Rorug05G0442400

KIX domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000315
Physical Location & Seq
Reverse (-)
61448035 .. 61451636
3602 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0442400.1

Sequence Viewer

Length: 2178 bp
ATGGGCTTCTTCGACCTGAGCGTACCCTACACCGACCTCCCGCCGCCGGACCGCTCAACCCGCGCAAAGCTCGTGACCAAGGCCCTCGAGCTCGGCTACTCCGGCGTCGCCTACAACCGTACGATCAAGGGCGTCATGTCCGATCGCGACCGTTGCTCCATCCCCCTCCTCACTCTCCCTTCTCTCCTCAAACACTCTCCTCACCTCACCTCCTCCGTCGGCTTCCACCGCGACCTCCTCGGCGTCCCACGCGCCACCCCTTTCCGCCAGTACACGCGCCTCACCGTCTGCGCCGAAACCCCTGCCCAGGCTCAGGCCCTCAATTCCGGCAACCCCATTTTGAAGACCTACGATTTGGTGGCTGTCAAGCCCATGAACCAGTCCGCTTTCGATCAGGCCTGTGAGAAATTGGAGGTAGATATAATCGCGATTGATTTTTCGGAGAAGTTACCATTTCGATTGAAGCAGCCTCTGGTTAAAGCTGCCATTGAGCGGAAGGTGTATTTTGAGATCACATATGCAGGGCTTATTGCCGATGTTCAAACTAGAAGGCAAATTATAACCAATGCTAAGTTATTGGTAGATTGGACTCGAGGAAGGAATATAATTCTCTCTAGTGCTGCCCCAACTGCGAATGAATTTAGAGGGCCATATGATGTTGCAAACTTAATGTCATTGCTCGGTCTCTCCATGGAACGAGCTAAGGCGGCTATTTCAAGAAATTGTAGGACTCTTATATCTAATGCAGTGAGAAAAAAACACTATTATAAGGAAGCCATTAGAGTTGAAGAACTACCATCAGGTCAAGAAAGTGATGGGAACAAACCTTCGTCTAGTGACTCTTTTAATTGGGATCCCATCTCTAGTGGTGAGGGTGATTTGCTTTTAGATGATTTGGCAAAGGCTTTCAGTAACTCCAGTACTAAAGCAACCAAAATGGTCAAAGCCATTGATTTTGCTTCGGTTATTGACAGCATGCCATCACTTGGATTTCAAGTTAACGATCTTATATCTGGAACTAATGTGGTTGTGTCACAACCATTGGCTACTCAGAAAAACATCGTTTCTGCTCCCCAGTTAAATGTGCAATCAGTTGCAACTGATGGAGTACAAGAACAATCTGTTTTATGTGATACTATGTTGGAGCGGCAAAGGTTCAAAAGCGAAAATCCTCAGAAATTATATTCATCTAGTGATACTACCAAAGCTGTTAACAATGTTATTCCAATTGAAGATCCTTCGATAACCACTAGTGCAGAACCAAATAGTCCAGATGAAACAGATGGGATTGCCACAGATATTCATGATGTGCAATCACAGAAGTCTGTGATTGCAAATGCTGTTAATGATGTTATGGAAATTGAAGTTCCTACAACTACTGGAGCAGAACCAATGAATTCAGCTGAATCAATGGGGATTACAAAAGAAATTCATGATGTGCAATCACTGAAGTCTGTGACTGCCAAAACTTTTAAAGATGCTATGGAAATTGAAGCTCCTACGACCACTGGAGCGGAAACAAAGAATCCGGATGGAATAGATGGGGTTACTACAGAAATTCTTAATGTTCTATCACAGAAGAGTATGACTAATTGCGAATTGAATGTTGTGCCATCTCAGGTTAATTTAACATATCATGCACTAGACATTGGGTTGAGTGTTGCTTGTAATCCTGATTCTGAAGTTCAAGTTCCCACTAATTATCAGGACAGTGATATTCCCGGTCCTCATAATGAAGAGGCTGATAGTATTAAAAATAATGATATACAAAGTGATTTAGTGGATGAAGTTCTGACAGGTAAAGAAAAAAAATCTTTGCCTCTGGATTCAGCATTGTATAAAAGTATTTCGGAAGTGGATGAATTGACGGAACCTGGAGATGATGTAGTTGTACTTGCAAATCAGGTTCCTGTTCTGGATTCTAGTGATGAGATGACAGCAACTGATGATTATTCAGTTGCAAATCATGAGACAGCAGAGGTAATAATGGATGAGCAAGAACATGGGAAAGCTGATGTTGAATTGAGCTATCCAGCCTTGGTTCAGTCTGAATCAGGGAAATCCAAGGCAAAAAGGAAGAAACCTCATCAGGTGACATTTCTTCCTCTCAAGCGATTGCTGCATGCTACACCTTTTAAGAAGGCTCGGAAAAGTAAAAGGAGACATAAGATGGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KIX_2

Protein Analysis

725

Amino Acids

79.25

Weight (kDa)

5.22

Isoelectric Point (pI)

44.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RNase_P_p30 PF01876 5 - 241 6.7e-52 RNase P subunit p30
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000315)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15790 AT1G15790 AT1G15790 AT1G15790 AT1G15790
fragaria_vesca FvH4_3g12350 FvH4_3g37483 FvH4_3g42320 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42361
malus_domestica MD03G1031600.v1.1 MD03G1031700.v1.1 MD03G1033500.v1.1 MD07G1261500.v1.1 MD11G1035800.v1.1
prunus_persica Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1
pyrus_communis pycom03g02570 pycom03g02580
rosa_chinensis RchiOBHm_Chr4g0419101 RchiOBHm_Chr5g0075711 RchiOBHm_Chr5g0075731 RchiOBHm_Chr5g0075781 RchiOBHm_Chr5g0075801 RchiOBHm_Chr5g0075811 RchiOBHm_Chr5g0075831 RchiOBHm_Chr5g0075841 RchiOBHm_Chr5g0075851 RchiOBHm_Chr5g0075861
rosa_laevigata RLG00000029834 RLG00000036588 RLG00000036591 RLG00000036592 RLG00000036594 RLG00000036595 RLG00000036597 RLG00000036647
rosa_multiflora Rmu_co8127406.1_g000001 Rmu_co8138284.1_g000001 Rmu_sc0002101.1_g000001 Rmu_sc0002101.1_g000006 Rmu_sc0002652.1_g000027 Rmu_sc0002652.1_g000029 Rmu_sc0008562.1_g000002 Rmu_sc0019599.1_g000001 Rmu_sc0019861.1_g000005 Rmu_sc0029317.1_g000001 Rmu_sc0031378.1_g000001 Rmu_ssc0000402.1_g000001
rosa_roxburghii Rroxscaffold_1G00005820 Rroxscaffold_1G00005830 Rroxscaffold_1G00005840 Rroxscaffold_1G00005850 Rroxscaffold_1G00005860 Rroxscaffold_1G00005870 Rroxscaffold_1G00005890 Rroxscaffold_5G00340930 Rroxscaffold_5G00343250 Rroxscaffold_5G00369260
rosa_rugosa Rorug05G0442200 Rorug05G0442300.1 Rorug05G0442400 Rorug05G0442500 Rorug05G0442600 Rorug05G0442700 Rorug05G0442900
rosa_samantha Rh1AG189900 Rh2DG257500 Rh5AG498900 Rh5AG499100 Rh5AG499400 Rh5AG499500 Rh5AG499600 Rh5AG499700 Rh5AG499900 Rh5AG506800 Rh5BG519900 Rh5BG520100 Rh5BG520400 Rh5BG520500 Rh5BG520600 Rh5BG520800 Rh5BG520900 Rh5BG521100 Rh5CG543900 Rh5CG544100 Rh5CG544400 Rh5CG544500 Rh5CG544600 Rh5CG544800 Rh5CG544900 Rh5CG545000 Rh5CG545200 Rh5DG532700 Rh5DG533100 Rh5DG533200 Rh5DG533400 Rh5DG533500 Rh5DG533600 Rh5DG533700
rosa_wichuraiana Rw5G046310 Rw5G046340 Rw5G046350 Rw5G046360 Rw5G046370 Rw5G046380 Rw5G046400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 560, 768
AccB7I CCANNNNNTGG 1 cut(s) 986
AccBSI CCGCTC 4 cut(s) 54, 493, 1147, 1514
AccII CGCG 6 cut(s) 63, 147, 231, 252, 277, 428
AccIII TCCGGA 1 cut(s) 1528
AclWI GGATC 3 cut(s) 848, 861, 1229
AcsI RAATTY 4 cut(s) 638, 1396, 1428, 1557
AcuI CTGAAG 2 cut(s) 1469, 1701
AcyI GRCGYC 3 cut(s) 105, 132, 243
AfaI GTAC 6 cut(s) 24, 121, 272, 922, 1110, 1893
AfiI CCNNNNNNNGG 5 cut(s) 46, 307, 313, 492, 986
AhlI ACTAGT 1 cut(s) 1250
AjnI CCWGG 2 cut(s) 306, 1873
AluBI AGCT 9 cut(s) 70, 91, 482, 701, 1208, 1403, 1496, 2012, 2028
AluI AGCT 9 cut(s) 70, 91, 482, 701, 1208, 1403, 1496, 2012, 2028
Alw21I GWGCWC 1 cut(s) 93
Alw26I GTCTC 3 cut(s) 689, 1964, 2155
AlwI GGATC 3 cut(s) 848, 861, 1229
AlwNI CAGNNNCTG 2 cut(s) 472, 1943
Ama87I CYCGRG 2 cut(s) 86, 591
Aor13HI TCCGGA 1 cut(s) 1528
AoxI GGCC 4 cut(s) 81, 315, 396, 647
ApeKI GCWGC 4 cut(s) 466, 482, 620, 2119
ApoI RAATTY 4 cut(s) 638, 1396, 1428, 1557
ArsI GACNNNNNNTTYG 4 cut(s) 337, 369, 656, 688
AspLEI GCGC 4 cut(s) 65, 254, 279, 293
AspS9I GGNCC 5 cut(s) 49, 82, 316, 647, 1724
AsuC2I CCSGG 1 cut(s) 1722
AsuHPI GGTGA 6 cut(s) 194, 199, 274, 881, 887, 2104
AvaI CYCGRG 2 cut(s) 86, 591
AvaII GGWCC 2 cut(s) 49, 1724
BamHI GGATCC 1 cut(s) 853
BanII GRGCYC 1 cut(s) 93
BauI CACGAG 1 cut(s) 71
BbsI GAAGAC 1 cut(s) 350
Bbv12I GWGCWC 1 cut(s) 93
BbvI GCAGC 4 cut(s) 469, 478, 607, 2106
BcgI CGANNNNNNTGC 2 cut(s) 284, 318
BciT130I CCWGG 2 cut(s) 308, 1875
BcnI CCSGG 1 cut(s) 1722
BcoDI GTCTC 3 cut(s) 689, 1964, 2155
BcuI ACTAGT 1 cut(s) 1250
BfaI CTAG 8 cut(s) 546, 615, 834, 864, 1191, 1251, 1643, 1923
BfmI CTRYAG 1 cut(s) 1551
BisI GCNGC 7 cut(s) 44, 467, 483, 621, 708, 1148, 2120
BlsI GCNGC 7 cut(s) 45, 468, 484, 622, 709, 1149, 2121
BmcAI AGTACT 1 cut(s) 922
Bme1390I CCNGG 3 cut(s) 308, 1722, 1875
Bme18I GGWCC 2 cut(s) 49, 1724
BmeT110I CYCGRG 2 cut(s) 86, 591
BmgT120I GGNCC 5 cut(s) 49, 82, 316, 647, 1724
BmiI GGNNCC 3 cut(s) 855, 1872, 1908
BmrFI CCNGG 3 cut(s) 308, 1722, 1875
BmrI ACTGGG 1 cut(s) 1069
BmsI GCATC 1 cut(s) 1468
BmuI ACTGGG 1 cut(s) 1069
BpiI GAAGAC 1 cut(s) 350
BpmI CTGGAG 4 cut(s) 901, 1401, 1530, 1896
Bpu10I CCTNAGC 3 cut(s) 17, 312, 702
BpuEI CTTGAG 1 cut(s) 2093
BpuMI CCSGG 1 cut(s) 1722
BsaHI GRCGYC 3 cut(s) 105, 132, 243
BsaI GGTCTC 1 cut(s) 689
BsaJI CCNNGG 6 cut(s) 78, 238, 306, 690, 2037, 2064
BsaWI WCCGGW 1 cut(s) 1528
BsaXI ACNNNNNCTCC 6 cut(s) 140, 170, 194, 224, 1869, 1899
Bsc4I CCNNNNNNNGG 5 cut(s) 46, 307, 313, 492, 986
Bse1I ACTGG 6 cut(s) 268, 379, 918, 1075, 1384, 1513
Bse3DI GCAATG 1 cut(s) 674
BseAI TCCGGA 1 cut(s) 1528
BseBI CCWGG 2 cut(s) 308, 1875
BseDI CCNNGG 6 cut(s) 78, 238, 306, 690, 2037, 2064
BseGI GGATG 5 cut(s) 159, 1537, 1789, 1864, 1996
BseLI CCNNNNNNNGG 5 cut(s) 46, 307, 313, 492, 986
BseMI GCAATG 1 cut(s) 674
BseMII CTCAG 5 cut(s) 8, 326, 1064, 1187, 1631
BseNI ACTGG 6 cut(s) 268, 379, 918, 1075, 1384, 1513
BseRI GAGGAG 5 cut(s) 158, 176, 189, 202, 227
BseXI GCAGC 4 cut(s) 469, 478, 607, 2106
BsgI GTGCAG 1 cut(s) 1275
Bsh1236I CGCG 6 cut(s) 63, 147, 231, 252, 277, 428
Bsh1285I CGRYCG 2 cut(s) 145, 151
BshFI GGCC 4 cut(s) 83, 317, 398, 649
BsiEI CGRYCG 2 cut(s) 145, 151
BsiHKAI GWGCWC 1 cut(s) 93
BsiHKCI CYCGRG 2 cut(s) 86, 591
BsiSI CCGG 5 cut(s) 47, 102, 327, 1529, 1722
BsiWI CGTACG 1 cut(s) 119
BslFI GGGAC 1 cut(s) 230
BslI CCNNNNNNNGG 5 cut(s) 46, 307, 313, 492, 986
BsmAI GTCTC 3 cut(s) 689, 1964, 2155
BsmFI GGGAC 1 cut(s) 230
BsnI GGCC 4 cut(s) 83, 317, 398, 649
Bso31I GGTCTC 1 cut(s) 689
BsoBI CYCGRG 2 cut(s) 86, 591
Bsp1286I GDGCHC 1 cut(s) 93
Bsp13I TCCGGA 1 cut(s) 1528
Bsp143I GATC 7 cut(s) 123, 142, 391, 510, 853, 1003, 1234
Bsp19I CCATGG 1 cut(s) 690
Bsp68I TCGCGA 2 cut(s) 147, 428
BspANI GGCC 4 cut(s) 83, 317, 398, 649
BspCNI CTCAG 5 cut(s) 9, 325, 1063, 1186, 1630
BspEI TCCGGA 1 cut(s) 1528
BspFNI CGCG 6 cut(s) 63, 147, 231, 252, 277, 428
BspHI TCATGA 3 cut(s) 1303, 1432, 1966
BspLI GGNNCC 3 cut(s) 855, 1872, 1908
BspPI GGATC 3 cut(s) 848, 861, 1229
BspTNI GGTCTC 1 cut(s) 689
BsrBI CCGCTC 4 cut(s) 54, 493, 1147, 1514
BsrDI GCAATG 1 cut(s) 674
BsrI ACTGG 6 cut(s) 268, 379, 918, 1075, 1384, 1513
BssECI CCNNGG 6 cut(s) 78, 238, 306, 690, 2037, 2064
BssMI GATC 7 cut(s) 123, 142, 391, 510, 853, 1003, 1234
BssNI GRCGYC 3 cut(s) 105, 132, 243
BssSI CACGAG 1 cut(s) 71
BssT1I CCWWGG 4 cut(s) 78, 690, 2037, 2064
Bst2BI CACGAG 1 cut(s) 71
Bst2UI CCWGG 2 cut(s) 308, 1875
Bst4CI ACNGT 4 cut(s) 119, 152, 286, 1712
Bst6I CTCTTC 2 cut(s) 1574, 1731
BstACI GRCGYC 3 cut(s) 105, 132, 243
BstC8I GCNNGC 2 cut(s) 977, 2124
BstDEI CTNAG 7 cut(s) 17, 312, 570, 702, 1050, 1173, 1617
BstDSI CCRYGG 1 cut(s) 690
BstF5I GGATG 5 cut(s) 159, 1537, 1789, 1864, 1996
BstFNI CGCG 6 cut(s) 63, 147, 231, 252, 277, 428
BstHHI GCGC 4 cut(s) 65, 254, 279, 293
BstKTI GATC 7 cut(s) 126, 145, 394, 513, 856, 1006, 1237
BstMAI GTCTC 3 cut(s) 689, 1964, 2155
BstMBI GATC 7 cut(s) 123, 142, 391, 510, 853, 1003, 1234
BstMCI CGRYCG 2 cut(s) 145, 151
BstMWI GCNNNNNNNGC 8 cut(s) 60, 102, 153, 228, 249, 629, 707, 2119
BstNI CCWGG 2 cut(s) 308, 1875
BstNSI RCATGY 2 cut(s) 979, 2126
BstSCI CCNGG 3 cut(s) 306, 1720, 1873
BstSFI CTRYAG 1 cut(s) 1551
BstUI CGCG 6 cut(s) 63, 147, 231, 252, 277, 428
BstV1I GCAGC 4 cut(s) 469, 478, 607, 2106
BstV2I GAAGAC 1 cut(s) 350
BstX2I RGATCY 2 cut(s) 853, 1234
BstYI RGATCY 2 cut(s) 853, 1234
BsuRI GGCC 4 cut(s) 83, 317, 398, 649
BtgI CCRYGG 1 cut(s) 690
BtsCI GGATG 5 cut(s) 159, 1537, 1789, 1864, 1996
BtsI GCAGTG 1 cut(s) 753
BtsIMutI CAGTG 4 cut(s) 753, 1445, 1506, 1717
BtuMI TCGCGA 2 cut(s) 147, 428
Cac8I GCNNGC 2 cut(s) 977, 2124
CaiI CAGNNNCTG 2 cut(s) 472, 1943
CciI TCATGA 3 cut(s) 1303, 1432, 1966
CfoI GCGC 4 cut(s) 65, 254, 279, 293
Cfr13I GGNCC 5 cut(s) 49, 82, 316, 647, 1724
CpoI CGGWCCG 1 cut(s) 49
CseI GACGC 3 cut(s) 94, 121, 232
Csp6I GTAC 6 cut(s) 23, 120, 271, 921, 1109, 1892
CspI CGGWCCG 1 cut(s) 49
CviQI GTAC 6 cut(s) 23, 120, 271, 921, 1109, 1892
DdeI CTNAG 7 cut(s) 17, 312, 570, 702, 1050, 1173, 1617
DpnI GATC 7 cut(s) 125, 144, 393, 512, 855, 1005, 1236
DpnII GATC 7 cut(s) 123, 142, 391, 510, 853, 1003, 1234
DraI TTTAAA 1 cut(s) 1474
Eam1104I CTCTTC 2 cut(s) 1574, 1731
EarI CTCTTC 2 cut(s) 1574, 1731
EciI GGCGGA 1 cut(s) 254
Ecl136II GAGCTC 1 cut(s) 91
Eco130I CCWWGG 4 cut(s) 78, 690, 2037, 2064
Eco147I AGGCCT 1 cut(s) 398
Eco24I GRGCYC 1 cut(s) 93
Eco31I GGTCTC 1 cut(s) 689
Eco47I GGWCC 2 cut(s) 49, 1724
Eco53kI GAGCTC 1 cut(s) 91
Eco57I CTGAAG 2 cut(s) 1469, 1701
Eco88I CYCGRG 2 cut(s) 86, 591
EcoICRI GAGCTC 1 cut(s) 91
EcoO109I RGGNCCY 2 cut(s) 82, 316
EcoRI GAATTC 1 cut(s) 1396
EcoRII CCWGG 2 cut(s) 306, 1873
EcoT14I CCWWGG 4 cut(s) 78, 690, 2037, 2064
EcoT38I GRGCYC 1 cut(s) 93
ErhI CCWWGG 4 cut(s) 78, 690, 2037, 2064
FaqI GGGAC 1 cut(s) 230
FauI CCCGC 2 cut(s) 48, 68
FauNDI CATATG 2 cut(s) 517, 652
Fnu4HI GCNGC 7 cut(s) 44, 467, 483, 621, 708, 1148, 2120
FokI GGATG 5 cut(s) 146, 1544, 1796, 1871, 2003
FriOI GRGCYC 1 cut(s) 93
Fsp4HI GCNGC 7 cut(s) 44, 467, 483, 621, 708, 1148, 2120
FspBI CTAG 8 cut(s) 546, 615, 834, 864, 1191, 1251, 1643, 1923
GlaI GCGC 4 cut(s) 64, 253, 278, 292
GluI GCNGC 7 cut(s) 44, 467, 483, 621, 708, 1148, 2120
GsuI CTGGAG 4 cut(s) 901, 1401, 1530, 1896
HaeIII GGCC 4 cut(s) 83, 317, 398, 649
HapII CCGG 5 cut(s) 47, 102, 327, 1529, 1722
HgaI GACGC 3 cut(s) 94, 121, 232
HhaI GCGC 4 cut(s) 65, 254, 279, 293
Hin1I GRCGYC 3 cut(s) 105, 132, 243
Hin6I GCGC 4 cut(s) 63, 252, 277, 291
HinP1I GCGC 4 cut(s) 63, 252, 277, 291
HincII GTYRAC 2 cut(s) 1000, 1213
HindII GTYRAC 2 cut(s) 1000, 1213
HinfI GANTC 9 cut(s) 589, 730, 839, 1406, 1525, 1676, 1826, 1919, 2051
HpaI GTTAAC 2 cut(s) 1000, 1213
HpaII CCGG 5 cut(s) 47, 102, 327, 1529, 1722
HphI GGTGA 6 cut(s) 194, 199, 274, 881, 887, 2104
Hpy166II GTNNAC 3 cut(s) 273, 1000, 1213
Hpy188I TCNGA 9 cut(s) 142, 442, 1053, 1176, 1681, 1794, 1852, 2050, 2148
Hpy8I GTNNAC 3 cut(s) 273, 1000, 1213
Hpy99I CGWCG 2 cut(s) 110, 221
HpyAV CCTTC 7 cut(s) 189, 490, 543, 591, 837, 1248, 2134
HpyCH4III ACNGT 4 cut(s) 119, 152, 286, 1712
HpyF10VI GCNNNNNNNGC 8 cut(s) 60, 102, 153, 228, 249, 629, 707, 2119
HpyF3I CTNAG 7 cut(s) 17, 312, 570, 702, 1050, 1173, 1617
Hsp92I GRCGYC 3 cut(s) 105, 132, 243
HspAI GCGC 4 cut(s) 63, 252, 277, 291
Kpn2I TCCGGA 1 cut(s) 1528
KspAI GTTAAC 2 cut(s) 1000, 1213
Kzo9I GATC 7 cut(s) 123, 142, 391, 510, 853, 1003, 1234
LmnI GCTCC 6 cut(s) 161, 1075, 1144, 1382, 1501, 1511
Lsp1109I GCAGC 4 cut(s) 469, 478, 607, 2106
LweI GCATC 1 cut(s) 1468
MaeI CTAG 8 cut(s) 546, 615, 834, 864, 1191, 1251, 1643, 1923
MaeIII GTNAC 8 cut(s) 73, 447, 836, 911, 1032, 1456, 1546, 2092
MalI GATC 7 cut(s) 125, 144, 393, 512, 855, 1005, 1236
MbiI CCGCTC 4 cut(s) 54, 493, 1147, 1514
MboI GATC 7 cut(s) 123, 142, 391, 510, 853, 1003, 1234
MboII GAAGA 7 cut(s) 355, 800, 1244, 1591, 1748, 2089, 2093
MfeI CAATTG 1 cut(s) 1227
MflI RGATCY 2 cut(s) 853, 1234
MhlI GDGCHC 1 cut(s) 93
MlyI GAGTC 3 cut(s) 583, 724, 833
MmeI TCCRAC 1 cut(s) 1122
MroI TCCGGA 1 cut(s) 1528
MspA1I CMGCKG 1 cut(s) 1403
MspI CCGG 5 cut(s) 47, 102, 327, 1529, 1722
MspR9I CCNGG 3 cut(s) 308, 1722, 1875
MunI CAATTG 1 cut(s) 1227
MvaI CCWGG 2 cut(s) 308, 1875
MvnI CGCG 6 cut(s) 63, 147, 231, 252, 277, 428
MwoI GCNNNNNNNGC 8 cut(s) 60, 102, 153, 228, 249, 629, 707, 2119
NciI CCSGG 1 cut(s) 1722
NcoI CCATGG 1 cut(s) 690
NdeI CATATG 2 cut(s) 517, 652
NdeII GATC 7 cut(s) 123, 142, 391, 510, 853, 1003, 1234
NlaIV GGNNCC 3 cut(s) 855, 1872, 1908
NmeAIII GCCGAG 2 cut(s) 72, 219
NmuCI GTSAC 5 cut(s) 73, 836, 1032, 1456, 2092
NruI TCGCGA 2 cut(s) 147, 428
NspI RCATGY 2 cut(s) 979, 2126
PaeI GCATGC 2 cut(s) 979, 2126
PaeR7I CTCGAG 2 cut(s) 86, 591
PagI TCATGA 3 cut(s) 1303, 1432, 1966
PceI AGGCCT 1 cut(s) 398
PcsI WCGNNNNNNNCGW 1 cut(s) 18
PfeI GAWTC 6 cut(s) 1406, 1525, 1676, 1826, 1919, 2051
Pfl23II CGTACG 1 cut(s) 119
PflMI CCANNNNNTGG 1 cut(s) 986
PkrI GCNGC 7 cut(s) 45, 468, 484, 622, 709, 1149, 2121
Ple19I CGATCG 1 cut(s) 145
PleI GAGTC 3 cut(s) 583, 724, 833
PpsI GAGTC 3 cut(s) 583, 724, 833
PsiI TTATAA 2 cut(s) 560, 768
Psp124BI GAGCTC 1 cut(s) 93
Psp6I CCWGG 2 cut(s) 306, 1873
PspGI CCWGG 2 cut(s) 306, 1873
PspLI CGTACG 1 cut(s) 119
PspN4I GGNNCC 3 cut(s) 855, 1872, 1908
PspPI GGNCC 5 cut(s) 49, 82, 316, 647, 1724
PspXI VCTCGAGB 2 cut(s) 86, 591
PstNI CAGNNNCTG 2 cut(s) 472, 1943
PsuI RGATCY 2 cut(s) 853, 1234
PvuI CGATCG 1 cut(s) 145
PvuII CAGCTG 1 cut(s) 1403
RruI TCGCGA 2 cut(s) 147, 428
RsaI GTAC 6 cut(s) 24, 121, 272, 922, 1110, 1893
RsaNI GTAC 6 cut(s) 23, 120, 271, 921, 1109, 1892
Rsr2I CGGWCCG 1 cut(s) 49
RsrII CGGWCCG 1 cut(s) 49
SacI GAGCTC 1 cut(s) 93
SatI GCNGC 7 cut(s) 44, 467, 483, 621, 708, 1148, 2120
Sau3AI GATC 7 cut(s) 123, 142, 391, 510, 853, 1003, 1234
Sau96I GGNCC 5 cut(s) 49, 82, 316, 647, 1724
ScaI AGTACT 1 cut(s) 922
SchI GAGTC 3 cut(s) 583, 724, 833
ScrFI CCNGG 3 cut(s) 308, 1722, 1875
SduI GDGCHC 1 cut(s) 93
SfaNI GCATC 1 cut(s) 1468
SfcI CTRYAG 1 cut(s) 1551
Sfr274I CTCGAG 2 cut(s) 86, 591
SinI GGWCC 2 cut(s) 49, 1724
SlaI CTCGAG 2 cut(s) 86, 591
SmlI CTYRAG 3 cut(s) 86, 591, 2108
SmoI CTYRAG 3 cut(s) 86, 591, 2108
SpeI ACTAGT 1 cut(s) 1250
SphI GCATGC 2 cut(s) 979, 2126
SseBI AGGCCT 1 cut(s) 398
SspMI CTAG 8 cut(s) 546, 615, 834, 864, 1191, 1251, 1643, 1923
SstI GAGCTC 1 cut(s) 93
StuI AGGCCT 1 cut(s) 398
StyD4I CCNGG 3 cut(s) 306, 1720, 1873
StyI CCWWGG 4 cut(s) 78, 690, 2037, 2064
TaaI ACNGT 4 cut(s) 119, 152, 286, 1712
TaqI TCGA 6 cut(s) 12, 87, 390, 457, 592, 1241
TaqII GACCGA 1 cut(s) 671
TatI WGTACW 4 cut(s) 270, 920, 1108, 1891
TauI GCSGC 3 cut(s) 46, 710, 1150
TfiI GAWTC 6 cut(s) 1406, 1525, 1676, 1826, 1919, 2051
TscAI CASTG 4 cut(s) 753, 1452, 1513, 1717
TseFI GTSAC 5 cut(s) 73, 836, 1032, 1456, 2092
TseI GCWGC 4 cut(s) 466, 482, 620, 2119
Tsp45I GTSAC 5 cut(s) 73, 836, 1032, 1456, 2092
TspGWI ACGGA 2 cut(s) 205, 1883
TspRI CASTG 4 cut(s) 753, 1452, 1513, 1717
Van91I CCANNNNNTGG 1 cut(s) 986
VpaK11BI GGWCC 2 cut(s) 49, 1724
XapI RAATTY 4 cut(s) 638, 1396, 1428, 1557
XceI RCATGY 2 cut(s) 979, 2126
XhoI CTCGAG 2 cut(s) 86, 591
XspI CTAG 8 cut(s) 546, 615, 834, 864, 1191, 1251, 1643, 1923
ZrmI AGTACT 1 cut(s) 922
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.