Rh5DG533500

Mediator of RNA polymerase II transcription subunit 15a-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000315
Physical Location & Seq
Forward (+)
82213188 .. 82216242
3055 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG533500.1

Sequence Viewer

Length: 1785 bp
ATGGATAACAACAATGGGAGTCCTCCTCAAGGTGGAGAGCCTGCAATGGATGCAGGAGATTGGAGGTGCCAATTGCAGGCGGATTCGCGGCAAAGAATTGTCAATAAGATAATGGATACATTGAAGAGGCATATTCCTTACTCCAGTGAAGATGAACTCAAGAAAATTGCTGTTAGGTTTGAGGAAAAGATTTATGTTGCTGCCCCAAGTCAGTCAGATTATCTATCGAAAATTTCTCTAAAGATGCTCTCTATGGAGACCAAGTCTCAGAACACAATGGCCAATTCTTTACAATCCAACTCTGCTGGGTCTTCTGGTATGCAACCTCAAGTCACCAGTCAAGGACAACTCTTATCAGAGAACATTCAAAGTAACATTCCACCTGCTGGAGTTCAAAATTCTGCTGGCTTATCATCTGCACTACCTCCTACCTCCGGGCCACAAGAGCAAATATTGCCCCCACAGCATCAACCGCAACAATTAATAGCATCTTTGGATTCCACATTCCAGACTGGGAATACAAATGGAGCTGATTGGCAAGAGGAGGGCTATCAAAAGATCAAAGTCATGAAGGAGATGTACTACCCCGAACTAAGTGAAATGTACCAAAAACTTGCTACTAAACTTCATCAGCACGACTCCCTTCCACAACAGCCAAAGTCAGATCAGCTTGAGAAGCTGAAGATGTTTAAGACCATGCTGGAGCGCCTGATAACAGTCTTACAAATATCCAAAAGTAACATATCACCTAGTTTGAAGGAGAAGTTGGGTTTATACGAGAAGCAGATGATAAATTTTATTAATACAAATAGACCCAGGAAGCCTGTTTCTTCTCTGCAGCCAGAGCAGCTCCCCCCACCGCATATGCAGTCCATGCAGCAGTCACAATCCCAGATTACTCAAGTGCAATCTCATGAAAATCAGATGAACCCACAATTGCAATCCCTGAACTTGCAAGGTTCTGTGCCAACAATGCAGCAGAACAATATGACGGGCTTGCAGCAAAATTCTATGTCTTCTTTATCCGGGGTTTCAACAGCACAGCAAAACATGATGAATCCGTTGCAGCCAAGTTCCAATATGGATCCAGGACAAGGAACCGCACTGAACTCACTGCAGCAGGTCCCTGTGGGCTCTATCCAACAGACCCCTGTCAGTGCTCCCCAACAAGCTAACATGAACGCCTTATCATCACAGAACGGGATTAACATGCTGCAGAGCAACATTAATCCCCTTCAGTCAAATTCTGGTATGCTTCATAGCCAACATCTGAAACAGCAGGGACAGCAATTGTATCAGAATCAACTCAAGCAACAATATCAACAACGACAGATGCAGCAGCAGCAGTTGATGCAGAAGCTGCAGATATTTCAACAACAACAACAGCAAGAGCTACAGCAGCTGCTGCCTGGACAGTTGGAACCCCAGCTTCACCAAATCAGTGTTGTTAATGACATGAACATGAATCACTTGTCATCATCAAAGAGTGGGAGTAATATGCTGCAGGAAAGCACTGATTCCCTCAAGTCAAACTCTGGTATGCTTGATAACCAGCGTCAGAAGCAAGAAACTTCCTCTGTGAACCTCAAGCAACTGTATCAACAGCTACAGATGCAGCAGCAATGGATGCAGAAACTGCAGATGCTTCAAGAAAAGCAACAGCAGCAGATACGGCAACTACAGCAGCAAGCAAAGCAGCGCCTGCATTTTATTTATTTCATCTGTCTCATCTTTCTCATCATTCTATTCGGTGCTGCTCTTTTCGGGGAAGGCTATTGGATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KIX_2

Protein Analysis

594

Amino Acids

67.16

Weight (kDa)

8.74

Isoelectric Point (pI)

67.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIX_2 PF16987 19 - 95 7e-29 KIX domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000315)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15790 AT1G15790 AT1G15790 AT1G15790 AT1G15790
fragaria_vesca FvH4_3g12350 FvH4_3g37483 FvH4_3g42320 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42361
malus_domestica MD03G1031600.v1.1 MD03G1031700.v1.1 MD03G1033500.v1.1 MD07G1261500.v1.1 MD11G1035800.v1.1
prunus_persica Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1
pyrus_communis pycom03g02570 pycom03g02580
rosa_chinensis RchiOBHm_Chr4g0419101 RchiOBHm_Chr5g0075711 RchiOBHm_Chr5g0075731 RchiOBHm_Chr5g0075781 RchiOBHm_Chr5g0075801 RchiOBHm_Chr5g0075811 RchiOBHm_Chr5g0075831 RchiOBHm_Chr5g0075841 RchiOBHm_Chr5g0075851 RchiOBHm_Chr5g0075861
rosa_laevigata RLG00000029834 RLG00000036588 RLG00000036591 RLG00000036592 RLG00000036594 RLG00000036595 RLG00000036597 RLG00000036647
rosa_multiflora Rmu_co8127406.1_g000001 Rmu_co8138284.1_g000001 Rmu_sc0002101.1_g000001 Rmu_sc0002101.1_g000006 Rmu_sc0002652.1_g000027 Rmu_sc0002652.1_g000029 Rmu_sc0008562.1_g000002 Rmu_sc0019599.1_g000001 Rmu_sc0019861.1_g000005 Rmu_sc0029317.1_g000001 Rmu_sc0031378.1_g000001 Rmu_ssc0000402.1_g000001
rosa_roxburghii Rroxscaffold_1G00005820 Rroxscaffold_1G00005830 Rroxscaffold_1G00005840 Rroxscaffold_1G00005850 Rroxscaffold_1G00005860 Rroxscaffold_1G00005870 Rroxscaffold_1G00005890 Rroxscaffold_5G00340930 Rroxscaffold_5G00343250 Rroxscaffold_5G00369260
rosa_rugosa Rorug05G0442200 Rorug05G0442300.1 Rorug05G0442400 Rorug05G0442500 Rorug05G0442600 Rorug05G0442700 Rorug05G0442900
rosa_samantha Rh1AG189900 Rh2DG257500 Rh5AG498900 Rh5AG499100 Rh5AG499400 Rh5AG499500 Rh5AG499600 Rh5AG499700 Rh5AG499900 Rh5AG506800 Rh5BG519900 Rh5BG520100 Rh5BG520400 Rh5BG520500 Rh5BG520600 Rh5BG520800 Rh5BG520900 Rh5BG521100 Rh5CG543900 Rh5CG544100 Rh5CG544400 Rh5CG544500 Rh5CG544600 Rh5CG544800 Rh5CG544900 Rh5CG545000 Rh5CG545200 Rh5DG532700 Rh5DG533100 Rh5DG533200 Rh5DG533400 Rh5DG533500 Rh5DG533600 Rh5DG533700
rosa_wichuraiana Rw5G046310 Rw5G046340 Rw5G046350 Rw5G046360 Rw5G046370 Rw5G046380 Rw5G046400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 391
Acc36I ACCTGC 2 cut(s) 391, 1111
AccB1I GGYRCC 1 cut(s) 66
AccB7I CCANNNNNTGG 1 cut(s) 386
AccII CGCG 1 cut(s) 88
AciI CCGC 5 cut(s) 80, 88, 473, 860, 1101
AclWI GGATC 2 cut(s) 1079, 1092
AcoI YGGCCR 1 cut(s) 279
AcsI RAATTY 5 cut(s) 231, 397, 793, 1006, 1243
AcuI CTGAAG 2 cut(s) 701, 1220
AfaI GTAC 2 cut(s) 581, 605
AfiI CCNNNNNNNGG 6 cut(s) 29, 32, 76, 386, 434, 1094
AgsI TTSAA 7 cut(s) 124, 368, 395, 757, 1035, 1373, 1649
AjnI CCWGG 3 cut(s) 815, 1087, 1408
AjuI GAANNNNNNNTTGG 2 cut(s) 749, 781
Alw21I GWGCWC 1 cut(s) 1162
Alw26I GTCTC 3 cut(s) 251, 270, 1730
AlwI GGATC 2 cut(s) 1079, 1092
AlwNI CAGNNNCTG 5 cut(s) 1360, 1402, 1405, 1636, 1702
AoxI GGCC 2 cut(s) 279, 437
ApoI RAATTY 5 cut(s) 231, 397, 793, 1006, 1243
AseI ATTAAT 3 cut(s) 482, 801, 1227
AspLEI GCGC 2 cut(s) 708, 1701
AspS9I GGNCC 2 cut(s) 437, 1123
AsuC2I CCSGG 2 cut(s) 436, 1027
AsuHPI GGTGA 3 cut(s) 325, 738, 1424
AvaII GGWCC 1 cut(s) 1123
BalI TGGCCA 1 cut(s) 281
BamHI GGATCC 1 cut(s) 1084
BanI GGYRCC 1 cut(s) 66
BanII GRGCYC 1 cut(s) 1136
BarI GAAGNNNNNNTAC 2 cut(s) 563, 595
BbsI GAAGAC 2 cut(s) 303, 1008
Bbv12I GWGCWC 1 cut(s) 1162
BceAI ACGGC 1 cut(s) 1688
BciT130I CCWGG 3 cut(s) 817, 1089, 1410
BciVI GTATCC 1 cut(s) 109
BcnI CCSGG 2 cut(s) 436, 1027
BcoDI GTCTC 3 cut(s) 251, 270, 1730
BfaI CTAG 1 cut(s) 750
BfmI CTRYAG 9 cut(s) 836, 1115, 1214, 1361, 1394, 1502, 1607, 1637, 1679
BfoI RGCGCY 2 cut(s) 709, 1702
BfuAI ACCTGC 2 cut(s) 391, 1111
BfuI GTATCC 1 cut(s) 109
Bme1390I CCNGG 5 cut(s) 436, 817, 1027, 1089, 1410
Bme18I GGWCC 1 cut(s) 1123
BmgT120I GGNCC 2 cut(s) 437, 1123
BmiI GGNNCC 5 cut(s) 68, 1086, 1099, 1125, 1422
BmrFI CCNGG 5 cut(s) 436, 817, 1027, 1089, 1410
BmrI ACTGGG 1 cut(s) 522
BmsI GCATC 9 cut(s) 40, 234, 475, 497, 1323, 1341, 1602, 1617, 1632
BmuI ACTGGG 1 cut(s) 522
BoxI GACNNNNGTC 1 cut(s) 1151
BpiI GAAGAC 2 cut(s) 303, 1008
BplI GAGNNNNNCTC 2 cut(s) 10, 42
BpmI CTGGAG 3 cut(s) 127, 408, 722
BpuEI CTTGAG 8 cut(s) 12, 143, 312, 692, 885, 1292, 1508, 1571
BpuMI CCSGG 2 cut(s) 436, 1027
BsaI GGTCTC 1 cut(s) 251
BsaJI CCNNGG 2 cut(s) 815, 1026
BsaXI ACNNNNNCTCC 2 cut(s) 248, 278
Bsc4I CCNNNNNNNGG 6 cut(s) 29, 32, 76, 386, 434, 1094
Bse1I ACTGG 3 cut(s) 144, 336, 517
Bse3DI GCAATG 2 cut(s) 51, 1628
BseBI CCWGG 3 cut(s) 817, 1089, 1410
BseDI CCNNGG 2 cut(s) 815, 1026
BseGI GGATG 2 cut(s) 55, 1632
BseLI CCNNNNNNNGG 6 cut(s) 29, 32, 76, 386, 434, 1094
BseMI GCAATG 2 cut(s) 51, 1628
BseMII CTCAG 1 cut(s) 281
BseNI ACTGG 3 cut(s) 144, 336, 517
BseRI GAGGAG 2 cut(s) 15, 557
BseYI CCCAGC 2 cut(s) 305, 1425
BsgI GTGCAG 1 cut(s) 402
Bsh1236I CGCG 1 cut(s) 88
BshFI GGCC 2 cut(s) 281, 439
BshNI GGYRCC 1 cut(s) 66
BsiHKAI GWGCWC 1 cut(s) 1162
BsiSI CCGG 2 cut(s) 435, 1026
BslFI GGGAC 2 cut(s) 1109, 1296
BslI CCNNNNNNNGG 6 cut(s) 29, 32, 76, 386, 434, 1094
BsmAI GTCTC 3 cut(s) 251, 270, 1730
BsmFI GGGAC 2 cut(s) 1109, 1296
BsnI GGCC 2 cut(s) 281, 439
Bso31I GGTCTC 1 cut(s) 251
Bsp1286I GDGCHC 2 cut(s) 1136, 1162
Bsp143I GATC 3 cut(s) 558, 664, 1084
BspACI CCGC 5 cut(s) 80, 88, 473, 860, 1101
BspANI GGCC 2 cut(s) 281, 439
BspCNI CTCAG 1 cut(s) 280
BspFNI CGCG 1 cut(s) 88
BspHI TCATGA 2 cut(s) 567, 913
BspLI GGNNCC 5 cut(s) 68, 1086, 1099, 1125, 1422
BspMAI CTGCAG 6 cut(s) 840, 1119, 1218, 1365, 1506, 1641
BspMI ACCTGC 2 cut(s) 391, 1111
BspPI GGATC 2 cut(s) 1079, 1092
BspT107I GGYRCC 1 cut(s) 66
BspTNI GGTCTC 1 cut(s) 251
BsrDI GCAATG 2 cut(s) 51, 1628
BsrI ACTGG 3 cut(s) 144, 336, 517
BssECI CCNNGG 2 cut(s) 815, 1026
BssMI GATC 3 cut(s) 558, 664, 1084
Bst2UI CCWGG 3 cut(s) 817, 1089, 1410
Bst4CI ACNGT 3 cut(s) 718, 1416, 1596
Bst6I CTCTTC 1 cut(s) 119
BstAPI GCANNNNNTGC 9 cut(s) 50, 454, 874, 1351, 1360, 1405, 1627, 1636, 1702
BstC8I GCNNGC 6 cut(s) 42, 78, 406, 998, 1689, 1703
BstDEI CTNAG 2 cut(s) 267, 593
BstENI CCTNNNNNAGG 1 cut(s) 27
BstF5I GGATG 2 cut(s) 55, 1632
BstFNI CGCG 1 cut(s) 88
BstH2I RGCGCY 2 cut(s) 709, 1702
BstHHI GCGC 2 cut(s) 708, 1701
BstKTI GATC 3 cut(s) 561, 667, 1087
BstMAI GTCTC 3 cut(s) 251, 270, 1730
BstMBI GATC 3 cut(s) 558, 664, 1084
BstNI CCWGG 3 cut(s) 817, 1089, 1410
BstNSI RCATGY 1 cut(s) 1213
BstPAI GACNNNNGTC 1 cut(s) 1151
BstSCI CCNGG 5 cut(s) 434, 815, 1025, 1087, 1408
BstSFI CTRYAG 9 cut(s) 836, 1115, 1214, 1361, 1394, 1502, 1607, 1637, 1679
BstUI CGCG 1 cut(s) 88
BstV2I GAAGAC 2 cut(s) 303, 1008
BstX2I RGATCY 1 cut(s) 1084
BstYI RGATCY 1 cut(s) 1084
BsuI GTATCC 1 cut(s) 109
BsuRI GGCC 2 cut(s) 281, 439
BtsCI GGATG 2 cut(s) 55, 1632
BtsI GCAGTG 1 cut(s) 1112
BtsIMutI CAGTG 6 cut(s) 151, 1103, 1112, 1162, 1447, 1512
BveI ACCTGC 2 cut(s) 391, 1111
Cac8I GCNNGC 6 cut(s) 42, 78, 406, 998, 1689, 1703
CaiI CAGNNNCTG 5 cut(s) 1360, 1402, 1405, 1636, 1702
CciI TCATGA 2 cut(s) 567, 913
CfoI GCGC 2 cut(s) 708, 1701
Cfr13I GGNCC 2 cut(s) 437, 1123
CseI GACGC 1 cut(s) 1544
Csp6I GTAC 2 cut(s) 580, 604
CviAII CATG 9 cut(s) 568, 697, 874, 914, 1051, 1177, 1210, 1456, 1462
CviQI GTAC 2 cut(s) 580, 604
DdeI CTNAG 2 cut(s) 267, 593
DpnI GATC 3 cut(s) 560, 666, 1086
DpnII GATC 3 cut(s) 558, 664, 1084
EaeI YGGCCR 1 cut(s) 279
Eam1104I CTCTTC 1 cut(s) 119
EarI CTCTTC 1 cut(s) 119
EciI GGCGGA 1 cut(s) 95
Eco24I GRGCYC 1 cut(s) 1136
Eco31I GGTCTC 1 cut(s) 251
Eco47I GGWCC 1 cut(s) 1123
Eco57I CTGAAG 2 cut(s) 701, 1220
EcoNI CCTNNNNNAGG 1 cut(s) 27
EcoO109I RGGNCCY 1 cut(s) 1123
EcoRII CCWGG 3 cut(s) 815, 1087, 1408
EcoT38I GRGCYC 1 cut(s) 1136
FaeI CATG 9 cut(s) 571, 700, 877, 917, 1054, 1180, 1213, 1459, 1465
FaqI GGGAC 2 cut(s) 1109, 1296
FatI CATG 9 cut(s) 567, 696, 873, 913, 1050, 1176, 1209, 1455, 1461
FauNDI CATATG 1 cut(s) 864
FokI GGATG 2 cut(s) 62, 1639
FriOI GRGCYC 1 cut(s) 1136
FspBI CTAG 1 cut(s) 750
GlaI GCGC 2 cut(s) 707, 1700
GsaI CCCAGC 2 cut(s) 309, 1429
GsuI CTGGAG 3 cut(s) 127, 408, 722
HaeII RGCGCY 2 cut(s) 709, 1702
HaeIII GGCC 2 cut(s) 281, 439
HapII CCGG 2 cut(s) 435, 1026
HgaI GACGC 1 cut(s) 1544
HhaI GCGC 2 cut(s) 708, 1701
Hin1II CATG 9 cut(s) 571, 700, 877, 917, 1054, 1180, 1213, 1459, 1465
Hin6I GCGC 2 cut(s) 706, 1699
HinP1I GCGC 2 cut(s) 706, 1699
HinfI GANTC 8 cut(s) 19, 83, 497, 638, 1057, 1300, 1465, 1517
HpaII CCGG 2 cut(s) 435, 1026
HphI GGTGA 3 cut(s) 325, 738, 1424
Hpy166II GTNNAC 1 cut(s) 1582
Hpy188I TCNGA 8 cut(s) 217, 270, 358, 664, 924, 1272, 1299, 1560
Hpy188III TCNNGA 5 cut(s) 160, 508, 568, 914, 1649
Hpy8I GTNNAC 1 cut(s) 1582
HpyAV CCTTC 5 cut(s) 565, 653, 751, 1244, 1763
HpyCH4III ACNGT 3 cut(s) 718, 1416, 1596
HpyF3I CTNAG 2 cut(s) 267, 593
Hsp92II CATG 9 cut(s) 571, 700, 877, 917, 1054, 1180, 1213, 1459, 1465
HspAI GCGC 2 cut(s) 706, 1699
Kzo9I GATC 3 cut(s) 558, 664, 1084
LmnI GCTCC 4 cut(s) 527, 703, 855, 1165
LweI GCATC 9 cut(s) 40, 234, 475, 497, 1323, 1341, 1602, 1617, 1632
MaeI CTAG 1 cut(s) 750
MaeIII GTNAC 4 cut(s) 331, 371, 737, 882
MalI GATC 3 cut(s) 560, 666, 1086
MboI GATC 3 cut(s) 558, 664, 1084
MboII GAAGA 6 cut(s) 136, 161, 303, 694, 822, 1008
MfeI CAATTG 3 cut(s) 71, 935, 1289
MflI RGATCY 1 cut(s) 1084
MhlI GDGCHC 2 cut(s) 1136, 1162
MlsI TGGCCA 1 cut(s) 281
MluNI TGGCCA 1 cut(s) 281
MlyI GAGTC 2 cut(s) 28, 632
MmeI TCCRAC 3 cut(s) 321, 1165, 1398
Mox20I TGGCCA 1 cut(s) 281
MscI TGGCCA 1 cut(s) 281
MseI TTAA 7 cut(s) 482, 690, 801, 1206, 1227, 1449, 1783
MslI CAYNNNNRTG 1 cut(s) 1460
Msp20I TGGCCA 1 cut(s) 281
MspA1I CMGCKG 1 cut(s) 1402
MspI CCGG 2 cut(s) 435, 1026
MspR9I CCNGG 5 cut(s) 436, 817, 1027, 1089, 1410
MunI CAATTG 3 cut(s) 71, 935, 1289
MvaI CCWGG 3 cut(s) 817, 1089, 1410
MvnI CGCG 1 cut(s) 88
NciI CCSGG 2 cut(s) 436, 1027
NdeI CATATG 1 cut(s) 864
NdeII GATC 3 cut(s) 558, 664, 1084
NlaIII CATG 9 cut(s) 571, 700, 877, 917, 1054, 1180, 1213, 1459, 1465
NlaIV GGNNCC 5 cut(s) 68, 1086, 1099, 1125, 1422
NmuCI GTSAC 2 cut(s) 331, 882
NspI RCATGY 1 cut(s) 1213
PagI TCATGA 2 cut(s) 567, 913
PaqCI CACCTGC 1 cut(s) 391
PfeI GAWTC 6 cut(s) 83, 497, 1057, 1300, 1465, 1517
PflFI GACNNNGTC 1 cut(s) 262
PflMI CCANNNNNTGG 1 cut(s) 386
PfoI TCCNGGA 1 cut(s) 1087
PleI GAGTC 2 cut(s) 27, 632
PpsI GAGTC 2 cut(s) 27, 632
PpuMI RGGWCCY 1 cut(s) 1123
PshAI GACNNNNGTC 1 cut(s) 1151
PshBI ATTAAT 3 cut(s) 482, 801, 1227
Psp5II RGGWCCY 1 cut(s) 1123
Psp6I CCWGG 3 cut(s) 815, 1087, 1408
PspFI CCCAGC 2 cut(s) 305, 1425
PspGI CCWGG 3 cut(s) 815, 1087, 1408
PspN4I GGNNCC 5 cut(s) 68, 1086, 1099, 1125, 1422
PspPI GGNCC 2 cut(s) 437, 1123
PspPPI RGGWCCY 1 cut(s) 1123
PstI CTGCAG 6 cut(s) 840, 1119, 1218, 1365, 1506, 1641
PstNI CAGNNNCTG 5 cut(s) 1360, 1402, 1405, 1636, 1702
PsuI RGATCY 1 cut(s) 1084
PsyI GACNNNGTC 1 cut(s) 262
PvuII CAGCTG 1 cut(s) 1402
RsaI GTAC 2 cut(s) 581, 605
RsaNI GTAC 2 cut(s) 580, 604
RseI CAYNNNNRTG 1 cut(s) 1460
SaqAI TTAA 7 cut(s) 482, 690, 801, 1206, 1227, 1449, 1783
Sau3AI GATC 3 cut(s) 558, 664, 1084
Sau96I GGNCC 2 cut(s) 437, 1123
SchI GAGTC 2 cut(s) 28, 632
ScrFI CCNGG 5 cut(s) 436, 817, 1027, 1089, 1410
SduI GDGCHC 2 cut(s) 1136, 1162
SfaNI GCATC 9 cut(s) 40, 234, 475, 497, 1323, 1341, 1602, 1617, 1632
SfcI CTRYAG 9 cut(s) 836, 1115, 1214, 1361, 1394, 1502, 1607, 1637, 1679
SinI GGWCC 1 cut(s) 1123
SmiMI CAYNNNNRTG 1 cut(s) 1460
SmlI CTYRAG 8 cut(s) 27, 158, 327, 671, 900, 1307, 1523, 1586
SmoI CTYRAG 8 cut(s) 27, 158, 327, 671, 900, 1307, 1523, 1586
SsiI CCGC 5 cut(s) 80, 88, 473, 860, 1101
SspI AATATT 1 cut(s) 453
SspMI CTAG 1 cut(s) 750
StyD4I CCNGG 5 cut(s) 434, 815, 1025, 1087, 1408
TaaI ACNGT 3 cut(s) 718, 1416, 1596
TaqI TCGA 1 cut(s) 227
TatI WGTACW 1 cut(s) 579
TauI GCSGC 1 cut(s) 91
TfiI GAWTC 6 cut(s) 83, 497, 1057, 1300, 1465, 1517
Tru1I TTAA 7 cut(s) 482, 690, 801, 1206, 1227, 1449, 1783
Tru9I TTAA 7 cut(s) 482, 690, 801, 1206, 1227, 1449, 1783
TscAI CASTG 6 cut(s) 151, 1110, 1119, 1162, 1447, 1519
TseFI GTSAC 2 cut(s) 331, 882
Tsp45I GTSAC 2 cut(s) 331, 882
TspGWI ACGGA 1 cut(s) 1050
TspRI CASTG 6 cut(s) 151, 1110, 1119, 1162, 1447, 1519
Tth111I GACNNNGTC 1 cut(s) 262
Van91I CCANNNNNTGG 1 cut(s) 386
VpaK11BI GGWCC 1 cut(s) 1123
VspI ATTAAT 3 cut(s) 482, 801, 1227
XagI CCTNNNNNAGG 1 cut(s) 27
XapI RAATTY 5 cut(s) 231, 397, 793, 1006, 1243
XceI RCATGY 1 cut(s) 1213
XspI CTAG 1 cut(s) 750
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.