Rh5AG499500

Mediator of RNA polymerase II transcription subunit 15a-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000315
Physical Location & Seq
Forward (+)
84626432 .. 84634156
7725 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG499500.1

Sequence Viewer

Length: 1614 bp
ATGTTGTTGGGTTGGTTAGGTTTAATGGATAACAACAATGGCATTCCTCCTCAAGATGGACGGCCCTCAATGGAAGCAGGAGATTGGAGGAGCAGAATGCCCACGGATATGCGGCAAAGACTTATCAATAGAATAATGTCTACATTGAAGGCGCATCGCCCCATTTCTGGTCAAGAGGGATTAGATGAACTCGAGGAAAATGCTGTAAGTTTGGAGGAAAAGATTTATGCTGCTGCCACTAGCCAGTTGGACTATCTCTGGAAAATTTCTCAGGAGATGCTCACAGTTGTGACCAAGCCACAGAATACAACATCCAATCCTCTAGAATCCAATGGCAAGGGACCTCTCGATTCAGTTGCTGATCAAGGACAATCAGTCTCAATGTCATTGCCAGCCAATCAGTCCCAAACAAGGCAACATTTCGTACCACAGAACATACAGAATAACATTCTGCCTGCCGGAGTTCAAAGTTATGCTGGGCTGTCATCTGGACTTTCTCCTACCATAAACTATCAAACAAGGGAACAATTTGTACCGCAAAATATTCAGAATAGCATTCTGACTGCTGGAGTTCAAAGTTCTGTTGGCTTATCATCTGCACTATCTCCTACCGGAAACTATCATCTGTATGGCCTCCAACCCCCTGCCCCTGGTCAAAATATTCCCGGCTTATCATATGCACTGCCTCCTCCACAGGGTCTGAATATGTCTGCACTACTTGCTTCTACTCCGTCTGGCTTTTCTTCTGCTCCAGCATCTATTATGCGACCTTCCACACTGCAGTCATCTCTCCCTAGGCTTCAGCAGAATCAACAATCAACTACTCCCCACTCTTCACAATCCATGCTTCAGCAAACAGCAGTGCCACAACAGCAAATGTTGCCCCAACAGCATCAACAGCAACAGTTAACAGGGTCTTCAACAGCTCAGCAGAACAAGAAGACTCCATCGCAGTCGATTGCAGAGCTGTTGACCACAATAAAGAACTCACAGCAGCAGGTCCCTATGGGCTCTATTCAACAGACTCCGGTCAGTGCTTCCCAGCAAGCTAACATGAATGTACAGAGTGGGATTAACACATTGCACCCAAATGTTATTCCACTCGGTATTCTTCAGAACCAACAACAATATCAGAATCAACTTCAGCAACAATATCATATCCAGCTACTACATCAACAGCGTCAACAGCTGCAGTTGATGCAGATGCAGCAGATAAATCAACAACTGCAACAGCAGCTGGCTAGACAGTCGCAGACACACCAAATGCCACAGCTTCACCAAATCAGAGTTGTTGACGCGAACATGAATGCCTCGTCATCACAGAGTGGGAGTAATATGCTGCAGGCAAACATTGTTTCTCCTCTGCCAAACTCTGGTATTGTTGATAACCAGCATCTGAAGCAAGAACAGGAGCAGAAAATGTTTAAGCATCAACCCCAGCAACCATATCAACAGCTACAGATGCAGAAGCCGCAGATGCTTCAAGAAAAGCAACAGCAAAAGATACAGCAACTAGAGCAACAAGCAAAGCAGCAGCTGTGTCATATTTATTTCATTTATCTCATCTTTCTCACCATTCTGATGGGTGCTCTAATCTTCGGGATAGGCCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KIX_2

Protein Analysis

537

Amino Acids

59.68

Weight (kDa)

9.01

Isoelectric Point (pI)

76.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIX_2 PF16987 27 - 106 2.9e-22 KIX domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000315)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15790 AT1G15790 AT1G15790 AT1G15790 AT1G15790
fragaria_vesca FvH4_3g12350 FvH4_3g37483 FvH4_3g42320 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42330 FvH4_3g42361
malus_domestica MD03G1031600.v1.1 MD03G1031700.v1.1 MD03G1033500.v1.1 MD07G1261500.v1.1 MD11G1035800.v1.1
prunus_persica Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1 Prupe.6G027700_v2.0.a1
pyrus_communis pycom03g02570 pycom03g02580
rosa_chinensis RchiOBHm_Chr4g0419101 RchiOBHm_Chr5g0075711 RchiOBHm_Chr5g0075731 RchiOBHm_Chr5g0075781 RchiOBHm_Chr5g0075801 RchiOBHm_Chr5g0075811 RchiOBHm_Chr5g0075831 RchiOBHm_Chr5g0075841 RchiOBHm_Chr5g0075851 RchiOBHm_Chr5g0075861
rosa_laevigata RLG00000029834 RLG00000036588 RLG00000036591 RLG00000036592 RLG00000036594 RLG00000036595 RLG00000036597 RLG00000036647
rosa_multiflora Rmu_co8127406.1_g000001 Rmu_co8138284.1_g000001 Rmu_sc0002101.1_g000001 Rmu_sc0002101.1_g000006 Rmu_sc0002652.1_g000027 Rmu_sc0002652.1_g000029 Rmu_sc0008562.1_g000002 Rmu_sc0019599.1_g000001 Rmu_sc0019861.1_g000005 Rmu_sc0029317.1_g000001 Rmu_sc0031378.1_g000001 Rmu_ssc0000402.1_g000001
rosa_roxburghii Rroxscaffold_1G00005820 Rroxscaffold_1G00005830 Rroxscaffold_1G00005840 Rroxscaffold_1G00005850 Rroxscaffold_1G00005860 Rroxscaffold_1G00005870 Rroxscaffold_1G00005890 Rroxscaffold_5G00340930 Rroxscaffold_5G00343250 Rroxscaffold_5G00369260
rosa_rugosa Rorug05G0442200 Rorug05G0442300.1 Rorug05G0442400 Rorug05G0442500 Rorug05G0442600 Rorug05G0442700 Rorug05G0442900
rosa_samantha Rh1AG189900 Rh2DG257500 Rh5AG498900 Rh5AG499100 Rh5AG499400 Rh5AG499500 Rh5AG499600 Rh5AG499700 Rh5AG499900 Rh5AG506800 Rh5BG519900 Rh5BG520100 Rh5BG520400 Rh5BG520500 Rh5BG520600 Rh5BG520800 Rh5BG520900 Rh5BG521100 Rh5CG543900 Rh5CG544100 Rh5CG544400 Rh5CG544500 Rh5CG544600 Rh5CG544800 Rh5CG544900 Rh5CG545000 Rh5CG545200 Rh5DG532700 Rh5DG533100 Rh5DG533200 Rh5DG533400 Rh5DG533500 Rh5DG533600 Rh5DG533700
rosa_wichuraiana Rw5G046310 Rw5G046340 Rw5G046350 Rw5G046360 Rw5G046370 Rw5G046380 Rw5G046400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 988
AccB7I CCANNNNNTGG 1 cut(s) 1373
AccI GTMKAC 1 cut(s) 140
AccII CGCG 1 cut(s) 1298
AciI CCGC 3 cut(s) 112, 536, 1472
AcsI RAATTY 1 cut(s) 264
AcuI CTGAAG 5 cut(s) 785, 833, 1097, 1127, 1418
AdeI CACNNNGTG 1 cut(s) 1325
AfaI GTAC 3 cut(s) 426, 534, 1062
AfiI CCNNNNNNNGG 6 cut(s) 56, 167, 411, 650, 695, 1373
AgsI TTSAA 6 cut(s) 148, 467, 575, 921, 1019, 1484
AhdI GACNNNNNGTC 1 cut(s) 374
AjnI CCWGG 1 cut(s) 649
AleI CACNNNNGTG 1 cut(s) 287
AluBI AGCT 9 cut(s) 926, 967, 1049, 1165, 1189, 1237, 1273, 1456, 1537
AluI AGCT 9 cut(s) 926, 967, 1049, 1165, 1189, 1237, 1273, 1456, 1537
Alw21I GWGCWC 1 cut(s) 1591
Alw26I GTCTC 1 cut(s) 382
AlwNI CAGNNNCTG 5 cut(s) 359, 700, 1237, 1396, 1537
Ama87I CYCGRG 1 cut(s) 191
AoxI GGCC 3 cut(s) 62, 631, 1606
ApeKI GCWGC 9 cut(s) 230, 233, 994, 1189, 1207, 1234, 1339, 1531, 1534
ApoI RAATTY 1 cut(s) 264
AspA2I CCTAGG 1 cut(s) 794
AspLEI GCGC 1 cut(s) 154
AspS9I GGNCC 3 cut(s) 63, 341, 1000
AsuC2I CCSGG 1 cut(s) 666
AsuHPI GGTGA 2 cut(s) 1268, 1564
AvaI CYCGRG 1 cut(s) 191
AvaII GGWCC 2 cut(s) 341, 1000
AvrII CCTAGG 1 cut(s) 794
BanII GRGCYC 1 cut(s) 1013
BbsI GAAGAC 2 cut(s) 909, 947
Bbv12I GWGCWC 1 cut(s) 1591
BbvI GCAGC 9 cut(s) 217, 220, 1006, 1176, 1219, 1246, 1326, 1543, 1546
BccI CCATC 3 cut(s) 50, 955, 1576
BceAI ACGGC 1 cut(s) 77
BcgI CGANNNNNNTGC 4 cut(s) 182, 216, 338, 372
BciT130I CCWGG 1 cut(s) 651
BclI TGATCA 1 cut(s) 361
BcnI CCSGG 1 cut(s) 666
BcoDI GTCTC 1 cut(s) 382
BfaI CTAG 5 cut(s) 240, 323, 795, 1242, 1514
BfmI CTRYAG 4 cut(s) 779, 1190, 1340, 1457
BfuAI ACCTGC 1 cut(s) 988
BlnI CCTAGG 1 cut(s) 794
BlpI GCTNAGC 1 cut(s) 927
Bme1390I CCNGG 2 cut(s) 651, 666
Bme18I GGWCC 2 cut(s) 341, 1000
BmeRI GACNNNNNGTC 1 cut(s) 374
BmeT110I CYCGRG 1 cut(s) 191
BmgT120I GGNCC 3 cut(s) 63, 341, 1000
BmiI GGNNCC 2 cut(s) 342, 1002
BmrFI CCNGG 2 cut(s) 651, 666
BoxI GACNNNNGTC 1 cut(s) 1028
BpiI GAAGAC 2 cut(s) 909, 947
BpmI CTGGAG 2 cut(s) 588, 735
Bpu1102I GCTNAGC 1 cut(s) 927
BpuEI CTTGAG 1 cut(s) 36
BpuMI CCSGG 1 cut(s) 666
BsaJI CCNNGG 3 cut(s) 102, 649, 794
BsaWI WCCGGW 2 cut(s) 611, 1027
Bsc4I CCNNNNNNNGG 6 cut(s) 56, 167, 411, 650, 695, 1373
Bse1I ACTGG 1 cut(s) 244
Bse3DI GCAATG 2 cut(s) 386, 1079
BseBI CCWGG 1 cut(s) 651
BseDI CCNNGG 3 cut(s) 102, 649, 794
BseGI GGATG 1 cut(s) 311
BseLI CCNNNNNNNGG 6 cut(s) 56, 167, 411, 650, 695, 1373
BseMI GCAATG 2 cut(s) 386, 1079
BseMII CTCAG 2 cut(s) 284, 941
BseNI ACTGG 1 cut(s) 244
BseRI GAGGAG 4 cut(s) 39, 103, 678, 1350
BseXI GCAGC 9 cut(s) 217, 220, 1006, 1176, 1219, 1246, 1326, 1543, 1546
BseYI CCCAGC 3 cut(s) 476, 1041, 1437
BsgI GTGCAG 2 cut(s) 582, 696
Bsh1236I CGCG 1 cut(s) 1298
BshFI GGCC 3 cut(s) 64, 633, 1608
BsiHKAI GWGCWC 1 cut(s) 1591
BsiHKCI CYCGRG 1 cut(s) 191
BsiSI CCGG 4 cut(s) 459, 612, 666, 1028
BslFI GGGAC 3 cut(s) 354, 388, 986
BslI CCNNNNNNNGG 6 cut(s) 56, 167, 411, 650, 695, 1373
BsmAI GTCTC 1 cut(s) 382
BsmFI GGGAC 3 cut(s) 354, 388, 986
BsmI GAATGC 4 cut(s) 42, 102, 555, 1312
BsnI GGCC 3 cut(s) 64, 633, 1608
BsoBI CYCGRG 1 cut(s) 191
Bsp1286I GDGCHC 2 cut(s) 1013, 1591
Bsp1407I TGTACA 1 cut(s) 1060
Bsp143I GATC 1 cut(s) 361
Bsp1720I GCTNAGC 1 cut(s) 927
BspACI CCGC 3 cut(s) 112, 536, 1472
BspANI GGCC 3 cut(s) 64, 633, 1608
BspCNI CTCAG 2 cut(s) 283, 940
BspFNI CGCG 1 cut(s) 1298
BspLI GGNNCC 2 cut(s) 342, 1002
BspMAI CTGCAG 3 cut(s) 783, 1194, 1344
BspMI ACCTGC 1 cut(s) 988
BsrDI GCAATG 2 cut(s) 386, 1079
BsrGI TGTACA 1 cut(s) 1060
BsrI ACTGG 1 cut(s) 244
BssECI CCNNGG 3 cut(s) 102, 649, 794
BssMI GATC 1 cut(s) 361
BssT1I CCWWGG 1 cut(s) 794
Bst2UI CCWGG 1 cut(s) 651
Bst4CI ACNGT 3 cut(s) 286, 906, 1248
Bst6I CTCTTC 1 cut(s) 838
BstAPI GCANNNNNTGC 3 cut(s) 719, 880, 1198
BstAUI TGTACA 1 cut(s) 1060
BstC8I GCNNGC 5 cut(s) 393, 456, 1047, 1239, 1344
BstDEI CTNAG 2 cut(s) 270, 927
BstDSI CCRYGG 1 cut(s) 102
BstF5I GGATG 1 cut(s) 311
BstFNI CGCG 1 cut(s) 1298
BstHHI GCGC 1 cut(s) 154
BstKTI GATC 1 cut(s) 364
BstMAI GTCTC 1 cut(s) 382
BstMBI GATC 1 cut(s) 361
BstNI CCWGG 1 cut(s) 651
BstPAI GACNNNNGTC 1 cut(s) 1028
BstSCI CCNGG 2 cut(s) 649, 664
BstSFI CTRYAG 4 cut(s) 779, 1190, 1340, 1457
BstUI CGCG 1 cut(s) 1298
BstV1I GCAGC 9 cut(s) 217, 220, 1006, 1176, 1219, 1246, 1326, 1543, 1546
BstV2I GAAGAC 2 cut(s) 909, 947
BstXI CCANNNNNNTGG 1 cut(s) 1582
BsuRI GGCC 3 cut(s) 64, 633, 1608
BtgI CCRYGG 1 cut(s) 102
BtgZI GCGATG 2 cut(s) 140, 933
BtsCI GGATG 1 cut(s) 311
BtsI GCAGTG 3 cut(s) 680, 776, 867
BtsIMutI CAGTG 4 cut(s) 680, 776, 867, 1039
BveI ACCTGC 1 cut(s) 988
Cac8I GCNNGC 5 cut(s) 393, 456, 1047, 1239, 1344
CaiI CAGNNNCTG 5 cut(s) 359, 700, 1237, 1396, 1537
CfoI GCGC 1 cut(s) 154
Cfr13I GGNCC 3 cut(s) 63, 341, 1000
CseI GACGC 2 cut(s) 1169, 1304
Csp6I GTAC 3 cut(s) 425, 533, 1061
CviAII CATG 3 cut(s) 844, 1054, 1303
CviQI GTAC 3 cut(s) 425, 533, 1061
DdeI CTNAG 2 cut(s) 270, 927
DpnI GATC 1 cut(s) 363
DpnII GATC 1 cut(s) 361
DraIII CACNNNGTG 1 cut(s) 1325
DriI GACNNNNNGTC 1 cut(s) 374
Eam1104I CTCTTC 1 cut(s) 838
Eam1105I GACNNNNNGTC 1 cut(s) 374
EarI CTCTTC 1 cut(s) 838
Eco130I CCWWGG 1 cut(s) 794
Eco24I GRGCYC 1 cut(s) 1013
Eco47I GGWCC 2 cut(s) 341, 1000
Eco57I CTGAAG 5 cut(s) 785, 833, 1097, 1127, 1418
Eco88I CYCGRG 1 cut(s) 191
EcoO109I RGGNCCY 2 cut(s) 341, 1000
EcoRII CCWGG 1 cut(s) 649
EcoT14I CCWWGG 1 cut(s) 794
EcoT38I GRGCYC 1 cut(s) 1013
ErhI CCWWGG 1 cut(s) 794
FaeI CATG 3 cut(s) 847, 1057, 1306
FaqI GGGAC 3 cut(s) 354, 388, 986
FatI CATG 3 cut(s) 843, 1053, 1302
FauNDI CATATG 1 cut(s) 676
FbaI TGATCA 1 cut(s) 361
FblI GTMKAC 1 cut(s) 140
FokI GGATG 1 cut(s) 298
FriOI GRGCYC 1 cut(s) 1013
FspBI CTAG 5 cut(s) 240, 323, 795, 1242, 1514
GlaI GCGC 1 cut(s) 153
GsaI CCCAGC 3 cut(s) 480, 1045, 1441
GsuI CTGGAG 2 cut(s) 588, 735
HaeIII GGCC 3 cut(s) 64, 633, 1608
HapII CCGG 4 cut(s) 459, 612, 666, 1028
HgaI GACGC 2 cut(s) 1169, 1304
HhaI GCGC 1 cut(s) 154
Hin1II CATG 3 cut(s) 847, 1057, 1306
Hin6I GCGC 1 cut(s) 152
HinP1I GCGC 1 cut(s) 152
HincII GTYRAC 4 cut(s) 909, 972, 1184, 1294
HindII GTYRAC 4 cut(s) 909, 972, 1184, 1294
HinfI GANTC 6 cut(s) 326, 350, 808, 943, 1024, 1135
HpaI GTTAAC 1 cut(s) 909
HpaII CCGG 4 cut(s) 459, 612, 666, 1028
HphI GGTGA 2 cut(s) 1268, 1564
Hpy166II GTNNAC 5 cut(s) 141, 909, 972, 1184, 1294
Hpy188I TCNGA 8 cut(s) 549, 561, 702, 1116, 1134, 1286, 1398, 1581
Hpy188III TCNNGA 9 cut(s) 53, 173, 259, 272, 323, 347, 489, 1484, 1600
Hpy8I GTNNAC 5 cut(s) 141, 909, 972, 1184, 1294
HpyAV CCTTC 2 cut(s) 142, 780
HpyCH4III ACNGT 3 cut(s) 286, 906, 1248
HpyF3I CTNAG 2 cut(s) 270, 927
Hsp92II CATG 3 cut(s) 847, 1057, 1306
HspAI GCGC 1 cut(s) 152
Ksp22I TGATCA 1 cut(s) 361
KspAI GTTAAC 1 cut(s) 909
Kzo9I GATC 1 cut(s) 361
LmnI GCTCC 3 cut(s) 90, 754, 1411
Lsp1109I GCAGC 9 cut(s) 217, 220, 1006, 1176, 1219, 1246, 1326, 1543, 1546
MaeI CTAG 5 cut(s) 240, 323, 795, 1242, 1514
MaeIII GTNAC 1 cut(s) 289
MalI GATC 1 cut(s) 363
MboI GATC 1 cut(s) 361
MboII GAAGA 6 cut(s) 735, 825, 909, 952, 1103, 1588
MhlI GDGCHC 2 cut(s) 1013, 1591
MluCI AATT 2 cut(s) 264, 527
MlyI GAGTC 2 cut(s) 937, 1018
MmeI TCCRAC 2 cut(s) 228, 661
MseI TTAA 4 cut(s) 23, 908, 1074, 1425
MslI CAYNNNNRTG 5 cut(s) 107, 287, 627, 1089, 1580
MspA1I CMGCKG 3 cut(s) 1189, 1237, 1537
MspI CCGG 4 cut(s) 459, 612, 666, 1028
MspR9I CCNGG 2 cut(s) 651, 666
Mva1269I GAATGC 4 cut(s) 42, 102, 555, 1312
MvaI CCWGG 1 cut(s) 651
MvnI CGCG 1 cut(s) 1298
NciI CCSGG 1 cut(s) 666
NdeI CATATG 1 cut(s) 676
NdeII GATC 1 cut(s) 361
NlaIII CATG 3 cut(s) 847, 1057, 1306
NlaIV GGNNCC 2 cut(s) 342, 1002
NmuCI GTSAC 1 cut(s) 289
OliI CACNNNNGTG 1 cut(s) 287
PaeR7I CTCGAG 1 cut(s) 191
PctI GAATGC 4 cut(s) 42, 102, 555, 1312
PfeI GAWTC 4 cut(s) 326, 350, 808, 1135
PflMI CCANNNNNTGG 1 cut(s) 1373
PleI GAGTC 2 cut(s) 937, 1018
PpsI GAGTC 2 cut(s) 937, 1018
PpuMI RGGWCCY 2 cut(s) 341, 1000
PshAI GACNNNNGTC 1 cut(s) 1028
Psp5II RGGWCCY 2 cut(s) 341, 1000
Psp6I CCWGG 1 cut(s) 649
PspFI CCCAGC 3 cut(s) 476, 1041, 1437
PspGI CCWGG 1 cut(s) 649
PspN4I GGNNCC 2 cut(s) 342, 1002
PspPI GGNCC 3 cut(s) 63, 341, 1000
PspPPI RGGWCCY 2 cut(s) 341, 1000
PspXI VCTCGAGB 1 cut(s) 191
PsrI GAACNNNNNNTAC 2 cut(s) 516, 548
PstI CTGCAG 3 cut(s) 783, 1194, 1344
PstNI CAGNNNCTG 5 cut(s) 359, 700, 1237, 1396, 1537
PvuII CAGCTG 3 cut(s) 1189, 1237, 1537
RsaI GTAC 3 cut(s) 426, 534, 1062
RsaNI GTAC 3 cut(s) 425, 533, 1061
RseI CAYNNNNRTG 5 cut(s) 107, 287, 627, 1089, 1580
SaqAI TTAA 4 cut(s) 23, 908, 1074, 1425
Sau3AI GATC 1 cut(s) 361
Sau96I GGNCC 3 cut(s) 63, 341, 1000
SchI GAGTC 2 cut(s) 937, 1018
ScrFI CCNGG 2 cut(s) 651, 666
SduI GDGCHC 2 cut(s) 1013, 1591
SfcI CTRYAG 4 cut(s) 779, 1190, 1340, 1457
Sfr274I CTCGAG 1 cut(s) 191
SinI GGWCC 2 cut(s) 341, 1000
SlaI CTCGAG 1 cut(s) 191
SmiMI CAYNNNNRTG 5 cut(s) 107, 287, 627, 1089, 1580
SmlI CTYRAG 2 cut(s) 51, 191
SmoI CTYRAG 2 cut(s) 51, 191
Sse9I AATT 2 cut(s) 264, 527
SsiI CCGC 3 cut(s) 112, 536, 1472
SspI AATATT 2 cut(s) 544, 661
SspMI CTAG 5 cut(s) 240, 323, 795, 1242, 1514
StyD4I CCNGG 2 cut(s) 649, 664
StyI CCWWGG 1 cut(s) 794
TaaI ACNGT 3 cut(s) 286, 906, 1248
TaqI TCGA 3 cut(s) 192, 348, 956
TasI AATT 2 cut(s) 264, 527
TatI WGTACW 1 cut(s) 1060
TauI GCSGC 2 cut(s) 115, 1474
TfiI GAWTC 4 cut(s) 326, 350, 808, 1135
Tru1I TTAA 4 cut(s) 23, 908, 1074, 1425
Tru9I TTAA 4 cut(s) 23, 908, 1074, 1425
TscAI CASTG 4 cut(s) 687, 783, 867, 1039
TseFI GTSAC 1 cut(s) 289
TseI GCWGC 9 cut(s) 230, 233, 994, 1189, 1207, 1234, 1339, 1531, 1534
Tsp45I GTSAC 1 cut(s) 289
TspDTI ATGAA 4 cut(s) 201, 1070, 1319, 1543
TspGWI ACGGA 2 cut(s) 119, 720
TspRI CASTG 4 cut(s) 687, 783, 867, 1039
Van91I CCANNNNNTGG 1 cut(s) 1373
VpaK11BI GGWCC 2 cut(s) 341, 1000
XapI RAATTY 1 cut(s) 264
XbaI TCTAGA 1 cut(s) 322
XcmI CCANNNNNNNNNTGG 1 cut(s) 244
XhoI CTCGAG 1 cut(s) 191
XmaJI CCTAGG 1 cut(s) 794
XmiI GTMKAC 1 cut(s) 140
XspI CTAG 5 cut(s) 240, 323, 795, 1242, 1514
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.