Rh5BG520900

mediator of RNA polymerase II transcription subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000315
Physical Location & Seq
Forward (+)
82342210 .. 82348644
6435 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG520900.1

Sequence Viewer

Length: 2031 bp
ATGCTAGTAGCTGCTGTTATAACATTGGAGGGTATGCAACTTCATCGGCAAAGGGAACTAGAGCAGTGGCATCTAAATCAACCCACCCACAAGAAGAAGAAGCAATTTCAGCGACTCTGCGACACTTGCGAGGTCGGTGGAAGCTTCCCAGATGAGGGATTGGGTGTCCAAGACAGGAATAGATCTGCCCAAGAGAAATTGGACCAAGCCCAGATTGAAGCTCTTCTCAAAGGTGGAGAGGAAGTCACTTCTGTCCTTGAAGAAATGATCACCCTCCCATTTTGTATCTTCAAATCCCTCCAAGAAAACGGTATTGTTATTTTCAATCCTTCTGCTGATCGTCTTATTGTCACTGTTTGTTTGATGGATAACAACAATGGGAGTCCTCCTCAAGGTGGAGAGCCTGCAATGGATGCAGGAGATTGGAGGAGCCACTTGCAGGCAGATTCGCGGCAAAGAATTGTCAATAAGTTAACGGATATATTGAAGAGGCATATTCCTTACTCTGGTGAAGATGAACTCAAGAAAATTGCTGTTAGGTTTGAGGAAAAGATTTATGTTGCTGCCCCAAGTCAGTCAGATTATCTATCGAAAATTTCTCTAAAGATGCTCTCTTTGGAGACCAAGTCTCAGAACACAATGGCCAATTCTTTACAATCCAACTCTGCTGGGTCTTCTGGTATGCAACCTCAAGTCACCAGTCAAGGACAACTCTTATCAGAGAACATTCAAACATATTTGGATTCCACAATCCAGACTGGGAATACAAATGGAGCTGATTGGCAAGAGGAGGGCTATCAAAAGATCAAAGTCATGAAGGAGATGTACTACCCTGAACTAAGTGAAATGTACCAAAAACTTGCTACTAAACTTCATCAGCACGACTCCCTTCCACAACAGCCAAAGTCAGATCAGCTTGAGAAGCTGAAGATGTTTAAGACCATGCTGGAGCGCCTGATAACAGTCTTACAAATTTCCAAAACTAGCATAACACCTGGTTTGAAGGAGAAGTTGGGTTTATACGAGAAGCAGATAATAAATTTTATTAATACAAATAGACCCAGGAAGCCTGTTTCTTCTCTGCCGCCAGGGCAGCTCCCCCCACCGCATATGCAGTCCATGCAGCAGTCACAATCCCAGATTACTCAAGTGCAATCTCATGAAAATCAGATGAACCCACAATTGCAATCCCTGAACTTGCAAGGTTCTGTGCCAACAATGCAGCAGAACAATATGACGGGCTTGCAGCAAAATTCTATGTCTTCTTTATCTGGGGTTTCAACAGCACAGCAAAACATGATGAATCCGTTGCAGCCAAGTTCCAATATGGATCCAGGACAAGGAACTGCACTGAACTCACTGCAGCAGGTCCCTGCGGGCTCTATCCAACAGACTCCTGTCAGTGCTCCCCAACAAGCTAACATGAATGCCTTATCATCACAGAACGGGATTAACATGCTGCAGAGCAACATTAATCCCCTTCAGTCAAATTCTGGTATGCTTCATGGCCAACATCTGAAACAGCAGGAACAGAAATTGTATCAGAATCAACTCAAGCAACAATATCAACAACGACAGATGCAGCAGCAGCAGTTGATGCAGAAGCAGCAGATATTTCAACAACAACAACAGCAAGAGCTACAGCAGCTGCTGCCTGGACAGTTGGAACCCCAGCTTCACCAAATCAGTGTTGTTAATGACATGAACATGAATCACTTGTCATCATCAAAGAGTGGGAGTAATATGCTGCAGGAAAGCACTGATTCCCTCAAGTCAAACTCTGGTATGCTTGATAACCAGCGTCAGAAGCAAGAAACTTCCTCTGTGAACCTCAAGCAACTGTATCAACAGCTACAGATGCAGCAGCAATGGATGCAGAAACTGCAGATGCTTCAAGAAAAGCAACAGCAGCAGATACAGCAGCTACAGCAGCAAGCAAAGCAGCGGCTGCATTTTATTTATTTCATCTGTCTCATCTTTCTCATTATTCTATACGTTGCTGCTGTTTTCGGGAAAGGCTATTGGATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KIX_2

Protein Analysis

676

Amino Acids

76.73

Weight (kDa)

8.34

Isoelectric Point (pI)

58.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIX_2 PF16987 140 - 216 2.7e-27 KIX domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000315)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15790 AT1G15790 AT1G15790 AT1G15790 AT1G15790
fragaria_vesca FvH4_3g12350 FvH4_3g37483 FvH4_3g42320 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42361
malus_domestica MD03G1031600.v1.1 MD03G1031700.v1.1 MD03G1033500.v1.1 MD07G1261500.v1.1 MD11G1035800.v1.1
prunus_persica Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1
pyrus_communis pycom03g02570 pycom03g02580
rosa_chinensis RchiOBHm_Chr4g0419101 RchiOBHm_Chr5g0075711 RchiOBHm_Chr5g0075731 RchiOBHm_Chr5g0075781 RchiOBHm_Chr5g0075801 RchiOBHm_Chr5g0075811 RchiOBHm_Chr5g0075831 RchiOBHm_Chr5g0075841 RchiOBHm_Chr5g0075851 RchiOBHm_Chr5g0075861
rosa_laevigata RLG00000029834 RLG00000036588 RLG00000036591 RLG00000036592 RLG00000036594 RLG00000036595 RLG00000036597 RLG00000036647
rosa_multiflora Rmu_co8127406.1_g000001 Rmu_co8138284.1_g000001 Rmu_sc0002101.1_g000001 Rmu_sc0002101.1_g000006 Rmu_sc0002652.1_g000027 Rmu_sc0002652.1_g000029 Rmu_sc0008562.1_g000002 Rmu_sc0019599.1_g000001 Rmu_sc0019861.1_g000005 Rmu_sc0029317.1_g000001 Rmu_sc0031378.1_g000001 Rmu_ssc0000402.1_g000001
rosa_roxburghii Rroxscaffold_1G00005820 Rroxscaffold_1G00005830 Rroxscaffold_1G00005840 Rroxscaffold_1G00005850 Rroxscaffold_1G00005860 Rroxscaffold_1G00005870 Rroxscaffold_1G00005890 Rroxscaffold_5G00340930 Rroxscaffold_5G00343250 Rroxscaffold_5G00369260
rosa_rugosa Rorug05G0442200 Rorug05G0442300.1 Rorug05G0442400 Rorug05G0442500 Rorug05G0442600 Rorug05G0442700 Rorug05G0442900
rosa_samantha Rh1AG189900 Rh2DG257500 Rh5AG498900 Rh5AG499100 Rh5AG499400 Rh5AG499500 Rh5AG499600 Rh5AG499700 Rh5AG499900 Rh5AG506800 Rh5BG519900 Rh5BG520100 Rh5BG520400 Rh5BG520500 Rh5BG520600 Rh5BG520800 Rh5BG520900 Rh5BG521100 Rh5CG543900 Rh5CG544100 Rh5CG544400 Rh5CG544500 Rh5CG544600 Rh5CG544800 Rh5CG544900 Rh5CG545000 Rh5CG545200 Rh5DG532700 Rh5DG533100 Rh5DG533200 Rh5DG533400 Rh5DG533500 Rh5DG533600 Rh5DG533700
rosa_wichuraiana Rw5G046310 Rw5G046340 Rw5G046350 Rw5G046360 Rw5G046370 Rw5G046380 Rw5G046400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 20
Acc36I ACCTGC 1 cut(s) 1357
AccII CGCG 1 cut(s) 451
AciI CCGC 5 cut(s) 451, 1085, 1106, 1376, 1945
AclWI GGATC 2 cut(s) 1325, 1338
AcoI YGGCCR 2 cut(s) 642, 1507
AcsI RAATTY 5 cut(s) 594, 972, 1039, 1252, 1489
AcuI CTGAAG 2 cut(s) 947, 1466
AfaI GTAC 2 cut(s) 827, 851
AfiI CCNNNNNNNGG 7 cut(s) 154, 155, 392, 395, 439, 506, 1340
AjnI CCWGG 5 cut(s) 994, 1061, 1087, 1333, 1654
AjuI GAANNNNNNNTTGG 2 cut(s) 995, 1027
Alw21I GWGCWC 1 cut(s) 1408
Alw26I GTCTC 3 cut(s) 614, 633, 1976
AlwI GGATC 2 cut(s) 1325, 1338
AlwNI CAGNNNCTG 4 cut(s) 1648, 1651, 1882, 1948
AoxI GGCC 2 cut(s) 642, 1507
ApoI RAATTY 5 cut(s) 594, 972, 1039, 1252, 1489
AseI ATTAAT 2 cut(s) 1047, 1473
Asp700I GAANNNNTTC 1 cut(s) 222
AspLEI GCGC 1 cut(s) 954
AspS9I GGNCC 2 cut(s) 202, 1369
AsuHPI GGTGA 4 cut(s) 262, 521, 688, 1670
AvaII GGWCC 2 cut(s) 202, 1369
BalI TGGCCA 2 cut(s) 644, 1509
BamHI GGATCC 1 cut(s) 1330
BanII GRGCYC 1 cut(s) 1382
BarI GAAGNNNNNNTAC 2 cut(s) 809, 841
BbsI GAAGAC 2 cut(s) 666, 1254
Bbv12I GWGCWC 1 cut(s) 1408
BccI CCATC 1 cut(s) 358
BcgI CGANNNNNNTGC 2 cut(s) 26, 60
BciT130I CCWGG 5 cut(s) 996, 1063, 1089, 1335, 1656
BclI TGATCA 1 cut(s) 267
BcoDI GTCTC 3 cut(s) 614, 633, 1976
BfaI CTAG 3 cut(s) 5, 59, 984
BfmI CTRYAG 7 cut(s) 1361, 1460, 1640, 1748, 1853, 1883, 1925
BfoI RGCGCY 1 cut(s) 955
BfuAI ACCTGC 1 cut(s) 1357
BglI GCCNNNNNGGC 1 cut(s) 1090
BglII AGATCT 1 cut(s) 182
Bme1390I CCNGG 5 cut(s) 996, 1063, 1089, 1335, 1656
Bme18I GGWCC 2 cut(s) 202, 1369
BmgT120I GGNCC 2 cut(s) 202, 1369
BmiI GGNNCC 4 cut(s) 431, 1332, 1371, 1668
BmrFI CCNGG 5 cut(s) 996, 1063, 1089, 1335, 1656
BmrI ACTGGG 1 cut(s) 768
BmsI GCATC 8 cut(s) 79, 403, 597, 1569, 1587, 1848, 1863, 1878
BmuI ACTGGG 1 cut(s) 768
BoxI GACNNNNGTC 1 cut(s) 1397
BpiI GAAGAC 2 cut(s) 666, 1254
BplI GAGNNNNNCTC 2 cut(s) 373, 405
BpmI CTGGAG 1 cut(s) 968
BpuEI CTTGAG 8 cut(s) 375, 506, 675, 938, 1131, 1538, 1754, 1817
BsaI GGTCTC 1 cut(s) 614
BsaJI CCNNGG 2 cut(s) 1061, 1088
BsaXI ACNNNNNCTCC 4 cut(s) 228, 258, 611, 641
Bsc4I CCNNNNNNNGG 7 cut(s) 154, 155, 392, 395, 439, 506, 1340
Bse1I ACTGG 2 cut(s) 699, 763
Bse3DI GCAATG 2 cut(s) 414, 1874
BseBI CCWGG 5 cut(s) 996, 1063, 1089, 1335, 1656
BseDI CCNNGG 2 cut(s) 1061, 1088
BseGI GGATG 2 cut(s) 418, 1878
BseLI CCNNNNNNNGG 7 cut(s) 154, 155, 392, 395, 439, 506, 1340
BseMI GCAATG 2 cut(s) 414, 1874
BseMII CTCAG 1 cut(s) 644
BseNI ACTGG 2 cut(s) 699, 763
BseRI GAGGAG 3 cut(s) 378, 442, 803
BseYI CCCAGC 2 cut(s) 668, 1671
BsgI GTGCAG 1 cut(s) 1332
Bsh1236I CGCG 1 cut(s) 451
BshFI GGCC 2 cut(s) 644, 1509
BsiHKAI GWGCWC 1 cut(s) 1408
BslFI GGGAC 1 cut(s) 1355
BslI CCNNNNNNNGG 7 cut(s) 154, 155, 392, 395, 439, 506, 1340
BsmAI GTCTC 3 cut(s) 614, 633, 1976
BsmFI GGGAC 1 cut(s) 1355
BsmI GAATGC 1 cut(s) 1432
BsnI GGCC 2 cut(s) 644, 1509
Bso31I GGTCTC 1 cut(s) 614
Bsp1286I GDGCHC 2 cut(s) 1382, 1408
Bsp143I GATC 6 cut(s) 182, 267, 337, 804, 910, 1330
BspACI CCGC 5 cut(s) 451, 1085, 1106, 1376, 1945
BspANI GGCC 2 cut(s) 644, 1509
BspCNI CTCAG 1 cut(s) 643
BspFNI CGCG 1 cut(s) 451
BspHI TCATGA 2 cut(s) 813, 1159
BspLI GGNNCC 4 cut(s) 431, 1332, 1371, 1668
BspMAI CTGCAG 4 cut(s) 1365, 1464, 1752, 1887
BspMI ACCTGC 1 cut(s) 1357
BspPI GGATC 2 cut(s) 1325, 1338
BspQI GCTCTTC 1 cut(s) 228
BspTNI GGTCTC 1 cut(s) 614
BsrDI GCAATG 2 cut(s) 414, 1874
BsrI ACTGG 2 cut(s) 699, 763
BssECI CCNNGG 2 cut(s) 1061, 1088
BssMI GATC 6 cut(s) 182, 267, 337, 804, 910, 1330
Bst2UI CCWGG 5 cut(s) 996, 1063, 1089, 1335, 1656
Bst4CI ACNGT 5 cut(s) 311, 355, 964, 1662, 1842
Bst6I CTCTTC 2 cut(s) 228, 482
BstAPI GCANNNNNTGC 7 cut(s) 413, 1120, 1597, 1651, 1873, 1882, 1948
BstC8I GCNNGC 5 cut(s) 405, 441, 1244, 1378, 1935
BstDEI CTNAG 2 cut(s) 630, 839
BstENI CCTNNNNNAGG 1 cut(s) 390
BstF5I GGATG 2 cut(s) 418, 1878
BstFNI CGCG 1 cut(s) 451
BstH2I RGCGCY 1 cut(s) 955
BstHHI GCGC 1 cut(s) 954
BstKTI GATC 6 cut(s) 185, 270, 340, 807, 913, 1333
BstMAI GTCTC 3 cut(s) 614, 633, 1976
BstMBI GATC 6 cut(s) 182, 267, 337, 804, 910, 1330
BstNI CCWGG 5 cut(s) 996, 1063, 1089, 1335, 1656
BstNSI RCATGY 1 cut(s) 1459
BstPAI GACNNNNGTC 1 cut(s) 1397
BstSCI CCNGG 5 cut(s) 994, 1061, 1087, 1333, 1654
BstSFI CTRYAG 7 cut(s) 1361, 1460, 1640, 1748, 1853, 1883, 1925
BstUI CGCG 1 cut(s) 451
BstV2I GAAGAC 2 cut(s) 666, 1254
BstX2I RGATCY 2 cut(s) 182, 1330
BstYI RGATCY 2 cut(s) 182, 1330
BsuRI GGCC 2 cut(s) 644, 1509
BtsCI GGATG 2 cut(s) 418, 1878
BtsI GCAGTG 2 cut(s) 71, 1358
BtsIMutI CAGTG 7 cut(s) 71, 351, 1349, 1358, 1408, 1693, 1758
BveI ACCTGC 1 cut(s) 1357
Cac8I GCNNGC 5 cut(s) 405, 441, 1244, 1378, 1935
CaiI CAGNNNCTG 4 cut(s) 1648, 1651, 1882, 1948
CciI TCATGA 2 cut(s) 813, 1159
CfoI GCGC 1 cut(s) 954
Cfr13I GGNCC 2 cut(s) 202, 1369
CseI GACGC 1 cut(s) 1790
CsiI ACCWGGT 1 cut(s) 994
Csp6I GTAC 2 cut(s) 826, 850
CviQI GTAC 2 cut(s) 826, 850
DdeI CTNAG 2 cut(s) 630, 839
DpnI GATC 6 cut(s) 184, 269, 339, 806, 912, 1332
DpnII GATC 6 cut(s) 182, 267, 337, 804, 910, 1330
EaeI YGGCCR 2 cut(s) 642, 1507
Eam1104I CTCTTC 2 cut(s) 228, 482
EarI CTCTTC 2 cut(s) 228, 482
Eco24I GRGCYC 1 cut(s) 1382
Eco31I GGTCTC 1 cut(s) 614
Eco47I GGWCC 2 cut(s) 202, 1369
Eco57I CTGAAG 2 cut(s) 947, 1466
EcoNI CCTNNNNNAGG 1 cut(s) 390
EcoO109I RGGNCCY 1 cut(s) 1369
EcoRII CCWGG 5 cut(s) 994, 1061, 1087, 1333, 1654
EcoT38I GRGCYC 1 cut(s) 1382
FaqI GGGAC 1 cut(s) 1355
FauI CCCGC 1 cut(s) 1369
FauNDI CATATG 1 cut(s) 1110
FbaI TGATCA 1 cut(s) 267
FokI GGATG 2 cut(s) 425, 1885
FriOI GRGCYC 1 cut(s) 1382
FspBI CTAG 3 cut(s) 5, 59, 984
GlaI GCGC 1 cut(s) 953
GsaI CCCAGC 2 cut(s) 672, 1675
GsuI CTGGAG 1 cut(s) 968
HaeII RGCGCY 1 cut(s) 955
HaeIII GGCC 2 cut(s) 644, 1509
HgaI GACGC 1 cut(s) 1790
HhaI GCGC 1 cut(s) 954
Hin6I GCGC 1 cut(s) 952
HinP1I GCGC 1 cut(s) 952
HincII GTYRAC 1 cut(s) 474
HindII GTYRAC 1 cut(s) 474
HindIII AAGCTT 1 cut(s) 142
HpaI GTTAAC 1 cut(s) 474
HphI GGTGA 4 cut(s) 262, 521, 688, 1670
Hpy166II GTNNAC 2 cut(s) 474, 1828
Hpy188I TCNGA 8 cut(s) 580, 633, 721, 910, 1170, 1518, 1545, 1806
Hpy188III TCNNGA 6 cut(s) 523, 754, 814, 1160, 1895, 2011
Hpy8I GTNNAC 2 cut(s) 474, 1828
HpyAV CCTTC 5 cut(s) 339, 811, 899, 997, 1490
HpyCH4III ACNGT 5 cut(s) 311, 355, 964, 1662, 1842
HpyCH4IV ACGT 1 cut(s) 1995
HpyF3I CTNAG 2 cut(s) 630, 839
HpySE526I ACGT 1 cut(s) 1995
HspAI GCGC 1 cut(s) 952
Ksp22I TGATCA 1 cut(s) 267
KspAI GTTAAC 1 cut(s) 474
Kzo9I GATC 6 cut(s) 182, 267, 337, 804, 910, 1330
LguI GCTCTTC 1 cut(s) 228
LmnI GCTCC 5 cut(s) 429, 773, 949, 1101, 1411
LweI GCATC 8 cut(s) 79, 403, 597, 1569, 1587, 1848, 1863, 1878
MabI ACCWGGT 1 cut(s) 994
MaeI CTAG 3 cut(s) 5, 59, 984
MaeII ACGT 1 cut(s) 1995
MaeIII GTNAC 4 cut(s) 244, 349, 694, 1128
MalI GATC 6 cut(s) 184, 269, 339, 806, 912, 1332
MboI GATC 6 cut(s) 182, 267, 337, 804, 910, 1330
MfeI CAATTG 1 cut(s) 1181
MflI RGATCY 2 cut(s) 182, 1330
MhlI GDGCHC 2 cut(s) 1382, 1408
MlsI TGGCCA 2 cut(s) 644, 1509
MluNI TGGCCA 2 cut(s) 644, 1509
MlyI GAGTC 4 cut(s) 108, 391, 878, 1387
MmeI TCCRAC 3 cut(s) 684, 1411, 1644
Mox20I TGGCCA 2 cut(s) 644, 1509
MroXI GAANNNNTTC 1 cut(s) 222
MscI TGGCCA 2 cut(s) 644, 1509
MseI TTAA 7 cut(s) 473, 936, 1047, 1452, 1473, 1695, 2029
MslI CAYNNNNRTG 1 cut(s) 1706
Msp20I TGGCCA 2 cut(s) 644, 1509
MspA1I CMGCKG 2 cut(s) 1648, 1945
MspR9I CCNGG 5 cut(s) 996, 1063, 1089, 1335, 1656
MunI CAATTG 1 cut(s) 1181
Mva1269I GAATGC 1 cut(s) 1432
MvaI CCWGG 5 cut(s) 996, 1063, 1089, 1335, 1656
MvnI CGCG 1 cut(s) 451
NdeI CATATG 1 cut(s) 1110
NdeII GATC 6 cut(s) 182, 267, 337, 804, 910, 1330
NlaIV GGNNCC 4 cut(s) 431, 1332, 1371, 1668
NmuCI GTSAC 4 cut(s) 244, 349, 694, 1128
NspI RCATGY 1 cut(s) 1459
PagI TCATGA 2 cut(s) 813, 1159
PciSI GCTCTTC 1 cut(s) 228
PctI GAATGC 1 cut(s) 1432
PdmI GAANNNNTTC 1 cut(s) 222
PfeI GAWTC 6 cut(s) 446, 743, 1303, 1546, 1711, 1763
PflFI GACNNNGTC 1 cut(s) 625
PfoI TCCNGGA 1 cut(s) 1333
PleI GAGTC 4 cut(s) 108, 390, 878, 1387
PpsI GAGTC 4 cut(s) 108, 390, 878, 1387
PpuMI RGGWCCY 1 cut(s) 1369
PshAI GACNNNNGTC 1 cut(s) 1397
PshBI ATTAAT 2 cut(s) 1047, 1473
PsiI TTATAA 1 cut(s) 20
Psp5II RGGWCCY 1 cut(s) 1369
Psp6I CCWGG 5 cut(s) 994, 1061, 1087, 1333, 1654
PspFI CCCAGC 2 cut(s) 668, 1671
PspGI CCWGG 5 cut(s) 994, 1061, 1087, 1333, 1654
PspN4I GGNNCC 4 cut(s) 431, 1332, 1371, 1668
PspPI GGNCC 2 cut(s) 202, 1369
PspPPI RGGWCCY 1 cut(s) 1369
PstI CTGCAG 4 cut(s) 1365, 1464, 1752, 1887
PstNI CAGNNNCTG 4 cut(s) 1648, 1651, 1882, 1948
PsuI RGATCY 2 cut(s) 182, 1330
PsyI GACNNNGTC 1 cut(s) 625
PvuII CAGCTG 1 cut(s) 1648
RsaI GTAC 2 cut(s) 827, 851
RsaNI GTAC 2 cut(s) 826, 850
RseI CAYNNNNRTG 1 cut(s) 1706
SapI GCTCTTC 1 cut(s) 228
SaqAI TTAA 7 cut(s) 473, 936, 1047, 1452, 1473, 1695, 2029
Sau3AI GATC 6 cut(s) 182, 267, 337, 804, 910, 1330
Sau96I GGNCC 2 cut(s) 202, 1369
SchI GAGTC 4 cut(s) 108, 391, 878, 1387
ScrFI CCNGG 5 cut(s) 996, 1063, 1089, 1335, 1656
SduI GDGCHC 2 cut(s) 1382, 1408
SexAI ACCWGGT 1 cut(s) 994
SfaNI GCATC 8 cut(s) 79, 403, 597, 1569, 1587, 1848, 1863, 1878
SfcI CTRYAG 7 cut(s) 1361, 1460, 1640, 1748, 1853, 1883, 1925
SinI GGWCC 2 cut(s) 202, 1369
SmiMI CAYNNNNRTG 1 cut(s) 1706
SmlI CTYRAG 8 cut(s) 390, 521, 690, 917, 1146, 1553, 1769, 1832
SmoI CTYRAG 8 cut(s) 390, 521, 690, 917, 1146, 1553, 1769, 1832
SsiI CCGC 5 cut(s) 451, 1085, 1106, 1376, 1945
SspMI CTAG 3 cut(s) 5, 59, 984
StyD4I CCNGG 5 cut(s) 994, 1061, 1087, 1333, 1654
TaaI ACNGT 5 cut(s) 311, 355, 964, 1662, 1842
TaiI ACGT 1 cut(s) 1998
TaqI TCGA 1 cut(s) 590
TatI WGTACW 1 cut(s) 825
TauI GCSGC 3 cut(s) 454, 1087, 1948
TfiI GAWTC 6 cut(s) 446, 743, 1303, 1546, 1711, 1763
Tru1I TTAA 7 cut(s) 473, 936, 1047, 1452, 1473, 1695, 2029
Tru9I TTAA 7 cut(s) 473, 936, 1047, 1452, 1473, 1695, 2029
TscAI CASTG 7 cut(s) 71, 358, 1356, 1365, 1408, 1693, 1765
TseFI GTSAC 4 cut(s) 244, 349, 694, 1128
Tsp45I GTSAC 4 cut(s) 244, 349, 694, 1128
TspGWI ACGGA 2 cut(s) 491, 1296
TspRI CASTG 7 cut(s) 71, 358, 1356, 1365, 1408, 1693, 1765
Tth111I GACNNNGTC 1 cut(s) 625
VpaK11BI GGWCC 2 cut(s) 202, 1369
VspI ATTAAT 2 cut(s) 1047, 1473
XagI CCTNNNNNAGG 1 cut(s) 390
XapI RAATTY 5 cut(s) 594, 972, 1039, 1252, 1489
XceI RCATGY 1 cut(s) 1459
XmnI GAANNNNTTC 1 cut(s) 222
XspI CTAG 3 cut(s) 5, 59, 984
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.