Rmu_ssc0000244.1_g000005

regulation of response to stimulus

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000244.1
OG0000146
Physical Location & Seq
Reverse (-)
28721 .. 34546
5826 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000244.1_g000005.1.cds

Sequence Viewer

Length: 1266 bp
atgcttcgattgaggtccaactttctagccggacacatctctcaccagttgtgctatctcaccgacctgcatatcctagacgttggtgacaacaacttttcagggactattcccaggtgtttgaataacttgactttcctaacattccgtgacagccaccaaacggattacatatatacaggagaatcaacaaggatgacactgagaggaagtgaactcgactatacaatcagcaacttgtacttgctgaagagcattgatctttcatcaaataatttagaaggtggaattcctgaacaaataagcagcctcgttggattgggagccctaaacttgtcgatgaatcaattgagtgggaatatttccaccaagattggaaacttgcgttggttggaaactcttgatctctcacacaaccatctttcgggacagattcctcaaagcttgtcttctttgacctttttgtcacacttgaacttgtcttataacaacctgtccggaagaatcccttcaggcccccaactccaaacacaagagaattcatcatatgtggggaatccatcgctctgtggatttcctctttcaaccaagtgcgaggggtatgacaaacctacacaacaaactttgctcagaggagacagtgaagatgaagatgacaacgggaatcttggtttctatatcagcatggtcattggttgctcacctgccaagaccggcgattttttcaatacagatcgccttcgtcttcagctcagactcaagtcaacgacttcatctctacaagccgctccaatcccagtcgcagttctcgtcccatcgctttgcccagaccagacccagcaagttactttgggcacctacccaaagatcgattctccagatccgttttttccagattgtgatcctcttctctgccacgttcttttcgtcagcccttacaccggtcgtgcccagacgacccaccttcggtcgtctgccccaatctccggcctagaacaacgaaggtggttctttcgagggtaccaaactcactggtaccaatttaagatcaagaatcaggaagatctggtgtggtaccagaaggagaaggagctagaaagggttcatgtatttctgagagggcttgatgagaagcatagcagtgccaagggagaattgctcagaatgacagaccctcctagtttgaacacagcttttacatacatccgcaaggatgagtctcagcaggaaagtgtcaaacatgcacaggttgaagtatctagctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

421

Amino Acids

47.28

Weight (kDa)

6.0

Isoelectric Point (pI)

44.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000146)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19561 FvH4_1g25371 FvH4_1g25961 FvH4_2g00352 FvH4_2g00861 FvH4_2g04952 FvH4_2g05413 FvH4_2g07531 FvH4_2g08961 FvH4_2g25141 FvH4_2g27292 FvH4_3g18164 FvH4_3g19921 FvH4_3g43870 FvH4_4g14441 FvH4_4g15581 FvH4_4g15582 FvH4_4g16890 FvH4_4g19782 FvH4_4g33444 FvH4_4g33921 FvH4_5g22281 FvH4_5g22282 FvH4_5g32571 FvH4_5g37451 FvH4_5g39631 FvH4_6g04721 FvH4_6g11661 FvH4_6g20571 FvH4_6g32791 FvH4_7g23184
prunus_persica Prupe.1G090900_v2.0.a1 Prupe.1G241200_v2.0.a1 Prupe.1G534100_v2.0.a1 Prupe.3G076700_v2.0.a1 Prupe.4G150800_v2.0.a1 Prupe.4G181800_v2.0.a1 Prupe.4G240900_v2.0.a1 Prupe.4G247600_v2.0.a1 Prupe.6G115900_v2.0.a1 Prupe.6G327500_v2.0.a1 Prupe.8G071700_v2.0.a1
pyrus_communis pycom06g11480 pycom10g08330 pycom15g04320 pycom15g04350 pycom15g12620 pycom2874g00060
rosa_chinensis RchiOBHm_Chr1g0317241 RchiOBHm_Chr1g0341801 RchiOBHm_Chr1g0341931 RchiOBHm_Chr1g0359621 RchiOBHm_Chr2g0113741 RchiOBHm_Chr2g0117261 RchiOBHm_Chr2g0138831 RchiOBHm_Chr2g0141421 RchiOBHm_Chr2g0145281 RchiOBHm_Chr2g0152991 RchiOBHm_Chr3g0448001 RchiOBHm_Chr3g0450981 RchiOBHm_Chr3g0455161 RchiOBHm_Chr3g0457401 RchiOBHm_Chr3g0460001 RchiOBHm_Chr4g0387431 RchiOBHm_Chr4g0388741 RchiOBHm_Chr4g0444201 RchiOBHm_Chr4g0444261 RchiOBHm_Chr5g0010221 RchiOBHm_Chr6g0271721 RchiOBHm_Chr6g0274641 RchiOBHm_Chr6g0294691 RchiOBHm_Chr7g0237031 RchiOBHm_Chr7g0238461 RchiOBHm_Chr7g0239981
rosa_laevigata RLG00000009017
rosa_multiflora Rmu_co7986768.1_g000001 Rmu_co8302239.1_g000001 Rmu_co8485799.1_g000001 Rmu_sc0000061.1_g000013 Rmu_sc0000303.1_g000034 Rmu_sc0000303.1_g000035 Rmu_sc0000315.1_g000017 Rmu_sc0000349.1_g000003 Rmu_sc0000498.1_g000068 Rmu_sc0000508.1_g000014 Rmu_sc0000602.1_g000001 Rmu_sc0000633.1_g000002 Rmu_sc0000638.1_g000030 Rmu_sc0000756.1_g000016 Rmu_sc0000756.1_g000017 Rmu_sc0000785.1_g000037 Rmu_sc0000795.1_g000017 Rmu_sc0000796.1_g000030 Rmu_sc0000863.1_g000023 Rmu_sc0000920.1_g000021 Rmu_sc0000960.1_g000015 Rmu_sc0000982.1_g000102 Rmu_sc0001036.1_g000008 Rmu_sc0001036.1_g000009 Rmu_sc0001643.1_g000029 Rmu_sc0001687.1_g000026 Rmu_sc0001708.1_g000037 Rmu_sc0001768.1_g000015 Rmu_sc0001790.1_g000022 Rmu_sc0002180.1_g000007 Rmu_sc0002211.1_g000006 Rmu_sc0002270.1_g000010 Rmu_sc0002404.1_g000031 Rmu_sc0002858.1_g000016 Rmu_sc0003063.1_g000028 Rmu_sc0003730.1_g000017 Rmu_sc0004087.1_g000020 Rmu_sc0004618.1_g000048 Rmu_sc0004724.1_g000005 Rmu_sc0005167.1_g000036 Rmu_sc0005781.1_g000003 Rmu_sc0005878.1_g000012 Rmu_sc0006011.1_g000003 Rmu_sc0006343.1_g000011 Rmu_sc0006573.1_g000007 Rmu_sc0006599.1_g000007 Rmu_sc0006803.1_g000014 Rmu_sc0006836.1_g000002 Rmu_sc0006849.1_g000002 Rmu_sc0007109.1_g000009 Rmu_sc0009268.1_g000016 Rmu_sc0009618.1_g000017 Rmu_sc0009674.1_g000009 Rmu_sc0010244.1_g000009 Rmu_sc0011151.1_g000004 Rmu_sc0011356.1_g000001 Rmu_sc0011674.1_g000002 Rmu_sc0011778.1_g000016 Rmu_sc0012342.1_g000001 Rmu_sc0012467.1_g000002 Rmu_sc0012574.1_g000003 Rmu_sc0012913.1_g000005 Rmu_sc0013612.1_g000020 Rmu_sc0014824.1_g000001 Rmu_sc0017869.1_g000002 Rmu_sc0018085.1_g000003 Rmu_sc0024789.1_g000001 Rmu_sc0025106.1_g000013 Rmu_sc0034502.1_g000001 Rmu_sc0034547.1_g000001 Rmu_sc0035094.1_g000001 Rmu_sc0035095.1_g000001 Rmu_ssc0000100.1_g000027 Rmu_ssc0000244.1_g000005 Rmu_ssc0000371.1_g000029 Rmu_ssc0000381.1_g000004
rosa_roxburghii Rroxscaffold_1G00015480 Rroxscaffold_1G00023580 Rroxscaffold_1G00039340 Rroxscaffold_1G00047080 Rroxscaffold_2G00095820 Rroxscaffold_2G00125200 Rroxscaffold_2G00128330 Rroxscaffold_3G00270860
rosa_rugosa Rorug06G0120700
rosa_samantha Rh3BG173100 Rh6AG089600 Rh7AG488100 Rh7DG389600
rosa_wichuraiana Rw0G001150 Rw0G001990 Rw0G002010 Rw0G019540 Rw1G013730 Rw1G024110 Rw1G029190 Rw2G018850 Rw2G021090 Rw2G022260 Rw2G023180 Rw2G027280 Rw3G010190 Rw3G020660 Rw3G029380 Rw4G002390 Rw4G002690 Rw4G033260 Rw5G011960 Rw5G023110 Rw5G025250 Rw5G028950 Rw5G033740 Rw5G033950 Rw5G037900 Rw6G009640 Rw6G011620 Rw6G027720 Rw7G010680 Rw7G042070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 486
AarI CACCTGC 1 cut(s) 712
AasI GACNNNNNNGTC 1 cut(s) 463
Acc36I ACCTGC 2 cut(s) 75, 712
Acc65I GGTACC 3 cut(s) 1020, 1035, 1074
AccB1I GGYRCC 4 cut(s) 854, 1020, 1035, 1074
AccBSI CCGCTC 1 cut(s) 788
AccIII TCCGGA 1 cut(s) 497
AciI CCGC 2 cut(s) 786, 1207
AclWI GGATC 2 cut(s) 875, 896
AcsI RAATTY 2 cut(s) 288, 538
AcuI CTGAAG 3 cut(s) 269, 495, 731
AfaI GTAC 4 cut(s) 242, 1022, 1037, 1076
AfiI CCNNNNNNNGG 5 cut(s) 163, 424, 941, 966, 986
AgeI ACCGGT 1 cut(s) 941
AgsI TTSAA 6 cut(s) 124, 475, 585, 727, 1186, 1253
AjnI CCWGG 1 cut(s) 113
AjuI GAANNNNNNNTTGG 4 cut(s) 370, 402, 856, 888
AluBI AGCT 5 cut(s) 444, 751, 1093, 1193, 1263
AluI AGCT 5 cut(s) 444, 751, 1093, 1193, 1263
Alw26I GTCTC 2 cut(s) 630, 1224
AlwI GGATC 2 cut(s) 875, 896
Aor13HI TCCGGA 1 cut(s) 497
AoxI GGCC 2 cut(s) 514, 988
ApeKI GCWGC 1 cut(s) 306
ApoI RAATTY 2 cut(s) 288, 538
AsiGI ACCGGT 1 cut(s) 941
Asp700I GAANNNNTTC 2 cut(s) 508, 1101
Asp718I GGTACC 3 cut(s) 1020, 1035, 1074
AspS9I GGNCC 2 cut(s) 15, 515
AsuHPI GGTGA 4 cut(s) 35, 52, 98, 693
AvaII GGWCC 1 cut(s) 15
BaeGI GKGCMC 2 cut(s) 857, 952
BanI GGYRCC 4 cut(s) 854, 1020, 1035, 1074
BanII GRGCYC 1 cut(s) 328
BbsI GAAGAC 2 cut(s) 441, 737
BbvI GCAGC 1 cut(s) 318
BccI CCATC 3 cut(s) 426, 568, 823
BciT130I CCWGG 1 cut(s) 115
BcoDI GTCTC 2 cut(s) 630, 1224
BfaI CTAG 7 cut(s) 26, 77, 992, 1094, 1179, 1260, 1264
BfuAI ACCTGC 2 cut(s) 75, 712
BglII AGATCT 1 cut(s) 1063
BisI GCNGC 2 cut(s) 307, 786
BlsI GCNGC 2 cut(s) 308, 787
Bme1390I CCNGG 1 cut(s) 115
Bme18I GGWCC 1 cut(s) 15
BmgT120I GGNCC 2 cut(s) 15, 515
BmiI GGNNCC 6 cut(s) 325, 517, 856, 1022, 1037, 1076
BmrFI CCNGG 1 cut(s) 115
BmrI ACTGGG 1 cut(s) 791
BmuI ACTGGG 1 cut(s) 791
BoxI GACNNNNGTC 1 cut(s) 760
BpiI GAAGAC 2 cut(s) 441, 737
BplI GAGNNNNNCTC 2 cut(s) 1143, 1175
BpmI CTGGAG 1 cut(s) 861
BpuEI CTTGAG 1 cut(s) 743
Bsa29I ATCGAT 1 cut(s) 870
BsaBI GATNNNNATC 1 cut(s) 900
BsaJI CCNNGG 2 cut(s) 113, 1146
BsaWI WCCGGW 2 cut(s) 497, 941
BsaXI ACNNNNNCTCC 2 cut(s) 1159, 1189
Bsc4I CCNNNNNNNGG 5 cut(s) 163, 424, 941, 966, 986
Bse118I RCCGGY 2 cut(s) 713, 941
Bse1I ACTGG 3 cut(s) 46, 797, 1037
Bse8I GATNNNNATC 1 cut(s) 900
BseAI TCCGGA 1 cut(s) 497
BseBI CCWGG 1 cut(s) 115
BseCI ATCGAT 1 cut(s) 870
BseDI CCNNGG 2 cut(s) 113, 1146
BseGI GGATG 3 cut(s) 201, 1203, 1219
BseJI GATNNNNATC 1 cut(s) 900
BseLI CCNNNNNNNGG 5 cut(s) 163, 424, 941, 966, 986
BseMII CTCAG 6 cut(s) 194, 643, 766, 1106, 1174, 1235
BseNI ACTGG 3 cut(s) 46, 797, 1037
BseRI GAGGAG 1 cut(s) 648
BseSI GKGCMC 2 cut(s) 857, 952
BseXI GCAGC 1 cut(s) 318
BseYI CCCAGC 1 cut(s) 837
Bsh1285I CGRYCG 2 cut(s) 946, 971
BshFI GGCC 2 cut(s) 516, 990
BshNI GGYRCC 4 cut(s) 854, 1020, 1035, 1074
BshTI ACCGGT 1 cut(s) 941
BshVI ATCGAT 1 cut(s) 870
BsiEI CGRYCG 2 cut(s) 946, 971
BsiSI CCGG 5 cut(s) 30, 498, 714, 942, 987
BslFI GGGAC 3 cut(s) 118, 441, 797
BslI CCNNNNNNNGG 5 cut(s) 163, 424, 941, 966, 986
BsmAI GTCTC 2 cut(s) 630, 1224
BsmFI GGGAC 3 cut(s) 118, 441, 797
BsnI GGCC 2 cut(s) 516, 990
Bsp1286I GDGCHC 3 cut(s) 328, 857, 952
Bsp13I TCCGGA 1 cut(s) 497
Bsp143I GATC 8 cut(s) 259, 403, 733, 867, 880, 901, 1047, 1063
BspACI CCGC 2 cut(s) 786, 1207
BspANI GGCC 2 cut(s) 516, 990
BspCNI CTCAG 6 cut(s) 195, 642, 765, 1107, 1173, 1234
BspDI ATCGAT 1 cut(s) 870
BspEI TCCGGA 1 cut(s) 497
BspLI GGNNCC 6 cut(s) 325, 517, 856, 1022, 1037, 1076
BspMI ACCTGC 2 cut(s) 75, 712
BspPI GGATC 2 cut(s) 875, 896
BspQI GCTCTTC 1 cut(s) 245
BspT107I GGYRCC 4 cut(s) 854, 1020, 1035, 1074
BsrBI CCGCTC 1 cut(s) 788
BsrFI RCCGGY 2 cut(s) 713, 941
BsrI ACTGG 3 cut(s) 46, 797, 1037
BssAI RCCGGY 2 cut(s) 713, 941
BssECI CCNNGG 2 cut(s) 113, 1146
BssMI GATC 8 cut(s) 259, 403, 733, 867, 880, 901, 1047, 1063
BssT1I CCWWGG 1 cut(s) 1146
Bst2UI CCWGG 1 cut(s) 115
Bst4CI ACNGT 1 cut(s) 641
Bst6I CTCTTC 2 cut(s) 245, 912
BstDEI CTNAG 6 cut(s) 203, 629, 752, 1115, 1160, 1221
BstF5I GGATG 3 cut(s) 201, 1203, 1219
BstKTI GATC 8 cut(s) 262, 406, 736, 870, 883, 904, 1050, 1066
BstMAI GTCTC 2 cut(s) 630, 1224
BstMBI GATC 8 cut(s) 259, 403, 733, 867, 880, 901, 1047, 1063
BstMCI CGRYCG 2 cut(s) 946, 971
BstNI CCWGG 1 cut(s) 115
BstNSI RCATGY 1 cut(s) 1244
BstPAI GACNNNNGTC 1 cut(s) 760
BstSCI CCNGG 1 cut(s) 113
BstSLI GKGCMC 2 cut(s) 857, 952
BstV1I GCAGC 1 cut(s) 318
BstV2I GAAGAC 2 cut(s) 441, 737
BstX2I RGATCY 2 cut(s) 880, 1063
BstYI RGATCY 2 cut(s) 880, 1063
Bsu15I ATCGAT 1 cut(s) 870
BsuRI GGCC 2 cut(s) 516, 990
BsuTUI ATCGAT 1 cut(s) 870
BtgZI GCGATG 2 cut(s) 546, 801
BtsCI GGATG 3 cut(s) 201, 1203, 1219
BtsI GCAGTG 1 cut(s) 1147
BtsIMutI CAGTG 4 cut(s) 200, 646, 1030, 1147
BveI ACCTGC 2 cut(s) 75, 712
Cfr10I RCCGGY 2 cut(s) 713, 941
Cfr13I GGNCC 2 cut(s) 15, 515
ClaI ATCGAT 1 cut(s) 870
Csp6I GTAC 4 cut(s) 241, 1021, 1036, 1075
CspAI ACCGGT 1 cut(s) 941
CspCI CAANNNNNGTGG 4 cut(s) 355, 390, 986, 1021
CviAII CATG 3 cut(s) 685, 1106, 1241
CviQI GTAC 4 cut(s) 241, 1021, 1036, 1075
DdeI CTNAG 6 cut(s) 203, 629, 752, 1115, 1160, 1221
DpnI GATC 8 cut(s) 261, 405, 735, 869, 882, 903, 1049, 1065
DpnII GATC 8 cut(s) 259, 403, 733, 867, 880, 901, 1047, 1063
DrdI GACNNNNNNGTC 1 cut(s) 463
DseDI GACNNNNNNGTC 1 cut(s) 463
Eam1104I CTCTTC 2 cut(s) 245, 912
EarI CTCTTC 2 cut(s) 245, 912
Eco130I CCWWGG 1 cut(s) 1146
Eco24I GRGCYC 1 cut(s) 328
Eco47I GGWCC 1 cut(s) 15
Eco57I CTGAAG 3 cut(s) 269, 495, 731
EcoO109I RGGNCCY 1 cut(s) 515
EcoRI GAATTC 2 cut(s) 288, 538
EcoRII CCWGG 1 cut(s) 113
EcoT14I CCWWGG 1 cut(s) 1146
EcoT38I GRGCYC 1 cut(s) 328
ErhI CCWWGG 1 cut(s) 1146
FaeI CATG 3 cut(s) 688, 1109, 1244
FalI AAGNNNNNCTT 4 cut(s) 433, 465, 493, 525
FaqI GGGAC 3 cut(s) 118, 441, 797
FatI CATG 3 cut(s) 684, 1105, 1240
FauNDI CATATG 1 cut(s) 547
Fnu4HI GCNGC 2 cut(s) 307, 786
FokI GGATG 3 cut(s) 208, 1190, 1226
FriOI GRGCYC 1 cut(s) 328
Fsp4HI GCNGC 2 cut(s) 307, 786
FspBI CTAG 7 cut(s) 26, 77, 992, 1094, 1179, 1260, 1264
GluI GCNGC 2 cut(s) 307, 786
GsaI CCCAGC 1 cut(s) 841
GsuI CTGGAG 1 cut(s) 861
HaeIII GGCC 2 cut(s) 516, 990
HapII CCGG 5 cut(s) 30, 498, 714, 942, 987
Hin1II CATG 3 cut(s) 688, 1109, 1244
HincII GTYRAC 1 cut(s) 765
HindII GTYRAC 1 cut(s) 765
HindIII AAGCTT 1 cut(s) 442
HpaII CCGG 5 cut(s) 30, 498, 714, 942, 987
HphI GGTGA 4 cut(s) 35, 52, 98, 693
Hpy166II GTNNAC 2 cut(s) 215, 765
Hpy188I TCNGA 4 cut(s) 632, 755, 1116, 1163
Hpy188III TCNNGA 8 cut(s) 293, 401, 426, 498, 878, 893, 1051, 1058
Hpy8I GTNNAC 2 cut(s) 215, 765
HpyAV CCTTC 7 cut(s) 275, 519, 749, 974, 996, 1075, 1081
HpyCH4III ACNGT 1 cut(s) 641
HpyCH4IV ACGT 2 cut(s) 81, 918
HpyCH4V TGCA 2 cut(s) 70, 1244
HpyF3I CTNAG 6 cut(s) 203, 629, 752, 1115, 1160, 1221
HpySE526I ACGT 2 cut(s) 81, 918
Hsp92II CATG 3 cut(s) 688, 1109, 1244
Kpn2I TCCGGA 1 cut(s) 497
KpnI GGTACC 3 cut(s) 1024, 1039, 1078
Kzo9I GATC 8 cut(s) 259, 403, 733, 867, 880, 901, 1047, 1063
LguI GCTCTTC 1 cut(s) 245
LmnI GCTCC 3 cut(s) 323, 793, 1090
Lsp1109I GCAGC 1 cut(s) 318
MaeI CTAG 7 cut(s) 26, 77, 992, 1094, 1179, 1260, 1264
MaeII ACGT 2 cut(s) 81, 918
MaeIII GTNAC 4 cut(s) 86, 149, 465, 844
MalI GATC 8 cut(s) 261, 405, 735, 869, 882, 903, 1049, 1065
MbiI CCGCTC 1 cut(s) 788
MboI GATC 8 cut(s) 259, 403, 733, 867, 880, 901, 1047, 1063
MboII GAAGA 8 cut(s) 262, 441, 513, 656, 662, 737, 899, 1073
MfeI CAATTG 1 cut(s) 347
MflI RGATCY 2 cut(s) 880, 1063
MhlI GDGCHC 3 cut(s) 328, 857, 952
MluCI AATT 6 cut(s) 274, 288, 347, 538, 1040, 1154
MlyI GAGTC 2 cut(s) 750, 1226
MmeI TCCRAC 3 cut(s) 42, 295, 372
MroI TCCGGA 1 cut(s) 497
MroXI GAANNNNTTC 2 cut(s) 508, 1101
MseI TTAA 1 cut(s) 1044
MslI CAYNNNNRTG 1 cut(s) 1140
MspI CCGG 5 cut(s) 30, 498, 714, 942, 987
MspR9I CCNGG 1 cut(s) 115
MunI CAATTG 1 cut(s) 347
MvaI CCWGG 1 cut(s) 115
NdeI CATATG 1 cut(s) 547
NdeII GATC 8 cut(s) 259, 403, 733, 867, 880, 901, 1047, 1063
NlaIII CATG 3 cut(s) 688, 1109, 1244
NlaIV GGNNCC 6 cut(s) 325, 517, 856, 1022, 1037, 1076
NmuCI GTSAC 3 cut(s) 86, 149, 465
NspI RCATGY 1 cut(s) 1244
PaqCI CACCTGC 1 cut(s) 712
PciSI GCTCTTC 1 cut(s) 245
PcsI WCGNNNNNNNCGW 2 cut(s) 807, 924
PdmI GAANNNNTTC 2 cut(s) 508, 1101
PfeI GAWTC 8 cut(s) 185, 343, 433, 504, 556, 664, 872, 1054
PinAI ACCGGT 1 cut(s) 941
PkrI GCNGC 2 cut(s) 308, 787
PleI GAGTC 2 cut(s) 750, 1225
PpsI GAGTC 2 cut(s) 750, 1225
PshAI GACNNNNGTC 1 cut(s) 760
PsiI TTATAA 1 cut(s) 486
Psp6I CCWGG 1 cut(s) 113
PspFI CCCAGC 1 cut(s) 837
PspGI CCWGG 1 cut(s) 113
PspN4I GGNNCC 6 cut(s) 325, 517, 856, 1022, 1037, 1076
PspPI GGNCC 2 cut(s) 15, 515
PsuI RGATCY 2 cut(s) 880, 1063
RsaI GTAC 4 cut(s) 242, 1022, 1037, 1076
RsaNI GTAC 4 cut(s) 241, 1021, 1036, 1075
RseI CAYNNNNRTG 1 cut(s) 1140
SapI GCTCTTC 1 cut(s) 245
SaqAI TTAA 1 cut(s) 1044
SatI GCNGC 2 cut(s) 307, 786
Sau3AI GATC 8 cut(s) 259, 403, 733, 867, 880, 901, 1047, 1063
Sau96I GGNCC 2 cut(s) 15, 515
SchI GAGTC 2 cut(s) 750, 1226
ScrFI CCNGG 1 cut(s) 115
SduI GDGCHC 3 cut(s) 328, 857, 952
SinI GGWCC 1 cut(s) 15
SmiMI CAYNNNNRTG 1 cut(s) 1140
SmlI CTYRAG 1 cut(s) 758
SmoI CTYRAG 1 cut(s) 758
Sse9I AATT 6 cut(s) 274, 288, 347, 538, 1040, 1154
SsiI CCGC 2 cut(s) 786, 1207
SspI AATATT 1 cut(s) 361
SspMI CTAG 7 cut(s) 26, 77, 992, 1094, 1179, 1260, 1264
StyD4I CCNGG 1 cut(s) 113
StyI CCWWGG 1 cut(s) 1146
TaaI ACNGT 1 cut(s) 641
TaiI ACGT 2 cut(s) 84, 921
TaqI TCGA 5 cut(s) 7, 219, 338, 870, 1015
TaqII GACCGA 1 cut(s) 957
TasI AATT 6 cut(s) 274, 288, 347, 538, 1040, 1154
TatI WGTACW 1 cut(s) 240
TauI GCSGC 1 cut(s) 788
TfiI GAWTC 8 cut(s) 185, 343, 433, 504, 556, 664, 872, 1054
Tru1I TTAA 1 cut(s) 1044
Tru9I TTAA 1 cut(s) 1044
TscAI CASTG 4 cut(s) 207, 646, 1037, 1147
TseFI GTSAC 3 cut(s) 86, 149, 465
TseI GCWGC 1 cut(s) 306
Tsp45I GTSAC 3 cut(s) 86, 149, 465
TspDTI ATGAA 6 cut(s) 255, 356, 531, 663, 762, 1094
TspGWI ACGGA 3 cut(s) 137, 179, 873
TspRI CASTG 4 cut(s) 207, 646, 1037, 1147
VpaK11BI GGWCC 1 cut(s) 15
XapI RAATTY 2 cut(s) 288, 538
XceI RCATGY 1 cut(s) 1244
XmnI GAANNNNTTC 2 cut(s) 508, 1101
XspI CTAG 7 cut(s) 26, 77, 992, 1094, 1179, 1260, 1264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.