Rorug05G0442500

Mediator of RNA polymerase II transcription subunit 15a-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000315
Physical Location & Seq
Reverse (-)
61454089 .. 61455513
1425 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0442500.1

Sequence Viewer

Length: 1386 bp
ATGGCGCAGATTAGGGCTATGGCTGCTCGTAACCCCTCCGACTCTGCAAGGGTCACGCTGGGAGCGGCGGGAGCGGCGGCGCTGCAGGATACTCACTGGTATATGGTTGGGCGCCTACTCGGGAACAAGACTCGATTCCTTGGTTTCAAAGGGACTATAACTTCGATCTGGCGTGTGAAATCCGGTCTCTCCGTCCAGGATGCCGGAGATCGTTTTCTTTTTCAATTTGATCACGAAGTTGATCGCAATAGGGCTCTACGTGGCGGGCTGTGGTTTTACAGGAATACGATATTGTTGCTTGGAGACTATGATGGGATTGGTTCGGTGGAGACAATCCCGCTGTGGAAGTTGGAGACTTGGGTGGTGGTGAAGGGACTGCCAGTAGCCCTTCGTAACAAAGCAGCCCTAACCCCGATAGGGTCTGCGATTGGCCAGGTCATTAGATTTGATCAGTCAGCACTCCGATGGAAGGAGGAGGAACAAAGGATCCGGCTGGTGATGGATGTTCGGCGTGGGGTCCGTAGCTGGATGCTTTTCGAGTTCTCGCCTACAGGCTTTTGTCGTGAGTGTGGTCTATTTGAGCATAGTGAATCGGGCTGCGATGGATTCCTGGTGGCTGAGAAAACGAAGTTTCAACAAGGGCCGCCGGCAACAGCTATAGCAGGATTGTCGTTGGCTATGGGTGATCTGTCTCTCGGAGATGCTAGTGATCCAACAAAAGAACAACAGCTGCCTTCTGATGTATCTGGAGTGGGAATGGAGATGGTGCTGCAGCAAGTGGACTCTGGTGTTGATGGGCCGGGTTCCAGGATTCCTGGAGGGGTGGTAGCCCATGCGTCATTAGGAGAGGATAGGTCGTCTAGACCTAAACAGGGTGAAGATGTTATTGGTACGTCGCACGGTATGATAGATCATGGGGACGTAGAATGGATCAAGAATTGGAAGACTTTGGTTCCGGACTGCTCTTTGACCAAAGTGGTGCCAATGTCGGGTTTCACTAAGGTGAAGAAAGCAATTCTGAACCCGGAGTCGGATGTGGGATCGTCTTGTTTGGCTCTGGTGGGGACAAAACGAAGAGCGAGTGTTGATCTGATTATGGTAGGTAAGCGTCTGTTGTCACCGGCTCATCCTGCTCTTAAGGTGGATGAGAACATGACTCTAATGTTGCAGCATAAAAATGGCAAGATTATCATTTCTCCTAGGAAGAAGAAATTGGGACGCCCTTGTGGGAGTAAGAATAAACCTAAGGCTGCTAGGGTTTTGGAGCTGGAGCTACAAGAGAGGAAACAACCAAATGGAAGAGCCATATTGATTCCCAAGGTGAGTCTGCGGATTGTTTGCCTACGTAGACTACTTCTCCTGCAGTTGATGGAGGGGACAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KIX_2

Protein Analysis

461

Amino Acids

50.55

Weight (kDa)

9.7

Isoelectric Point (pI)

43.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 31 - 100 1.5e-08 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000315)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15790 AT1G15790 AT1G15790 AT1G15790 AT1G15790
fragaria_vesca FvH4_3g12350 FvH4_3g37483 FvH4_3g42320 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42361
malus_domestica MD03G1031600.v1.1 MD03G1031700.v1.1 MD03G1033500.v1.1 MD07G1261500.v1.1 MD11G1035800.v1.1
prunus_persica Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1
pyrus_communis pycom03g02570 pycom03g02580
rosa_chinensis RchiOBHm_Chr4g0419101 RchiOBHm_Chr5g0075711 RchiOBHm_Chr5g0075731 RchiOBHm_Chr5g0075781 RchiOBHm_Chr5g0075801 RchiOBHm_Chr5g0075811 RchiOBHm_Chr5g0075831 RchiOBHm_Chr5g0075841 RchiOBHm_Chr5g0075851 RchiOBHm_Chr5g0075861
rosa_laevigata RLG00000029834 RLG00000036588 RLG00000036591 RLG00000036592 RLG00000036594 RLG00000036595 RLG00000036597 RLG00000036647
rosa_multiflora Rmu_co8127406.1_g000001 Rmu_co8138284.1_g000001 Rmu_sc0002101.1_g000001 Rmu_sc0002101.1_g000006 Rmu_sc0002652.1_g000027 Rmu_sc0002652.1_g000029 Rmu_sc0008562.1_g000002 Rmu_sc0019599.1_g000001 Rmu_sc0019861.1_g000005 Rmu_sc0029317.1_g000001 Rmu_sc0031378.1_g000001 Rmu_ssc0000402.1_g000001
rosa_roxburghii Rroxscaffold_1G00005820 Rroxscaffold_1G00005830 Rroxscaffold_1G00005840 Rroxscaffold_1G00005850 Rroxscaffold_1G00005860 Rroxscaffold_1G00005870 Rroxscaffold_1G00005890 Rroxscaffold_5G00340930 Rroxscaffold_5G00343250 Rroxscaffold_5G00369260
rosa_rugosa Rorug05G0442200 Rorug05G0442300.1 Rorug05G0442400 Rorug05G0442500 Rorug05G0442600 Rorug05G0442700 Rorug05G0442900
rosa_samantha Rh1AG189900 Rh2DG257500 Rh5AG498900 Rh5AG499100 Rh5AG499400 Rh5AG499500 Rh5AG499600 Rh5AG499700 Rh5AG499900 Rh5AG506800 Rh5BG519900 Rh5BG520100 Rh5BG520400 Rh5BG520500 Rh5BG520600 Rh5BG520800 Rh5BG520900 Rh5BG521100 Rh5CG543900 Rh5CG544100 Rh5CG544400 Rh5CG544500 Rh5CG544600 Rh5CG544800 Rh5CG544900 Rh5CG545000 Rh5CG545200 Rh5DG532700 Rh5DG533100 Rh5DG533200 Rh5DG533400 Rh5DG533500 Rh5DG533600 Rh5DG533700
rosa_wichuraiana Rw5G046310 Rw5G046340 Rw5G046350 Rw5G046360 Rw5G046370 Rw5G046380 Rw5G046400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 111, 979
AccBSI CCGCTC 2 cut(s) 65, 74
AccI GTMKAC 1 cut(s) 1348
AccIII TCCGGA 1 cut(s) 955
AciI CCGC 8 cut(s) 65, 68, 74, 77, 264, 338, 644, 1330
AclWI GGATC 5 cut(s) 481, 494, 704, 938, 1048
AcoI YGGCCR 1 cut(s) 430
AcyI GRCGYC 2 cut(s) 112, 1219
AfaI GTAC 1 cut(s) 892
AfiI CCNNNNNNNGG 5 cut(s) 417, 469, 872, 989, 1030
AflII CTTAAG 1 cut(s) 1136
AgsI TTSAA 3 cut(s) 148, 224, 635
AjnI CCWGG 5 cut(s) 195, 432, 609, 806, 814
AjuI GAANNNNNNNTTGG 4 cut(s) 870, 902, 1196, 1228
AleI CACNNNNGTG 1 cut(s) 1001
AloI GAACNNNNNNTCC 2 cut(s) 471, 503
AluBI AGCT 5 cut(s) 525, 656, 730, 1267, 1273
AluI AGCT 5 cut(s) 525, 656, 730, 1267, 1273
Alw26I GTCTC 5 cut(s) 191, 297, 323, 347, 696
AlwI GGATC 5 cut(s) 481, 494, 704, 938, 1048
Ama87I CYCGRG 1 cut(s) 119
Aor13HI TCCGGA 1 cut(s) 955
AoxI GGCC 3 cut(s) 430, 641, 797
ApeKI GCWGC 9 cut(s) 23, 82, 401, 597, 730, 769, 772, 1168, 1250
ArsI GACNNNNNNTTYG 2 cut(s) 145, 177
AspA2I CCTAGG 1 cut(s) 1199
AspLEI GCGC 3 cut(s) 7, 82, 114
AspS9I GGNCC 3 cut(s) 517, 641, 797
AsuC2I CCSGG 2 cut(s) 801, 1025
AsuHPI GGTGA 7 cut(s) 379, 508, 695, 887, 1015, 1110, 1333
AvaI CYCGRG 1 cut(s) 119
AvaII GGWCC 1 cut(s) 517
AvrII CCTAGG 1 cut(s) 1199
AxyI CCTNAGG 1 cut(s) 1245
BalI TGGCCA 1 cut(s) 432
BamHI GGATCC 1 cut(s) 486
BanI GGYRCC 2 cut(s) 111, 979
BanII GRGCYC 1 cut(s) 256
BbsI GAAGAC 1 cut(s) 950
BbvI GCAGC 9 cut(s) 10, 69, 413, 584, 717, 756, 784, 1180, 1237
BccI CCATC 7 cut(s) 305, 459, 493, 596, 757, 788, 1363
BcgI CGANNNNNNTGC 4 cut(s) 277, 311, 651, 685
BciT130I CCWGG 5 cut(s) 197, 434, 611, 808, 816
BciVI GTATCC 1 cut(s) 82
BclI TGATCA 2 cut(s) 229, 448
BcnI CCSGG 2 cut(s) 801, 1025
BcoDI GTCTC 5 cut(s) 191, 297, 323, 347, 696
BfaI CTAG 4 cut(s) 705, 861, 1200, 1254
BfmI CTRYAG 5 cut(s) 83, 549, 657, 770, 1361
BfoI RGCGCY 2 cut(s) 83, 115
BfrI CTTAAG 1 cut(s) 1136
BfuI GTATCC 1 cut(s) 82
BlnI CCTAGG 1 cut(s) 1199
Bme1390I CCNGG 7 cut(s) 197, 434, 611, 801, 808, 816, 1025
Bme18I GGWCC 1 cut(s) 517
BmeT110I CYCGRG 1 cut(s) 119
BmgT120I GGNCC 3 cut(s) 517, 641, 797
BmiI GGNNCC 6 cut(s) 113, 488, 518, 805, 954, 981
BmrFI CCNGG 7 cut(s) 197, 434, 611, 801, 808, 816, 1025
BmsI GCATC 3 cut(s) 190, 519, 691
BpiI GAAGAC 1 cut(s) 950
BpmI CTGGAG 3 cut(s) 768, 837, 1289
BpuMI CCSGG 2 cut(s) 801, 1025
BsaAI YACGTR 2 cut(s) 260, 1346
BsaHI GRCGYC 2 cut(s) 112, 1219
BsaI GGTCTC 1 cut(s) 191
BsaJI CCNNGG 3 cut(s) 139, 1199, 1317
BsaWI WCCGGW 2 cut(s) 182, 955
BsaXI ACNNNNNCTCC 4 cut(s) 810, 840, 1341, 1371
Bsc4I CCNNNNNNNGG 5 cut(s) 417, 469, 872, 989, 1030
Bse118I RCCGGY 2 cut(s) 646, 1120
Bse1I ACTGG 2 cut(s) 101, 380
Bse21I CCTNAGG 1 cut(s) 1245
BseAI TCCGGA 1 cut(s) 955
BseBI CCWGG 5 cut(s) 197, 434, 611, 808, 816
BseDI CCNNGG 3 cut(s) 139, 1199, 1317
BseGI GGATG 6 cut(s) 205, 508, 534, 1039, 1126, 1150
BseLI CCNNNNNNNGG 5 cut(s) 417, 469, 872, 989, 1030
BseMII CTCAG 1 cut(s) 609
BseNI ACTGG 2 cut(s) 101, 380
BseRI GAGGAG 1 cut(s) 488
BseXI GCAGC 9 cut(s) 10, 69, 413, 584, 717, 756, 784, 1180, 1237
BseYI CCCAGC 1 cut(s) 58
BshFI GGCC 3 cut(s) 432, 643, 799
BshNI GGYRCC 2 cut(s) 111, 979
BsiHKCI CYCGRG 1 cut(s) 119
BsiSI CCGG 8 cut(s) 183, 204, 490, 647, 800, 956, 1025, 1121
BslFI GGGAC 5 cut(s) 166, 387, 932, 1078, 1230
BslI CCNNNNNNNGG 5 cut(s) 417, 469, 872, 989, 1030
BsmAI GTCTC 5 cut(s) 191, 297, 323, 347, 696
BsmFI GGGAC 5 cut(s) 166, 387, 932, 1078, 1230
BsnI GGCC 3 cut(s) 432, 643, 799
Bso31I GGTCTC 1 cut(s) 191
BsoBI CYCGRG 1 cut(s) 119
Bsp1286I GDGCHC 1 cut(s) 256
Bsp13I TCCGGA 1 cut(s) 955
BspACI CCGC 8 cut(s) 65, 68, 74, 77, 264, 338, 644, 1330
BspANI GGCC 3 cut(s) 432, 643, 799
BspCNI CTCAG 1 cut(s) 610
BspEI TCCGGA 1 cut(s) 955
BspLI GGNNCC 6 cut(s) 113, 488, 518, 805, 954, 981
BspMAI CTGCAG 3 cut(s) 87, 774, 1365
BspPI GGATC 5 cut(s) 481, 494, 704, 938, 1048
BspQI GCTCTTC 2 cut(s) 1069, 1294
BspT107I GGYRCC 2 cut(s) 111, 979
BspTI CTTAAG 1 cut(s) 1136
BspTNI GGTCTC 1 cut(s) 191
BsrBI CCGCTC 2 cut(s) 65, 74
BsrFI RCCGGY 2 cut(s) 646, 1120
BsrI ACTGG 2 cut(s) 101, 380
BssAI RCCGGY 2 cut(s) 646, 1120
BssECI CCNNGG 3 cut(s) 139, 1199, 1317
BssNI GRCGYC 2 cut(s) 112, 1219
BssT1I CCWWGG 3 cut(s) 139, 1199, 1317
Bst2UI CCWGG 5 cut(s) 197, 434, 611, 808, 816
Bst4CI ACNGT 1 cut(s) 902
Bst6I CTCTTC 2 cut(s) 1069, 1294
BstACI GRCGYC 2 cut(s) 112, 1219
BstAFI CTTAAG 1 cut(s) 1136
BstBAI YACGTR 2 cut(s) 260, 1346
BstC8I GCNNGC 2 cut(s) 266, 648
BstDEI CTNAG 3 cut(s) 618, 999, 1245
BstF5I GGATG 6 cut(s) 205, 508, 534, 1039, 1126, 1150
BstH2I RGCGCY 2 cut(s) 83, 115
BstHHI GCGC 3 cut(s) 7, 82, 114
BstMAI GTCTC 5 cut(s) 191, 297, 323, 347, 696
BstMWI GCNNNNNNNGC 4 cut(s) 23, 71, 74, 1130
BstNI CCWGG 5 cut(s) 197, 434, 611, 808, 816
BstSCI CCNGG 7 cut(s) 195, 432, 609, 799, 806, 814, 1023
BstSFI CTRYAG 5 cut(s) 83, 549, 657, 770, 1361
BstSNI TACGTA 1 cut(s) 1346
BstV1I GCAGC 9 cut(s) 10, 69, 413, 584, 717, 756, 784, 1180, 1237
BstV2I GAAGAC 1 cut(s) 950
BstX2I RGATCY 1 cut(s) 486
BstYI RGATCY 1 cut(s) 486
Bsu36I CCTNAGG 1 cut(s) 1245
BsuI GTATCC 1 cut(s) 82
BsuRI GGCC 3 cut(s) 432, 643, 799
BtgZI GCGATG 1 cut(s) 615
BtsCI GGATG 6 cut(s) 205, 508, 534, 1039, 1126, 1150
BtsIMutI CAGTG 1 cut(s) 94
Cac8I GCNNGC 2 cut(s) 266, 648
CfoI GCGC 3 cut(s) 7, 82, 114
Cfr10I RCCGGY 2 cut(s) 646, 1120
Cfr13I GGNCC 3 cut(s) 517, 641, 797
CseI GACGC 3 cut(s) 825, 1097, 1227
Csp6I GTAC 1 cut(s) 891
CviAII CATG 3 cut(s) 833, 914, 1153
CviQI GTAC 1 cut(s) 891
DdeI CTNAG 3 cut(s) 618, 999, 1245
DinI GGCGCC 1 cut(s) 113
EaeI YGGCCR 1 cut(s) 430
Eam1104I CTCTTC 2 cut(s) 1069, 1294
EarI CTCTTC 2 cut(s) 1069, 1294
Eco105I TACGTA 1 cut(s) 1346
Eco130I CCWWGG 3 cut(s) 139, 1199, 1317
Eco24I GRGCYC 1 cut(s) 256
Eco31I GGTCTC 1 cut(s) 191
Eco47I GGWCC 1 cut(s) 517
Eco81I CCTNAGG 1 cut(s) 1245
Eco88I CYCGRG 1 cut(s) 119
EcoRII CCWGG 5 cut(s) 195, 432, 609, 806, 814
EcoT14I CCWWGG 3 cut(s) 139, 1199, 1317
EcoT38I GRGCYC 1 cut(s) 256
EgeI GGCGCC 1 cut(s) 113
EheI GGCGCC 1 cut(s) 113
ErhI CCWWGG 3 cut(s) 139, 1199, 1317
FaeI CATG 3 cut(s) 836, 917, 1156
FaqI GGGAC 5 cut(s) 166, 387, 932, 1078, 1230
FatI CATG 3 cut(s) 832, 913, 1152
FauI CCCGC 3 cut(s) 61, 257, 345
FbaI TGATCA 2 cut(s) 229, 448
FblI GTMKAC 1 cut(s) 1348
FokI GGATG 6 cut(s) 212, 515, 541, 1046, 1113, 1157
FriOI GRGCYC 1 cut(s) 256
FspBI CTAG 4 cut(s) 705, 861, 1200, 1254
GlaI GCGC 3 cut(s) 6, 81, 113
GsaI CCCAGC 1 cut(s) 62
GsuI CTGGAG 3 cut(s) 768, 837, 1289
HaeII RGCGCY 2 cut(s) 83, 115
HaeIII GGCC 3 cut(s) 432, 643, 799
HapII CCGG 8 cut(s) 183, 204, 490, 647, 800, 956, 1025, 1121
HgaI GACGC 3 cut(s) 825, 1097, 1227
HhaI GCGC 3 cut(s) 7, 82, 114
Hin1I GRCGYC 2 cut(s) 112, 1219
Hin1II CATG 3 cut(s) 836, 917, 1156
Hin6I GCGC 3 cut(s) 5, 80, 112
HinP1I GCGC 3 cut(s) 5, 80, 112
HpaII CCGG 8 cut(s) 183, 204, 490, 647, 800, 956, 1025, 1121
HphI GGTGA 7 cut(s) 379, 508, 695, 887, 1015, 1110, 1333
Hpy166II GTNNAC 2 cut(s) 781, 1349
Hpy188I TCNGA 7 cut(s) 40, 464, 698, 739, 1020, 1033, 1092
Hpy188III TCNNGA 7 cut(s) 121, 233, 563, 747, 861, 934, 956
Hpy8I GTNNAC 2 cut(s) 781, 1349
Hpy99I CGWCG 1 cut(s) 898
HpyAV CCTTC 4 cut(s) 364, 398, 463, 744
HpyCH4III ACNGT 1 cut(s) 902
HpyCH4IV ACGT 4 cut(s) 259, 893, 921, 1345
HpyCH4V TGCA 5 cut(s) 47, 85, 772, 1168, 1363
HpyF10VI GCNNNNNNNGC 4 cut(s) 23, 71, 74, 1130
HpyF3I CTNAG 3 cut(s) 618, 999, 1245
HpySE526I ACGT 4 cut(s) 259, 893, 921, 1345
Hsp92I GRCGYC 2 cut(s) 112, 1219
Hsp92II CATG 3 cut(s) 836, 917, 1156
HspAI GCGC 3 cut(s) 5, 80, 112
KasI GGCGCC 1 cut(s) 111
Kpn2I TCCGGA 1 cut(s) 955
KroI GCCGGC 1 cut(s) 646
KroNI GCCGGC 1 cut(s) 648
Ksp22I TGATCA 2 cut(s) 229, 448
LguI GCTCTTC 2 cut(s) 1069, 1294
LmnI GCTCC 4 cut(s) 62, 71, 1264, 1270
Lsp1109I GCAGC 9 cut(s) 10, 69, 413, 584, 717, 756, 784, 1180, 1237
LweI GCATC 3 cut(s) 190, 519, 691
MaeI CTAG 4 cut(s) 705, 861, 1200, 1254
MaeII ACGT 4 cut(s) 259, 893, 921, 1345
MaeIII GTNAC 4 cut(s) 29, 52, 392, 1116
MbiI CCGCTC 2 cut(s) 65, 74
MboII GAAGA 7 cut(s) 890, 955, 1018, 1086, 1216, 1219, 1311
MflI RGATCY 1 cut(s) 486
MhlI GDGCHC 1 cut(s) 256
MlsI TGGCCA 1 cut(s) 432
MluCI AATT 4 cut(s) 224, 937, 1014, 1211
MluNI TGGCCA 1 cut(s) 432
Mly113I GGCGCC 1 cut(s) 112
MlyI GAGTC 6 cut(s) 35, 124, 776, 1037, 1150, 1333
MmeI TCCRAC 4 cut(s) 63, 330, 737, 1011
MnlI CCTC 7 cut(s) 46, 466, 469, 812, 841, 1275, 1366
Mox20I TGGCCA 1 cut(s) 432
MroI TCCGGA 1 cut(s) 955
MroNI GCCGGC 1 cut(s) 646
MscI TGGCCA 1 cut(s) 432
MseI TTAA 1 cut(s) 1137
MslI CAYNNNNRTG 3 cut(s) 463, 1001, 1176
Msp20I TGGCCA 1 cut(s) 432
MspA1I CMGCKG 2 cut(s) 340, 730
MspCI CTTAAG 1 cut(s) 1136
MspI CCGG 8 cut(s) 183, 204, 490, 647, 800, 956, 1025, 1121
MspR9I CCNGG 7 cut(s) 197, 434, 611, 801, 808, 816, 1025
MvaI CCWGG 5 cut(s) 197, 434, 611, 808, 816
MwoI GCNNNNNNNGC 4 cut(s) 23, 71, 74, 1130
NaeI GCCGGC 1 cut(s) 648
NarI GGCGCC 1 cut(s) 112
NciI CCSGG 2 cut(s) 801, 1025
NgoMIV GCCGGC 1 cut(s) 646
NlaIII CATG 3 cut(s) 836, 917, 1156
NlaIV GGNNCC 6 cut(s) 113, 488, 518, 805, 954, 981
NmuCI GTSAC 2 cut(s) 52, 1116
OliI CACNNNNGTG 1 cut(s) 1001
PciSI GCTCTTC 2 cut(s) 1069, 1294
PdiI GCCGGC 1 cut(s) 648
PfeI GAWTC 5 cut(s) 135, 590, 606, 811, 1312
PfoI TCCNGGA 3 cut(s) 195, 806, 814
PleI GAGTC 6 cut(s) 35, 124, 776, 1036, 1150, 1332
PluTI GGCGCC 1 cut(s) 115
PpsI GAGTC 6 cut(s) 35, 124, 776, 1036, 1150, 1332
Ppu21I YACGTR 2 cut(s) 260, 1346
Psp6I CCWGG 5 cut(s) 195, 432, 609, 806, 814
PspFI CCCAGC 1 cut(s) 58
PspGI CCWGG 5 cut(s) 195, 432, 609, 806, 814
PspN4I GGNNCC 6 cut(s) 113, 488, 518, 805, 954, 981
PspPI GGNCC 3 cut(s) 517, 641, 797
PstI CTGCAG 3 cut(s) 87, 774, 1365
PsuI RGATCY 1 cut(s) 486
PvuII CAGCTG 1 cut(s) 730
RsaI GTAC 1 cut(s) 892
RsaNI GTAC 1 cut(s) 891
RseI CAYNNNNRTG 3 cut(s) 463, 1001, 1176
SapI GCTCTTC 2 cut(s) 1069, 1294
SaqAI TTAA 1 cut(s) 1137
Sau96I GGNCC 3 cut(s) 517, 641, 797
SchI GAGTC 6 cut(s) 35, 124, 776, 1037, 1150, 1333
ScrFI CCNGG 7 cut(s) 197, 434, 611, 801, 808, 816, 1025
SduI GDGCHC 1 cut(s) 256
SfaNI GCATC 3 cut(s) 190, 519, 691
SfcI CTRYAG 5 cut(s) 83, 549, 657, 770, 1361
SfoI GGCGCC 1 cut(s) 113
SinI GGWCC 1 cut(s) 517
SmiMI CAYNNNNRTG 3 cut(s) 463, 1001, 1176
SmlI CTYRAG 1 cut(s) 1136
SmoI CTYRAG 1 cut(s) 1136
SnaBI TACGTA 1 cut(s) 1346
Sse9I AATT 4 cut(s) 224, 937, 1014, 1211
SsiI CCGC 8 cut(s) 65, 68, 74, 77, 264, 338, 644, 1330
SspDI GGCGCC 1 cut(s) 111
SspMI CTAG 4 cut(s) 705, 861, 1200, 1254
StyD4I CCNGG 7 cut(s) 195, 432, 609, 799, 806, 814, 1023
StyI CCWWGG 3 cut(s) 139, 1199, 1317
TaaI ACNGT 1 cut(s) 902
TaiI ACGT 4 cut(s) 262, 896, 924, 1348
TaqI TCGA 3 cut(s) 133, 164, 537
TasI AATT 4 cut(s) 224, 937, 1014, 1211
TauI GCSGC 4 cut(s) 68, 77, 80, 646
TfiI GAWTC 5 cut(s) 135, 590, 606, 811, 1312
Tru1I TTAA 1 cut(s) 1137
Tru9I TTAA 1 cut(s) 1137
TscAI CASTG 1 cut(s) 101
TseFI GTSAC 2 cut(s) 52, 1116
TseI GCWGC 9 cut(s) 23, 82, 401, 597, 730, 769, 772, 1168, 1250
Tsp45I GTSAC 2 cut(s) 52, 1116
TspGWI ACGGA 2 cut(s) 181, 509
TspRI CASTG 1 cut(s) 101
Vha464I CTTAAG 1 cut(s) 1136
VpaK11BI GGWCC 1 cut(s) 517
XbaI TCTAGA 1 cut(s) 860
XmaJI CCTAGG 1 cut(s) 1199
XmiI GTMKAC 1 cut(s) 1348
XspI CTAG 4 cut(s) 705, 861, 1200, 1254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.