Rw3G020660
RLK Family

Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000146
Physical Location & Seq
Reverse (-)
24463924 .. 24465254
1331 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G020660.1

Sequence Viewer

Length: 1020 bp
ATGTCTGTCCATCTTCGTGGCATACACAAGATGGGGCATGTGAATGGAACAACCAAAGCTCCTAGTGAGACAGATGTGGAAGCCTATGCTAAGTGGGAGGATGATGATGGATCGGTGATGGCTCTTCTGTTCAAAGCCATGAATGAAGATGTTTTACAGTTGGTGGAAGAGTGTGAGACAGCTGAAACAATATGGAAGACATTGGGGGATCTGTATACCAATGAGTCTGATTTTATACAAGTTCATGAATTGATGTGTAAAGCAGCTAGTATGCAACAGAATGGGCAACTAGTAGCTGTGTATTTCACCAAGCTGAAGAATGTATGGGCGGAGATTGATCAGAAGCGTCCTTGCAAGATCAAGAATCAGGAAGATCTTGTGTGGTACCAGAAGGAGAAGGAGCTAGAACGAGTTCATGTATTCCTGAGAGGGGTTGATGAGAAGCATAGCAGTGCCAAGGGAGAATTGCTCAGAATGACAGACCCTCCTAGTTTGACCACAGTTTTTACATACATCCACAAGGATGAGTCTCAGCAAGAAAGTGTCAAACATGCACAGGTTGAAGTATCTAGCCTAGCCATTCAGGCCAAGTCACCGGCACCTTTCCTTCAGCAGCAGAGTTCAGCCCCACTTCATCAGCAAGGTTTCCCACAAGGCTTCACCAACCGCCCTCGTCCTCAATGTACTTATTGCAACGACCTTGGGCATGTTCGGGAGACTTGTTGGAAGTTGAACCCACACCTTAAACGTAAGAAGCAAGGTTATCGTCCTAGAGGGAAAGCGGCTGCGGTTCAGTTGGTCCAAGAACCCGATTTCTATGGAGTAACTGGCCAAGATCATCATACAGCAGGTGGAGCTACTCCTACAGCCTCTATAGCTGGTCGAGGTAAAATTGGATCTTCTCACCAGGGAGATAATCGGTCGGGGGTATCTGAGGGGCAGGTTGTTCCATCTGGATCAGACATACGCAGGGGAGAAACCAGGAGCACAGTCCCGCGCCGCTTTGACTTCGAGTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotran_gag_2

Protein Analysis

339

Amino Acids

38.06

Weight (kDa)

6.93

Isoelectric Point (pI)

46.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 11 - 111 1.4e-10 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000146)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19561 FvH4_1g25371 FvH4_1g25961 FvH4_2g00352 FvH4_2g00861 FvH4_2g04952 FvH4_2g05413 FvH4_2g07531 FvH4_2g08961 FvH4_2g25141 FvH4_2g27292 FvH4_3g18164 FvH4_3g19921 FvH4_3g43870 FvH4_4g14441 FvH4_4g15581 FvH4_4g15582 FvH4_4g16890 FvH4_4g19782 FvH4_4g33444 FvH4_4g33921 FvH4_5g22281 FvH4_5g22282 FvH4_5g32571 FvH4_5g37451 FvH4_5g39631 FvH4_6g04721 FvH4_6g11661 FvH4_6g20571 FvH4_6g32791 FvH4_7g23184
prunus_persica Prupe.1G090900_v2.0.a1 Prupe.1G241200_v2.0.a1 Prupe.1G534100_v2.0.a1 Prupe.3G076700_v2.0.a1 Prupe.4G150800_v2.0.a1 Prupe.4G181800_v2.0.a1 Prupe.4G240900_v2.0.a1 Prupe.4G247600_v2.0.a1 Prupe.6G115900_v2.0.a1 Prupe.6G327500_v2.0.a1 Prupe.8G071700_v2.0.a1
pyrus_communis pycom06g11480 pycom10g08330 pycom15g04320 pycom15g04350 pycom15g12620 pycom2874g00060
rosa_chinensis RchiOBHm_Chr1g0317241 RchiOBHm_Chr1g0341801 RchiOBHm_Chr1g0341931 RchiOBHm_Chr1g0359621 RchiOBHm_Chr2g0113741 RchiOBHm_Chr2g0117261 RchiOBHm_Chr2g0138831 RchiOBHm_Chr2g0141421 RchiOBHm_Chr2g0145281 RchiOBHm_Chr2g0152991 RchiOBHm_Chr3g0448001 RchiOBHm_Chr3g0450981 RchiOBHm_Chr3g0455161 RchiOBHm_Chr3g0457401 RchiOBHm_Chr3g0460001 RchiOBHm_Chr4g0387431 RchiOBHm_Chr4g0388741 RchiOBHm_Chr4g0444201 RchiOBHm_Chr4g0444261 RchiOBHm_Chr5g0010221 RchiOBHm_Chr6g0271721 RchiOBHm_Chr6g0274641 RchiOBHm_Chr6g0294691 RchiOBHm_Chr7g0237031 RchiOBHm_Chr7g0238461 RchiOBHm_Chr7g0239981
rosa_laevigata RLG00000009017
rosa_multiflora Rmu_co7986768.1_g000001 Rmu_co8302239.1_g000001 Rmu_co8485799.1_g000001 Rmu_sc0000061.1_g000013 Rmu_sc0000303.1_g000034 Rmu_sc0000303.1_g000035 Rmu_sc0000315.1_g000017 Rmu_sc0000349.1_g000003 Rmu_sc0000498.1_g000068 Rmu_sc0000508.1_g000014 Rmu_sc0000602.1_g000001 Rmu_sc0000633.1_g000002 Rmu_sc0000638.1_g000030 Rmu_sc0000756.1_g000016 Rmu_sc0000756.1_g000017 Rmu_sc0000785.1_g000037 Rmu_sc0000795.1_g000017 Rmu_sc0000796.1_g000030 Rmu_sc0000863.1_g000023 Rmu_sc0000920.1_g000021 Rmu_sc0000960.1_g000015 Rmu_sc0000982.1_g000102 Rmu_sc0001036.1_g000008 Rmu_sc0001036.1_g000009 Rmu_sc0001643.1_g000029 Rmu_sc0001687.1_g000026 Rmu_sc0001708.1_g000037 Rmu_sc0001768.1_g000015 Rmu_sc0001790.1_g000022 Rmu_sc0002180.1_g000007 Rmu_sc0002211.1_g000006 Rmu_sc0002270.1_g000010 Rmu_sc0002404.1_g000031 Rmu_sc0002858.1_g000016 Rmu_sc0003063.1_g000028 Rmu_sc0003730.1_g000017 Rmu_sc0004087.1_g000020 Rmu_sc0004618.1_g000048 Rmu_sc0004724.1_g000005 Rmu_sc0005167.1_g000036 Rmu_sc0005781.1_g000003 Rmu_sc0005878.1_g000012 Rmu_sc0006011.1_g000003 Rmu_sc0006343.1_g000011 Rmu_sc0006573.1_g000007 Rmu_sc0006599.1_g000007 Rmu_sc0006803.1_g000014 Rmu_sc0006836.1_g000002 Rmu_sc0006849.1_g000002 Rmu_sc0007109.1_g000009 Rmu_sc0009268.1_g000016 Rmu_sc0009618.1_g000017 Rmu_sc0009674.1_g000009 Rmu_sc0010244.1_g000009 Rmu_sc0011151.1_g000004 Rmu_sc0011356.1_g000001 Rmu_sc0011674.1_g000002 Rmu_sc0011778.1_g000016 Rmu_sc0012342.1_g000001 Rmu_sc0012467.1_g000002 Rmu_sc0012574.1_g000003 Rmu_sc0012913.1_g000005 Rmu_sc0013612.1_g000020 Rmu_sc0014824.1_g000001 Rmu_sc0017869.1_g000002 Rmu_sc0018085.1_g000003 Rmu_sc0024789.1_g000001 Rmu_sc0025106.1_g000013 Rmu_sc0034502.1_g000001 Rmu_sc0034547.1_g000001 Rmu_sc0035094.1_g000001 Rmu_sc0035095.1_g000001 Rmu_ssc0000100.1_g000027 Rmu_ssc0000244.1_g000005 Rmu_ssc0000371.1_g000029 Rmu_ssc0000381.1_g000004
rosa_roxburghii Rroxscaffold_1G00015480 Rroxscaffold_1G00023580 Rroxscaffold_1G00039340 Rroxscaffold_1G00047080 Rroxscaffold_2G00095820 Rroxscaffold_2G00125200 Rroxscaffold_2G00128330 Rroxscaffold_3G00270860
rosa_rugosa Rorug06G0120700
rosa_samantha Rh3BG173100 Rh6AG089600 Rh7AG488100 Rh7DG389600
rosa_wichuraiana Rw0G001150 Rw0G001990 Rw0G002010 Rw0G019540 Rw1G013730 Rw1G024110 Rw1G029190 Rw2G018850 Rw2G021090 Rw2G022260 Rw2G023180 Rw2G027280 Rw3G010190 Rw3G020660 Rw3G029380 Rw4G002390 Rw4G002690 Rw4G033260 Rw5G011960 Rw5G023110 Rw5G025250 Rw5G028950 Rw5G033740 Rw5G033950 Rw5G037900 Rw6G009640 Rw6G011620 Rw6G027720 Rw7G010680 Rw7G042070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 839
Acc36I ACCTGC 2 cut(s) 839, 931
Acc65I GGTACC 1 cut(s) 384
AccB1I GGYRCC 2 cut(s) 384, 598
AccI GTMKAC 1 cut(s) 215
AccII CGCG 1 cut(s) 997
AciI CCGC 6 cut(s) 329, 667, 782, 788, 995, 1000
AclWI GGATC 4 cut(s) 118, 216, 904, 964
AcoI YGGCCR 1 cut(s) 829
AcuI CTGAAG 2 cut(s) 335, 593
AfaI GTAC 2 cut(s) 386, 685
AfiI CCNNNNNNNGG 1 cut(s) 430
AgsI TTSAA 3 cut(s) 133, 563, 733
AhlI ACTAGT 1 cut(s) 289
AjnI CCWGG 2 cut(s) 906, 980
AluBI AGCT 8 cut(s) 59, 182, 266, 296, 313, 403, 857, 878
AluI AGCT 8 cut(s) 59, 182, 266, 296, 313, 403, 857, 878
Alw21I GWGCWC 1 cut(s) 989
Alw26I GTCTC 4 cut(s) 62, 170, 534, 710
AlwI GGATC 4 cut(s) 118, 216, 904, 964
AoxI GGCC 2 cut(s) 585, 829
ApeKI GCWGC 3 cut(s) 263, 613, 785
Asp700I GAANNNNTTC 1 cut(s) 411
Asp718I GGTACC 1 cut(s) 384
AspLEI GCGC 1 cut(s) 999
AspS9I GGNCC 1 cut(s) 799
AsuHPI GGTGA 5 cut(s) 127, 298, 585, 652, 896
AvaII GGWCC 1 cut(s) 799
BalI TGGCCA 1 cut(s) 831
BanI GGYRCC 2 cut(s) 384, 598
BarI GAAGNNNNNNTAC 2 cut(s) 138, 170
BbsI GAAGAC 1 cut(s) 203
Bbv12I GWGCWC 1 cut(s) 989
BbvI GCAGC 3 cut(s) 275, 625, 772
BccI CCATC 5 cut(s) 18, 25, 101, 112, 958
BcgI CGANNNNNNTGC 2 cut(s) 746, 780
BciT130I CCWGG 2 cut(s) 908, 982
BclI TGATCA 1 cut(s) 337
BcoDI GTCTC 4 cut(s) 62, 170, 534, 710
BcuI ACTAGT 1 cut(s) 289
BfaI CTAG 8 cut(s) 63, 267, 290, 404, 489, 570, 575, 771
BfmI CTRYAG 2 cut(s) 864, 873
BfuAI ACCTGC 2 cut(s) 839, 931
BglI GCCNNNNNGGC 1 cut(s) 584
BglII AGATCT 1 cut(s) 373
BisI GCNGC 5 cut(s) 264, 614, 783, 786, 1000
BlsI GCNGC 5 cut(s) 265, 615, 784, 787, 1001
Bme1390I CCNGG 2 cut(s) 908, 982
Bme18I GGWCC 1 cut(s) 799
BmgT120I GGNCC 1 cut(s) 799
BmiI GGNNCC 2 cut(s) 386, 600
BmrFI CCNGG 2 cut(s) 908, 982
BpiI GAAGAC 1 cut(s) 203
BplI GAGNNNNNCTC 2 cut(s) 453, 485
BsaJI CCNNGG 3 cut(s) 456, 700, 907
BsaXI ACNNNNNCTCC 4 cut(s) 43, 73, 469, 499
Bsc4I CCNNNNNNNGG 1 cut(s) 430
Bse118I RCCGGY 1 cut(s) 595
Bse1I ACTGG 1 cut(s) 832
BseBI CCWGG 2 cut(s) 908, 982
BseDI CCNNGG 3 cut(s) 456, 700, 907
BseGI GGATG 3 cut(s) 106, 513, 529
BseLI CCNNNNNNNGG 1 cut(s) 430
BseMII CTCAG 4 cut(s) 416, 484, 545, 924
BseNI ACTGG 1 cut(s) 832
BseXI GCAGC 3 cut(s) 275, 625, 772
Bsh1236I CGCG 1 cut(s) 997
Bsh1285I CGRYCG 1 cut(s) 923
BshFI GGCC 2 cut(s) 587, 831
BshNI GGYRCC 2 cut(s) 384, 598
BsiEI CGRYCG 1 cut(s) 923
BsiHKAI GWGCWC 1 cut(s) 989
BsiSI CCGG 1 cut(s) 596
BslFI GGGAC 1 cut(s) 977
BslI CCNNNNNNNGG 1 cut(s) 430
BsmAI GTCTC 4 cut(s) 62, 170, 534, 710
BsmFI GGGAC 1 cut(s) 977
BsnI GGCC 2 cut(s) 587, 831
Bsp1286I GDGCHC 1 cut(s) 989
Bsp143I GATC 8 cut(s) 110, 208, 337, 357, 373, 835, 896, 956
BspACI CCGC 6 cut(s) 329, 667, 782, 788, 995, 1000
BspANI GGCC 2 cut(s) 587, 831
BspCNI CTCAG 4 cut(s) 417, 483, 544, 925
BspFNI CGCG 1 cut(s) 997
BspHI TCATGA 1 cut(s) 244
BspLI GGNNCC 2 cut(s) 386, 600
BspMI ACCTGC 2 cut(s) 839, 931
BspPI GGATC 4 cut(s) 118, 216, 904, 964
BspQI GCTCTTC 1 cut(s) 129
BspT107I GGYRCC 2 cut(s) 384, 598
BsrFI RCCGGY 1 cut(s) 595
BsrI ACTGG 1 cut(s) 832
BssAI RCCGGY 1 cut(s) 595
BssECI CCNNGG 3 cut(s) 456, 700, 907
BssMI GATC 8 cut(s) 110, 208, 337, 357, 373, 835, 896, 956
BssNAI GTATAC 1 cut(s) 216
BssT1I CCWWGG 2 cut(s) 456, 700
Bst1107I GTATAC 1 cut(s) 216
Bst2UI CCWGG 2 cut(s) 908, 982
Bst4CI ACNGT 3 cut(s) 159, 502, 991
Bst6I CTCTTC 2 cut(s) 129, 162
BstDEI CTNAG 5 cut(s) 90, 425, 470, 531, 933
BstF5I GGATG 3 cut(s) 106, 513, 529
BstFNI CGCG 1 cut(s) 997
BstHHI GCGC 1 cut(s) 999
BstKTI GATC 8 cut(s) 113, 211, 340, 360, 376, 838, 899, 959
BstMAI GTCTC 4 cut(s) 62, 170, 534, 710
BstMBI GATC 8 cut(s) 110, 208, 337, 357, 373, 835, 896, 956
BstMCI CGRYCG 1 cut(s) 923
BstMWI GCNNNNNNNGC 3 cut(s) 584, 854, 875
BstNI CCWGG 2 cut(s) 908, 982
BstNSI RCATGY 3 cut(s) 41, 554, 710
BstSCI CCNGG 2 cut(s) 906, 980
BstSFI CTRYAG 2 cut(s) 864, 873
BstUI CGCG 1 cut(s) 997
BstV1I GCAGC 3 cut(s) 275, 625, 772
BstV2I GAAGAC 1 cut(s) 203
BstX2I RGATCY 3 cut(s) 208, 373, 896
BstXI CCANNNNNNTGG 1 cut(s) 17
BstYI RGATCY 3 cut(s) 208, 373, 896
BstZ17I GTATAC 1 cut(s) 216
BsuRI GGCC 2 cut(s) 587, 831
BtsCI GGATG 3 cut(s) 106, 513, 529
BtsI GCAGTG 1 cut(s) 457
BtsIMutI CAGTG 1 cut(s) 457
BveI ACCTGC 2 cut(s) 839, 931
CciI TCATGA 1 cut(s) 244
CfoI GCGC 1 cut(s) 999
Cfr10I RCCGGY 1 cut(s) 595
Cfr13I GGNCC 1 cut(s) 799
CseI GACGC 1 cut(s) 335
Csp6I GTAC 2 cut(s) 385, 684
CviAII CATG 6 cut(s) 38, 139, 245, 416, 551, 707
CviQI GTAC 2 cut(s) 385, 684
DdeI CTNAG 5 cut(s) 90, 425, 470, 531, 933
DpnI GATC 8 cut(s) 112, 210, 339, 359, 375, 837, 898, 958
DpnII GATC 8 cut(s) 110, 208, 337, 357, 373, 835, 896, 956
EaeI YGGCCR 1 cut(s) 829
Eam1104I CTCTTC 2 cut(s) 129, 162
EarI CTCTTC 2 cut(s) 129, 162
EciI GGCGGA 1 cut(s) 344
Eco130I CCWWGG 2 cut(s) 456, 700
Eco47I GGWCC 1 cut(s) 799
Eco57I CTGAAG 2 cut(s) 335, 593
EcoRII CCWGG 2 cut(s) 906, 980
EcoT14I CCWWGG 2 cut(s) 456, 700
ErhI CCWWGG 2 cut(s) 456, 700
FaeI CATG 6 cut(s) 41, 142, 248, 419, 554, 710
FaqI GGGAC 1 cut(s) 977
FatI CATG 6 cut(s) 37, 138, 244, 415, 550, 706
FauI CCCGC 1 cut(s) 1002
FbaI TGATCA 1 cut(s) 337
FblI GTMKAC 1 cut(s) 215
Fnu4HI GCNGC 5 cut(s) 264, 614, 783, 786, 1000
FokI GGATG 3 cut(s) 113, 500, 536
Fsp4HI GCNGC 5 cut(s) 264, 614, 783, 786, 1000
FspBI CTAG 8 cut(s) 63, 267, 290, 404, 489, 570, 575, 771
GlaI GCGC 1 cut(s) 998
GluI GCNGC 5 cut(s) 264, 614, 783, 786, 1000
HaeIII GGCC 2 cut(s) 587, 831
HapII CCGG 1 cut(s) 596
HgaI GACGC 1 cut(s) 335
HhaI GCGC 1 cut(s) 999
Hin1II CATG 6 cut(s) 41, 142, 248, 419, 554, 710
Hin6I GCGC 1 cut(s) 997
HinP1I GCGC 1 cut(s) 997
HinfI GANTC 3 cut(s) 224, 364, 527
HpaII CCGG 1 cut(s) 596
HphI GGTGA 5 cut(s) 127, 298, 585, 652, 896
Hpy166II GTNNAC 1 cut(s) 216
Hpy188I TCNGA 6 cut(s) 229, 342, 473, 934, 961, 1019
Hpy188III TCNNGA 6 cut(s) 245, 361, 368, 424, 713, 954
Hpy8I GTNNAC 1 cut(s) 216
HpyAV CCTTC 3 cut(s) 385, 391, 617
HpyCH4III ACNGT 3 cut(s) 159, 502, 991
HpyCH4IV ACGT 1 cut(s) 748
HpyCH4V TGCA 4 cut(s) 274, 354, 554, 693
HpyF10VI GCNNNNNNNGC 3 cut(s) 584, 854, 875
HpyF3I CTNAG 5 cut(s) 90, 425, 470, 531, 933
HpySE526I ACGT 1 cut(s) 748
Hsp92II CATG 6 cut(s) 41, 142, 248, 419, 554, 710
HspAI GCGC 1 cut(s) 997
KpnI GGTACC 1 cut(s) 388
Ksp22I TGATCA 1 cut(s) 337
Kzo9I GATC 8 cut(s) 110, 208, 337, 357, 373, 835, 896, 956
LguI GCTCTTC 1 cut(s) 129
LmnI GCTCC 4 cut(s) 64, 400, 854, 984
Lsp1109I GCAGC 3 cut(s) 275, 625, 772
MaeI CTAG 8 cut(s) 63, 267, 290, 404, 489, 570, 575, 771
MaeII ACGT 1 cut(s) 748
MaeIII GTNAC 2 cut(s) 591, 823
MalI GATC 8 cut(s) 112, 210, 339, 359, 375, 837, 898, 958
MboI GATC 8 cut(s) 110, 208, 337, 357, 373, 835, 896, 956
MboII GAAGA 8 cut(s) 5, 116, 158, 179, 208, 328, 383, 891
MflI RGATCY 3 cut(s) 208, 373, 896
MhlI GDGCHC 1 cut(s) 989
MlsI TGGCCA 1 cut(s) 831
MluCI AATT 3 cut(s) 248, 464, 891
MluNI TGGCCA 1 cut(s) 831
MlyI GAGTC 2 cut(s) 233, 536
MmeI TCCRAC 1 cut(s) 704
MnlI CCTC 9 cut(s) 91, 422, 495, 681, 687, 767, 878, 880, 928
Mox20I TGGCCA 1 cut(s) 831
MroXI GAANNNNTTC 1 cut(s) 411
MscI TGGCCA 1 cut(s) 831
MseI TTAA 1 cut(s) 744
MslI CAYNNNNRTG 4 cut(s) 15, 42, 450, 522
Msp20I TGGCCA 1 cut(s) 831
MspA1I CMGCKG 1 cut(s) 182
MspI CCGG 1 cut(s) 596
MspR9I CCNGG 2 cut(s) 908, 982
MvaI CCWGG 2 cut(s) 908, 982
MvnI CGCG 1 cut(s) 997
MwoI GCNNNNNNNGC 3 cut(s) 584, 854, 875
NdeII GATC 8 cut(s) 110, 208, 337, 357, 373, 835, 896, 956
NlaIII CATG 6 cut(s) 41, 142, 248, 419, 554, 710
NlaIV GGNNCC 2 cut(s) 386, 600
NmuCI GTSAC 1 cut(s) 591
NspI RCATGY 3 cut(s) 41, 554, 710
PagI TCATGA 1 cut(s) 244
PaqCI CACCTGC 1 cut(s) 839
PciSI GCTCTTC 1 cut(s) 129
PdmI GAANNNNTTC 1 cut(s) 411
PfeI GAWTC 1 cut(s) 364
PkrI GCNGC 5 cut(s) 265, 615, 784, 787, 1001
PleI GAGTC 2 cut(s) 232, 535
PpsI GAGTC 2 cut(s) 232, 535
Psp6I CCWGG 2 cut(s) 906, 980
PspGI CCWGG 2 cut(s) 906, 980
PspN4I GGNNCC 2 cut(s) 386, 600
PspPI GGNCC 1 cut(s) 799
PsuI RGATCY 3 cut(s) 208, 373, 896
PvuII CAGCTG 1 cut(s) 182
RsaI GTAC 2 cut(s) 386, 685
RsaNI GTAC 2 cut(s) 385, 684
RseI CAYNNNNRTG 4 cut(s) 15, 42, 450, 522
SapI GCTCTTC 1 cut(s) 129
SaqAI TTAA 1 cut(s) 744
SatI GCNGC 5 cut(s) 264, 614, 783, 786, 1000
Sau3AI GATC 8 cut(s) 110, 208, 337, 357, 373, 835, 896, 956
Sau96I GGNCC 1 cut(s) 799
SchI GAGTC 2 cut(s) 233, 536
ScrFI CCNGG 2 cut(s) 908, 982
SduI GDGCHC 1 cut(s) 989
SfcI CTRYAG 2 cut(s) 864, 873
SinI GGWCC 1 cut(s) 799
SmiMI CAYNNNNRTG 4 cut(s) 15, 42, 450, 522
SpeI ACTAGT 1 cut(s) 289
Sse9I AATT 3 cut(s) 248, 464, 891
SsiI CCGC 6 cut(s) 329, 667, 782, 788, 995, 1000
SspMI CTAG 8 cut(s) 63, 267, 290, 404, 489, 570, 575, 771
StyD4I CCNGG 2 cut(s) 906, 980
StyI CCWWGG 2 cut(s) 456, 700
TaaI ACNGT 3 cut(s) 159, 502, 991
TaiI ACGT 1 cut(s) 751
TaqI TCGA 2 cut(s) 883, 1011
TaqII GACCGA 1 cut(s) 909
TasI AATT 3 cut(s) 248, 464, 891
TatI WGTACW 1 cut(s) 683
TauI GCSGC 2 cut(s) 785, 1002
TfiI GAWTC 1 cut(s) 364
Tru1I TTAA 1 cut(s) 744
Tru9I TTAA 1 cut(s) 744
TscAI CASTG 1 cut(s) 457
TseFI GTSAC 1 cut(s) 591
TseI GCWGC 3 cut(s) 263, 613, 785
Tsp45I GTSAC 1 cut(s) 591
TspDTI ATGAA 6 cut(s) 155, 159, 233, 261, 404, 623
TspRI CASTG 1 cut(s) 457
VpaK11BI GGWCC 1 cut(s) 799
XceI RCATGY 3 cut(s) 41, 554, 710
XmiI GTMKAC 1 cut(s) 215
XmnI GAANNNNTTC 1 cut(s) 411
XspI CTAG 8 cut(s) 63, 267, 290, 404, 489, 570, 575, 771
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.