Mediator of RNA polymerase II transcription subunit 15a-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| KIX_2 | PF16987 | 48 - 125 | 2.3e-28 | KIX domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 154, 478 |
| Acc36I | ACCTGC | 3 cut(s) | 154, 478, 1114 |
| AccB1I | GGYRCC | 1 cut(s) | 153 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 473 |
| AccII | CGCG | 1 cut(s) | 175 |
| AciI | CCGC | 3 cut(s) | 175, 746, 1104 |
| AclWI | GGATC | 2 cut(s) | 737, 925 |
| AcoI | YGGCCR | 1 cut(s) | 366 |
| AcsI | RAATTY | 5 cut(s) | 318, 484, 804, 871, 1009 |
| AcuI | CTGAAG | 1 cut(s) | 779 |
| AfaI | GTAC | 4 cut(s) | 78, 659, 683, 713 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 116, 119, 163, 230, 473, 521, 1097 |
| AflIII | ACRYGT | 1 cut(s) | 1212 |
| AgsI | TTSAA | 5 cut(s) | 211, 455, 482, 835, 1038 |
| AjnI | CCWGG | 3 cut(s) | 826, 893, 1090 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 827, 859 |
| AluBI | AGCT | 3 cut(s) | 608, 757, 1151 |
| AluI | AGCT | 3 cut(s) | 608, 757, 1151 |
| Alw21I | GWGCWC | 1 cut(s) | 1165 |
| Alw26I | GTCTC | 2 cut(s) | 338, 357 |
| AlwI | GGATC | 2 cut(s) | 737, 925 |
| AoxI | GGCC | 2 cut(s) | 366, 524 |
| ApeKI | GCWGC | 5 cut(s) | 287, 979, 1003, 1069, 1120 |
| ApoI | RAATTY | 5 cut(s) | 318, 484, 804, 871, 1009 |
| AseI | ATTAAT | 2 cut(s) | 560, 879 |
| AspLEI | GCGC | 1 cut(s) | 786 |
| AspS9I | GGNCC | 1 cut(s) | 524 |
| AsuC2I | CCSGG | 1 cut(s) | 523 |
| AsuHPI | GGTGA | 3 cut(s) | 245, 412, 816 |
| BalI | TGGCCA | 1 cut(s) | 368 |
| BanI | GGYRCC | 1 cut(s) | 153 |
| BanII | GRGCYC | 1 cut(s) | 1139 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 641, 673 |
| BbsI | GAAGAC | 2 cut(s) | 390, 1011 |
| Bbv12I | GWGCWC | 1 cut(s) | 1165 |
| BbvI | GCAGC | 5 cut(s) | 274, 991, 1015, 1081, 1132 |
| BccI | CCATC | 3 cut(s) | 82, 988, 1201 |
| BciT130I | CCWGG | 3 cut(s) | 828, 895, 1092 |
| BcnI | CCSGG | 1 cut(s) | 523 |
| BcoDI | GTCTC | 2 cut(s) | 338, 357 |
| BfmI | CTRYAG | 1 cut(s) | 1118 |
| BfoI | RGCGCY | 1 cut(s) | 787 |
| BfuAI | ACCTGC | 3 cut(s) | 154, 478, 1114 |
| BisI | GCNGC | 6 cut(s) | 176, 288, 980, 1004, 1070, 1121 |
| BlsI | GCNGC | 6 cut(s) | 177, 289, 981, 1005, 1071, 1122 |
| Bme1390I | CCNGG | 4 cut(s) | 523, 828, 895, 1092 |
| BmgT120I | GGNCC | 1 cut(s) | 524 |
| BmiI | GGNNCC | 4 cut(s) | 155, 964, 1102, 1128 |
| BmrFI | CCNGG | 4 cut(s) | 523, 828, 895, 1092 |
| BmrI | ACTGGG | 1 cut(s) | 600 |
| BmsI | GCATC | 3 cut(s) | 127, 321, 575 |
| BmuI | ACTGGG | 1 cut(s) | 600 |
| BpiI | GAAGAC | 2 cut(s) | 390, 1011 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 97, 129 |
| BpmI | CTGGAG | 2 cut(s) | 495, 800 |
| BpuEI | CTTGAG | 5 cut(s) | 99, 230, 399, 770, 888 |
| BpuMI | CCSGG | 1 cut(s) | 523 |
| Bsa29I | ATCGAT | 1 cut(s) | 1063 |
| BsaI | GGTCTC | 1 cut(s) | 338 |
| BsaJI | CCNNGG | 1 cut(s) | 893 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 335, 365 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 116, 119, 163, 230, 473, 521, 1097 |
| Bse1I | ACTGG | 2 cut(s) | 423, 595 |
| Bse3DI | GCAATG | 1 cut(s) | 138 |
| BseBI | CCWGG | 3 cut(s) | 828, 895, 1092 |
| BseCI | ATCGAT | 1 cut(s) | 1063 |
| BseDI | CCNNGG | 1 cut(s) | 893 |
| BseGI | GGATG | 1 cut(s) | 142 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 116, 119, 163, 230, 473, 521, 1097 |
| BseMI | GCAATG | 1 cut(s) | 138 |
| BseMII | CTCAG | 1 cut(s) | 368 |
| BseNI | ACTGG | 2 cut(s) | 423, 595 |
| BseRI | GAGGAG | 2 cut(s) | 102, 635 |
| BseXI | GCAGC | 5 cut(s) | 274, 991, 1015, 1081, 1132 |
| BseYI | CCCAGC | 1 cut(s) | 392 |
| BsgI | GTGCAG | 1 cut(s) | 489 |
| Bsh1236I | CGCG | 1 cut(s) | 175 |
| BshFI | GGCC | 2 cut(s) | 368, 526 |
| BshNI | GGYRCC | 1 cut(s) | 153 |
| BshVI | ATCGAT | 1 cut(s) | 1063 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1165 |
| BsiSI | CCGG | 1 cut(s) | 522 |
| BslFI | GGGAC | 1 cut(s) | 703 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 116, 119, 163, 230, 473, 521, 1097 |
| BsmAI | GTCTC | 2 cut(s) | 338, 357 |
| BsmFI | GGGAC | 1 cut(s) | 703 |
| BsmI | GAATGC | 1 cut(s) | 1189 |
| BsnI | GGCC | 2 cut(s) | 368, 526 |
| Bso31I | GGTCTC | 1 cut(s) | 338 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1139, 1165 |
| Bsp143I | GATC | 3 cut(s) | 636, 742, 930 |
| BspACI | CCGC | 3 cut(s) | 175, 746, 1104 |
| BspANI | GGCC | 2 cut(s) | 368, 526 |
| BspCNI | CTCAG | 1 cut(s) | 367 |
| BspDI | ATCGAT | 1 cut(s) | 1063 |
| BspFNI | CGCG | 1 cut(s) | 175 |
| BspHI | TCATGA | 2 cut(s) | 645, 916 |
| BspLI | GGNNCC | 4 cut(s) | 155, 964, 1102, 1128 |
| BspMAI | CTGCAG | 1 cut(s) | 1122 |
| BspMI | ACCTGC | 3 cut(s) | 154, 478, 1114 |
| BspPI | GGATC | 2 cut(s) | 737, 925 |
| BspT107I | GGYRCC | 1 cut(s) | 153 |
| BspTNI | GGTCTC | 1 cut(s) | 338 |
| BsrDI | GCAATG | 1 cut(s) | 138 |
| BsrI | ACTGG | 2 cut(s) | 423, 595 |
| BssECI | CCNNGG | 1 cut(s) | 893 |
| BssMI | GATC | 3 cut(s) | 636, 742, 930 |
| Bst2UI | CCWGG | 3 cut(s) | 828, 895, 1092 |
| Bst4CI | ACNGT | 2 cut(s) | 583, 796 |
| Bst6I | CTCTTC | 1 cut(s) | 206 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 137, 541 |
| BstC8I | GCNNGC | 4 cut(s) | 66, 129, 493, 1001 |
| BstDEI | CTNAG | 2 cut(s) | 354, 671 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 114 |
| BstF5I | GGATG | 1 cut(s) | 142 |
| BstFNI | CGCG | 1 cut(s) | 175 |
| BstH2I | RGCGCY | 1 cut(s) | 787 |
| BstHHI | GCGC | 1 cut(s) | 786 |
| BstKTI | GATC | 3 cut(s) | 639, 745, 933 |
| BstMAI | GTCTC | 2 cut(s) | 338, 357 |
| BstMBI | GATC | 3 cut(s) | 636, 742, 930 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 137, 532, 541, 550, 754, 976 |
| BstNI | CCWGG | 3 cut(s) | 828, 895, 1092 |
| BstNSI | RCATGY | 1 cut(s) | 1216 |
| BstSCI | CCNGG | 4 cut(s) | 521, 826, 893, 1090 |
| BstSFI | CTRYAG | 1 cut(s) | 1118 |
| BstUI | CGCG | 1 cut(s) | 175 |
| BstV1I | GCAGC | 5 cut(s) | 274, 991, 1015, 1081, 1132 |
| BstV2I | GAAGAC | 2 cut(s) | 390, 1011 |
| BstX2I | RGATCY | 1 cut(s) | 742 |
| BstYI | RGATCY | 1 cut(s) | 742 |
| Bsu15I | ATCGAT | 1 cut(s) | 1063 |
| BsuRI | GGCC | 2 cut(s) | 368, 526 |
| BsuTUI | ATCGAT | 1 cut(s) | 1063 |
| BtsCI | GGATG | 1 cut(s) | 142 |
| BtsI | GCAGTG | 1 cut(s) | 1115 |
| BtsIMutI | CAGTG | 3 cut(s) | 1106, 1115, 1165 |
| BveI | ACCTGC | 3 cut(s) | 154, 478, 1114 |
| Cac8I | GCNNGC | 4 cut(s) | 66, 129, 493, 1001 |
| CciI | TCATGA | 2 cut(s) | 645, 916 |
| CfoI | GCGC | 1 cut(s) | 786 |
| Cfr13I | GGNCC | 1 cut(s) | 524 |
| ClaI | ATCGAT | 1 cut(s) | 1063 |
| CsiI | ACCWGGT | 1 cut(s) | 826 |
| Csp6I | GTAC | 4 cut(s) | 77, 658, 682, 712 |
| CviAII | CATG | 6 cut(s) | 646, 775, 917, 1054, 1180, 1213 |
| CviQI | GTAC | 4 cut(s) | 77, 658, 682, 712 |
| DdeI | CTNAG | 2 cut(s) | 354, 671 |
| DpnI | GATC | 3 cut(s) | 638, 744, 932 |
| DpnII | GATC | 3 cut(s) | 636, 742, 930 |
| EaeI | YGGCCR | 1 cut(s) | 366 |
| Eam1104I | CTCTTC | 1 cut(s) | 206 |
| EarI | CTCTTC | 1 cut(s) | 206 |
| Eco24I | GRGCYC | 1 cut(s) | 1139 |
| Eco31I | GGTCTC | 1 cut(s) | 338 |
| Eco57I | CTGAAG | 1 cut(s) | 779 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 114 |
| EcoRII | CCWGG | 3 cut(s) | 826, 893, 1090 |
| EcoT38I | GRGCYC | 1 cut(s) | 1139 |
| FaeI | CATG | 6 cut(s) | 649, 778, 920, 1057, 1183, 1216 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 28 |
| FaqI | GGGAC | 1 cut(s) | 703 |
| FatI | CATG | 6 cut(s) | 645, 774, 916, 1053, 1179, 1212 |
| Fnu4HI | GCNGC | 6 cut(s) | 176, 288, 980, 1004, 1070, 1121 |
| FokI | GGATG | 1 cut(s) | 149 |
| FriOI | GRGCYC | 1 cut(s) | 1139 |
| Fsp4HI | GCNGC | 6 cut(s) | 176, 288, 980, 1004, 1070, 1121 |
| GlaI | GCGC | 1 cut(s) | 785 |
| GluI | GCNGC | 6 cut(s) | 176, 288, 980, 1004, 1070, 1121 |
| GsaI | CCCAGC | 1 cut(s) | 396 |
| GsuI | CTGGAG | 2 cut(s) | 495, 800 |
| HaeII | RGCGCY | 1 cut(s) | 787 |
| HaeIII | GGCC | 2 cut(s) | 368, 526 |
| HapII | CCGG | 1 cut(s) | 522 |
| HhaI | GCGC | 1 cut(s) | 786 |
| Hin1II | CATG | 6 cut(s) | 649, 778, 920, 1057, 1183, 1216 |
| Hin6I | GCGC | 1 cut(s) | 784 |
| HinP1I | GCGC | 1 cut(s) | 784 |
| HincII | GTYRAC | 1 cut(s) | 1177 |
| HindII | GTYRAC | 1 cut(s) | 1177 |
| HindIII | AAGCTT | 1 cut(s) | 1149 |
| HinfI | GANTC | 6 cut(s) | 7, 20, 106, 170, 575, 716 |
| HpaII | CCGG | 1 cut(s) | 522 |
| HphI | GGTGA | 3 cut(s) | 245, 412, 816 |
| Hpy166II | GTNNAC | 1 cut(s) | 1177 |
| Hpy188I | TCNGA | 5 cut(s) | 304, 357, 445, 742, 927 |
| Hpy188III | TCNNGA | 4 cut(s) | 247, 586, 646, 917 |
| Hpy8I | GTNNAC | 1 cut(s) | 1177 |
| HpyAV | CCTTC | 3 cut(s) | 643, 731, 829 |
| HpyCH4III | ACNGT | 2 cut(s) | 583, 796 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 137, 532, 541, 550, 754, 976 |
| HpyF3I | CTNAG | 2 cut(s) | 354, 671 |
| Hsp92II | CATG | 6 cut(s) | 649, 778, 920, 1057, 1183, 1216 |
| HspAI | GCGC | 1 cut(s) | 784 |
| Kzo9I | GATC | 3 cut(s) | 636, 742, 930 |
| LmnI | GCTCC | 3 cut(s) | 605, 781, 1168 |
| Lsp1109I | GCAGC | 5 cut(s) | 274, 991, 1015, 1081, 1132 |
| LweI | GCATC | 3 cut(s) | 127, 321, 575 |
| MabI | ACCWGGT | 1 cut(s) | 826 |
| MaeIII | GTNAC | 2 cut(s) | 418, 458 |
| MalI | GATC | 3 cut(s) | 638, 744, 932 |
| MboI | GATC | 3 cut(s) | 636, 742, 930 |
| MboII | GAAGA | 6 cut(s) | 16, 223, 248, 390, 772, 1011 |
| MfeI | CAATTG | 2 cut(s) | 158, 938 |
| MflI | RGATCY | 1 cut(s) | 742 |
| MhlI | GDGCHC | 2 cut(s) | 1139, 1165 |
| MlsI | TGGCCA | 1 cut(s) | 368 |
| MluNI | TGGCCA | 1 cut(s) | 368 |
| MlyI | GAGTC | 2 cut(s) | 115, 725 |
| MmeI | TCCRAC | 3 cut(s) | 408, 825, 1168 |
| Mox20I | TGGCCA | 1 cut(s) | 368 |
| MscI | TGGCCA | 1 cut(s) | 368 |
| MseI | TTAA | 5 cut(s) | 192, 560, 768, 879, 1209 |
| MslI | CAYNNNNRTG | 1 cut(s) | 15 |
| Msp20I | TGGCCA | 1 cut(s) | 368 |
| MspI | CCGG | 1 cut(s) | 522 |
| MspR9I | CCNGG | 4 cut(s) | 523, 828, 895, 1092 |
| MunI | CAATTG | 2 cut(s) | 158, 938 |
| Mva1269I | GAATGC | 1 cut(s) | 1189 |
| MvaI | CCWGG | 3 cut(s) | 828, 895, 1092 |
| MvnI | CGCG | 1 cut(s) | 175 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 137, 532, 541, 550, 754, 976 |
| NciI | CCSGG | 1 cut(s) | 523 |
| NdeII | GATC | 3 cut(s) | 636, 742, 930 |
| NlaIII | CATG | 6 cut(s) | 649, 778, 920, 1057, 1183, 1216 |
| NlaIV | GGNNCC | 4 cut(s) | 155, 964, 1102, 1128 |
| NmuCI | GTSAC | 1 cut(s) | 418 |
| NspI | RCATGY | 1 cut(s) | 1216 |
| PagI | TCATGA | 2 cut(s) | 645, 916 |
| PaqCI | CACCTGC | 2 cut(s) | 154, 478 |
| PciI | ACATGT | 1 cut(s) | 1212 |
| PctI | GAATGC | 1 cut(s) | 1189 |
| PfeI | GAWTC | 4 cut(s) | 7, 20, 170, 575 |
| PflFI | GACNNNGTC | 1 cut(s) | 349 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 473 |
| PfoI | TCCNGGA | 1 cut(s) | 1090 |
| PkrI | GCNGC | 6 cut(s) | 177, 289, 981, 1005, 1071, 1122 |
| PleI | GAGTC | 2 cut(s) | 114, 724 |
| PpsI | GAGTC | 2 cut(s) | 114, 724 |
| PscI | ACATGT | 1 cut(s) | 1212 |
| PshBI | ATTAAT | 2 cut(s) | 560, 879 |
| Psp6I | CCWGG | 3 cut(s) | 826, 893, 1090 |
| PspFI | CCCAGC | 1 cut(s) | 392 |
| PspGI | CCWGG | 3 cut(s) | 826, 893, 1090 |
| PspN4I | GGNNCC | 4 cut(s) | 155, 964, 1102, 1128 |
| PspPI | GGNCC | 1 cut(s) | 524 |
| PstI | CTGCAG | 1 cut(s) | 1122 |
| PsuI | RGATCY | 1 cut(s) | 742 |
| PsyI | GACNNNGTC | 1 cut(s) | 349 |
| RsaI | GTAC | 4 cut(s) | 78, 659, 683, 713 |
| RsaNI | GTAC | 4 cut(s) | 77, 658, 682, 712 |
| RseI | CAYNNNNRTG | 1 cut(s) | 15 |
| SaqAI | TTAA | 5 cut(s) | 192, 560, 768, 879, 1209 |
| SatI | GCNGC | 6 cut(s) | 176, 288, 980, 1004, 1070, 1121 |
| Sau3AI | GATC | 3 cut(s) | 636, 742, 930 |
| Sau96I | GGNCC | 1 cut(s) | 524 |
| SchI | GAGTC | 2 cut(s) | 115, 725 |
| ScrFI | CCNGG | 4 cut(s) | 523, 828, 895, 1092 |
| SduI | GDGCHC | 2 cut(s) | 1139, 1165 |
| SexAI | ACCWGGT | 1 cut(s) | 826 |
| SfaNI | GCATC | 3 cut(s) | 127, 321, 575 |
| SfcI | CTRYAG | 1 cut(s) | 1118 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 15 |
| SmlI | CTYRAG | 5 cut(s) | 114, 245, 414, 749, 903 |
| SmoI | CTYRAG | 5 cut(s) | 114, 245, 414, 749, 903 |
| SsiI | CCGC | 3 cut(s) | 175, 746, 1104 |
| SspI | AATATT | 3 cut(s) | 47, 540, 1084 |
| StyD4I | CCNGG | 4 cut(s) | 521, 826, 893, 1090 |
| TaaI | ACNGT | 2 cut(s) | 583, 796 |
| TaqI | TCGA | 2 cut(s) | 314, 1063 |
| TatI | WGTACW | 2 cut(s) | 76, 657 |
| TauI | GCSGC | 1 cut(s) | 178 |
| TfiI | GAWTC | 4 cut(s) | 7, 20, 170, 575 |
| Tru1I | TTAA | 5 cut(s) | 192, 560, 768, 879, 1209 |
| Tru9I | TTAA | 5 cut(s) | 192, 560, 768, 879, 1209 |
| TscAI | CASTG | 3 cut(s) | 1113, 1122, 1165 |
| TseFI | GTSAC | 1 cut(s) | 418 |
| TseI | GCWGC | 5 cut(s) | 287, 979, 1003, 1069, 1120 |
| Tsp45I | GTSAC | 1 cut(s) | 418 |
| TspDTI | ATGAA | 7 cut(s) | 17, 33, 255, 662, 695, 933, 1196 |
| TspGWI | ACGGA | 1 cut(s) | 955 |
| TspRI | CASTG | 3 cut(s) | 1113, 1122, 1165 |
| Tth111I | GACNNNGTC | 1 cut(s) | 349 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 473 |
| VspI | ATTAAT | 2 cut(s) | 560, 879 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 114 |
| XapI | RAATTY | 5 cut(s) | 318, 484, 804, 871, 1009 |
| XceI | RCATGY | 1 cut(s) | 1216 |