Rroxscaffold_1G00005850

Mediator of RNA polymerase II transcription subunit 15a-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000315
Physical Location & Seq
Reverse (-)
7876048 .. 7888038
11991 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00005850.1

Sequence Viewer

Length: 1593 bp
ATGGATAACAACAATGGCAGTCCTCCTCAAGATGGACAGCCTTCAATGGAAGCAGGAGATTGGAGGAGCAGAATGCCCACGGATATGCGGCAAAGACTTATCAATAAGATAATGTCTACATTGAAGGCGCATCGCCCCATTTCTGGTCAAGAGGGATTAGATGAACTTGAGAAAAATGCTGGAAGTTTGGAGGAAAAGATTTATGCTGCTGCCACTAGCCAGTTGGACTATCTCTGGAAAATTTCTCAGGAGATGCTCACAGTTGTGACCAAGCCACAGAATACAACATCCAATCCTCTAGAATCCAATGGCAAGGGACCTCTCGATTCAGTTGCTGATCAAGGAAAATCAGTCTCAATGTCATTGCCAGCCAATCAGTCCCAAACAAGGCAACATTTCGTACCACAGAACATACAGAATAACATTCTGCCTGCCGGAGTTCAAAGTTATGCTGGGTTGTCATCTGGACTTTCTCCTACCATAAACTATCAAACAAGGGAACAATTTGTACCGCGAAATATTCAGAATAGCATTCTAACTGCTGGAGTTCAAAGTTCTGTTGGCTTATCATCTGCACTATCTCCTACCGGGAACTATCATCCGTATTGCCTCCAACCCCCTCCCCCTGGTCAAAATATTCCCAGCTTATCATATGCACTGCCTCCTCCACAGGGTCTGAATATGTCATCTGCACTACTTGCCTCTATTCCGTCTGGCTTTTCTTCTGCTCCAGCATCTATTATGCGACCTTCCACACTGCTGTCATCTCTCCCTAGGCTTCAGCAGGATCAACAATCAACTTTTCCCCACTCTTCACAATCCATGCTTCAGCAAACAGCAGTGCCACAACAGCAAATGTTGCCCCAACAGCATCAACAGCAACAGTTAACAGGGTCTTCAACAGCTCAGCAGAACAAGAAGAATCCATCGCAGTCAATTGCGGAGCTGTTAACCACAATAAAGAACTCAGAGCAGCAGGTCCCTATGGGCTCTATTCAACAAACTCCGGTCAGTGCTCCCCAGCAAGCTAACATGAACGTACAGAGTGGGATTAACACATTGCACCCAAACGTTATTCCACTTGGTATTCTTCAGAACCAACAACAATATCGGAATCAACTTCAGCAACAATATCAAATCCAGCTACTACATCAACAGCGTCAACAGCTGCAGTTGATGCAGATGCAGCAGATAAATCAACAACTGCAACAGCAGCTGGCTAGACAGTCGCAGACACAGCAAATGCCACAGCTTCACCAAATCAGAGTTGTTGACGCGAACGTGAATGCCTCGTCATCACAGAGTGGGAGTAATATGCTGCAGGCAAACATTGTTTCTCCTCCGCCAAACTCTGTTATTGTTGATAACCAGCATCTGAAGCAAGAACAGGAGCAGAAAATGTTTAAGCATCAACCCGAGCAACCATATCAACAGCTACAGATGCAGAAGCCGCAGATGCTTCAAGAAAAGCAACAGCAAAAGATACAGCAACTAGAGCAACAAGCAAAGCAGCAGCTGTGTCATATTTATTTCATTTATCTCATCTTTCTCACCATTCTGATGGGTGCTCTCTTCTTCGGGACAGGCCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KIX_2

Protein Analysis

530

Amino Acids

58.97

Weight (kDa)

9.04

Isoelectric Point (pI)

77.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIX_2 PF16987 19 - 98 2.3e-22 KIX domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000315)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15790 AT1G15790 AT1G15790 AT1G15790 AT1G15790
fragaria_vesca FvH4_3g12350 FvH4_3g37483 FvH4_3g42320 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42361
malus_domestica MD03G1031600.v1.1 MD03G1031700.v1.1 MD03G1033500.v1.1 MD07G1261500.v1.1 MD11G1035800.v1.1
prunus_persica Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1
pyrus_communis pycom03g02570 pycom03g02580
rosa_chinensis RchiOBHm_Chr4g0419101 RchiOBHm_Chr5g0075711 RchiOBHm_Chr5g0075731 RchiOBHm_Chr5g0075781 RchiOBHm_Chr5g0075801 RchiOBHm_Chr5g0075811 RchiOBHm_Chr5g0075831 RchiOBHm_Chr5g0075841 RchiOBHm_Chr5g0075851 RchiOBHm_Chr5g0075861
rosa_laevigata RLG00000029834 RLG00000036588 RLG00000036591 RLG00000036592 RLG00000036594 RLG00000036595 RLG00000036597 RLG00000036647
rosa_multiflora Rmu_co8127406.1_g000001 Rmu_co8138284.1_g000001 Rmu_sc0002101.1_g000001 Rmu_sc0002101.1_g000006 Rmu_sc0002652.1_g000027 Rmu_sc0002652.1_g000029 Rmu_sc0008562.1_g000002 Rmu_sc0019599.1_g000001 Rmu_sc0019861.1_g000005 Rmu_sc0029317.1_g000001 Rmu_sc0031378.1_g000001 Rmu_ssc0000402.1_g000001
rosa_roxburghii Rroxscaffold_1G00005820 Rroxscaffold_1G00005830 Rroxscaffold_1G00005840 Rroxscaffold_1G00005850 Rroxscaffold_1G00005860 Rroxscaffold_1G00005870 Rroxscaffold_1G00005890 Rroxscaffold_5G00340930 Rroxscaffold_5G00343250 Rroxscaffold_5G00369260
rosa_rugosa Rorug05G0442200 Rorug05G0442300.1 Rorug05G0442400 Rorug05G0442500 Rorug05G0442600 Rorug05G0442700 Rorug05G0442900
rosa_samantha Rh1AG189900 Rh2DG257500 Rh5AG498900 Rh5AG499100 Rh5AG499400 Rh5AG499500 Rh5AG499600 Rh5AG499700 Rh5AG499900 Rh5AG506800 Rh5BG519900 Rh5BG520100 Rh5BG520400 Rh5BG520500 Rh5BG520600 Rh5BG520800 Rh5BG520900 Rh5BG521100 Rh5CG543900 Rh5CG544100 Rh5CG544400 Rh5CG544500 Rh5CG544600 Rh5CG544800 Rh5CG544900 Rh5CG545000 Rh5CG545200 Rh5DG532700 Rh5DG533100 Rh5DG533200 Rh5DG533400 Rh5DG533500 Rh5DG533600 Rh5DG533700
rosa_wichuraiana Rw5G046310 Rw5G046340 Rw5G046350 Rw5G046360 Rw5G046370 Rw5G046380 Rw5G046400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 967
AccI GTMKAC 1 cut(s) 116
AccII CGCG 2 cut(s) 514, 1277
AciI CCGC 5 cut(s) 88, 512, 941, 1343, 1451
AclI AACGTT 1 cut(s) 1071
AclWI GGATC 1 cut(s) 795
AcsI RAATTY 1 cut(s) 240
AcuI CTGAAG 5 cut(s) 764, 812, 1076, 1106, 1397
AdeI CACNNNGTG 1 cut(s) 1304
AfaI GTAC 3 cut(s) 402, 510, 1041
AfiI CCNNNNNNNGG 5 cut(s) 32, 143, 387, 626, 671
AgsI TTSAA 7 cut(s) 45, 124, 443, 551, 900, 998, 1463
AjnI CCWGG 1 cut(s) 625
AleI CACNNNNGTG 1 cut(s) 263
Alw21I GWGCWC 2 cut(s) 1018, 1570
Alw26I GTCTC 1 cut(s) 358
AlwI GGATC 1 cut(s) 795
AlwNI CAGNNNCTG 5 cut(s) 335, 676, 1216, 1375, 1516
Ama87I CYCGRG 1 cut(s) 1415
AoxI GGCC 1 cut(s) 1585
ApeKI GCWGC 9 cut(s) 206, 209, 973, 1168, 1186, 1213, 1318, 1510, 1513
ApoI RAATTY 1 cut(s) 240
AspA2I CCTAGG 1 cut(s) 773
AspLEI GCGC 1 cut(s) 130
AspS9I GGNCC 2 cut(s) 317, 979
AsuC2I CCSGG 1 cut(s) 589
AsuHPI GGTGA 2 cut(s) 1247, 1543
AvaI CYCGRG 1 cut(s) 1415
AvaII GGWCC 2 cut(s) 317, 979
AvrII CCTAGG 1 cut(s) 773
BanII GRGCYC 1 cut(s) 992
BbsI GAAGAC 1 cut(s) 888
Bbv12I GWGCWC 2 cut(s) 1018, 1570
BbvI GCAGC 9 cut(s) 193, 196, 985, 1155, 1198, 1225, 1305, 1522, 1525
BccI CCATC 3 cut(s) 26, 934, 1555
BcgI CGANNNNNNTGC 2 cut(s) 314, 348
BciT130I CCWGG 1 cut(s) 627
BclI TGATCA 1 cut(s) 337
BcnI CCSGG 1 cut(s) 589
BcoDI GTCTC 1 cut(s) 358
BfaI CTAG 5 cut(s) 216, 299, 774, 1221, 1493
BfmI CTRYAG 3 cut(s) 1169, 1319, 1436
BfuAI ACCTGC 1 cut(s) 967
BlnI CCTAGG 1 cut(s) 773
BlpI GCTNAGC 1 cut(s) 906
Bme1390I CCNGG 2 cut(s) 589, 627
Bme18I GGWCC 2 cut(s) 317, 979
BmeT110I CYCGRG 1 cut(s) 1415
BmgT120I GGNCC 2 cut(s) 317, 979
BmiI GGNNCC 2 cut(s) 318, 981
BmrFI CCNGG 2 cut(s) 589, 627
BpiI GAAGAC 1 cut(s) 888
BpmI CTGGAG 2 cut(s) 564, 714
Bpu1102I GCTNAGC 1 cut(s) 906
BpuEI CTTGAG 2 cut(s) 12, 188
BpuMI CCSGG 1 cut(s) 589
BsaJI CCNNGG 3 cut(s) 78, 625, 773
BsaWI WCCGGW 1 cut(s) 1006
Bsc4I CCNNNNNNNGG 5 cut(s) 32, 143, 387, 626, 671
Bse1I ACTGG 1 cut(s) 220
Bse3DI GCAATG 2 cut(s) 362, 1058
BseBI CCWGG 1 cut(s) 627
BseDI CCNNGG 3 cut(s) 78, 625, 773
BseGI GGATG 2 cut(s) 287, 598
BseLI CCNNNNNNNGG 5 cut(s) 32, 143, 387, 626, 671
BseMI GCAATG 2 cut(s) 362, 1058
BseMII CTCAG 3 cut(s) 260, 920, 981
BseNI ACTGG 1 cut(s) 220
BseRI GAGGAG 4 cut(s) 15, 79, 654, 1329
BseXI GCAGC 9 cut(s) 193, 196, 985, 1155, 1198, 1225, 1305, 1522, 1525
BseYI CCCAGC 3 cut(s) 452, 641, 1020
BsgI GTGCAG 2 cut(s) 558, 675
Bsh1236I CGCG 2 cut(s) 514, 1277
BshFI GGCC 1 cut(s) 1587
BsiHKAI GWGCWC 2 cut(s) 1018, 1570
BsiHKCI CYCGRG 1 cut(s) 1415
BsiSI CCGG 3 cut(s) 435, 588, 1007
BslFI GGGAC 3 cut(s) 330, 364, 965
BslI CCNNNNNNNGG 5 cut(s) 32, 143, 387, 626, 671
BsmAI GTCTC 1 cut(s) 358
BsmFI GGGAC 3 cut(s) 330, 364, 965
BsmI GAATGC 3 cut(s) 78, 531, 1291
BsnI GGCC 1 cut(s) 1587
BsoBI CYCGRG 1 cut(s) 1415
Bsp1286I GDGCHC 3 cut(s) 992, 1018, 1570
Bsp143I GATC 2 cut(s) 337, 787
Bsp1720I GCTNAGC 1 cut(s) 906
BspACI CCGC 5 cut(s) 88, 512, 941, 1343, 1451
BspANI GGCC 1 cut(s) 1587
BspCNI CTCAG 3 cut(s) 259, 919, 980
BspFNI CGCG 2 cut(s) 514, 1277
BspLI GGNNCC 2 cut(s) 318, 981
BspMAI CTGCAG 2 cut(s) 1173, 1323
BspMI ACCTGC 1 cut(s) 967
BspPI GGATC 1 cut(s) 795
BsrDI GCAATG 2 cut(s) 362, 1058
BsrI ACTGG 1 cut(s) 220
BssECI CCNNGG 3 cut(s) 78, 625, 773
BssMI GATC 2 cut(s) 337, 787
BssT1I CCWWGG 1 cut(s) 773
Bst2UI CCWGG 1 cut(s) 627
Bst4CI ACNGT 3 cut(s) 262, 885, 1227
Bst6I CTCTTC 2 cut(s) 817, 1577
BstAPI GCANNNNNTGC 3 cut(s) 698, 859, 1177
BstC8I GCNNGC 5 cut(s) 369, 432, 1026, 1218, 1323
BstDEI CTNAG 3 cut(s) 246, 906, 967
BstDSI CCRYGG 1 cut(s) 78
BstF5I GGATG 2 cut(s) 287, 598
BstFNI CGCG 2 cut(s) 514, 1277
BstHHI GCGC 1 cut(s) 130
BstKTI GATC 2 cut(s) 340, 790
BstMAI GTCTC 1 cut(s) 358
BstMBI GATC 2 cut(s) 337, 787
BstNI CCWGG 1 cut(s) 627
BstSCI CCNGG 2 cut(s) 587, 625
BstSFI CTRYAG 3 cut(s) 1169, 1319, 1436
BstUI CGCG 2 cut(s) 514, 1277
BstV1I GCAGC 9 cut(s) 193, 196, 985, 1155, 1198, 1225, 1305, 1522, 1525
BstV2I GAAGAC 1 cut(s) 888
BstXI CCANNNNNNTGG 1 cut(s) 1561
BsuRI GGCC 1 cut(s) 1587
BtgI CCRYGG 1 cut(s) 78
BtgZI GCGATG 2 cut(s) 116, 912
BtsCI GGATG 2 cut(s) 287, 598
BtsI GCAGTG 3 cut(s) 656, 755, 846
BtsIMutI CAGTG 4 cut(s) 656, 755, 846, 1018
BveI ACCTGC 1 cut(s) 967
Cac8I GCNNGC 5 cut(s) 369, 432, 1026, 1218, 1323
CaiI CAGNNNCTG 5 cut(s) 335, 676, 1216, 1375, 1516
CfoI GCGC 1 cut(s) 130
Cfr13I GGNCC 2 cut(s) 317, 979
CseI GACGC 2 cut(s) 1148, 1283
Csp6I GTAC 3 cut(s) 401, 509, 1040
CviAII CATG 2 cut(s) 823, 1033
CviQI GTAC 3 cut(s) 401, 509, 1040
DdeI CTNAG 3 cut(s) 246, 906, 967
DpnI GATC 2 cut(s) 339, 789
DpnII GATC 2 cut(s) 337, 787
DraIII CACNNNGTG 1 cut(s) 1304
Eam1104I CTCTTC 2 cut(s) 817, 1577
EarI CTCTTC 2 cut(s) 817, 1577
EciI GGCGGA 1 cut(s) 1332
Eco130I CCWWGG 1 cut(s) 773
Eco24I GRGCYC 1 cut(s) 992
Eco47I GGWCC 2 cut(s) 317, 979
Eco57I CTGAAG 5 cut(s) 764, 812, 1076, 1106, 1397
Eco88I CYCGRG 1 cut(s) 1415
EcoO109I RGGNCCY 2 cut(s) 317, 979
EcoRII CCWGG 1 cut(s) 625
EcoT14I CCWWGG 1 cut(s) 773
EcoT38I GRGCYC 1 cut(s) 992
ErhI CCWWGG 1 cut(s) 773
FaeI CATG 2 cut(s) 826, 1036
FaqI GGGAC 3 cut(s) 330, 364, 965
FatI CATG 2 cut(s) 822, 1032
FauNDI CATATG 1 cut(s) 652
FbaI TGATCA 1 cut(s) 337
FblI GTMKAC 1 cut(s) 116
FokI GGATG 2 cut(s) 274, 585
FriOI GRGCYC 1 cut(s) 992
FspBI CTAG 5 cut(s) 216, 299, 774, 1221, 1493
GlaI GCGC 1 cut(s) 129
GsaI CCCAGC 3 cut(s) 456, 645, 1024
GsuI CTGGAG 2 cut(s) 564, 714
HaeIII GGCC 1 cut(s) 1587
HapII CCGG 3 cut(s) 435, 588, 1007
HgaI GACGC 2 cut(s) 1148, 1283
HhaI GCGC 1 cut(s) 130
Hin1II CATG 2 cut(s) 826, 1036
Hin6I GCGC 1 cut(s) 128
HinP1I GCGC 1 cut(s) 128
HincII GTYRAC 4 cut(s) 888, 951, 1163, 1273
HindII GTYRAC 4 cut(s) 888, 951, 1163, 1273
HinfI GANTC 4 cut(s) 302, 326, 922, 1114
HpaI GTTAAC 2 cut(s) 888, 951
HpaII CCGG 3 cut(s) 435, 588, 1007
HphI GGTGA 2 cut(s) 1247, 1543
Hpy166II GTNNAC 5 cut(s) 117, 888, 951, 1163, 1273
Hpy188I TCNGA 8 cut(s) 525, 678, 970, 1095, 1113, 1265, 1377, 1560
Hpy188III TCNNGA 9 cut(s) 29, 149, 235, 248, 299, 323, 465, 1463, 1579
Hpy8I GTNNAC 5 cut(s) 117, 888, 951, 1163, 1273
HpyAV CCTTC 3 cut(s) 51, 118, 759
HpyCH4III ACNGT 3 cut(s) 262, 885, 1227
HpyCH4IV ACGT 3 cut(s) 1038, 1071, 1281
HpyF3I CTNAG 3 cut(s) 246, 906, 967
HpySE526I ACGT 3 cut(s) 1038, 1071, 1281
Hsp92II CATG 2 cut(s) 826, 1036
HspAI GCGC 1 cut(s) 128
Ksp22I TGATCA 1 cut(s) 337
KspAI GTTAAC 2 cut(s) 888, 951
Kzo9I GATC 2 cut(s) 337, 787
LmnI GCTCC 5 cut(s) 66, 733, 943, 1021, 1390
Lsp1109I GCAGC 9 cut(s) 193, 196, 985, 1155, 1198, 1225, 1305, 1522, 1525
MaeI CTAG 5 cut(s) 216, 299, 774, 1221, 1493
MaeII ACGT 3 cut(s) 1038, 1071, 1281
MaeIII GTNAC 1 cut(s) 265
MalI GATC 2 cut(s) 339, 789
MboI GATC 2 cut(s) 337, 787
MboII GAAGA 7 cut(s) 714, 804, 888, 931, 1082, 1564, 1567
MfeI CAATTG 1 cut(s) 936
MhlI GDGCHC 3 cut(s) 992, 1018, 1570
MluCI AATT 3 cut(s) 240, 503, 936
MmeI TCCRAC 2 cut(s) 204, 637
MseI TTAA 4 cut(s) 887, 950, 1053, 1404
MslI CAYNNNNRTG 3 cut(s) 83, 263, 1559
MspA1I CMGCKG 3 cut(s) 1168, 1216, 1516
MspI CCGG 3 cut(s) 435, 588, 1007
MspR9I CCNGG 2 cut(s) 589, 627
MunI CAATTG 1 cut(s) 936
Mva1269I GAATGC 3 cut(s) 78, 531, 1291
MvaI CCWGG 1 cut(s) 627
MvnI CGCG 2 cut(s) 514, 1277
NciI CCSGG 1 cut(s) 589
NdeI CATATG 1 cut(s) 652
NdeII GATC 2 cut(s) 337, 787
NlaIII CATG 2 cut(s) 826, 1036
NlaIV GGNNCC 2 cut(s) 318, 981
NmuCI GTSAC 1 cut(s) 265
OliI CACNNNNGTG 1 cut(s) 263
PctI GAATGC 3 cut(s) 78, 531, 1291
PfeI GAWTC 4 cut(s) 302, 326, 922, 1114
PpuMI RGGWCCY 2 cut(s) 317, 979
Psp1406I AACGTT 1 cut(s) 1071
Psp5II RGGWCCY 2 cut(s) 317, 979
Psp6I CCWGG 1 cut(s) 625
PspFI CCCAGC 3 cut(s) 452, 641, 1020
PspGI CCWGG 1 cut(s) 625
PspN4I GGNNCC 2 cut(s) 318, 981
PspPI GGNCC 2 cut(s) 317, 979
PspPPI RGGWCCY 2 cut(s) 317, 979
PsrI GAACNNNNNNTAC 2 cut(s) 492, 524
PstI CTGCAG 2 cut(s) 1173, 1323
PstNI CAGNNNCTG 5 cut(s) 335, 676, 1216, 1375, 1516
PvuII CAGCTG 3 cut(s) 1168, 1216, 1516
RsaI GTAC 3 cut(s) 402, 510, 1041
RsaNI GTAC 3 cut(s) 401, 509, 1040
RseI CAYNNNNRTG 3 cut(s) 83, 263, 1559
SaqAI TTAA 4 cut(s) 887, 950, 1053, 1404
Sau3AI GATC 2 cut(s) 337, 787
Sau96I GGNCC 2 cut(s) 317, 979
ScrFI CCNGG 2 cut(s) 589, 627
SduI GDGCHC 3 cut(s) 992, 1018, 1570
SfcI CTRYAG 3 cut(s) 1169, 1319, 1436
SinI GGWCC 2 cut(s) 317, 979
SmiMI CAYNNNNRTG 3 cut(s) 83, 263, 1559
SmlI CTYRAG 2 cut(s) 27, 167
SmoI CTYRAG 2 cut(s) 27, 167
Sse9I AATT 3 cut(s) 240, 503, 936
SsiI CCGC 5 cut(s) 88, 512, 941, 1343, 1451
SspI AATATT 2 cut(s) 520, 637
SspMI CTAG 5 cut(s) 216, 299, 774, 1221, 1493
StyD4I CCNGG 2 cut(s) 587, 625
StyI CCWWGG 1 cut(s) 773
TaaI ACNGT 3 cut(s) 262, 885, 1227
TaiI ACGT 3 cut(s) 1041, 1074, 1284
TaqI TCGA 1 cut(s) 324
TasI AATT 3 cut(s) 240, 503, 936
TauI GCSGC 2 cut(s) 91, 1453
TfiI GAWTC 4 cut(s) 302, 326, 922, 1114
Tru1I TTAA 4 cut(s) 887, 950, 1053, 1404
Tru9I TTAA 4 cut(s) 887, 950, 1053, 1404
TscAI CASTG 4 cut(s) 663, 762, 846, 1018
TseFI GTSAC 1 cut(s) 265
TseI GCWGC 9 cut(s) 206, 209, 973, 1168, 1186, 1213, 1318, 1510, 1513
Tsp45I GTSAC 1 cut(s) 265
TspDTI ATGAA 3 cut(s) 177, 1049, 1522
TspGWI ACGGA 3 cut(s) 95, 591, 699
TspRI CASTG 4 cut(s) 663, 762, 846, 1018
VpaK11BI GGWCC 2 cut(s) 317, 979
XapI RAATTY 1 cut(s) 240
XbaI TCTAGA 1 cut(s) 298
XcmI CCANNNNNNNNNTGG 1 cut(s) 220
XmaJI CCTAGG 1 cut(s) 773
XmiI GTMKAC 1 cut(s) 116
XspI CTAG 5 cut(s) 216, 299, 774, 1221, 1493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.