Rh5AG499700

KIX domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000315
Physical Location & Seq
Forward (+)
84642967 .. 84668314
25348 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG499700.1

Sequence Viewer

Length: 2328 bp
ATGGATAACAACGATGGGAGTCCTCCTAACGGTGGAGAGCCTGCAATGGATGCAGGAGATTGGAGGAACAAACTGCAGGCGGATTCGCGGCAAAGAATTGTCAATAAGATAATGGATACATTGAAGAGGCATCTTCCTTTCTCCGGTCAAGAGGGATTGCATGAACTCAAGAAAATTGCTGTTAGGTTCGAGGAAAAGATTTATACTGCTGCCACAAGTCAGTCAGATTATCTACGGAAAATTTCTCTGAAGATGCTCACTATGGAGATCAAGTCTCAGACCAAAATGGCCAATTCTTTACAATCCAACTCTGCTGGGTCTTCTGGTATGCAACCTCAAGTCACCAATCAAGGACAACTCTTATCAGAGAACATTCAAAGTAACATTCCACCTGCTGGAGTTCAAAATTCTGCTGGCTTATCATCTGCACTACCCCCTACCTCTGGGCTCAGCTTATCATCTGACATGAACATTTCTAGTTCATCATTTGAACTATTTCCTATCTGCGGTCTAGTTCCCTCGAAGAAGGACGCAGTCCAGTCAGATTGGAAGGCTCATAGCAAGATTTGCGGGGCTAGTGAGTATAGATGTGACTGTGGCACACTCTTTTCCAGGAATGAGAGCTTCATAACTCATAGAGCTTTCTGTGATGCATTGGCGGCTGAAGAAAGTGCAAGGTTTGGTTCAACTTCAACAGCCACCAACATTAATATTCCGAGCTTCATGCCGGACTCATCTTCCGCTTTACCTCCTGCCTTCAGTCTAGACTTATTGACTAATTATCATAGGCAAATGCAAGGACAGCAACAGGTAGTTCCTCAACAGCAACAGCAACAGCAGCAATCAGAGTATTCACAGCAGCGGATTTCTCAGCAACAGATACAACAAGAACTTATTCGAAATATCCAACAGCAACAAAAGCAGCAGCAGATGCTATTACAAAAAAAACCATTGTCATCTTCTCAGCAATCTCATGTACAATCAGCATCTTCTGCAGTGGAATCTTTTCTCTGTAGGCTTCAGCAGAATCAACAATTAGCTATTTCCCAGTTGACACAACCCATGCTTCAGCAAACAGCAATGCCACAACAGCAAATATTGCCGCCACAGCATCAACAGCAACAGTTAACAGGTTTGATGGATAACAACAATGGGAGTCCTCCTCAAGGTGGAGAGCCTGCAATGGATGCAGGAGACTGGAGGAGCCACTTGCAGGCAGATTCGCGGCAAAGAATTGTCAATAAGTTAATGGATATATTGAAGAGGCATATTCCTTACTCTGGTGAAGATGAACTCAAGAAAATTGCTGTTAGGTTTGAGGAAAAGATTTATGTTGCTGCCCCAAGTCAGTCAGATTATCTATCGAAAATTTCTCTAAAGATGCTCTCTTTGGAGACCAAGTCTCAGAACACAATGGCCAATTCTTTACAATCCAACTCTGCTGGGTCTTCTGGTATGCAACCTCAAGTCACCAGTCAAGGACAACTCTTATCAGAGAACATTCAAAGTAACATTCCACCTGCTGGAGTTCAAAATTCTGCCGGCTTCTCATCTGCACTACCTCCTACCTCCGGGCCACAACAGCAAATATTTCCCCCACAGCAACAATTAATAGGTTTGATGGATAACAACAATGGGAGTCCTCCTCAAGGTGGAGAGCCTGCAATGGATGCAGGAGATTGGAGGTGCCAATTGCAGGTGGATTCGCGGCAAAGAATTGTCATTAAGATAATGGATACATTGAAGAGGCATCTTCCTTACTCCAATGAAGATGAACTCAAGAAAATTGCTGTTAGGTTTGAGGAAAAGATTTATGTTGCTGCCCCAAGTCAGTCAGATTATCTATCGAAAATTTCTCTAAAGATGCTCACTATGGAGACCAAGTCTCAGAACACAATGGCCAATTCTTTACAATCCAACTCTGCTGGGTCTTCTAGTATGCAACCTCAAGTCACCAGTCAAGGACAACTCTTATCAGAGAACATTCAAAGTAACATTCCACCTGCTGGAGTTCAAAATTCTGCCGGCTTCTCATCTGCACTACCTCCTACCTCCGGGCCACAACAGCAAATATTGCCCCCACAGCAAATATTGCCCCCACAGCAACAATTAATAGGCATCCATCTTGAGATTCTTCTTGCTGGTGGACTCCTCCGTGATGAGTTTGAAGTTGAAATTGGTTTGCTCGGGGTTTTTGTTGACCTTCTGAAGCAGACCTGTGACTTTGATCACGTTGGCCTTCAACTTGATGGTGACATTGTCCGAGGTGTCCCTGGTCTCCGAGGACAGAACCAGTGCCGCCATCCACGCTGCCTCGAGCCTCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KIX_2

Protein Analysis

775

Amino Acids

85.05

Weight (kDa)

6.26

Isoelectric Point (pI)

72.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIX_2 PF16987 19 - 98 5.5e-34 KIX domain
C2CH-3rd_BIRD-IDD PF22995 174 - 191 9.6e-07 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 194 - 232 1.7e-19 BIRD-IDD transcription factor, fourth C2HC zinc finger
KIX_2 PF16987 398 - 474 7.7e-28 KIX domain
KIX_2 PF16987 559 - 635 4.1e-28 KIX domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000315)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15790 AT1G15790 AT1G15790 AT1G15790 AT1G15790
fragaria_vesca FvH4_3g12350 FvH4_3g37483 FvH4_3g42320 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42361
malus_domestica MD03G1031600.v1.1 MD03G1031700.v1.1 MD03G1033500.v1.1 MD07G1261500.v1.1 MD11G1035800.v1.1
prunus_persica Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1
pyrus_communis pycom03g02570 pycom03g02580
rosa_chinensis RchiOBHm_Chr4g0419101 RchiOBHm_Chr5g0075711 RchiOBHm_Chr5g0075731 RchiOBHm_Chr5g0075781 RchiOBHm_Chr5g0075801 RchiOBHm_Chr5g0075811 RchiOBHm_Chr5g0075831 RchiOBHm_Chr5g0075841 RchiOBHm_Chr5g0075851 RchiOBHm_Chr5g0075861
rosa_laevigata RLG00000029834 RLG00000036588 RLG00000036591 RLG00000036592 RLG00000036594 RLG00000036595 RLG00000036597 RLG00000036647
rosa_multiflora Rmu_co8127406.1_g000001 Rmu_co8138284.1_g000001 Rmu_sc0002101.1_g000001 Rmu_sc0002101.1_g000006 Rmu_sc0002652.1_g000027 Rmu_sc0002652.1_g000029 Rmu_sc0008562.1_g000002 Rmu_sc0019599.1_g000001 Rmu_sc0019861.1_g000005 Rmu_sc0029317.1_g000001 Rmu_sc0031378.1_g000001 Rmu_ssc0000402.1_g000001
rosa_roxburghii Rroxscaffold_1G00005820 Rroxscaffold_1G00005830 Rroxscaffold_1G00005840 Rroxscaffold_1G00005850 Rroxscaffold_1G00005860 Rroxscaffold_1G00005870 Rroxscaffold_1G00005890 Rroxscaffold_5G00340930 Rroxscaffold_5G00343250 Rroxscaffold_5G00369260
rosa_rugosa Rorug05G0442200 Rorug05G0442300.1 Rorug05G0442400 Rorug05G0442500 Rorug05G0442600 Rorug05G0442700 Rorug05G0442900
rosa_samantha Rh1AG189900 Rh2DG257500 Rh5AG498900 Rh5AG499100 Rh5AG499400 Rh5AG499500 Rh5AG499600 Rh5AG499700 Rh5AG499900 Rh5AG506800 Rh5BG519900 Rh5BG520100 Rh5BG520400 Rh5BG520500 Rh5BG520600 Rh5BG520800 Rh5BG520900 Rh5BG521100 Rh5CG543900 Rh5CG544100 Rh5CG544400 Rh5CG544500 Rh5CG544600 Rh5CG544800 Rh5CG544900 Rh5CG545000 Rh5CG545200 Rh5DG532700 Rh5DG533100 Rh5DG533200 Rh5DG533400 Rh5DG533500 Rh5DG533600 Rh5DG533700
rosa_wichuraiana Rw5G046310 Rw5G046340 Rw5G046350 Rw5G046360 Rw5G046370 Rw5G046380 Rw5G046400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 4 cut(s) 400, 1528, 1687, 2011
Acc36I ACCTGC 4 cut(s) 400, 1528, 1687, 2011
AccB1I GGYRCC 1 cut(s) 1686
AccB7I CCANNNNNTGG 3 cut(s) 395, 1523, 2006
AccII CGCG 3 cut(s) 88, 1225, 1708
AcoI YGGCCR 3 cut(s) 288, 1416, 1899
AcsI RAATTY 6 cut(s) 240, 406, 1368, 1534, 1851, 2017
AcuI CTGAAG 6 cut(s) 269, 684, 742, 1004, 1052, 2228
AfaI GTAC 1 cut(s) 978
AjnI CCWGG 2 cut(s) 611, 2272
AjuI GAANNNNNNNTTGG 2 cut(s) 2160, 2192
AluBI AGCT 5 cut(s) 453, 624, 641, 720, 1040
AluI AGCT 5 cut(s) 453, 624, 641, 720, 1040
Alw26I GTCTC 7 cut(s) 279, 1188, 1388, 1407, 1871, 1890, 2282
Ama87I CYCGRG 2 cut(s) 2186, 2315
AoxI GGCC 6 cut(s) 288, 1416, 1574, 1899, 2057, 2236
ApeKI GCWGC 8 cut(s) 209, 838, 859, 922, 925, 1337, 1820, 2310
ApoI RAATTY 6 cut(s) 240, 406, 1368, 1534, 1851, 2017
AseI ATTAAT 3 cut(s) 708, 1610, 2111
Asp700I GAANNNNTTC 3 cut(s) 495, 894, 1005
AspS9I GGNCC 2 cut(s) 1574, 2057
AsuC2I CCSGG 2 cut(s) 1573, 2056
AsuHPI GGTGA 5 cut(s) 334, 1295, 1462, 1945, 2264
AsuII TTCGAA 1 cut(s) 898
AvaI CYCGRG 2 cut(s) 2186, 2315
BalI TGGCCA 3 cut(s) 290, 1418, 1901
BanI GGYRCC 1 cut(s) 1686
BanII GRGCYC 1 cut(s) 450
BbsI GAAGAC 3 cut(s) 312, 1440, 1923
BbvI GCAGC 8 cut(s) 196, 850, 871, 934, 937, 1324, 1807, 2297
BccI CCATC 6 cut(s) 8, 1132, 1615, 2130, 2243, 2310
BcgI CGANNNNNNTGC 2 cut(s) 706, 740
BciT130I CCWGG 2 cut(s) 613, 2274
BciVI GTATCC 2 cut(s) 109, 1729
BclI TGATCA 1 cut(s) 2227
BcnI CCSGG 2 cut(s) 1573, 2056
BcoDI GTCTC 7 cut(s) 279, 1188, 1388, 1407, 1871, 1890, 2282
BfaI CTAG 5 cut(s) 477, 512, 576, 764, 1935
BfmI CTRYAG 3 cut(s) 74, 993, 1012
BfuAI ACCTGC 4 cut(s) 400, 1528, 1687, 2011
BfuI GTATCC 2 cut(s) 109, 1729
BlpI GCTNAGC 1 cut(s) 449
Bme1390I CCNGG 4 cut(s) 613, 1573, 2056, 2274
BmeT110I CYCGRG 2 cut(s) 2186, 2315
BmgT120I GGNCC 2 cut(s) 1574, 2057
BmiI GGNNCC 2 cut(s) 1205, 1688
BmrFI CCNGG 4 cut(s) 613, 1573, 2056, 2274
BmrI ACTGGG 1 cut(s) 1042
BmuI ACTGGG 1 cut(s) 1042
BpiI GAAGAC 3 cut(s) 312, 1440, 1923
BplI GAGNNNNNCTC 4 cut(s) 1147, 1179, 1630, 1662
BpmI CTGGAG 4 cut(s) 417, 1219, 1545, 2028
Bpu1102I GCTNAGC 1 cut(s) 449
Bpu14I TTCGAA 1 cut(s) 898
BpuEI CTTGAG 9 cut(s) 152, 321, 1149, 1280, 1449, 1632, 1763, 1932, 2147
BpuMI CCSGG 2 cut(s) 1573, 2056
BsaI GGTCTC 3 cut(s) 1388, 1871, 2282
BsaJI CCNNGG 3 cut(s) 2263, 2272, 2281
BsaWI WCCGGW 1 cut(s) 143
BsaXI ACNNNNNCTCC 6 cut(s) 257, 287, 1385, 1415, 1868, 1898
Bse118I RCCGGY 2 cut(s) 1541, 2024
Bse1I ACTGG 6 cut(s) 538, 1048, 1202, 1473, 1956, 2293
Bse3DI GCAATG 4 cut(s) 51, 1086, 1188, 1671
BseBI CCWGG 2 cut(s) 613, 2274
BseDI CCNNGG 3 cut(s) 2263, 2272, 2281
BseGI GGATG 5 cut(s) 55, 1192, 1675, 2118, 2302
BseMI GCAATG 4 cut(s) 51, 1086, 1188, 1671
BseMII CTCAG 6 cut(s) 290, 463, 884, 977, 1418, 1901
BseNI ACTGG 6 cut(s) 538, 1048, 1202, 1473, 1956, 2293
BseRI GAGGAG 4 cut(s) 1152, 1216, 1635, 2141
BseXI GCAGC 8 cut(s) 196, 850, 871, 934, 937, 1324, 1807, 2297
BseYI CCCAGC 3 cut(s) 314, 1442, 1925
BsgI GTGCAG 3 cut(s) 411, 1539, 2022
Bsh1236I CGCG 3 cut(s) 88, 1225, 1708
BshFI GGCC 6 cut(s) 290, 1418, 1576, 1901, 2059, 2238
BshNI GGYRCC 1 cut(s) 1686
BsiHKCI CYCGRG 2 cut(s) 2186, 2315
BsiSI CCGG 6 cut(s) 144, 728, 1542, 1572, 2025, 2055
BslFI GGGAC 1 cut(s) 2255
BsmAI GTCTC 7 cut(s) 279, 1188, 1388, 1407, 1871, 1890, 2282
BsmFI GGGAC 1 cut(s) 2255
BsnI GGCC 6 cut(s) 290, 1418, 1576, 1901, 2059, 2238
Bso31I GGTCTC 3 cut(s) 1388, 1871, 2282
BsoBI CYCGRG 2 cut(s) 2186, 2315
Bsp119I TTCGAA 1 cut(s) 898
Bsp1286I GDGCHC 1 cut(s) 450
Bsp1407I TGTACA 1 cut(s) 976
Bsp143I GATC 2 cut(s) 267, 2227
Bsp1720I GCTNAGC 1 cut(s) 449
BspANI GGCC 6 cut(s) 290, 1418, 1576, 1901, 2059, 2238
BspCNI CTCAG 6 cut(s) 289, 462, 883, 976, 1417, 1900
BspFNI CGCG 3 cut(s) 88, 1225, 1708
BspLI GGNNCC 2 cut(s) 1205, 1688
BspMAI CTGCAG 2 cut(s) 78, 997
BspMI ACCTGC 4 cut(s) 400, 1528, 1687, 2011
BspT104I TTCGAA 1 cut(s) 898
BspT107I GGYRCC 1 cut(s) 1686
BspTNI GGTCTC 3 cut(s) 1388, 1871, 2282
BsrDI GCAATG 4 cut(s) 51, 1086, 1188, 1671
BsrFI RCCGGY 2 cut(s) 1541, 2024
BsrGI TGTACA 1 cut(s) 976
BsrI ACTGG 6 cut(s) 538, 1048, 1202, 1473, 1956, 2293
BssAI RCCGGY 2 cut(s) 1541, 2024
BssECI CCNNGG 3 cut(s) 2263, 2272, 2281
BssMI GATC 2 cut(s) 267, 2227
Bst2UI CCWGG 2 cut(s) 613, 2274
Bst4CI ACNGT 3 cut(s) 32, 596, 1125
Bst6I CTCTTC 3 cut(s) 119, 1256, 1739
BstAPI GCANNNNNTGC 9 cut(s) 50, 567, 931, 992, 1099, 1187, 1670, 2074, 2092
BstAUI TGTACA 1 cut(s) 976
BstBI TTCGAA 1 cut(s) 898
BstC8I GCNNGC 8 cut(s) 42, 78, 415, 1179, 1215, 1543, 1662, 2026
BstDEI CTNAG 6 cut(s) 276, 449, 870, 963, 1404, 1887
BstENI CCTNNNNNAGG 2 cut(s) 1164, 1647
BstF5I GGATG 5 cut(s) 55, 1192, 1675, 2118, 2302
BstFNI CGCG 3 cut(s) 88, 1225, 1708
BstKTI GATC 2 cut(s) 270, 2230
BstMAI GTCTC 7 cut(s) 279, 1188, 1388, 1407, 1871, 1890, 2282
BstMBI GATC 2 cut(s) 267, 2227
BstNI CCWGG 2 cut(s) 613, 2274
BstSCI CCNGG 4 cut(s) 611, 1571, 2054, 2272
BstSFI CTRYAG 3 cut(s) 74, 993, 1012
BstUI CGCG 3 cut(s) 88, 1225, 1708
BstV1I GCAGC 8 cut(s) 196, 850, 871, 934, 937, 1324, 1807, 2297
BstV2I GAAGAC 3 cut(s) 312, 1440, 1923
BsuI GTATCC 2 cut(s) 109, 1729
BsuRI GGCC 6 cut(s) 290, 1418, 1576, 1901, 2059, 2238
BtsCI GGATG 5 cut(s) 55, 1192, 1675, 2118, 2302
BtsI GCAGTG 1 cut(s) 1002
BtsIMutI CAGTG 2 cut(s) 1002, 2300
BveI ACCTGC 4 cut(s) 400, 1528, 1687, 2011
Cac8I GCNNGC 8 cut(s) 42, 78, 415, 1179, 1215, 1543, 1662, 2026
Cfr10I RCCGGY 2 cut(s) 1541, 2024
Cfr13I GGNCC 2 cut(s) 1574, 2057
CseI GACGC 1 cut(s) 539
Csp6I GTAC 1 cut(s) 977
CviAII CATG 5 cut(s) 161, 466, 724, 974, 1063
CviQI GTAC 1 cut(s) 977
DdeI CTNAG 6 cut(s) 276, 449, 870, 963, 1404, 1887
DpnI GATC 2 cut(s) 269, 2229
DpnII GATC 2 cut(s) 267, 2227
EaeI YGGCCR 3 cut(s) 288, 1416, 1899
Eam1104I CTCTTC 3 cut(s) 119, 1256, 1739
EarI CTCTTC 3 cut(s) 119, 1256, 1739
EciI GGCGGA 1 cut(s) 95
Eco24I GRGCYC 1 cut(s) 450
Eco31I GGTCTC 3 cut(s) 1388, 1871, 2282
Eco57I CTGAAG 6 cut(s) 269, 684, 742, 1004, 1052, 2228
Eco88I CYCGRG 2 cut(s) 2186, 2315
EcoNI CCTNNNNNAGG 2 cut(s) 1164, 1647
EcoRII CCWGG 2 cut(s) 611, 2272
EcoT22I ATGCAT 1 cut(s) 655
EcoT38I GRGCYC 1 cut(s) 450
FaeI CATG 5 cut(s) 164, 469, 727, 977, 1066
FaqI GGGAC 1 cut(s) 2255
FatI CATG 5 cut(s) 160, 465, 723, 973, 1062
FauI CCCGC 1 cut(s) 563
FbaI TGATCA 1 cut(s) 2227
FokI GGATG 5 cut(s) 62, 1199, 1682, 2105, 2289
FriOI GRGCYC 1 cut(s) 450
FspBI CTAG 5 cut(s) 477, 512, 576, 764, 1935
GsaI CCCAGC 3 cut(s) 318, 1446, 1929
GsuI CTGGAG 4 cut(s) 417, 1219, 1545, 2028
HaeIII GGCC 6 cut(s) 290, 1418, 1576, 1901, 2059, 2238
HapII CCGG 6 cut(s) 144, 728, 1542, 1572, 2025, 2055
HgaI GACGC 1 cut(s) 539
Hin1II CATG 5 cut(s) 164, 469, 727, 977, 1066
HincII GTYRAC 3 cut(s) 1053, 1128, 2200
HindII GTYRAC 3 cut(s) 1053, 1128, 2200
HpaI GTTAAC 1 cut(s) 1128
HpaII CCGG 6 cut(s) 144, 728, 1542, 1572, 2025, 2055
HphI GGTGA 5 cut(s) 334, 1295, 1462, 1945, 2264
Hpy166II GTNNAC 4 cut(s) 1053, 1128, 2147, 2200
Hpy188III TCNNGA 6 cut(s) 149, 169, 764, 1297, 1780, 2126
Hpy8I GTNNAC 4 cut(s) 1053, 1128, 2147, 2200
HpyAV CCTTC 5 cut(s) 520, 544, 766, 2213, 2249
HpyCH4III ACNGT 3 cut(s) 32, 596, 1125
HpyCH4IV ACGT 1 cut(s) 2232
HpyF3I CTNAG 6 cut(s) 276, 449, 870, 963, 1404, 1887
HpySE526I ACGT 1 cut(s) 2232
Hsp92II CATG 5 cut(s) 164, 469, 727, 977, 1066
KroI GCCGGC 2 cut(s) 1541, 2024
KroNI GCCGGC 2 cut(s) 1543, 2026
Ksp22I TGATCA 1 cut(s) 2227
KspAI GTTAAC 1 cut(s) 1128
Kzo9I GATC 2 cut(s) 267, 2227
LmnI GCTCC 1 cut(s) 1203
Lsp1109I GCAGC 8 cut(s) 196, 850, 871, 934, 937, 1324, 1807, 2297
MaeI CTAG 5 cut(s) 477, 512, 576, 764, 1935
MaeII ACGT 1 cut(s) 2232
MaeIII GTNAC 9 cut(s) 340, 380, 590, 1468, 1508, 1951, 1991, 2219, 2252
MalI GATC 2 cut(s) 269, 2229
MboI GATC 2 cut(s) 267, 2227
MfeI CAATTG 1 cut(s) 1691
MhlI GDGCHC 1 cut(s) 450
MlsI TGGCCA 3 cut(s) 290, 1418, 1901
MluNI TGGCCA 3 cut(s) 290, 1418, 1901
MlyI GAGTC 5 cut(s) 28, 725, 1165, 1648, 2142
MmeI TCCRAC 4 cut(s) 330, 931, 1458, 1941
Mox20I TGGCCA 3 cut(s) 290, 1418, 1901
Mph1103I ATGCAT 1 cut(s) 655
MroNI GCCGGC 2 cut(s) 1541, 2024
MroXI GAANNNNTTC 3 cut(s) 495, 894, 1005
MscI TGGCCA 3 cut(s) 290, 1418, 1901
MseI TTAA 6 cut(s) 708, 1127, 1247, 1610, 1725, 2111
Msp20I TGGCCA 3 cut(s) 290, 1418, 1901
MspA1I CMGCKG 1 cut(s) 862
MspI CCGG 6 cut(s) 144, 728, 1542, 1572, 2025, 2055
MspR9I CCNGG 4 cut(s) 613, 1573, 2056, 2274
MunI CAATTG 1 cut(s) 1691
MvaI CCWGG 2 cut(s) 613, 2274
MvnI CGCG 3 cut(s) 88, 1225, 1708
NaeI GCCGGC 2 cut(s) 1543, 2026
NciI CCSGG 2 cut(s) 1573, 2056
NdeII GATC 2 cut(s) 267, 2227
NgoMIV GCCGGC 2 cut(s) 1541, 2024
NlaIII CATG 5 cut(s) 164, 469, 727, 977, 1066
NlaIV GGNNCC 2 cut(s) 1205, 1688
NmuCI GTSAC 6 cut(s) 340, 590, 1468, 1951, 2219, 2252
NsiI ATGCAT 1 cut(s) 655
NspV TTCGAA 1 cut(s) 898
PaeR7I CTCGAG 1 cut(s) 2315
PaqCI CACCTGC 4 cut(s) 400, 1528, 1687, 2011
PdiI GCCGGC 2 cut(s) 1543, 2026
PdmI GAANNNNTTC 3 cut(s) 495, 894, 1005
PfeI GAWTC 6 cut(s) 83, 1001, 1027, 1220, 1703, 2131
PflFI GACNNNGTC 4 cut(s) 533, 1399, 1882, 2258
PflMI CCANNNNNTGG 3 cut(s) 395, 1523, 2006
PfoI TCCNGGA 1 cut(s) 611
PleI GAGTC 5 cut(s) 27, 725, 1164, 1647, 2142
PpsI GAGTC 5 cut(s) 27, 725, 1164, 1647, 2142
PshBI ATTAAT 3 cut(s) 708, 1610, 2111
Psp6I CCWGG 2 cut(s) 611, 2272
PspFI CCCAGC 3 cut(s) 314, 1442, 1925
PspGI CCWGG 2 cut(s) 611, 2272
PspN4I GGNNCC 2 cut(s) 1205, 1688
PspPI GGNCC 2 cut(s) 1574, 2057
PspXI VCTCGAGB 1 cut(s) 2315
PstI CTGCAG 2 cut(s) 78, 997
PsyI GACNNNGTC 4 cut(s) 533, 1399, 1882, 2258
RsaI GTAC 1 cut(s) 978
RsaNI GTAC 1 cut(s) 977
SaqAI TTAA 6 cut(s) 708, 1127, 1247, 1610, 1725, 2111
Sau3AI GATC 2 cut(s) 267, 2227
Sau96I GGNCC 2 cut(s) 1574, 2057
SchI GAGTC 5 cut(s) 28, 725, 1165, 1648, 2142
ScrFI CCNGG 4 cut(s) 613, 1573, 2056, 2274
SduI GDGCHC 1 cut(s) 450
SfcI CTRYAG 3 cut(s) 74, 993, 1012
Sfr274I CTCGAG 1 cut(s) 2315
SfuI TTCGAA 1 cut(s) 898
SlaI CTCGAG 1 cut(s) 2315
SspI AATATT 5 cut(s) 712, 1098, 1590, 2073, 2091
SspMI CTAG 5 cut(s) 477, 512, 576, 764, 1935
StyD4I CCNGG 4 cut(s) 611, 1571, 2054, 2272
TaaI ACNGT 3 cut(s) 32, 596, 1125
TaiI ACGT 1 cut(s) 2235
TaqI TCGA 6 cut(s) 189, 521, 898, 1364, 1847, 2316
TatI WGTACW 1 cut(s) 976
TauI GCSGC 6 cut(s) 91, 662, 1105, 1228, 1711, 2301
TfiI GAWTC 6 cut(s) 83, 1001, 1027, 1220, 1703, 2131
Tru1I TTAA 6 cut(s) 708, 1127, 1247, 1610, 1725, 2111
Tru9I TTAA 6 cut(s) 708, 1127, 1247, 1610, 1725, 2111
TscAI CASTG 2 cut(s) 1002, 2300
TseFI GTSAC 6 cut(s) 340, 590, 1468, 1951, 2219, 2252
TseI GCWGC 8 cut(s) 209, 838, 859, 922, 925, 1337, 1820, 2310
Tsp45I GTSAC 6 cut(s) 340, 590, 1468, 1951, 2219, 2252
TspDTI ATGAA 8 cut(s) 177, 471, 482, 616, 712, 1305, 1782, 1788
TspGWI ACGGA 3 cut(s) 250, 2144, 2313
TspRI CASTG 2 cut(s) 1002, 2300
Tth111I GACNNNGTC 4 cut(s) 533, 1399, 1882, 2258
Van91I CCANNNNNTGG 3 cut(s) 395, 1523, 2006
VspI ATTAAT 3 cut(s) 708, 1610, 2111
XagI CCTNNNNNAGG 2 cut(s) 1164, 1647
XapI RAATTY 6 cut(s) 240, 406, 1368, 1534, 1851, 2017
XbaI TCTAGA 1 cut(s) 763
XhoI CTCGAG 1 cut(s) 2315
XmnI GAANNNNTTC 3 cut(s) 495, 894, 1005
XspI CTAG 5 cut(s) 477, 512, 576, 764, 1935
Zsp2I ATGCAT 1 cut(s) 655
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.