRYAG 4 cut(s) 746, 1157, 1307, 1424
BfuAI ACCTGC 1 cut(s) 955
BisI GCNGC 9 cut(s) 89, 207, 210, 962, 1157, 1175, 1202, 1307, 1439
BlnI CCTAGG 1 cut(s) 761
BlsI GCNGC 9 cut(s) 90, 208, 211, 963, 1158, 1176, 1203, 1308, 1440
Bme1390I CCNGG 2 cut(s) 618, 633
Bme18I GGWCC 2 cut(s) 308, 967
BmeRI GACNNNNNGTC 1 cut(s) 341
BmeT110I CYCGRG 1 cut(s) 167
BmgT120I GGNCC 2 cut(s) 308, 967
BmiI GGNNCC 2 cut(s) 309, 969
BmrFI CCNGG 2 cut(s) 618, 633
BoxI GACNNNNGTC 1 cut(s) 995
BpiI GAAGAC 1 cut(s) 876
BpmI CTGGAG 2 cut(s) 555, 702
BpuEI CTTGAG 1 cut(s) 12
BpuMI CCSGG 1 cut(s) 633
BsaJI CCNNGG 3 cut(s) 78, 616, 761
BsaWI WCCGGW 2 cut(s) 578, 994
Bsc4I CCNNNNNNNGG 6 cut(s) 32, 143, 378, 617, 662, 1340
Bse1I ACTGG 1 cut(s) 220
Bse3DI GCAATG 2 cut(s) 353, 1046
BseBI CCWGG 1 cut(s) 618
BseDI CCNNGG 3 cut(s) 78, 616, 761
BseGI GGATG 1 cut(s) 278
BseLI CCNNNNNNNGG 6 cut(s) 32, 143, 378, 617, 662, 1340
BseMI GCAATG 2 cut(s) 353, 1046
BseMII CTCAG 1 cut(s) 1084
BseNI ACTGG 1 cut(s) 220
BseRI GAGGAG 4 cut(s) 15, 79, 645, 1317
BseXI GCAGC 7 cut(s) 193, 196, 973, 1143, 1186, 1213, 1293
BseYI CCCAGC 3 cut(s) 443, 1008, 1404
BsgI GTGCAG 2 cut(s) 549, 663
BshFI GGCC 2 cut(s) 600, 1575
BsiHKAI GWGCWC 2 cut(s) 1006, 1558
BsiHKCI CYCGRG 1 cut(s) 167
BsiSI CCGG 3 cut(s) 579, 633, 995
BslFI GGGAC 3 cut(s) 321, 355, 953
BslI CCNNNNNNNGG 6 cut(s) 32, 143, 378, 617, 662, 1340
BsmAI GTCTC 1 cut(s) 349
BsmFI GGGAC 3 cut(s) 321, 355, 953
BsmI GAATGC 4 cut(s) 18, 78, 522, 1279
BsnI GGCC 2 cut(s) 600, 1575
BsoBI CYCGRG 1 cut(s) 167
Bsp1286I GDGCHC 3 cut(s) 980, 1006, 1558
Bsp1407I TGTACA 1 cut(s) 1027
Bsp143I GATC 3 cut(s) 328, 892, 1428
BspACI CCGC 3 cut(s) 88, 503, 1439
BspANI GGCC 2 cut(s) 600, 1575
BspCNI CTCAG 1 cut(s) 1083
BspLI GGNNCC 2 cut(s) 309, 969
BspMAI CTGCAG 3 cut(s) 750, 1161, 1311
BspMI ACCTGC 1 cut(s) 955
BspPI GGATC 1 cut(s) 1423
BsrDI GCAATG 2 cut(s) 353, 1046
BsrGI TGTACA 1 cut(s) 1027
BsrI ACTGG 1 cut(s) 220
BssECI CCNNGG 3 cut(s) 78, 616, 761
BssMI GATC 3 cut(s) 328, 892, 1428
BssT1I CCWWGG 1 cut(s) 761
Bst2UI CCWGG 1 cut(s) 618
Bst4CI ACNGT 3 cut(s) 253, 873, 1215
Bst6I CTCTTC 1 cut(s) 805
BstAPI GCANNNNNTGC 3 cut(s) 686, 847, 1165
BstAUI TGTACA 1 cut(s) 1027
BstC8I GCNNGC 5 cut(s) 360, 423, 1014, 1206, 1311
BstDEI CTNAG 1 cut(s) 1070
BstDSI CCRYGG 1 cut(s) 78
BstF5I GGATG 1 cut(s) 278
BstHHI GCGC 1 cut(s) 130
BstKTI GATC 3 cut(s) 331, 895, 1431
BstMAI GTCTC 1 cut(s) 349
BstMBI GATC 3 cut(s) 328, 892, 1428
BstNI CCWGG 1 cut(s) 618
BstPAI GACNNNNGTC 1 cut(s) 995
BstSCI CCNGG 2 cut(s) 616, 631
BstSFI CTRYAG 4 cut(s) 746, 1157, 1307, 1424
BstV1I GCAGC 7 cut(s) 193, 196, 973, 1143, 1186, 1213, 1293
BstV2I GAAGAC 1 cut(s) 876
BstX2I RGATCY 1 cut(s) 1428
BstXI CCANNNNNNTGG 1 cut(s) 1549
BstYI RGATCY 1 cut(s) 1428
BsuRI GGCC 2 cut(s) 600, 1575
BtgI CCRYGG 1 cut(s) 78
BtgZI GCGATG 2 cut(s) 116, 900
BtsCI GGATG 1 cut(s) 278
BtsI GCAGTG 3 cut(s) 647, 743, 834
BtsIMutI CAGTG 4 cut(s) 647, 743, 834, 1006
BveI ACCTGC 1 cut(s) 955
Cac8I GCNNGC 5 cut(s) 360, 423, 1014, 1206, 1311
CaiI CAGNNNCTG 4 cut(s) 326, 667, 1204, 1363
CfoI GCGC 1 cut(s) 130
Cfr13I GGNCC 2 cut(s) 308, 967
CseI GACGC 1 cut(s) 1271
Csp6I GTAC 3 cut(s) 392, 500, 1028
CviAII CATG 3 cut(s) 811, 1021, 1270
CviQI GTAC 3 cut(s) 392, 500, 1028
DdeI CTNAG 1 cut(s) 1070
DpnI GATC 3 cut(s) 330, 894, 1430
DpnII GATC 3 cut(s) 328, 892, 1428
DraIII CACNNNGTG 1 cut(s) 1292
DriI GACNNNNNGTC 1 cut(s) 341
Eam1104I CTCTTC 1 cut(s) 805
Eam1105I GACNNNNNGTC 1 cut(s) 341
EarI CTCTTC 1 cut(s) 805
Eco130I CCWWGG 1 cut(s) 761
Eco24I GRGCYC 1 cut(s) 980
Eco47I GGWCC 2 cut(s) 308, 967
Eco57I CTGAAG 5 cut(s) 752, 800, 1064, 1094, 1385
Eco88I CYCGRG 1 cut(s) 167
EcoO109I RGGNCCY 2 cut(s) 308, 967
EcoRII CCWGG 1 cut(s) 616
EcoT14I CCWWGG 1 cut(s) 761
EcoT38I GRGCYC 1 cut(s) 980
ErhI CCWWGG 1 cut(s) 761
FaeI CATG 3 cut(s) 814, 1024, 1273
FaqI GGGAC 3 cut(s) 321, 355, 953
FatI CATG 3 cut(s) 810, 1020, 1269
FauNDI CATATG 1 cut(s) 643
FbaI TGATCA 1 cut(s) 328
FblI GTMKAC 1 cut(s) 116
Fnu4HI GCNGC 9 cut(s) 89, 207, 210, 962, 1157, 1175, 1202, 1307, 1439
FokI GGATG 1 cut(s) 265
FriOI GRGCYC 1 cut(s) 980
Fsp4HI GCNGC 9 cut(s) 89, 207, 210, 962, 1157, 1175, 1202, 1307, 1439
FspBI CTAG 5 cut(s) 216, 290, 762, 1209, 1481
GlaI GCGC 1 cut(s) 129
GluI GCNGC 9 cut(s) 89, 207, 210, 962, 1157, 1175, 1202, 1307, 1439
GsaI CCCAGC 3 cut(s) 447, 1012, 1408
GsuI CTGGAG 2 cut(s) 555, 702
HaeIII GGCC 2 cut(s) 600, 1575
HapII CCGG 3 cut(s) 579, 633, 995
HgaI GACGC 1 cut(s) 1271
HhaI GCGC 1 cut(s) 130
Hin1II CATG 3 cut(s) 814, 1024, 1273
Hin6I GCGC 1 cut(s) 128
HinP1I GCGC 1 cut(s) 128
HincII GTYRAC 4 cut(s) 876, 939, 1151, 1261
HindII GTYRAC 4 cut(s) 876, 939, 1151, 1261
HinfI GANTC 7 cut(s) 293, 317, 775, 910, 991, 1102, 1147
HpaI GTTAAC 2 cut(s) 876, 939
HpaII CCGG 3 cut(s) 579, 633, 995
HphI GGTGA 1 cut(s) 1531
Hpy166II GTNNAC 5 cut(s) 117, 876, 939, 1151, 1261
Hpy188I TCNGA 8 cut(s) 516, 528, 669, 1083, 1101, 1253, 1365, 1548
Hpy188III TCNNGA 9 cut(s) 29, 149, 235, 290, 314, 456, 1432, 1451, 1567
Hpy8I GTNNAC 5 cut(s) 117, 876, 939, 1151, 1261
HpyAV CCTTC 2 cut(s) 118, 747
HpyCH4III ACNGT 3 cut(s) 253, 873, 1215
HpyCH4IV ACGT 1 cut(s) 1059
HpyF3I CTNAG 1 cut(s) 1070
HpySE526I ACGT 1 cut(s) 1059
Hsp92II CATG 3 cut(s) 814, 1024, 1273
HspAI GCGC 1 cut(s) 128
Ksp22I TGATCA 1 cut(s) 328
KspAI GTTAAC 2 cut(s) 876, 939
Kzo9I GATC 3 cut(s) 328, 892, 1428
LmnI GCTCC 5 cut(s) 66, 721, 1009, 1245, 1378
Lsp1109I GCAGC 7 cut(s) 193, 196, 973, 1143, 1186, 1213, 1293
MaeI CTAG 5 cut(s) 216, 290, 762, 1209, 1481
MaeII ACGT 1 cut(s) 1059
MaeIII GTNAC 1 cut(s) 256
MalI GATC 3 cut(s) 330, 894, 1430
MboI GATC 3 cut(s) 328, 892, 1428
MboII GAAGA 6 cut(s) 702, 792, 876, 919, 1070, 1555
MflI RGATCY 1 cut(s) 1428
MhlI GDGCHC 3 cut(s) 980, 1006, 1558
MluCI AATT 2 cut(s) 240, 494
MlyI GAGTC 2 cut(s) 985, 1156
MmeI TCCRAC 2 cut(s) 204, 628
MseI TTAA 4 cut(s) 875, 938, 1041, 1392
MslI CAYNNNNRTG 4 cut(s) 83, 254, 594, 1547
MspA1I CMGCKG 3 cut(s) 1156, 1204, 1504
MspI CCGG 3 cut(s) 579, 633, 995
MspR9I CCNGG 2 cut(s) 618, 633
Mva1269I GAATGC 4 cut(s) 18, 78, 522, 1279
MvaI CCWGG 1 cut(s) 618
NciI CCSGG 1 cut(s) 633
NdeI CATATG 1 cut(s) 643
NdeII GATC 3 cut(s) 328, 892, 1428
NlaIII CATG 3 cut(s) 814, 1024, 1273
NlaIV GGNNCC 2 cut(s) 309, 969
NmuCI GTSAC 1 cut(s) 256
OliI CACNNNNGTG 1 cut(s) 254
PaeR7I CTCGAG 1 cut(s) 167
PctI GAATGC 4 cut(s) 18, 78, 522, 1279
PfeI GAWTC 5 cut(s) 293, 317, 775, 910, 1102
PflMI CCANNNNNTGG 1 cut(s) 1340
PkrI GCNGC 9 cut(s) 90, 208, 211, 963, 1158, 1176, 1203, 1308, 1440
PleI GAGTC 2 cut(s) 985, 1155
PpsI GAGTC 2 cut(s) 985, 1155
PpuMI RGGWCCY 2 cut(s) 308, 967
PshAI GACNNNNGTC 1 cut(s) 995
Psp1406I AACGTT 1 cut(s) 1059
Psp5II RGGWCCY 2 cut(s) 308, 967
Psp6I CCWGG 1 cut(s) 616
PspFI CCCAGC 3 cut(s) 443, 1008, 1404
PspGI CCWGG 1 cut(s) 616
PspN4I GGNNCC 2 cut(s) 309, 969
PspPI GGNCC 2 cut(s) 308, 967
PspPPI RGGWCCY 2 cut(s) 308, 967
PspXI VCTCGAGB 1 cut(s) 167
PsrI GAACNNNNNNTAC 2 cut(s) 483, 515
PstI CTGCAG 3 cut(s) 750, 1161, 1311
PstNI CAGNNNCTG 4 cut(s) 326, 667, 1204, 1363
PsuI RGATCY 1 cut(s) 1428
PvuII CAGCTG 3 cut(s) 1156, 1204, 1504
RsaI GTAC 3 cut(s) 393, 501, 1029
RsaNI GTAC 3 cut(s) 392, 500, 1028
RseI CAYNNNNRTG 4 cut(s) 83, 254, 594, 1547
SaqAI TTAA 4 cut(s) 875, 938, 1041, 1392
SatI GCNGC 9 cut(s) 89, 207, 210, 962, 1157, 1175, 1202, 1307, 1439
Sau3AI GATC 3 cut(s) 328, 892, 1428
Sau96I GGNCC 2 cut(s) 308, 967
SchI GAGTC 2 cut(s) 985, 1156
ScrFI CCNGG 2 cut(s) 618, 633
SduI GDGCHC 3 cut(s) 980, 1006, 1558
SfcI CTRYAG 4 cut(s) 746, 1157, 1307, 1424
Sfr274I CTCGAG 1 cut(s) 167
SinI GGWCC 2 cut(s) 308, 967
SlaI CTCGAG 1 cut(s) 167
SmiMI CAYNNNNRTG 4 cut(s) 83, 254, 594, 1547
SmlI CTYRAG 2 cut(s) 27, 167
SmoI CTYRAG 2 cut(s) 27, 167
Sse9I AATT 2 cut(s) 240, 494
SsiI CCGC 3 cut(s) 88, 503, 1439
SspI AATATT 2 cut(s) 511, 628
SspMI CTAG 5 cut(s) 216, 290, 762, 1209, 1481
StyD4I CCNGG 2 cut(s) 616, 631
StyI CCWWGG 1 cut(s) 761
TaaI ACNGT 3 cut(s) 253, 873, 1215
TaiI ACGT 1 cut(s) 1062
TaqI TCGA 3 cut(s) 168, 315, 923
TasI AATT 2 cut(s) 240, 494
TatI WGTACW 1 cut(s) 1027
TauI GCSGC 2 cut(s) 91, 1441
TfiI GAWTC 5 cut(s) 293, 317, 775, 910, 1102
Tru1I TTAA 4 cut(s) 875, 938, 1041, 1392
Tru9I TTAA 4 cut(s) 875, 938, 1041, 1392
TscAI CASTG 4 cut(s) 654, 750, 834, 1006
TseFI GTSAC 1 cut(s) 256
TseI GCWGC 7 cut(s) 206, 209, 961, 1156, 1174, 1201, 1306
Tsp45I GTSAC 1 cut(s) 256
TspDTI ATGAA 4 cut(s) 177, 1037, 1286, 1510
TspGWI ACGGA 2 cut(s) 95, 687
TspRI CASTG 4 cut(s) 654, 750, 834, 1006
Van91I CCANNNNNTGG 1 cut(s) 1340
VpaK11BI GGWCC 2 cut(s) 308, 967
XbaI TCTAGA 1 cut(s) 289
XcmI CCANNNNNNNNNTGG 1 cut(s) 220
XhoI CTCGAG 1 cut(s) 167
XmaJI CCTAGG 1 cut(s) 761
XmiI GTMKAC 1 cut(s) 116
XspI CTAG 5 cut(s) 216, 290, 762, 1209, 1481
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.