Rh5DG533200

Mediator of RNA polymerase II transcription subunit 15a-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000315
Physical Location & Seq
Forward (+)
82174837 .. 82179221
4385 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG533200.1

Sequence Viewer

Length: 1488 bp
ATGCAAAGAATGTCTACATTGAAGGCGCATCGCCCCATTTCTGGTCAAGAGGGATTAGATGAACTCGAGAAAAATGCTGTAAGTTTGGAGGAAAAGATTTATGCTGCTGCCACTAGCCAGTTGGACTATCTCTGGAAAATTTCTCAGGAGATGCTCACAGTTGTGACCAAGCCACAGAATACAACATCCAATCCTCTAGAATCCAATGGCAAGGGACCTCTTGATTCAGTTGCTGATCAAGGACAATCAGTCTCAATGTCATTGCCAGCCAATCAGTCCCAAACAAGGCAACATTTCGTACCACAGAACATACAGAATAACATTCTGCCTGCCGGAGTTCAAAGTTATGCTGGGTTGTCATCTGGACTTTCTCCTACCATAAACTATCAAACAAGGGAACAATTTGTACCGCAAAATATTCAGAATAGCATTCTGACTGCTGGAGTTCAAAGTTCTGTTGGCTTATCATCTGCACTATCTCCTACCGGAAACTATCATCCGTATTGCCTCCAACCCCCTGCCCCTGGTCAAAATATTCCCGGCTTATCATATGCACTGCCTCCTCCACAGGGTCTGAATATGTCTGCACTACTTGCCTCTATTCCGTCTGGCTTTTCTTCTGCTCCAGCATCTATTATGCGACCTTCCACACTGCAGTCATCTCTCCCTAGGCTTCAGCAGAATCAACAATCAACTATTCCCCACTCTTCACAATCCATGCTTCAGCAAACAGCAGTGCCACAACAGCAAATGTTGCCCCAACAGCATCAACAGCAACAGTTAACAGGGTCTTCAACAGATCAGCAGAACAAGAAGAATCCATCGCAGTCGATTTCAGAGCTGTTAACCACAATAAAGAACTCACAGCAGCAGGTCCCTATGGGCTCTATTCAACAGACTCCGGTCAGTGCTCCCCAGCAAGCTAACATGAATGTACAGAGTGGGATTAACACATTGCACCCAAACGTTATTCCACTCAGTATTCTTCAGAACCAACAACAATATCAGAATCAACTTCAGCAACAATATCAAATCCAGCTACTATATCAACAGCGTCAACAGCTGCAGTTGATGCAGATGCAGCAGATAAATCAACAACTGCAACAGCAGCTGGCTAGACAGTCGCAGACACACCAAATGCCACAGCTTCACCAAATCAGAGTTGTTGACGCGAACATGAATGCCTCGTCATCACAGAGTGGGAGTAATATGCTGCAGGCAAACATTGTTTCTCCTCCACCAAATTCTGGTATCGTTGATAACCAGCATCTGAAGCAAGAACAGGAGAAGAAAATGTTTAAGCATCAACCCCAGCAACCATATCAACAGCTACAGATGCAGAAGCCGCAGACGCTTCAAGAAAAGCAACAGCAAAAGATACAGCAACTAGAGCAACAAGCAAAGCACCAGCTGTGTCATATTTATTTCATTTATCTCATCTTTCTCACCATTCTGATGGGGGCTCTCTTCTTCGGGATAGGCCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KIX_2

Protein Analysis

495

Amino Acids

55.09

Weight (kDa)

9.16

Isoelectric Point (pI)

76.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIX_2 PF16987 2 - 64 5.8e-14 KIX domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000315)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15790 AT1G15790 AT1G15790 AT1G15790 AT1G15790
fragaria_vesca FvH4_3g12350 FvH4_3g37483 FvH4_3g42320 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42361
malus_domestica MD03G1031600.v1.1 MD03G1031700.v1.1 MD03G1033500.v1.1 MD07G1261500.v1.1 MD11G1035800.v1.1
prunus_persica Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1
pyrus_communis pycom03g02570 pycom03g02580
rosa_chinensis RchiOBHm_Chr4g0419101 RchiOBHm_Chr5g0075711 RchiOBHm_Chr5g0075731 RchiOBHm_Chr5g0075781 RchiOBHm_Chr5g0075801 RchiOBHm_Chr5g0075811 RchiOBHm_Chr5g0075831 RchiOBHm_Chr5g0075841 RchiOBHm_Chr5g0075851 RchiOBHm_Chr5g0075861
rosa_laevigata RLG00000029834 RLG00000036588 RLG00000036591 RLG00000036592 RLG00000036594 RLG00000036595 RLG00000036597 RLG00000036647
rosa_multiflora Rmu_co8127406.1_g000001 Rmu_co8138284.1_g000001 Rmu_sc0002101.1_g000001 Rmu_sc0002101.1_g000006 Rmu_sc0002652.1_g000027 Rmu_sc0002652.1_g000029 Rmu_sc0008562.1_g000002 Rmu_sc0019599.1_g000001 Rmu_sc0019861.1_g000005 Rmu_sc0029317.1_g000001 Rmu_sc0031378.1_g000001 Rmu_ssc0000402.1_g000001
rosa_roxburghii Rroxscaffold_1G00005820 Rroxscaffold_1G00005830 Rroxscaffold_1G00005840 Rroxscaffold_1G00005850 Rroxscaffold_1G00005860 Rroxscaffold_1G00005870 Rroxscaffold_1G00005890 Rroxscaffold_5G00340930 Rroxscaffold_5G00343250 Rroxscaffold_5G00369260
rosa_rugosa Rorug05G0442200 Rorug05G0442300.1 Rorug05G0442400 Rorug05G0442500 Rorug05G0442600 Rorug05G0442700 Rorug05G0442900
rosa_samantha Rh1AG189900 Rh2DG257500 Rh5AG498900 Rh5AG499100 Rh5AG499400 Rh5AG499500 Rh5AG499600 Rh5AG499700 Rh5AG499900 Rh5AG506800 Rh5BG519900 Rh5BG520100 Rh5BG520400 Rh5BG520500 Rh5BG520600 Rh5BG520800 Rh5BG520900 Rh5BG521100 Rh5CG543900 Rh5CG544100 Rh5CG544400 Rh5CG544500 Rh5CG544600 Rh5CG544800 Rh5CG544900 Rh5CG545000 Rh5CG545200 Rh5DG532700 Rh5DG533100 Rh5DG533200 Rh5DG533400 Rh5DG533500 Rh5DG533600 Rh5DG533700
rosa_wichuraiana Rw5G046310 Rw5G046340 Rw5G046350 Rw5G046360 Rw5G046370 Rw5G046380 Rw5G046400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 862
AccB7I CCANNNNNTGG 1 cut(s) 1247
AccI GTMKAC 1 cut(s) 14
AccII CGCG 1 cut(s) 1172
AciI CCGC 2 cut(s) 410, 1346
AclI AACGTT 1 cut(s) 966
AcsI RAATTY 2 cut(s) 138, 1243
AcuI CTGAAG 5 cut(s) 659, 707, 971, 1001, 1292
AdeI CACNNNGTG 1 cut(s) 1199
AfaI GTAC 3 cut(s) 300, 408, 936
AfiI CCNNNNNNNGG 5 cut(s) 41, 285, 524, 569, 1247
AgsI TTSAA 6 cut(s) 22, 341, 449, 795, 893, 1358
AhdI GACNNNNNGTC 1 cut(s) 248
AjnI CCWGG 1 cut(s) 523
AleI CACNNNNGTG 1 cut(s) 161
AluBI AGCT 8 cut(s) 841, 923, 1039, 1063, 1111, 1147, 1330, 1411
AluI AGCT 8 cut(s) 841, 923, 1039, 1063, 1111, 1147, 1330, 1411
Alw21I GWGCWC 1 cut(s) 913
Alw26I GTCTC 1 cut(s) 256
AlwNI CAGNNNCTG 4 cut(s) 233, 574, 1111, 1270
Ama87I CYCGRG 1 cut(s) 65
AoxI GGCC 1 cut(s) 1480
ApeKI GCWGC 7 cut(s) 104, 107, 868, 1063, 1081, 1108, 1213
ApoI RAATTY 2 cut(s) 138, 1243
AspA2I CCTAGG 1 cut(s) 668
AspLEI GCGC 1 cut(s) 28
AspS9I GGNCC 2 cut(s) 215, 874
AsuC2I CCSGG 1 cut(s) 540
AsuHPI GGTGA 2 cut(s) 1142, 1438
AvaI CYCGRG 1 cut(s) 65
AvaII GGWCC 2 cut(s) 215, 874
AvrII CCTAGG 1 cut(s) 668
BanII GRGCYC 2 cut(s) 887, 1465
BbsI GAAGAC 1 cut(s) 783
Bbv12I GWGCWC 1 cut(s) 913
BbvI GCAGC 7 cut(s) 91, 94, 880, 1050, 1093, 1120, 1200
BccI CCATC 2 cut(s) 829, 1450
BcgI CGANNNNNNTGC 2 cut(s) 56, 90
BciT130I CCWGG 1 cut(s) 525
BclI TGATCA 1 cut(s) 235
BcnI CCSGG 1 cut(s) 540
BcoDI GTCTC 1 cut(s) 256
BfaI CTAG 5 cut(s) 114, 197, 669, 1116, 1388
BfmI CTRYAG 4 cut(s) 653, 1064, 1214, 1331
BfuAI ACCTGC 1 cut(s) 862
BisI GCNGC 8 cut(s) 105, 108, 869, 1064, 1082, 1109, 1214, 1346
BlnI CCTAGG 1 cut(s) 668
BlsI GCNGC 8 cut(s) 106, 109, 870, 1065, 1083, 1110, 1215, 1347
Bme1390I CCNGG 2 cut(s) 525, 540
Bme18I GGWCC 2 cut(s) 215, 874
BmeRI GACNNNNNGTC 1 cut(s) 248
BmeT110I CYCGRG 1 cut(s) 65
BmgT120I GGNCC 2 cut(s) 215, 874
BmiI GGNNCC 2 cut(s) 216, 876
BmrFI CCNGG 2 cut(s) 525, 540
BmsI GCATC 9 cut(s) 37, 141, 638, 775, 1062, 1068, 1276, 1312, 1326
BoxI GACNNNNGTC 1 cut(s) 902
BpiI GAAGAC 1 cut(s) 783
BpmI CTGGAG 2 cut(s) 462, 609
BpuMI CCSGG 1 cut(s) 540
BsaJI CCNNGG 2 cut(s) 523, 668
BsaWI WCCGGW 2 cut(s) 485, 901
Bsc4I CCNNNNNNNGG 5 cut(s) 41, 285, 524, 569, 1247
Bse1I ACTGG 1 cut(s) 118
Bse3DI GCAATG 2 cut(s) 260, 953
BseBI CCWGG 1 cut(s) 525
BseDI CCNNGG 2 cut(s) 523, 668
BseGI GGATG 2 cut(s) 185, 496
BseLI CCNNNNNNNGG 5 cut(s) 41, 285, 524, 569, 1247
BseMI GCAATG 2 cut(s) 260, 953
BseMII CTCAG 2 cut(s) 158, 991
BseNI ACTGG 1 cut(s) 118
BseRI GAGGAG 2 cut(s) 552, 1224
BseXI GCAGC 7 cut(s) 91, 94, 880, 1050, 1093, 1120, 1200
BseYI CCCAGC 3 cut(s) 350, 915, 1311
BsgI GTGCAG 2 cut(s) 456, 570
Bsh1236I CGCG 1 cut(s) 1172
BshFI GGCC 1 cut(s) 1482
BsiHKAI GWGCWC 1 cut(s) 913
BsiHKCI CYCGRG 1 cut(s) 65
BsiSI CCGG 4 cut(s) 333, 486, 540, 902
BslFI GGGAC 3 cut(s) 228, 262, 860
BslI CCNNNNNNNGG 5 cut(s) 41, 285, 524, 569, 1247
BsmAI GTCTC 1 cut(s) 256
BsmFI GGGAC 3 cut(s) 228, 262, 860
BsmI GAATGC 2 cut(s) 429, 1186
BsnI GGCC 1 cut(s) 1482
BsoBI CYCGRG 1 cut(s) 65
Bsp1286I GDGCHC 3 cut(s) 887, 913, 1465
Bsp1407I TGTACA 1 cut(s) 934
Bsp143I GATC 2 cut(s) 235, 799
BspACI CCGC 2 cut(s) 410, 1346
BspANI GGCC 1 cut(s) 1482
BspCNI CTCAG 2 cut(s) 157, 990
BspFNI CGCG 1 cut(s) 1172
BspLI GGNNCC 2 cut(s) 216, 876
BspMAI CTGCAG 3 cut(s) 657, 1068, 1218
BspMI ACCTGC 1 cut(s) 862
BsrDI GCAATG 2 cut(s) 260, 953
BsrGI TGTACA 1 cut(s) 934
BsrI ACTGG 1 cut(s) 118
BssECI CCNNGG 2 cut(s) 523, 668
BssMI GATC 2 cut(s) 235, 799
BssT1I CCWWGG 1 cut(s) 668
Bst2UI CCWGG 1 cut(s) 525
Bst4CI ACNGT 3 cut(s) 160, 780, 1122
Bst6I CTCTTC 2 cut(s) 712, 1472
BstAPI GCANNNNNTGC 3 cut(s) 593, 754, 1072
BstAUI TGTACA 1 cut(s) 934
BstC8I GCNNGC 5 cut(s) 267, 330, 921, 1113, 1218
BstDEI CTNAG 2 cut(s) 144, 977
BstF5I GGATG 2 cut(s) 185, 496
BstFNI CGCG 1 cut(s) 1172
BstHHI GCGC 1 cut(s) 28
BstKTI GATC 2 cut(s) 238, 802
BstMAI GTCTC 1 cut(s) 256
BstMBI GATC 2 cut(s) 235, 799
BstNI CCWGG 1 cut(s) 525
BstPAI GACNNNNGTC 1 cut(s) 902
BstSCI CCNGG 2 cut(s) 523, 538
BstSFI CTRYAG 4 cut(s) 653, 1064, 1214, 1331
BstUI CGCG 1 cut(s) 1172
BstV1I GCAGC 7 cut(s) 91, 94, 880, 1050, 1093, 1120, 1200
BstV2I GAAGAC 1 cut(s) 783
BstXI CCANNNNNNTGG 1 cut(s) 1456
BsuRI GGCC 1 cut(s) 1482
BtgZI GCGATG 2 cut(s) 14, 807
BtsCI GGATG 2 cut(s) 185, 496
BtsI GCAGTG 3 cut(s) 554, 650, 741
BtsIMutI CAGTG 4 cut(s) 554, 650, 741, 913
BveI ACCTGC 1 cut(s) 862
Cac8I GCNNGC 5 cut(s) 267, 330, 921, 1113, 1218
CaiI CAGNNNCTG 4 cut(s) 233, 574, 1111, 1270
CfoI GCGC 1 cut(s) 28
Cfr13I GGNCC 2 cut(s) 215, 874
CseI GACGC 3 cut(s) 1043, 1178, 1360
Csp6I GTAC 3 cut(s) 299, 407, 935
CviAII CATG 3 cut(s) 718, 928, 1177
CviQI GTAC 3 cut(s) 299, 407, 935
DdeI CTNAG 2 cut(s) 144, 977
DpnI GATC 2 cut(s) 237, 801
DpnII GATC 2 cut(s) 235, 799
DraIII CACNNNGTG 1 cut(s) 1199
DriI GACNNNNNGTC 1 cut(s) 248
Eam1104I CTCTTC 2 cut(s) 712, 1472
Eam1105I GACNNNNNGTC 1 cut(s) 248
EarI CTCTTC 2 cut(s) 712, 1472
Eco130I CCWWGG 1 cut(s) 668
Eco24I GRGCYC 2 cut(s) 887, 1465
Eco47I GGWCC 2 cut(s) 215, 874
Eco57I CTGAAG 5 cut(s) 659, 707, 971, 1001, 1292
Eco88I CYCGRG 1 cut(s) 65
EcoO109I RGGNCCY 2 cut(s) 215, 874
EcoRII CCWGG 1 cut(s) 523
EcoT14I CCWWGG 1 cut(s) 668
EcoT38I GRGCYC 2 cut(s) 887, 1465
ErhI CCWWGG 1 cut(s) 668
FaeI CATG 3 cut(s) 721, 931, 1180
FaqI GGGAC 3 cut(s) 228, 262, 860
FatI CATG 3 cut(s) 717, 927, 1176
FauNDI CATATG 1 cut(s) 550
FbaI TGATCA 1 cut(s) 235
FblI GTMKAC 1 cut(s) 14
Fnu4HI GCNGC 8 cut(s) 105, 108, 869, 1064, 1082, 1109, 1214, 1346
FokI GGATG 2 cut(s) 172, 483
FriOI GRGCYC 2 cut(s) 887, 1465
Fsp4HI GCNGC 8 cut(s) 105, 108, 869, 1064, 1082, 1109, 1214, 1346
FspBI CTAG 5 cut(s) 114, 197, 669, 1116, 1388
GlaI GCGC 1 cut(s) 27
GluI GCNGC 8 cut(s) 105, 108, 869, 1064, 1082, 1109, 1214, 1346
GsaI CCCAGC 3 cut(s) 354, 919, 1315
GsuI CTGGAG 2 cut(s) 462, 609
HaeIII GGCC 1 cut(s) 1482
HapII CCGG 4 cut(s) 333, 486, 540, 902
HgaI GACGC 3 cut(s) 1043, 1178, 1360
HhaI GCGC 1 cut(s) 28
Hin1II CATG 3 cut(s) 721, 931, 1180
Hin6I GCGC 1 cut(s) 26
HinP1I GCGC 1 cut(s) 26
HincII GTYRAC 4 cut(s) 783, 846, 1058, 1168
HindII GTYRAC 4 cut(s) 783, 846, 1058, 1168
HinfI GANTC 6 cut(s) 200, 224, 682, 817, 898, 1009
HpaI GTTAAC 2 cut(s) 783, 846
HpaII CCGG 4 cut(s) 333, 486, 540, 902
HphI GGTGA 2 cut(s) 1142, 1438
Hpy166II GTNNAC 5 cut(s) 15, 783, 846, 1058, 1168
Hpy188I TCNGA 9 cut(s) 423, 435, 576, 838, 990, 1008, 1160, 1272, 1455
Hpy188III TCNNGA 9 cut(s) 47, 67, 133, 146, 197, 221, 363, 1358, 1474
Hpy8I GTNNAC 5 cut(s) 15, 783, 846, 1058, 1168
HpyAV CCTTC 2 cut(s) 16, 654
HpyCH4III ACNGT 3 cut(s) 160, 780, 1122
HpyCH4IV ACGT 1 cut(s) 966
HpyF3I CTNAG 2 cut(s) 144, 977
HpySE526I ACGT 1 cut(s) 966
Hsp92II CATG 3 cut(s) 721, 931, 1180
HspAI GCGC 1 cut(s) 26
Ksp22I TGATCA 1 cut(s) 235
KspAI GTTAAC 2 cut(s) 783, 846
Kzo9I GATC 2 cut(s) 235, 799
LmnI GCTCC 2 cut(s) 628, 916
Lsp1109I GCAGC 7 cut(s) 91, 94, 880, 1050, 1093, 1120, 1200
LweI GCATC 9 cut(s) 37, 141, 638, 775, 1062, 1068, 1276, 1312, 1326
MaeI CTAG 5 cut(s) 114, 197, 669, 1116, 1388
MaeII ACGT 1 cut(s) 966
MaeIII GTNAC 1 cut(s) 163
MalI GATC 2 cut(s) 237, 801
MboI GATC 2 cut(s) 235, 799
MboII GAAGA 8 cut(s) 609, 699, 783, 826, 977, 1300, 1459, 1462
MhlI GDGCHC 3 cut(s) 887, 913, 1465
MluCI AATT 3 cut(s) 138, 401, 1243
MlyI GAGTC 1 cut(s) 892
MmeI TCCRAC 2 cut(s) 102, 535
MseI TTAA 4 cut(s) 782, 845, 948, 1299
MslI CAYNNNNRTG 2 cut(s) 161, 1454
MspA1I CMGCKG 3 cut(s) 1063, 1111, 1411
MspI CCGG 4 cut(s) 333, 486, 540, 902
MspR9I CCNGG 2 cut(s) 525, 540
Mva1269I GAATGC 2 cut(s) 429, 1186
MvaI CCWGG 1 cut(s) 525
MvnI CGCG 1 cut(s) 1172
NciI CCSGG 1 cut(s) 540
NdeI CATATG 1 cut(s) 550
NdeII GATC 2 cut(s) 235, 799
NlaIII CATG 3 cut(s) 721, 931, 1180
NlaIV GGNNCC 2 cut(s) 216, 876
NmuCI GTSAC 1 cut(s) 163
OliI CACNNNNGTG 1 cut(s) 161
PaeR7I CTCGAG 1 cut(s) 65
PctI GAATGC 2 cut(s) 429, 1186
PfeI GAWTC 5 cut(s) 200, 224, 682, 817, 1009
PflMI CCANNNNNTGG 1 cut(s) 1247
PkrI GCNGC 8 cut(s) 106, 109, 870, 1065, 1083, 1110, 1215, 1347
PleI GAGTC 1 cut(s) 892
PpsI GAGTC 1 cut(s) 892
PpuMI RGGWCCY 2 cut(s) 215, 874
PshAI GACNNNNGTC 1 cut(s) 902
Psp1406I AACGTT 1 cut(s) 966
Psp5II RGGWCCY 2 cut(s) 215, 874
Psp6I CCWGG 1 cut(s) 523
PspFI CCCAGC 3 cut(s) 350, 915, 1311
PspGI CCWGG 1 cut(s) 523
PspN4I GGNNCC 2 cut(s) 216, 876
PspPI GGNCC 2 cut(s) 215, 874
PspPPI RGGWCCY 2 cut(s) 215, 874
PsrI GAACNNNNNNTAC 2 cut(s) 390, 422
PstI CTGCAG 3 cut(s) 657, 1068, 1218
PstNI CAGNNNCTG 4 cut(s) 233, 574, 1111, 1270
PvuII CAGCTG 3 cut(s) 1063, 1111, 1411
RsaI GTAC 3 cut(s) 300, 408, 936
RsaNI GTAC 3 cut(s) 299, 407, 935
RseI CAYNNNNRTG 2 cut(s) 161, 1454
SaqAI TTAA 4 cut(s) 782, 845, 948, 1299
SatI GCNGC 8 cut(s) 105, 108, 869, 1064, 1082, 1109, 1214, 1346
Sau3AI GATC 2 cut(s) 235, 799
Sau96I GGNCC 2 cut(s) 215, 874
SchI GAGTC 1 cut(s) 892
ScrFI CCNGG 2 cut(s) 525, 540
SduI GDGCHC 3 cut(s) 887, 913, 1465
SfaNI GCATC 9 cut(s) 37, 141, 638, 775, 1062, 1068, 1276, 1312, 1326
SfcI CTRYAG 4 cut(s) 653, 1064, 1214, 1331
Sfr274I CTCGAG 1 cut(s) 65
SinI GGWCC 2 cut(s) 215, 874
SlaI CTCGAG 1 cut(s) 65
SmiMI CAYNNNNRTG 2 cut(s) 161, 1454
SmlI CTYRAG 1 cut(s) 65
SmoI CTYRAG 1 cut(s) 65
Sse9I AATT 3 cut(s) 138, 401, 1243
SsiI CCGC 2 cut(s) 410, 1346
SspI AATATT 2 cut(s) 418, 535
SspMI CTAG 5 cut(s) 114, 197, 669, 1116, 1388
StyD4I CCNGG 2 cut(s) 523, 538
StyI CCWWGG 1 cut(s) 668
TaaI ACNGT 3 cut(s) 160, 780, 1122
TaiI ACGT 1 cut(s) 969
TaqI TCGA 2 cut(s) 66, 830
TasI AATT 3 cut(s) 138, 401, 1243
TatI WGTACW 1 cut(s) 934
TauI GCSGC 1 cut(s) 1348
TfiI GAWTC 5 cut(s) 200, 224, 682, 817, 1009
Tru1I TTAA 4 cut(s) 782, 845, 948, 1299
Tru9I TTAA 4 cut(s) 782, 845, 948, 1299
TscAI CASTG 4 cut(s) 561, 657, 741, 913
TseFI GTSAC 1 cut(s) 163
TseI GCWGC 7 cut(s) 104, 107, 868, 1063, 1081, 1108, 1213
Tsp45I GTSAC 1 cut(s) 163
TspDTI ATGAA 4 cut(s) 75, 944, 1193, 1417
TspGWI ACGGA 2 cut(s) 489, 594
TspRI CASTG 4 cut(s) 561, 657, 741, 913
Van91I CCANNNNNTGG 1 cut(s) 1247
VpaK11BI GGWCC 2 cut(s) 215, 874
XapI RAATTY 2 cut(s) 138, 1243
XbaI TCTAGA 1 cut(s) 196
XcmI CCANNNNNNNNNTGG 1 cut(s) 118
XhoI CTCGAG 1 cut(s) 65
XmaJI CCTAGG 1 cut(s) 668
XmiI GTMKAC 1 cut(s) 14
XspI CTAG 5 cut(s) 114, 197, 669, 1116, 1388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.