Rmu_sc0019861.1_g000005

Mediator of RNA polymerase II transcription subunit 15a-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0019861.1
Physical Location & Seq
Reverse (-)
18782 .. 22990
4209 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0019861.1_g000005.1.cds

Sequence Viewer

Length: 2499 bp
atggtaaggttcatggataacaacgatgggagtcctcctaacggtggagagcctgcaatgggtgcaggagattggaggaacaaactgcaggcggattcgcggcaaagaattgtcaataagataatggatacattgaagaggcatcttcctttctccggtcaagagggattgcatgaactcaagaaaattgctgttaggttcgaggaaaagatttatactgctgccacaagtcagtcagattatctacggaaaatttctctgaagatgctcactatggaggccaagtctcagaccaaaatggccaattctttacaatccaactctgctgtagggtcttctggtatgcaacctcaagtcaccaatcaaggacaactcttatcagaaaacattcaaagtaacattccacctgctggagttcaaaattctgctggcttatcatctgcactaccccctacctctgggctcagcttatcatctgtactagctcctaccccggcactaaatacgtctgccttattatctgcgctaccccctgcccctcgtagaaatatgcctgccagcttatcatctgcattaccttctccacaggacgtgaacatttctagttcatcatttgaactatttcctatctgcggtctagttcccttgaagaaggatgcaatccagtcagattggaaggctcatagcaagatttgcggggctagtgagtatagatgtgactgtggcacactattttccaggaatgatagcttcataactcatagagctttctgtgatgcatcggccgctgaagaaagtgcaaggtttggttcaacttcaacagccaccaacattaatattccgagcttcatgtcggactcatcttccgctttacctcctgccttcagtctagacttattgactaattatcataggcaaatgcaaggacagcaacaggtagttcctcaacagcaacagcagcaatcaaagtattcacagcagcggatttctcagcaacagatacaacaagaacttatccgaaatatccaacagcaacaagagcagcagcagatgctattacaaaaaacaccattgtcatcttctcagcaatctcatgtacaatcagcatctgctgcagtggaatcttttctctgtaggcttcagcagaatcaacaattagctatttcccagttgacacaacccatgcttcagcaaacagcaatgccacaacagcaaatattgccgccacagcatcaacagcaacagttaacagcatctctggattccacggcccagattcaagataaaaatggagctgattggcaagaggaggtctatcaaaagataaaagtcatgaaggagacatacctaaccacactaagagagatataccagaaaaatgttactaaacttcagcagcctaagtcgtatcagcttgagaagctgaaaatgcttaagaccatgctggagcacctcataacagtgttacaggtttccaaaagtaacatttcacctgttttgaagtggaagttgggtttatatgagaagcagataatagctttcattaatacaaatagacccaagaagcttgattcttctctgcaacaagggcacctcccttcacctcatttgcactccatagagcactcccaatcccaaattactcaagtgcaatctcatgaaaatcatatgagtccccaactgcattcaatgaacttacaaggatctgtggcaacaatgcagcagaacaacgtgacaggcttgcagcaaaactatgtgtcttctttgtcaggggtttcaactgcacagaagaacccgatgaatccattgcaatcaagttccaacacagatccaggacaaggaaacccactgtactcatcacagcaggtccctgttagttctatccaagaaatctgtgtcagtggtccccaacaagctaacaagaatgccttgtcatcacagagtgggattaacatgctgcaagcaaacattaatccccttcagtcaaattctgattttcttcataaccgatatctgcaacaaggacagcaattgaaacagattatactcgaaaaactgaatgaacagcgacagccgcaggagcagttgatgcagaagcagcagatatttcaacaacaacagcagctgctgcctggacagttggagtcccagcttcaccaaatcagtgttgttaatgacatgaacatgaatcccttgtcatcagcacagagtgggagtgatatgctgcagggaagcattgattccctcaagtcaaattctggtatggttgataaccagtgtcagaagcaagaaactttctctgtgaacttcaagcaactgtatccacagctacagatgcagcagcaatggatgcagaaaccgcagatgcttcaagaaaagcaacagcagcagatacagcaacaagcaaagcagcggctgcatcttatttatttcatctatctcatctgtctcgttattctatacattgctgctgttttcgggaaaggctattggatttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

832

Amino Acids

93.0

Weight (kDa)

9.05

Isoelectric Point (pI)

69.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000315)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15790 AT1G15790 AT1G15790 AT1G15790 AT1G15790
fragaria_vesca FvH4_3g12350 FvH4_3g37483 FvH4_3g42320 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42361
malus_domestica MD03G1031600.v1.1 MD03G1031700.v1.1 MD03G1033500.v1.1 MD07G1261500.v1.1 MD11G1035800.v1.1
prunus_persica Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1
pyrus_communis pycom03g02570 pycom03g02580
rosa_chinensis RchiOBHm_Chr4g0419101 RchiOBHm_Chr5g0075711 RchiOBHm_Chr5g0075731 RchiOBHm_Chr5g0075781 RchiOBHm_Chr5g0075801 RchiOBHm_Chr5g0075811 RchiOBHm_Chr5g0075831 RchiOBHm_Chr5g0075841 RchiOBHm_Chr5g0075851 RchiOBHm_Chr5g0075861
rosa_laevigata RLG00000029834 RLG00000036588 RLG00000036591 RLG00000036592 RLG00000036594 RLG00000036595 RLG00000036597 RLG00000036647
rosa_multiflora Rmu_co8127406.1_g000001 Rmu_co8138284.1_g000001 Rmu_sc0002101.1_g000001 Rmu_sc0002101.1_g000006 Rmu_sc0002652.1_g000027 Rmu_sc0002652.1_g000029 Rmu_sc0008562.1_g000002 Rmu_sc0019599.1_g000001 Rmu_sc0019861.1_g000005 Rmu_sc0029317.1_g000001 Rmu_sc0031378.1_g000001 Rmu_ssc0000402.1_g000001
rosa_roxburghii Rroxscaffold_1G00005820 Rroxscaffold_1G00005830 Rroxscaffold_1G00005840 Rroxscaffold_1G00005850 Rroxscaffold_1G00005860 Rroxscaffold_1G00005870 Rroxscaffold_1G00005890 Rroxscaffold_5G00340930 Rroxscaffold_5G00343250 Rroxscaffold_5G00369260
rosa_rugosa Rorug05G0442200 Rorug05G0442300.1 Rorug05G0442400 Rorug05G0442500 Rorug05G0442600 Rorug05G0442700 Rorug05G0442900
rosa_samantha Rh1AG189900 Rh2DG257500 Rh5AG498900 Rh5AG499100 Rh5AG499400 Rh5AG499500 Rh5AG499600 Rh5AG499700 Rh5AG499900 Rh5AG506800 Rh5BG519900 Rh5BG520100 Rh5BG520400 Rh5BG520500 Rh5BG520600 Rh5BG520800 Rh5BG520900 Rh5BG521100 Rh5CG543900 Rh5CG544100 Rh5CG544400 Rh5CG544500 Rh5CG544600 Rh5CG544800 Rh5CG544900 Rh5CG545000 Rh5CG545200 Rh5DG532700 Rh5DG533100 Rh5DG533200 Rh5DG533400 Rh5DG533500 Rh5DG533600 Rh5DG533700
rosa_wichuraiana Rw5G046310 Rw5G046340 Rw5G046350 Rw5G046360 Rw5G046370 Rw5G046380 Rw5G046400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 415
Acc36I ACCTGC 2 cut(s) 415, 1855
AccB1I GGYRCC 1 cut(s) 1590
AccB7I CCANNNNNTGG 1 cut(s) 410
AccII CGCG 1 cut(s) 100
AclWI GGATC 2 cut(s) 1711, 1823
AcoI YGGCCR 2 cut(s) 300, 783
AcsI RAATTY 4 cut(s) 252, 421, 1987, 2254
AcuI CTGAAG 7 cut(s) 281, 810, 868, 1124, 1172, 1376, 1964
AdeI CACNNNGTG 2 cut(s) 1943, 2210
AfaI GTAC 3 cut(s) 480, 1098, 1853
AfiI CCNNNNNNNGG 8 cut(s) 41, 44, 59, 155, 410, 458, 632, 1838
AflII CTTAAG 1 cut(s) 1433
AjiI CACGTC 1 cut(s) 592
AjnI CCWGG 3 cut(s) 737, 1831, 2131
AjuI GAANNNNNNNTTGG 2 cut(s) 1493, 1525
Alw21I GWGCWC 2 cut(s) 1452, 1626
Alw26I GTCTC 3 cut(s) 291, 1334, 2453
AlwI GGATC 2 cut(s) 1711, 1823
AlwNI CAGNNNCTG 4 cut(s) 1109, 2125, 2128, 2416
AoxI GGCC 4 cut(s) 279, 300, 783, 1269
ApoI RAATTY 4 cut(s) 252, 421, 1987, 2254
AseI ATTAAT 3 cut(s) 834, 1545, 1971
Asp700I GAANNNNTTC 3 cut(s) 387, 621, 1125
AspLEI GCGC 1 cut(s) 526
AspS9I GGNCC 3 cut(s) 1270, 1867, 1904
AsuC2I CCSGG 1 cut(s) 494
AsuHPI GGTGA 4 cut(s) 349, 1482, 1593, 2147
AvaII GGWCC 2 cut(s) 1867, 1904
BaeGI GKGCMC 1 cut(s) 1593
BalI TGGCCA 1 cut(s) 302
BanI GGYRCC 1 cut(s) 1590
BanII GRGCYC 1 cut(s) 465
BarI GAAGNNNNNNTAC 2 cut(s) 1328, 1360
BbsI GAAGAC 2 cut(s) 327, 1752
Bbv12I GWGCWC 2 cut(s) 1452, 1626
BccI CCATC 1 cut(s) 20
BceAI ACGGC 1 cut(s) 1284
BciT130I CCWGG 3 cut(s) 739, 1833, 2133
BciVI GTATCC 2 cut(s) 121, 2331
BcnI CCSGG 1 cut(s) 494
BcoDI GTCTC 3 cut(s) 291, 1334, 2453
BfaI CTAG 5 cut(s) 482, 603, 638, 702, 890
BfmI CTRYAG 6 cut(s) 86, 327, 1113, 1132, 2225, 2330
BfrI CTTAAG 1 cut(s) 1433
BfuAI ACCTGC 2 cut(s) 415, 1855
BfuI GTATCC 2 cut(s) 121, 2331
BlpI GCTNAGC 1 cut(s) 464
Bme1390I CCNGG 4 cut(s) 494, 739, 1833, 2133
Bme18I GGWCC 2 cut(s) 1867, 1904
BmgBI CACGTC 1 cut(s) 592
BmgT120I GGNCC 3 cut(s) 1270, 1867, 1904
BmiI GGNNCC 3 cut(s) 1592, 1869, 1906
BmrFI CCNGG 4 cut(s) 494, 739, 1833, 2133
BmrI ACTGGG 1 cut(s) 1162
BmuI ACTGGG 1 cut(s) 1162
BpiI GAAGAC 2 cut(s) 327, 1752
BpmI CTGGAG 2 cut(s) 432, 1466
Bpu1102I GCTNAGC 1 cut(s) 464
BpuEI CTTGAG 5 cut(s) 164, 336, 1436, 1629, 2231
BpuMI CCSGG 1 cut(s) 494
BsaJI CCNNGG 2 cut(s) 492, 1266
BsaWI WCCGGW 1 cut(s) 155
BsaXI ACNNNNNCTCC 2 cut(s) 269, 299
Bsc4I CCNNNNNNNGG 8 cut(s) 41, 44, 59, 155, 410, 458, 632, 1838
Bse1I ACTGG 3 cut(s) 664, 1168, 2275
Bse3DI GCAATG 5 cut(s) 63, 1206, 1805, 2351, 2463
BseBI CCWGG 3 cut(s) 739, 1833, 2133
BseDI CCNNGG 2 cut(s) 492, 1266
BseGI GGATG 2 cut(s) 661, 2355
BseLI CCNNNNNNNGG 8 cut(s) 41, 44, 59, 155, 410, 458, 632, 1838
BseMI GCAATG 5 cut(s) 63, 1206, 1805, 2351, 2463
BseMII CTCAG 4 cut(s) 302, 478, 1004, 1097
BseNI ACTGG 3 cut(s) 664, 1168, 2275
BseRI GAGGAG 1 cut(s) 1322
BseSI GKGCMC 1 cut(s) 1593
BseX3I CGGCCG 1 cut(s) 783
BseYI CCCAGC 1 cut(s) 2148
BsgI GTGCAG 3 cut(s) 84, 426, 1767
Bsh1236I CGCG 1 cut(s) 100
Bsh1285I CGRYCG 1 cut(s) 786
BshFI GGCC 4 cut(s) 281, 302, 785, 1271
BshNI GGYRCC 1 cut(s) 1590
BsiEI CGRYCG 1 cut(s) 786
BsiHKAI GWGCWC 2 cut(s) 1452, 1626
BsiSI CCGG 2 cut(s) 156, 494
BslFI GGGAC 4 cut(s) 1659, 1853, 1890, 2131
BslI CCNNNNNNNGG 8 cut(s) 41, 44, 59, 155, 410, 458, 632, 1838
BsmAI GTCTC 3 cut(s) 291, 1334, 2453
BsmFI GGGAC 4 cut(s) 1659, 1853, 1890, 2131
BsmI GAATGC 2 cut(s) 1684, 1930
BsnI GGCC 4 cut(s) 281, 302, 785, 1271
Bsp1286I GDGCHC 4 cut(s) 465, 1452, 1593, 1626
Bsp1407I TGTACA 1 cut(s) 1096
Bsp143I GATC 2 cut(s) 1703, 1828
Bsp1720I GCTNAGC 1 cut(s) 464
BspANI GGCC 4 cut(s) 281, 302, 785, 1271
BspCNI CTCAG 4 cut(s) 301, 477, 1003, 1096
BspFNI CGCG 1 cut(s) 100
BspHI TCATGA 2 cut(s) 1332, 1657
BspLI GGNNCC 3 cut(s) 1592, 1869, 1906
BspMAI CTGCAG 3 cut(s) 90, 1117, 2229
BspMI ACCTGC 2 cut(s) 415, 1855
BspPI GGATC 2 cut(s) 1711, 1823
BspT107I GGYRCC 1 cut(s) 1590
BspTI CTTAAG 1 cut(s) 1433
BsrDI GCAATG 5 cut(s) 63, 1206, 1805, 2351, 2463
BsrGI TGTACA 1 cut(s) 1096
BsrI ACTGG 3 cut(s) 664, 1168, 2275
BssECI CCNNGG 2 cut(s) 492, 1266
BssMI GATC 2 cut(s) 1703, 1828
Bst2UI CCWGG 3 cut(s) 739, 1833, 2133
Bst4CI ACNGT 7 cut(s) 44, 722, 1245, 1462, 1851, 2139, 2319
Bst6I CTCTTC 1 cut(s) 131
BstAFI CTTAAG 1 cut(s) 1433
BstAPI GCANNNNNTGC 9 cut(s) 62, 693, 1051, 1112, 1219, 2089, 2128, 2350, 2416
BstAUI TGTACA 1 cut(s) 1096
BstC8I GCNNGC 7 cut(s) 54, 90, 430, 555, 559, 1742, 1962
BstDEI CTNAG 6 cut(s) 288, 464, 990, 1083, 1358, 1401
BstDSI CCRYGG 1 cut(s) 1266
BstF5I GGATG 2 cut(s) 661, 2355
BstFNI CGCG 1 cut(s) 100
BstHHI GCGC 1 cut(s) 526
BstKTI GATC 2 cut(s) 1706, 1831
BstMAI GTCTC 3 cut(s) 291, 1334, 2453
BstMBI GATC 2 cut(s) 1703, 1828
BstMCI CGRYCG 1 cut(s) 786
BstNI CCWGG 3 cut(s) 739, 1833, 2133
BstNSI RCATGY 1 cut(s) 1957
BstSCI CCNGG 4 cut(s) 492, 737, 1831, 2131
BstSFI CTRYAG 6 cut(s) 86, 327, 1113, 1132, 2225, 2330
BstSLI GKGCMC 1 cut(s) 1593
BstUI CGCG 1 cut(s) 100
BstV2I GAAGAC 2 cut(s) 327, 1752
BstX2I RGATCY 2 cut(s) 1703, 1828
BstYI RGATCY 2 cut(s) 1703, 1828
BstZI CGGCCG 1 cut(s) 783
BsuI GTATCC 2 cut(s) 121, 2331
BsuRI GGCC 4 cut(s) 281, 302, 785, 1271
BtgI CCRYGG 1 cut(s) 1266
BtrI CACGTC 1 cut(s) 592
BtsCI GGATG 2 cut(s) 661, 2355
BtsI GCAGTG 1 cut(s) 1122
BtsIMutI CAGTG 6 cut(s) 1122, 1467, 1847, 1906, 2170, 2282
BveI ACCTGC 2 cut(s) 415, 1855
Cac8I GCNNGC 7 cut(s) 54, 90, 430, 555, 559, 1742, 1962
CaiI CAGNNNCTG 4 cut(s) 1109, 2125, 2128, 2416
CciI TCATGA 2 cut(s) 1332, 1657
CfoI GCGC 1 cut(s) 526
Cfr13I GGNCC 3 cut(s) 1270, 1867, 1904
Csp6I GTAC 3 cut(s) 479, 1097, 1852
CviQI GTAC 3 cut(s) 479, 1097, 1852
DdeI CTNAG 6 cut(s) 288, 464, 990, 1083, 1358, 1401
DpnI GATC 2 cut(s) 1705, 1830
DpnII GATC 2 cut(s) 1703, 1828
DraIII CACNNNGTG 2 cut(s) 1943, 2210
EaeI YGGCCR 2 cut(s) 300, 783
EagI CGGCCG 1 cut(s) 783
Eam1104I CTCTTC 1 cut(s) 131
EarI CTCTTC 1 cut(s) 131
EciI GGCGGA 1 cut(s) 107
EclXI CGGCCG 1 cut(s) 783
Eco24I GRGCYC 1 cut(s) 465
Eco32I GATATC 1 cut(s) 2012
Eco47I GGWCC 2 cut(s) 1867, 1904
Eco52I CGGCCG 1 cut(s) 783
Eco57I CTGAAG 7 cut(s) 281, 810, 868, 1124, 1172, 1376, 1964
EcoO109I RGGNCCY 1 cut(s) 1867
EcoRII CCWGG 3 cut(s) 737, 1831, 2131
EcoRV GATATC 1 cut(s) 2012
EcoT22I ATGCAT 1 cut(s) 781
EcoT38I GRGCYC 1 cut(s) 465
FalI AAGNNNNNCTT 2 cut(s) 1913, 1945
FaqI GGGAC 4 cut(s) 1659, 1853, 1890, 2131
FauI CCCGC 1 cut(s) 689
FauNDI CATATG 1 cut(s) 1668
FokI GGATG 2 cut(s) 668, 2362
FriOI GRGCYC 1 cut(s) 465
FspBI CTAG 5 cut(s) 482, 603, 638, 702, 890
GlaI GCGC 1 cut(s) 525
GsaI CCCAGC 1 cut(s) 2152
GsuI CTGGAG 2 cut(s) 432, 1466
HaeIII GGCC 4 cut(s) 281, 302, 785, 1271
HapII CCGG 2 cut(s) 156, 494
HhaI GCGC 1 cut(s) 526
Hin6I GCGC 1 cut(s) 524
HinP1I GCGC 1 cut(s) 524
HincII GTYRAC 2 cut(s) 1173, 1248
HindII GTYRAC 2 cut(s) 1173, 1248
HindIII AAGCTT 1 cut(s) 1565
HpaI GTTAAC 1 cut(s) 1248
HpaII CCGG 2 cut(s) 156, 494
HphI GGTGA 4 cut(s) 349, 1482, 1593, 2147
Hpy166II GTNNAC 4 cut(s) 595, 1173, 1248, 2305
Hpy188III TCNNGA 9 cut(s) 161, 181, 890, 1259, 1280, 1333, 1658, 2372, 2479
Hpy8I GTNNAC 4 cut(s) 595, 1173, 1248, 2305
HpyAV CCTTC 7 cut(s) 588, 646, 670, 892, 1330, 1608, 1988
HpyCH4III ACNGT 7 cut(s) 44, 722, 1245, 1462, 1851, 2139, 2319
HpyCH4IV ACGT 3 cut(s) 506, 591, 1731
HpyF3I CTNAG 6 cut(s) 288, 464, 990, 1083, 1358, 1401
HpySE526I ACGT 3 cut(s) 506, 591, 1731
HspAI GCGC 1 cut(s) 524
KspAI GTTAAC 1 cut(s) 1248
Kzo9I GATC 2 cut(s) 1703, 1828
LmnI GCTCC 4 cut(s) 490, 1292, 1447, 2080
MaeI CTAG 5 cut(s) 482, 603, 638, 702, 890
MaeII ACGT 3 cut(s) 506, 591, 1731
MaeIII GTNAC 7 cut(s) 355, 395, 716, 1381, 1464, 1481, 1732
MalI GATC 2 cut(s) 1705, 1830
MboI GATC 2 cut(s) 1703, 1828
MfeI CAATTG 1 cut(s) 2030
MflI RGATCY 2 cut(s) 1703, 1828
MhlI GDGCHC 4 cut(s) 465, 1452, 1593, 1626
MlsI TGGCCA 1 cut(s) 302
MluNI TGGCCA 1 cut(s) 302
MlyI GAGTC 4 cut(s) 40, 851, 1681, 2153
MmeI TCCRAC 5 cut(s) 342, 834, 1051, 1845, 2121
Mox20I TGGCCA 1 cut(s) 302
Mph1103I ATGCAT 1 cut(s) 781
MroXI GAANNNNTTC 3 cut(s) 387, 621, 1125
MscI TGGCCA 1 cut(s) 302
MseI TTAA 8 cut(s) 834, 1247, 1434, 1545, 1950, 1971, 2172, 2497
MslI CAYNNNNRTG 2 cut(s) 1460, 2183
Msp20I TGGCCA 1 cut(s) 302
MspA1I CMGCKG 4 cut(s) 788, 982, 2125, 2413
MspCI CTTAAG 1 cut(s) 1433
MspI CCGG 2 cut(s) 156, 494
MspR9I CCNGG 4 cut(s) 494, 739, 1833, 2133
MunI CAATTG 1 cut(s) 2030
Mva1269I GAATGC 2 cut(s) 1684, 1930
MvaI CCWGG 3 cut(s) 739, 1833, 2133
MvnI CGCG 1 cut(s) 100
NciI CCSGG 1 cut(s) 494
NdeI CATATG 1 cut(s) 1668
NdeII GATC 2 cut(s) 1703, 1828
NlaIV GGNNCC 3 cut(s) 1592, 1869, 1906
NmuCI GTSAC 3 cut(s) 355, 716, 1732
NsiI ATGCAT 1 cut(s) 781
NspI RCATGY 1 cut(s) 1957
PagI TCATGA 2 cut(s) 1332, 1657
PaqCI CACCTGC 1 cut(s) 415
PctI GAATGC 2 cut(s) 1684, 1930
PdmI GAANNNNTTC 3 cut(s) 387, 621, 1125
PfeI GAWTC 9 cut(s) 95, 1121, 1147, 1262, 1276, 1571, 1801, 2188, 2240
PflMI CCANNNNNTGG 1 cut(s) 410
PfoI TCCNGGA 2 cut(s) 737, 1831
PleI GAGTC 4 cut(s) 39, 851, 1680, 2152
PpsI GAGTC 4 cut(s) 39, 851, 1680, 2152
PpuMI RGGWCCY 1 cut(s) 1867
PshBI ATTAAT 3 cut(s) 834, 1545, 1971
Psp5II RGGWCCY 1 cut(s) 1867
Psp6I CCWGG 3 cut(s) 737, 1831, 2131
PspFI CCCAGC 1 cut(s) 2148
PspGI CCWGG 3 cut(s) 737, 1831, 2131
PspN4I GGNNCC 3 cut(s) 1592, 1869, 1906
PspPI GGNCC 3 cut(s) 1270, 1867, 1904
PspPPI RGGWCCY 1 cut(s) 1867
PstI CTGCAG 3 cut(s) 90, 1117, 2229
PstNI CAGNNNCTG 4 cut(s) 1109, 2125, 2128, 2416
PsuI RGATCY 2 cut(s) 1703, 1828
PvuII CAGCTG 1 cut(s) 2125
RsaI GTAC 3 cut(s) 480, 1098, 1853
RsaNI GTAC 3 cut(s) 479, 1097, 1852
RseI CAYNNNNRTG 2 cut(s) 1460, 2183
SaqAI TTAA 8 cut(s) 834, 1247, 1434, 1545, 1950, 1971, 2172, 2497
Sau3AI GATC 2 cut(s) 1703, 1828
Sau96I GGNCC 3 cut(s) 1270, 1867, 1904
SchI GAGTC 4 cut(s) 40, 851, 1681, 2153
ScrFI CCNGG 4 cut(s) 494, 739, 1833, 2133
SduI GDGCHC 4 cut(s) 465, 1452, 1593, 1626
SfcI CTRYAG 6 cut(s) 86, 327, 1113, 1132, 2225, 2330
SinI GGWCC 2 cut(s) 1867, 1904
SmiMI CAYNNNNRTG 2 cut(s) 1460, 2183
SmlI CTYRAG 6 cut(s) 179, 351, 1415, 1433, 1644, 2246
SmoI CTYRAG 6 cut(s) 179, 351, 1415, 1433, 1644, 2246
SspI AATATT 2 cut(s) 838, 1218
SspMI CTAG 5 cut(s) 482, 603, 638, 702, 890
StyD4I CCNGG 4 cut(s) 492, 737, 1831, 2131
TaaI ACNGT 7 cut(s) 44, 722, 1245, 1462, 1851, 2139, 2319
TaiI ACGT 3 cut(s) 509, 594, 1734
TaqI TCGA 2 cut(s) 201, 2049
TatI WGTACW 3 cut(s) 478, 1096, 1851
TauI GCSGC 5 cut(s) 103, 788, 1225, 2077, 2416
TfiI GAWTC 9 cut(s) 95, 1121, 1147, 1262, 1276, 1571, 1801, 2188, 2240
Tru1I TTAA 8 cut(s) 834, 1247, 1434, 1545, 1950, 1971, 2172, 2497
Tru9I TTAA 8 cut(s) 834, 1247, 1434, 1545, 1950, 1971, 2172, 2497
TscAI CASTG 6 cut(s) 1122, 1467, 1854, 1906, 2170, 2282
TseFI GTSAC 3 cut(s) 355, 716, 1732
Tsp45I GTSAC 3 cut(s) 355, 716, 1732
TspGWI ACGGA 1 cut(s) 262
TspRI CASTG 6 cut(s) 1122, 1467, 1854, 1906, 2170, 2282
Van91I CCANNNNNTGG 1 cut(s) 410
Vha464I CTTAAG 1 cut(s) 1433
VpaK11BI GGWCC 2 cut(s) 1867, 1904
VspI ATTAAT 3 cut(s) 834, 1545, 1971
XapI RAATTY 4 cut(s) 252, 421, 1987, 2254
XbaI TCTAGA 1 cut(s) 889
XceI RCATGY 1 cut(s) 1957
XmnI GAANNNNTTC 3 cut(s) 387, 621, 1125
XspI CTAG 5 cut(s) 482, 603, 638, 702, 890
Zsp2I ATGCAT 1 cut(s) 781
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.