RLG00000036592

Mediator of RNA polymerase II transcription subunit 15a-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000315
Physical Location & Seq
Forward (+)
82264796 .. 82268220
3425 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036592

Sequence Viewer

Length: 1710 bp
ATGAGTGAGCAAAGCCAGTCTTCTTCTTGTTCCCCAGACGAGAATCGGCAATTTCCTGATCACTGTTTTAAAACCCTTCTCCCATCTTCACAATCCCTCAAAGAGAAGAAAGGTTTAATGGATAACAACAATGGCAGTCCTCCTCAAGATGGACAGCCCTCAATGGAAGCAGGAGATTGGAGGAGCAATATGCCCACGGATATGCGGCAAAGACTTATCAATAAGATAATGTCTACATTGAAGGCGCATCGCCCCATTTCTGGTCAAGAGGGATTAGATGAACTCGAGAAAAATGCTGTAAGTCTGGAGGAAAAGATTTATGCTGCTGCCACTAGCCAGTTGGACTATCTCTGGAAAATTTCTCAGGAGATGCTCACAGTTGTGACCAAGCCACAGAATACAACATCCAATCCTCTAGAATCCAATGGCAAGGGACCTCTCGATTCAGTTGCTGATCAAGGACAATCAGTCTCAATGTCATTGCCAGCCAATCAGTCCCAAACAAGGCAACATTTTGTACCACAGAACATACAGAATAACATTCTGCCTGCCGGAGTTGGAAGTTATGCTGGGTTGTCATCTGGACTTTCTCCTACCATAAACTATCAAACAAGGGAACAATTTGTACCGCAAAATATTCAGAAGAGCATTCTAACTGCTGGAGTTCAAAGTTCTGTTGGCTTATCATCTGCACTATCTCCTACCGGGATCTATCATCCGTATTGCCTCCAACCCCCTGCCCCTGGTCAAAATATTCCCAGCTTATCATATGCACTGCCTCCTCCACAGGGTCTGAATATGTCATCTGCACTACTTGCCTCTATTCCGTCTGGCTTTTCTTCTGCTCCAGCATCTATTATGCGACCTTCCACACTGCAGTCATCTCTCCCTAGGCTTCAGCAGAATCAACAATCAACTATTCCCCACTCTTCACAATCCATGCTTCAGCAAACAGCAGTGCCACAACAGCAAATATTGCCCCAACAGCATCAACAGCAACAGTTAACAGGGTCTTCAACAGCTCAGCAGAACAAGAAGAATCCATCGCAGTCGATTGCAGAGCTGTTAACCACAATAAAGAACTCAGAGCAGCAGGTCCCTATGGGCTCTATTCAACAAACTCCGGTCAGTGCTCCCCAGCAAGCTAACATGAATGTACAGAGTGGGATTAACACATTGCACCCAAACGTTATTCCACTTGGTATTCTTCAGAACCAACAACAATATCGGAATCAACTTCAGCAACAATATCAAATCCAGGTACTACATCAACAGCGTCAACAGCTGCAGTTGATGCAGATGCAGCAGATAAATCAACAACTGCAACAGCAGCTGGCTAGACAGTCGCAGACACAGCAAATGCCACAGCTTCACCAAATCAGAGTTGTTGACGCGAACATGAATGCCTCGTCATCACAGAGTGGGAGTAATATGCTGCAGGCGCACATTGTTTCTCCTCCGCCGAATTCTGGTATTGTTGATAACCAGCATCTGAAGCAAGAACAGAAGCAGAAAATGTTTAAGAATCAACTCCAGCAACCATATCAAGAGCTACAGATGCAGAAGCCGCAGATGCTTCAAGAAAAGCAACAGCAAAAGATACGGCAACTAGAGCAACAAACAAAGCAGCAGCTGTGTCACATTTATATCATTTATCTCATCTTTCTCACCTTTCTGATGGGTGCTCTCTTCTTCGGGACAGGCCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KIX_2

Protein Analysis

570

Amino Acids

63.24

Weight (kDa)

9.09

Isoelectric Point (pI)

79.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIX_2 PF16987 58 - 137 3.8e-23 KIX domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000315)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15790 AT1G15790 AT1G15790 AT1G15790 AT1G15790
fragaria_vesca FvH4_3g12350 FvH4_3g37483 FvH4_3g42320 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42361
malus_domestica MD03G1031600.v1.1 MD03G1031700.v1.1 MD03G1033500.v1.1 MD07G1261500.v1.1 MD11G1035800.v1.1
prunus_persica Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1
pyrus_communis pycom03g02570 pycom03g02580
rosa_chinensis RchiOBHm_Chr4g0419101 RchiOBHm_Chr5g0075711 RchiOBHm_Chr5g0075731 RchiOBHm_Chr5g0075781 RchiOBHm_Chr5g0075801 RchiOBHm_Chr5g0075811 RchiOBHm_Chr5g0075831 RchiOBHm_Chr5g0075841 RchiOBHm_Chr5g0075851 RchiOBHm_Chr5g0075861
rosa_laevigata RLG00000029834 RLG00000036588 RLG00000036591 RLG00000036592 RLG00000036594 RLG00000036595 RLG00000036597 RLG00000036647
rosa_multiflora Rmu_co8127406.1_g000001 Rmu_co8138284.1_g000001 Rmu_sc0002101.1_g000001 Rmu_sc0002101.1_g000006 Rmu_sc0002652.1_g000027 Rmu_sc0002652.1_g000029 Rmu_sc0008562.1_g000002 Rmu_sc0019599.1_g000001 Rmu_sc0019861.1_g000005 Rmu_sc0029317.1_g000001 Rmu_sc0031378.1_g000001 Rmu_ssc0000402.1_g000001
rosa_roxburghii Rroxscaffold_1G00005820 Rroxscaffold_1G00005830 Rroxscaffold_1G00005840 Rroxscaffold_1G00005850 Rroxscaffold_1G00005860 Rroxscaffold_1G00005870 Rroxscaffold_1G00005890 Rroxscaffold_5G00340930 Rroxscaffold_5G00343250 Rroxscaffold_5G00369260
rosa_rugosa Rorug05G0442200 Rorug05G0442300.1 Rorug05G0442400 Rorug05G0442500 Rorug05G0442600 Rorug05G0442700 Rorug05G0442900
rosa_samantha Rh1AG189900 Rh2DG257500 Rh5AG498900 Rh5AG499100 Rh5AG499400 Rh5AG499500 Rh5AG499600 Rh5AG499700 Rh5AG499900 Rh5AG506800 Rh5BG519900 Rh5BG520100 Rh5BG520400 Rh5BG520500 Rh5BG520600 Rh5BG520800 Rh5BG520900 Rh5BG521100 Rh5CG543900 Rh5CG544100 Rh5CG544400 Rh5CG544500 Rh5CG544600 Rh5CG544800 Rh5CG544900 Rh5CG545000 Rh5CG545200 Rh5DG532700 Rh5DG533100 Rh5DG533200 Rh5DG533400 Rh5DG533500 Rh5DG533600 Rh5DG533700
rosa_wichuraiana Rw5G046310 Rw5G046340 Rw5G046350 Rw5G046360 Rw5G046370 Rw5G046380 Rw5G046400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1084
AccI GTMKAC 1 cut(s) 233
AccII CGCG 1 cut(s) 1394
AciI CCGC 4 cut(s) 205, 629, 1460, 1568
AclI AACGTT 1 cut(s) 1188
AclWI GGATC 1 cut(s) 716
AcsI RAATTY 2 cut(s) 357, 1465
AcuI CTGAAG 5 cut(s) 881, 929, 1193, 1223, 1514
AdeI CACNNNGTG 1 cut(s) 1421
AfaI GTAC 4 cut(s) 519, 627, 1158, 1263
AfiI CCNNNNNNNGG 6 cut(s) 149, 260, 504, 743, 788, 1469
AgsI TTSAA 5 cut(s) 241, 668, 1017, 1115, 1580
AhdI GACNNNNNGTC 1 cut(s) 467
AjnI CCWGG 2 cut(s) 742, 1257
AleI CACNNNNGTG 1 cut(s) 380
AluBI AGCT 9 cut(s) 762, 1022, 1063, 1145, 1285, 1333, 1369, 1552, 1633
AluI AGCT 9 cut(s) 762, 1022, 1063, 1145, 1285, 1333, 1369, 1552, 1633
Alw21I GWGCWC 2 cut(s) 1135, 1687
Alw26I GTCTC 1 cut(s) 475
AlwI GGATC 1 cut(s) 716
AlwNI CAGNNNCTG 5 cut(s) 452, 793, 1333, 1492, 1633
Ama87I CYCGRG 1 cut(s) 284
AoxI GGCC 1 cut(s) 1702
ApeKI GCWGC 9 cut(s) 323, 326, 1090, 1285, 1303, 1330, 1435, 1627, 1630
ApoI RAATTY 2 cut(s) 357, 1465
AspA2I CCTAGG 1 cut(s) 890
AspLEI GCGC 2 cut(s) 247, 1444
AspS9I GGNCC 2 cut(s) 434, 1096
AsuC2I CCSGG 1 cut(s) 706
AsuHPI GGTGA 2 cut(s) 1364, 1660
AvaI CYCGRG 1 cut(s) 284
AvaII GGWCC 2 cut(s) 434, 1096
AvrII CCTAGG 1 cut(s) 890
BanII GRGCYC 1 cut(s) 1109
BbsI GAAGAC 2 cut(s) 12, 1005
Bbv12I GWGCWC 2 cut(s) 1135, 1687
BbvI GCAGC 9 cut(s) 310, 313, 1102, 1272, 1315, 1342, 1422, 1639, 1642
BccI CCATC 4 cut(s) 91, 143, 1051, 1672
BceAI ACGGC 1 cut(s) 1619
BcgI CGANNNNNNTGC 4 cut(s) 275, 309, 431, 465
BciT130I CCWGG 2 cut(s) 744, 1259
BclI TGATCA 2 cut(s) 58, 454
BcnI CCSGG 1 cut(s) 706
BcoDI GTCTC 1 cut(s) 475
BfaI CTAG 5 cut(s) 333, 416, 891, 1338, 1610
BfmI CTRYAG 4 cut(s) 875, 1286, 1436, 1553
BfuAI ACCTGC 1 cut(s) 1084
BlnI CCTAGG 1 cut(s) 890
BlpI GCTNAGC 1 cut(s) 1023
Bme1390I CCNGG 3 cut(s) 706, 744, 1259
Bme18I GGWCC 2 cut(s) 434, 1096
BmeRI GACNNNNNGTC 1 cut(s) 467
BmeT110I CYCGRG 1 cut(s) 284
BmgT120I GGNCC 2 cut(s) 434, 1096
BmiI GGNNCC 2 cut(s) 435, 1098
BmrFI CCNGG 3 cut(s) 706, 744, 1259
BmsI GCATC 9 cut(s) 256, 360, 860, 997, 1284, 1290, 1498, 1548, 1563
BpiI GAAGAC 2 cut(s) 12, 1005
BpmI CTGGAG 4 cut(s) 326, 681, 831, 1517
Bpu1102I GCTNAGC 1 cut(s) 1023
BpuEI CTTGAG 1 cut(s) 129
BpuMI CCSGG 1 cut(s) 706
BsaJI CCNNGG 3 cut(s) 195, 742, 890
BsaWI WCCGGW 1 cut(s) 1123
Bsc4I CCNNNNNNNGG 6 cut(s) 149, 260, 504, 743, 788, 1469
Bse1I ACTGG 2 cut(s) 16, 337
Bse3DI GCAATG 2 cut(s) 479, 1175
BseBI CCWGG 2 cut(s) 744, 1259
BseDI CCNNGG 3 cut(s) 195, 742, 890
BseGI GGATG 2 cut(s) 404, 715
BseLI CCNNNNNNNGG 6 cut(s) 149, 260, 504, 743, 788, 1469
BseMI GCAATG 2 cut(s) 479, 1175
BseMII CTCAG 3 cut(s) 377, 1037, 1098
BseNI ACTGG 2 cut(s) 16, 337
BseRI GAGGAG 4 cut(s) 132, 196, 771, 1446
BseXI GCAGC 9 cut(s) 310, 313, 1102, 1272, 1315, 1342, 1422, 1639, 1642
BseYI CCCAGC 3 cut(s) 569, 758, 1137
BsgI GTGCAG 2 cut(s) 675, 792
Bsh1236I CGCG 1 cut(s) 1394
BshFI GGCC 1 cut(s) 1704
BsiHKAI GWGCWC 2 cut(s) 1135, 1687
BsiHKCI CYCGRG 1 cut(s) 284
BsiSI CCGG 3 cut(s) 552, 705, 1124
BslFI GGGAC 3 cut(s) 447, 481, 1082
BslI CCNNNNNNNGG 6 cut(s) 149, 260, 504, 743, 788, 1469
BsmAI GTCTC 1 cut(s) 475
BsmFI GGGAC 3 cut(s) 447, 481, 1082
BsmI GAATGC 2 cut(s) 648, 1408
BsnI GGCC 1 cut(s) 1704
BsoBI CYCGRG 1 cut(s) 284
Bsp1286I GDGCHC 3 cut(s) 1109, 1135, 1687
Bsp1407I TGTACA 1 cut(s) 1156
Bsp143I GATC 3 cut(s) 58, 454, 708
Bsp1720I GCTNAGC 1 cut(s) 1023
BspACI CCGC 4 cut(s) 205, 629, 1460, 1568
BspANI GGCC 1 cut(s) 1704
BspCNI CTCAG 3 cut(s) 376, 1036, 1097
BspFNI CGCG 1 cut(s) 1394
BspLI GGNNCC 2 cut(s) 435, 1098
BspMAI CTGCAG 3 cut(s) 879, 1290, 1440
BspMI ACCTGC 1 cut(s) 1084
BspPI GGATC 1 cut(s) 716
BspQI GCTCTTC 1 cut(s) 638
BsrDI GCAATG 2 cut(s) 479, 1175
BsrGI TGTACA 1 cut(s) 1156
BsrI ACTGG 2 cut(s) 16, 337
BssECI CCNNGG 3 cut(s) 195, 742, 890
BssMI GATC 3 cut(s) 58, 454, 708
BssT1I CCWWGG 1 cut(s) 890
Bst2UI CCWGG 2 cut(s) 744, 1259
Bst4CI ACNGT 4 cut(s) 65, 379, 1002, 1344
Bst6I CTCTTC 3 cut(s) 638, 934, 1694
BstAPI GCANNNNNTGC 3 cut(s) 815, 976, 1294
BstAUI TGTACA 1 cut(s) 1156
BstC8I GCNNGC 5 cut(s) 486, 549, 1143, 1335, 1440
BstDEI CTNAG 3 cut(s) 363, 1023, 1084
BstDSI CCRYGG 1 cut(s) 195
BstF5I GGATG 2 cut(s) 404, 715
BstFNI CGCG 1 cut(s) 1394
BstHHI GCGC 2 cut(s) 247, 1444
BstKTI GATC 3 cut(s) 61, 457, 711
BstMAI GTCTC 1 cut(s) 475
BstMBI GATC 3 cut(s) 58, 454, 708
BstNI CCWGG 2 cut(s) 744, 1259
BstSCI CCNGG 3 cut(s) 704, 742, 1257
BstSFI CTRYAG 4 cut(s) 875, 1286, 1436, 1553
BstUI CGCG 1 cut(s) 1394
BstV1I GCAGC 9 cut(s) 310, 313, 1102, 1272, 1315, 1342, 1422, 1639, 1642
BstV2I GAAGAC 2 cut(s) 12, 1005
BstX2I RGATCY 1 cut(s) 708
BstYI RGATCY 1 cut(s) 708
BsuRI GGCC 1 cut(s) 1704
BtgI CCRYGG 1 cut(s) 195
BtgZI GCGATG 2 cut(s) 233, 1029
BtsCI GGATG 2 cut(s) 404, 715
BtsI GCAGTG 3 cut(s) 773, 872, 963
BtsIMutI CAGTG 5 cut(s) 61, 773, 872, 963, 1135
BveI ACCTGC 1 cut(s) 1084
Cac8I GCNNGC 5 cut(s) 486, 549, 1143, 1335, 1440
CaiI CAGNNNCTG 5 cut(s) 452, 793, 1333, 1492, 1633
CfoI GCGC 2 cut(s) 247, 1444
Cfr13I GGNCC 2 cut(s) 434, 1096
CseI GACGC 2 cut(s) 1265, 1400
Csp6I GTAC 4 cut(s) 518, 626, 1157, 1262
CviAII CATG 3 cut(s) 940, 1150, 1399
CviQI GTAC 4 cut(s) 518, 626, 1157, 1262
DdeI CTNAG 3 cut(s) 363, 1023, 1084
DpnI GATC 3 cut(s) 60, 456, 710
DpnII GATC 3 cut(s) 58, 454, 708
DraI TTTAAA 1 cut(s) 70
DraIII CACNNNGTG 1 cut(s) 1421
DriI GACNNNNNGTC 1 cut(s) 467
Eam1104I CTCTTC 3 cut(s) 638, 934, 1694
Eam1105I GACNNNNNGTC 1 cut(s) 467
EarI CTCTTC 3 cut(s) 638, 934, 1694
EciI GGCGGA 1 cut(s) 1449
Eco130I CCWWGG 1 cut(s) 890
Eco24I GRGCYC 1 cut(s) 1109
Eco47I GGWCC 2 cut(s) 434, 1096
Eco57I CTGAAG 5 cut(s) 881, 929, 1193, 1223, 1514
Eco88I CYCGRG 1 cut(s) 284
EcoO109I RGGNCCY 2 cut(s) 434, 1096
EcoRI GAATTC 1 cut(s) 1465
EcoRII CCWGG 2 cut(s) 742, 1257
EcoT14I CCWWGG 1 cut(s) 890
EcoT38I GRGCYC 1 cut(s) 1109
ErhI CCWWGG 1 cut(s) 890
FaeI CATG 3 cut(s) 943, 1153, 1402
FalI AAGNNNNNCTT 1 cut(s) 36
FaqI GGGAC 3 cut(s) 447, 481, 1082
FatI CATG 3 cut(s) 939, 1149, 1398
FauNDI CATATG 1 cut(s) 769
FbaI TGATCA 2 cut(s) 58, 454
FblI GTMKAC 1 cut(s) 233
FokI GGATG 2 cut(s) 391, 702
FriOI GRGCYC 1 cut(s) 1109
FspBI CTAG 5 cut(s) 333, 416, 891, 1338, 1610
GlaI GCGC 2 cut(s) 246, 1443
GsaI CCCAGC 3 cut(s) 573, 762, 1141
GsuI CTGGAG 4 cut(s) 326, 681, 831, 1517
HaeIII GGCC 1 cut(s) 1704
HapII CCGG 3 cut(s) 552, 705, 1124
HgaI GACGC 2 cut(s) 1265, 1400
HhaI GCGC 2 cut(s) 247, 1444
Hin1II CATG 3 cut(s) 943, 1153, 1402
Hin6I GCGC 2 cut(s) 245, 1442
HinP1I GCGC 2 cut(s) 245, 1442
HincII GTYRAC 4 cut(s) 1005, 1068, 1280, 1390
HindII GTYRAC 4 cut(s) 1005, 1068, 1280, 1390
HinfI GANTC 7 cut(s) 43, 419, 443, 904, 1039, 1231, 1525
HpaI GTTAAC 2 cut(s) 1005, 1068
HpaII CCGG 3 cut(s) 552, 705, 1124
HphI GGTGA 2 cut(s) 1364, 1660
Hpy166II GTNNAC 5 cut(s) 234, 1005, 1068, 1280, 1390
Hpy188I TCNGA 8 cut(s) 642, 795, 1087, 1212, 1230, 1382, 1494, 1677
Hpy8I GTNNAC 5 cut(s) 234, 1005, 1068, 1280, 1390
HpyAV CCTTC 3 cut(s) 86, 235, 876
HpyCH4III ACNGT 4 cut(s) 65, 379, 1002, 1344
HpyCH4IV ACGT 1 cut(s) 1188
HpyF3I CTNAG 3 cut(s) 363, 1023, 1084
HpySE526I ACGT 1 cut(s) 1188
Hsp92II CATG 3 cut(s) 943, 1153, 1402
HspAI GCGC 2 cut(s) 245, 1442
Ksp22I TGATCA 2 cut(s) 58, 454
KspAI GTTAAC 2 cut(s) 1005, 1068
Kzo9I GATC 3 cut(s) 58, 454, 708
LguI GCTCTTC 1 cut(s) 638
LmnI GCTCC 3 cut(s) 183, 850, 1138
Lsp1109I GCAGC 9 cut(s) 310, 313, 1102, 1272, 1315, 1342, 1422, 1639, 1642
LweI GCATC 9 cut(s) 256, 360, 860, 997, 1284, 1290, 1498, 1548, 1563
MaeI CTAG 5 cut(s) 333, 416, 891, 1338, 1610
MaeII ACGT 1 cut(s) 1188
MaeIII GTNAC 2 cut(s) 382, 1637
MalI GATC 3 cut(s) 60, 456, 710
MboI GATC 3 cut(s) 58, 454, 708
MflI RGATCY 1 cut(s) 708
MhlI GDGCHC 3 cut(s) 1109, 1135, 1687
MluCI AATT 4 cut(s) 50, 357, 620, 1465
MmeI TCCRAC 3 cut(s) 321, 538, 754
MseI TTAA 6 cut(s) 69, 116, 1004, 1067, 1170, 1521
MslI CAYNNNNRTG 2 cut(s) 200, 380
MspA1I CMGCKG 3 cut(s) 1285, 1333, 1633
MspI CCGG 3 cut(s) 552, 705, 1124
MspR9I CCNGG 3 cut(s) 706, 744, 1259
Mva1269I GAATGC 2 cut(s) 648, 1408
MvaI CCWGG 2 cut(s) 744, 1259
MvnI CGCG 1 cut(s) 1394
NciI CCSGG 1 cut(s) 706
NdeI CATATG 1 cut(s) 769
NdeII GATC 3 cut(s) 58, 454, 708
NlaIII CATG 3 cut(s) 943, 1153, 1402
NlaIV GGNNCC 2 cut(s) 435, 1098
NmuCI GTSAC 2 cut(s) 382, 1637
OliI CACNNNNGTG 1 cut(s) 380
PaeR7I CTCGAG 1 cut(s) 284
PciSI GCTCTTC 1 cut(s) 638
PctI GAATGC 2 cut(s) 648, 1408
PfeI GAWTC 7 cut(s) 43, 419, 443, 904, 1039, 1231, 1525
PpuMI RGGWCCY 2 cut(s) 434, 1096
Psp1406I AACGTT 1 cut(s) 1188
Psp5II RGGWCCY 2 cut(s) 434, 1096
Psp6I CCWGG 2 cut(s) 742, 1257
PspFI CCCAGC 3 cut(s) 569, 758, 1137
PspGI CCWGG 2 cut(s) 742, 1257
PspN4I GGNNCC 2 cut(s) 435, 1098
PspPI GGNCC 2 cut(s) 434, 1096
PspPPI RGGWCCY 2 cut(s) 434, 1096
PsrI GAACNNNNNNTAC 2 cut(s) 609, 641
PstI CTGCAG 3 cut(s) 879, 1290, 1440
PstNI CAGNNNCTG 5 cut(s) 452, 793, 1333, 1492, 1633
PsuI RGATCY 1 cut(s) 708
PvuII CAGCTG 3 cut(s) 1285, 1333, 1633
RsaI GTAC 4 cut(s) 519, 627, 1158, 1263
RsaNI GTAC 4 cut(s) 518, 626, 1157, 1262
RseI CAYNNNNRTG 2 cut(s) 200, 380
SapI GCTCTTC 1 cut(s) 638
SaqAI TTAA 6 cut(s) 69, 116, 1004, 1067, 1170, 1521
Sau3AI GATC 3 cut(s) 58, 454, 708
Sau96I GGNCC 2 cut(s) 434, 1096
ScrFI CCNGG 3 cut(s) 706, 744, 1259
SduI GDGCHC 3 cut(s) 1109, 1135, 1687
SfaNI GCATC 9 cut(s) 256, 360, 860, 997, 1284, 1290, 1498, 1548, 1563
SfcI CTRYAG 4 cut(s) 875, 1286, 1436, 1553
Sfr274I CTCGAG 1 cut(s) 284
SinI GGWCC 2 cut(s) 434, 1096
SlaI CTCGAG 1 cut(s) 284
SmiMI CAYNNNNRTG 2 cut(s) 200, 380
SmlI CTYRAG 2 cut(s) 144, 284
SmoI CTYRAG 2 cut(s) 144, 284
Sse9I AATT 4 cut(s) 50, 357, 620, 1465
SsiI CCGC 4 cut(s) 205, 629, 1460, 1568
SspI AATATT 3 cut(s) 637, 754, 975
SspMI CTAG 5 cut(s) 333, 416, 891, 1338, 1610
StyD4I CCNGG 3 cut(s) 704, 742, 1257
StyI CCWWGG 1 cut(s) 890
TaaI ACNGT 4 cut(s) 65, 379, 1002, 1344
TaiI ACGT 1 cut(s) 1191
TaqI TCGA 3 cut(s) 285, 441, 1052
TasI AATT 4 cut(s) 50, 357, 620, 1465
TatI WGTACW 1 cut(s) 1156
TauI GCSGC 2 cut(s) 208, 1570
TfiI GAWTC 7 cut(s) 43, 419, 443, 904, 1039, 1231, 1525
Tru1I TTAA 6 cut(s) 69, 116, 1004, 1067, 1170, 1521
Tru9I TTAA 6 cut(s) 69, 116, 1004, 1067, 1170, 1521
TscAI CASTG 5 cut(s) 68, 780, 879, 963, 1135
TseFI GTSAC 2 cut(s) 382, 1637
TseI GCWGC 9 cut(s) 323, 326, 1090, 1285, 1303, 1330, 1435, 1627, 1630
Tsp45I GTSAC 2 cut(s) 382, 1637
TspDTI ATGAA 3 cut(s) 294, 1166, 1415
TspGWI ACGGA 3 cut(s) 212, 708, 816
TspRI CASTG 5 cut(s) 68, 780, 879, 963, 1135
VpaK11BI GGWCC 2 cut(s) 434, 1096
XapI RAATTY 2 cut(s) 357, 1465
XbaI TCTAGA 1 cut(s) 415
XcmI CCANNNNNNNNNTGG 1 cut(s) 337
XhoI CTCGAG 1 cut(s) 284
XmaJI CCTAGG 1 cut(s) 890
XmiI GTMKAC 1 cut(s) 233
XspI CTAG 5 cut(s) 333, 416, 891, 1338, 1610
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.