Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0000146

Physical Location & Seq

Genomic Coordinates Reverse (-)

20819884 .. 20823095

Gene Structure 3212 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g16890.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGAAAATTGGGCAGCTGAAAGACATTGAAAATGGGGGAATTAATAGGCATGAGGAGTTGGACCGGCCTTTCATTCAGCCAAAGAGAGTTGTTGCTCATGAAGATGAAGACAGAGGGAATACTATGAAACATGGATCAATTGGTATGATTTTGCTTAGTACAGGCGTTGCAGTGGGCTATTCAGCTCCCAGTCAATCTGCTATCAGGAAAGATCTTCGTCTCTCTATCACTGAGTATTCCATGTTTGGCTCTATCCTATCAATTGGTGCAGTGTTGGGTGCGTTTACAAGTGGTAAGATTGCAGAGACTCTGGGCCGGAAAGGGGGAGCTATATTACTTGATATAGGAAGGTTTTTAACTGGTTATGGAATTTCATTGTTCTCTTATGTGGTCCCAGTATTTATAGCCGAAATAGCGCCCAAAAATCTCCGTGGAGGGCTTGCAACATTGAATCAGCTCTTCATAATAGGAACAATCATATCCTGGAGAACATTATCTCTAATTGGTAATGCAATTTTGCCTTGCATTATCCTGGTTTTGGGTCAATGGTTTATCCCAGAGTCACCTAGATGGTTGGCAAAAGTCGGTCAAGAGGAAGAATTTGAAATTGCACTACAAAGGCTCCATGGGAAAAATGCTGATGTATCTGATGAAAAGGCGGAAATTCACGAAGCTTTCGATTTCGTCGAATTCTGTCGTACTTGTTCTGTTCCTCTACATCAAATCCTCTTTGCAATGGATCTTGCAATCTTTGGTGATCAACCTGAAGTTTCCCGTGAACAATTGATGGCTCTTCAAAACGAGAGCTCAGGCTTTAGAGTGCAACTGGATGGCACAAACTATCCAGTATGGCGACAACTTATGAAGATGCATCTTGGCGGTGTGGGCAAGTGGGAATATGTCGCTGGTACTCTCCAACGACCTGAAGAAGTTGGCAAGGCACAAGCTATGTGGGATGCTGCAAATTCTAATACGATGGTGCTTCTTCTCAAATCCATGACCAGACCAATCATGTTGTTGTTTTCAAGCTATACGACGCCAAAGGCAATCTGGGATGCAGTCGCAACCACATACTATGATGGGAGTGATTTTGGAAGAGTTCATGAGTTGACCTGTCAAGCTTTCGCAACCACTCAAGCTGGTAAGCCTCTTACAGAATATTATGTCGGTTTGAAGGCTATCATGCAAGAGTTGGATGAAAGGGACCCCAATCCTATGGTATGTGATCTGGATATTGCTACACACAACAAGTCCCAAGACAAGATGAGAGTCCACATCTTCTTGAATGGATTGGATTCAAAATTTGCTACTGCTAAGGGAGAATTGCTTCGACAAGCCACACCAACAAGTCTGGAACAAGCTTATGCTTATGTACGCAAAGATGAATCTAATCAATCTAGCGCAAAGGAGTTGCATACCAAGGTATCCAGCCTCACCGTCCAATCTAAACCTCAACAAGATTGGAAACCAAAGAACCAAGACAATGAACTTCGAATCCAGCCTGCTCATGGACCAGATCTTGCTAAGGTGCAGTGCTTCTATTGTAAGGAGTTTGGACACTACAAGAACTCTTGTCCTAAGAAAACAAATCAAGGAGCTACCTATGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005402 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0022804 GO:0022857 GO:0022890 GO:0034219 GO:0034220 GO:0046323 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0098655 GO:0098660 GO:0098662 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

537

Amino Acids

59.69

Weight (kDa)

6.52

Isoelectric Point (pI)

39.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	113 - 229	2e-20	Sugar (and other) transporter
Retrotran_gag_3	PF14244	274 - 309	5.5e-06	gag-polypeptide of LTR copia-type
Retrotran_gag_2	PF14223	288 - 401	3.1e-07	gag-polypeptide of LTR copia-type

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000146)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g19561 FvH4_1g25371 FvH4_1g25961 FvH4_2g00352 FvH4_2g00861 FvH4_2g04952 FvH4_2g05413 FvH4_2g07531 FvH4_2g08961 FvH4_2g25141 FvH4_2g27292 FvH4_3g18164 FvH4_3g19921 FvH4_3g43870 FvH4_4g14441 FvH4_4g15581 FvH4_4g15582 FvH4_4g16890 FvH4_4g19782 FvH4_4g33444 FvH4_4g33921 FvH4_5g22281 FvH4_5g22282 FvH4_5g32571 FvH4_5g37451 FvH4_5g39631 FvH4_6g04721 FvH4_6g11661 FvH4_6g20571 FvH4_6g32791 FvH4_7g23184
prunus_persica	Prupe.1G090900_v2.0.a1 Prupe.1G241200_v2.0.a1 Prupe.1G534100_v2.0.a1 Prupe.3G076700_v2.0.a1 Prupe.4G150800_v2.0.a1 Prupe.4G181800_v2.0.a1 Prupe.4G240900_v2.0.a1 Prupe.4G247600_v2.0.a1 Prupe.6G115900_v2.0.a1 Prupe.6G327500_v2.0.a1 Prupe.8G071700_v2.0.a1
pyrus_communis	pycom06g11480 pycom10g08330 pycom15g04320 pycom15g04350 pycom15g12620 pycom2874g00060
rosa_chinensis	RchiOBHm_Chr1g0317241 RchiOBHm_Chr1g0341801 RchiOBHm_Chr1g0341931 RchiOBHm_Chr1g0359621 RchiOBHm_Chr2g0113741 RchiOBHm_Chr2g0117261 RchiOBHm_Chr2g0138831 RchiOBHm_Chr2g0141421 RchiOBHm_Chr2g0145281 RchiOBHm_Chr2g0152991 RchiOBHm_Chr3g0448001 RchiOBHm_Chr3g0450981 RchiOBHm_Chr3g0455161 RchiOBHm_Chr3g0457401 RchiOBHm_Chr3g0460001 RchiOBHm_Chr4g0387431 RchiOBHm_Chr4g0388741 RchiOBHm_Chr4g0444201 RchiOBHm_Chr4g0444261 RchiOBHm_Chr5g0010221 RchiOBHm_Chr6g0271721 RchiOBHm_Chr6g0274641 RchiOBHm_Chr6g0294691 RchiOBHm_Chr7g0237031 RchiOBHm_Chr7g0238461 RchiOBHm_Chr7g0239981
rosa_laevigata	RLG00000009017
rosa_multiflora	Rmu_co7986768.1_g000001 Rmu_co8302239.1_g000001 Rmu_co8485799.1_g000001 Rmu_sc0000061.1_g000013 Rmu_sc0000303.1_g000034 Rmu_sc0000303.1_g000035 Rmu_sc0000315.1_g000017 Rmu_sc0000349.1_g000003 Rmu_sc0000498.1_g000068 Rmu_sc0000508.1_g000014 Rmu_sc0000602.1_g000001 Rmu_sc0000633.1_g000002 Rmu_sc0000638.1_g000030 Rmu_sc0000756.1_g000016 Rmu_sc0000756.1_g000017 Rmu_sc0000785.1_g000037 Rmu_sc0000795.1_g000017 Rmu_sc0000796.1_g000030 Rmu_sc0000863.1_g000023 Rmu_sc0000920.1_g000021 Rmu_sc0000960.1_g000015 Rmu_sc0000982.1_g000102 Rmu_sc0001036.1_g000008 Rmu_sc0001036.1_g000009 Rmu_sc0001643.1_g000029 Rmu_sc0001687.1_g000026 Rmu_sc0001708.1_g000037 Rmu_sc0001768.1_g000015 Rmu_sc0001790.1_g000022 Rmu_sc0002180.1_g000007 Rmu_sc0002211.1_g000006 Rmu_sc0002270.1_g000010 Rmu_sc0002404.1_g000031 Rmu_sc0002858.1_g000016 Rmu_sc0003063.1_g000028 Rmu_sc0003730.1_g000017 Rmu_sc0004087.1_g000020 Rmu_sc0004618.1_g000048 Rmu_sc0004724.1_g000005 Rmu_sc0005167.1_g000036 Rmu_sc0005781.1_g000003 Rmu_sc0005878.1_g000012 Rmu_sc0006011.1_g000003 Rmu_sc0006343.1_g000011 Rmu_sc0006573.1_g000007 Rmu_sc0006599.1_g000007 Rmu_sc0006803.1_g000014 Rmu_sc0006836.1_g000002 Rmu_sc0006849.1_g000002 Rmu_sc0007109.1_g000009 Rmu_sc0009268.1_g000016 Rmu_sc0009618.1_g000017 Rmu_sc0009674.1_g000009 Rmu_sc0010244.1_g000009 Rmu_sc0011151.1_g000004 Rmu_sc0011356.1_g000001 Rmu_sc0011674.1_g000002 Rmu_sc0011778.1_g000016 Rmu_sc0012342.1_g000001 Rmu_sc0012467.1_g000002 Rmu_sc0012574.1_g000003 Rmu_sc0012913.1_g000005 Rmu_sc0013612.1_g000020 Rmu_sc0014824.1_g000001 Rmu_sc0017869.1_g000002 Rmu_sc0018085.1_g000003 Rmu_sc0024789.1_g000001 Rmu_sc0025106.1_g000013 Rmu_sc0034502.1_g000001 Rmu_sc0034547.1_g000001 Rmu_sc0035094.1_g000001 Rmu_sc0035095.1_g000001 Rmu_ssc0000100.1_g000027 Rmu_ssc0000244.1_g000005 Rmu_ssc0000371.1_g000029 Rmu_ssc0000381.1_g000004
rosa_roxburghii	Rroxscaffold_1G00015480 Rroxscaffold_1G00023580 Rroxscaffold_1G00039340 Rroxscaffold_1G00047080 Rroxscaffold_2G00095820 Rroxscaffold_2G00125200 Rroxscaffold_2G00128330 Rroxscaffold_3G00270860
rosa_rugosa	Rorug06G0120700
rosa_samantha	Rh3BG173100 Rh6AG089600 Rh7AG488100 Rh7DG389600
rosa_wichuraiana	Rw0G001150 Rw0G001990 Rw0G002010 Rw0G019540 Rw1G013730 Rw1G024110 Rw1G029190 Rw2G018850 Rw2G021090 Rw2G022260 Rw2G023180 Rw2G027280 Rw3G010190 Rw3G020660 Rw3G029380 Rw4G002390 Rw4G002690 Rw4G033260 Rw5G011960 Rw5G023110 Rw5G025250 Rw5G028950 Rw5G033740 Rw5G033950 Rw5G037900 Rw6G009640 Rw6G011620 Rw6G027720 Rw7G010680 Rw7G042070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	659, 879
AclWI	GGATC	2 cut(s)	142, 747
AcsI	RAATTY	6 cut(s)	369, 599, 663, 689, 964, 1301
AcuI	CTGAAG	2 cut(s)	786, 945
AcyI	GRCGYC	1 cut(s)	1037
AfaI	GTAC	4 cut(s)	160, 700, 910, 1374
AfiI	CCNNNNNNNGG	3 cut(s)	322, 538, 1508
AgsI	TTSAA	8 cut(s)	29, 451, 605, 797, 1026, 1174, 1285, 1299
AjnI	CCWGG	2 cut(s)	482, 531
AloI	GAACNNNNNNTCC	2 cut(s)	1479, 1511
Alw21I	GWGCWC	1 cut(s)	809
Alw26I	GTCTC	2 cut(s)	224, 299
AlwI	GGATC	2 cut(s)	142, 747
AoxI	GGCC	2 cut(s)	65, 313
ApeKI	GCWGC	2 cut(s)	13, 959
ApoI	RAATTY	6 cut(s)	369, 599, 663, 689, 964, 1301
AseI	ATTAAT	1 cut(s)	42
Asp700I	GAANNNNTTC	1 cut(s)	1326
AspLEI	GCGC	2 cut(s)	418, 1403
AspS9I	GGNCC	5 cut(s)	61, 313, 391, 1204, 1511
AsuHPI	GGTGA	3 cut(s)	555, 767, 1426
AsuII	TTCGAA	1 cut(s)	1492
AvaII	GGWCC	4 cut(s)	61, 391, 1204, 1511
BaeI	ACNNNNGTAYC	2 cut(s)	1407, 1440
BanII	GRGCYC	1 cut(s)	809
BbsI	GAAGAC	1 cut(s)	114
Bbv12I	GWGCWC	1 cut(s)	809
BbvI	GCAGC	2 cut(s)	25, 946
BccI	CCATC	5 cut(s)	564, 781, 824, 970, 1073
BciT130I	CCWGG	2 cut(s)	484, 533
BciVI	GTATCC	1 cut(s)	1435
BclI	TGATCA	1 cut(s)	757
BcoDI	GTCTC	2 cut(s)	224, 299
BfaI	CTAG	2 cut(s)	567, 1398
BfoI	RGCGCY	1 cut(s)	419
BfuI	GTATCC	1 cut(s)	1435
BglII	AGATCT	2 cut(s)	211, 1516
BisI	GCNGC	2 cut(s)	14, 960
BlsI	GCNGC	2 cut(s)	15, 961
Bme1390I	CCNGG	2 cut(s)	484, 533
Bme18I	GGWCC	4 cut(s)	61, 391, 1204, 1511
BmgT120I	GGNCC	5 cut(s)	61, 313, 391, 1204, 1511
BmiI	GGNNCC	4 cut(s)	393, 623, 1205, 1206
BmrFI	CCNGG	2 cut(s)	484, 533
BmrI	ACTGGG	2 cut(s)	183, 389
BmsI	GCATC	4 cut(s)	858, 880, 946, 1045
BmuI	ACTGGG	2 cut(s)	183, 389
BpiI	GAAGAC	1 cut(s)	114
BpmI	CTGGAG	1 cut(s)	505
Bpu10I	CCTNAGC	3 cut(s)	808, 1314, 1524
Bpu14I	TTCGAA	1 cut(s)	1492
BpuEI	CTTGAG	1 cut(s)	1119
BsaHI	GRCGYC	1 cut(s)	1037
BsaJI	CCNNGG	3 cut(s)	430, 625, 1419
BsaXI	ACNNNNNCTCC	2 cut(s)	606, 636
Bsc4I	CCNNNNNNNGG	3 cut(s)	322, 538, 1508
Bse118I	RCCGGY	1 cut(s)	63
Bse1I	ACTGG	5 cut(s)	189, 364, 395, 831, 845
Bse3DI	GCAATG	1 cut(s)	741
BseBI	CCWGG	2 cut(s)	484, 533
BseDI	CCNNGG	3 cut(s)	430, 625, 1419
BseGI	GGATG	4 cut(s)	835, 961, 1060, 1201
BseLI	CCNNNNNNNGG	3 cut(s)	322, 538, 1508
BseMI	GCAATG	1 cut(s)	741
BseMII	CTCAG	2 cut(s)	222, 822
BseNI	ACTGG	5 cut(s)	189, 364, 395, 831, 845
BseRI	GAGGAG	1 cut(s)	68
BseXI	GCAGC	2 cut(s)	25, 946
BsgI	GTGCAG	2 cut(s)	288, 1550
BshFI	GGCC	2 cut(s)	67, 315
BsiHKAI	GWGCWC	1 cut(s)	809
BsiSI	CCGG	2 cut(s)	64, 316
BslFI	GGGAC	3 cut(s)	377, 1217, 1237
BslI	CCNNNNNNNGG	3 cut(s)	322, 538, 1508
BsmAI	GTCTC	2 cut(s)	224, 299
BsmBI	CGTCTC	1 cut(s)	224
BsmFI	GGGAC	3 cut(s)	377, 1217, 1237
BsnI	GGCC	2 cut(s)	67, 315
Bsp119I	TTCGAA	1 cut(s)	1492
Bsp1286I	GDGCHC	1 cut(s)	809
Bsp143I	GATC	6 cut(s)	134, 211, 739, 757, 1225, 1516
Bsp19I	CCATGG	1 cut(s)	625
BspACI	CCGC	2 cut(s)	659, 879
BspANI	GGCC	2 cut(s)	67, 315
BspCNI	CTCAG	2 cut(s)	223, 821
BspHI	TCATGA	2 cut(s)	97, 1102
BspLI	GGNNCC	4 cut(s)	393, 623, 1205, 1206
BspPI	GGATC	2 cut(s)	142, 747
BspQI	GCTCTTC	2 cut(s)	464, 798
BspT104I	TTCGAA	1 cut(s)	1492
BsrDI	GCAATG	1 cut(s)	741
BsrFI	RCCGGY	1 cut(s)	63
BsrI	ACTGG	5 cut(s)	189, 364, 395, 831, 845
BssAI	RCCGGY	1 cut(s)	63
BssECI	CCNNGG	3 cut(s)	430, 625, 1419
BssMI	GATC	6 cut(s)	134, 211, 739, 757, 1225, 1516
BssNI	GRCGYC	1 cut(s)	1037
BssT1I	CCWWGG	2 cut(s)	625, 1419
Bst2UI	CCWGG	2 cut(s)	484, 533
Bst4CI	ACNGT	1 cut(s)	1438
Bst6I	CTCTTC	3 cut(s)	464, 798, 1090
BstACI	GRCGYC	1 cut(s)	1037
BstBI	TTCGAA	1 cut(s)	1492
BstC8I	GCNNGC	2 cut(s)	441, 1503
BstDEI	CTNAG	6 cut(s)	155, 231, 808, 1314, 1524, 1578
BstDSI	CCRYGG	2 cut(s)	430, 625
BstF5I	GGATG	4 cut(s)	835, 961, 1060, 1201
BstH2I	RGCGCY	1 cut(s)	419
BstHHI	GCGC	2 cut(s)	418, 1403
BstKTI	GATC	6 cut(s)	137, 214, 742, 760, 1228, 1519
BstMAI	GTCTC	2 cut(s)	224, 299
BstMBI	GATC	6 cut(s)	134, 211, 739, 757, 1225, 1516
BstMWI	GCNNNNNNNGC	2 cut(s)	413, 885
BstNI	CCWGG	2 cut(s)	484, 533
BstSCI	CCNGG	2 cut(s)	482, 531
BstV1I	GCAGC	2 cut(s)	25, 946
BstV2I	GAAGAC	1 cut(s)	114
BstX2I	RGATCY	3 cut(s)	211, 739, 1516
BstXI	CCANNNNNNTGG	1 cut(s)	1216
BstYI	RGATCY	3 cut(s)	211, 739, 1516
BsuI	GTATCC	1 cut(s)	1435
BsuRI	GGCC	2 cut(s)	67, 315
BtgI	CCRYGG	2 cut(s)	430, 625
BtsCI	GGATG	4 cut(s)	835, 961, 1060, 1201
BtsI	GCAGTG	3 cut(s)	177, 276, 1538
BtsIMutI	CAGTG	4 cut(s)	177, 228, 276, 1538
Cac8I	GCNNGC	2 cut(s)	441, 1503
CciI	TCATGA	2 cut(s)	97, 1102
CfoI	GCGC	2 cut(s)	418, 1403
Cfr10I	RCCGGY	1 cut(s)	63
Cfr13I	GGNCC	5 cut(s)	61, 313, 391, 1204, 1511
CseI	GACGC	1 cut(s)	1045
Csp6I	GTAC	4 cut(s)	159, 699, 909, 1373
CspCI	CAANNNNNGTGG	2 cut(s)	932, 967
CviQI	GTAC	4 cut(s)	159, 699, 909, 1373
DdeI	CTNAG	6 cut(s)	155, 231, 808, 1314, 1524, 1578
DpnI	GATC	6 cut(s)	136, 213, 741, 759, 1227, 1518
DpnII	GATC	6 cut(s)	134, 211, 739, 757, 1225, 1516
Eam1104I	CTCTTC	3 cut(s)	464, 798, 1090
EarI	CTCTTC	3 cut(s)	464, 798, 1090
EciI	GGCGGA	1 cut(s)	674
Ecl136II	GAGCTC	1 cut(s)	807
Eco130I	CCWWGG	2 cut(s)	625, 1419
Eco24I	GRGCYC	1 cut(s)	809
Eco47I	GGWCC	4 cut(s)	61, 391, 1204, 1511
Eco53kI	GAGCTC	1 cut(s)	807
Eco57I	CTGAAG	2 cut(s)	786, 945
EcoICRI	GAGCTC	1 cut(s)	807
EcoO109I	RGGNCCY	1 cut(s)	1204
EcoRI	GAATTC	1 cut(s)	689
EcoRII	CCWGG	2 cut(s)	482, 531
EcoT14I	CCWWGG	2 cut(s)	625, 1419
EcoT22I	ATGCAT	1 cut(s)	873
EcoT38I	GRGCYC	1 cut(s)	809
ErhI	CCWWGG	2 cut(s)	625, 1419
Esp3I	CGTCTC	1 cut(s)	224
FaqI	GGGAC	3 cut(s)	377, 1217, 1237
FbaI	TGATCA	1 cut(s)	757
Fnu4HI	GCNGC	2 cut(s)	14, 960
FokI	GGATG	4 cut(s)	842, 968, 1067, 1208
FriOI	GRGCYC	1 cut(s)	809
Fsp4HI	GCNGC	2 cut(s)	14, 960
FspBI	CTAG	2 cut(s)	567, 1398
GlaI	GCGC	2 cut(s)	417, 1402
GluI	GCNGC	2 cut(s)	14, 960
GsuI	CTGGAG	1 cut(s)	505
HaeII	RGCGCY	1 cut(s)	419
HaeIII	GGCC	2 cut(s)	67, 315
HapII	CCGG	2 cut(s)	64, 316
HgaI	GACGC	1 cut(s)	1045
HhaI	GCGC	2 cut(s)	418, 1403
Hin1I	GRCGYC	1 cut(s)	1037
Hin6I	GCGC	2 cut(s)	416, 1401
HinP1I	GCGC	2 cut(s)	416, 1401
HincII	GTYRAC	1 cut(s)	1110
HindII	GTYRAC	1 cut(s)	1110
HindIII	AAGCTT	3 cut(s)	672, 1119, 1359
HinfI	GANTC	7 cut(s)	307, 451, 560, 1269, 1295, 1385, 1494
HpaII	CCGG	2 cut(s)	64, 316
HphI	GGTGA	3 cut(s)	555, 767, 1426
Hpy166II	GTNNAC	4 cut(s)	285, 779, 1110, 1273
Hpy188I	TCNGA	1 cut(s)	649
Hpy188III	TCNNGA	8 cut(s)	98, 205, 590, 668, 1103, 1229, 1282, 1352
Hpy8I	GTNNAC	4 cut(s)	285, 779, 1110, 1273
Hpy99I	CGWCG	2 cut(s)	689, 1039
HpyAV	CCTTC	2 cut(s)	342, 1168
HpyCH4III	ACNGT	1 cut(s)	1438
HpyF10VI	GCNNNNNNNGC	2 cut(s)	413, 885
HpyF3I	CTNAG	6 cut(s)	155, 231, 808, 1314, 1524, 1578
Hsp92I	GRCGYC	1 cut(s)	1037
HspAI	GCGC	2 cut(s)	416, 1401
KflI	GGGWCCC	1 cut(s)	1204
Ksp22I	TGATCA	1 cut(s)	757
Kzo9I	GATC	6 cut(s)	134, 211, 739, 757, 1225, 1516
LguI	GCTCTTC	2 cut(s)	464, 798
LmnI	GCTCC	4 cut(s)	190, 326, 627, 1595
Lsp1109I	GCAGC	2 cut(s)	25, 946
LweI	GCATC	4 cut(s)	858, 880, 946, 1045
MaeI	CTAG	2 cut(s)	567, 1398
MaeIII	GTNAC	1 cut(s)	561
MalI	GATC	6 cut(s)	136, 213, 741, 759, 1227, 1518
MboI	GATC	6 cut(s)	134, 211, 739, 757, 1225, 1516
MfeI	CAATTG	3 cut(s)	138, 261, 782
MflI	RGATCY	3 cut(s)	211, 739, 1516
MhlI	GDGCHC	1 cut(s)	809
MlyI	GAGTC	3 cut(s)	301, 569, 1278
MmeI	TCCRAC	3 cut(s)	39, 940, 1173
MnlI	CCTC	9 cut(s)	46, 107, 428, 586, 723, 737, 1158, 1442, 1461
Mph1103I	ATGCAT	1 cut(s)	873
MroXI	GAANNNNTTC	1 cut(s)	1326
MseI	TTAA	3 cut(s)	42, 356, 1609
MslI	CAYNNNNRTG	2 cut(s)	102, 568
MspA1I	CMGCKG	1 cut(s)	16
MspI	CCGG	2 cut(s)	64, 316
MspR9I	CCNGG	2 cut(s)	484, 533
MunI	CAATTG	3 cut(s)	138, 261, 782
MvaI	CCWGG	2 cut(s)	484, 533
MwoI	GCNNNNNNNGC	2 cut(s)	413, 885
NcoI	CCATGG	1 cut(s)	625
NdeII	GATC	6 cut(s)	134, 211, 739, 757, 1225, 1516
NlaIV	GGNNCC	4 cut(s)	393, 623, 1205, 1206
NmuCI	GTSAC	1 cut(s)	561
NsiI	ATGCAT	1 cut(s)	873
NspV	TTCGAA	1 cut(s)	1492
PagI	TCATGA	2 cut(s)	97, 1102
PciSI	GCTCTTC	2 cut(s)	464, 798
PcsI	WCGNNNNNNNCGW	2 cut(s)	675, 684
PdmI	GAANNNNTTC	1 cut(s)	1326
PfeI	GAWTC	4 cut(s)	451, 1295, 1385, 1494
PfoI	TCCNGGA	1 cut(s)	482
PkrI	GCNGC	2 cut(s)	15, 961
PleI	GAGTC	3 cut(s)	301, 568, 1277
PpsI	GAGTC	3 cut(s)	301, 568, 1277
PpuMI	RGGWCCY	1 cut(s)	1204
PshBI	ATTAAT	1 cut(s)	42
Psp124BI	GAGCTC	1 cut(s)	809
Psp5II	RGGWCCY	1 cut(s)	1204
Psp6I	CCWGG	2 cut(s)	482, 531
PspGI	CCWGG	2 cut(s)	482, 531
PspN4I	GGNNCC	4 cut(s)	393, 623, 1205, 1206
PspPI	GGNCC	5 cut(s)	61, 313, 391, 1204, 1511
PspPPI	RGGWCCY	1 cut(s)	1204
PsuI	RGATCY	3 cut(s)	211, 739, 1516
PvuII	CAGCTG	1 cut(s)	16
RsaI	GTAC	4 cut(s)	160, 700, 910, 1374
RsaNI	GTAC	4 cut(s)	159, 699, 909, 1373
RseI	CAYNNNNRTG	2 cut(s)	102, 568
SacI	GAGCTC	1 cut(s)	809
SapI	GCTCTTC	2 cut(s)	464, 798
SaqAI	TTAA	3 cut(s)	42, 356, 1609
SatI	GCNGC	2 cut(s)	14, 960
Sau3AI	GATC	6 cut(s)	134, 211, 739, 757, 1225, 1516
Sau96I	GGNCC	5 cut(s)	61, 313, 391, 1204, 1511
SchI	GAGTC	3 cut(s)	301, 569, 1278
ScrFI	CCNGG	2 cut(s)	484, 533
SduI	GDGCHC	1 cut(s)	809
SfaNI	GCATC	4 cut(s)	858, 880, 946, 1045
SfuI	TTCGAA	1 cut(s)	1492
SinI	GGWCC	4 cut(s)	61, 391, 1204, 1511
SmiMI	CAYNNNNRTG	2 cut(s)	102, 568
SmlI	CTYRAG	1 cut(s)	1134
SmoI	CTYRAG	1 cut(s)	1134
SsiI	CCGC	2 cut(s)	659, 879
SspI	AATATT	1 cut(s)	1160
SspMI	CTAG	2 cut(s)	567, 1398
SstI	GAGCTC	1 cut(s)	809
StyD4I	CCNGG	2 cut(s)	482, 531
StyI	CCWWGG	2 cut(s)	625, 1419
TaaI	ACNGT	1 cut(s)	1438
TaqI	TCGA	4 cut(s)	678, 687, 1330, 1492
TaqII	GACCGA	1 cut(s)	575
TatI	WGTACW	1 cut(s)	158
TfiI	GAWTC	4 cut(s)	451, 1295, 1385, 1494
Tru1I	TTAA	3 cut(s)	42, 356, 1609
Tru9I	TTAA	3 cut(s)	42, 356, 1609
TscAI	CASTG	4 cut(s)	177, 235, 276, 1538
TseFI	GTSAC	1 cut(s)	561
TseI	GCWGC	2 cut(s)	13, 959
Tsp45I	GTSAC	1 cut(s)	561
TspGWI	ACGGA	1 cut(s)	419
TspRI	CASTG	4 cut(s)	177, 235, 276, 1538
VpaK11BI	GGWCC	4 cut(s)	61, 391, 1204, 1511
VspI	ATTAAT	1 cut(s)	42
XapI	RAATTY	6 cut(s)	369, 599, 663, 689, 964, 1301
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1047, 1505
XmnI	GAANNNNTTC	1 cut(s)	1326
XspI	CTAG	2 cut(s)	567, 1398
Zsp2I	ATGCAT	1 cut(s)	873

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.