Prupe.1G241200_v2.0.a1

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000146
Physical Location & Seq
Forward (+)
25529269 .. 25531647
2379 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G241200.1

Sequence Viewer

Length: 1374 bp
AATTCCAATCATCACGATTTGATGAATGTCCAGTTGTTGCCAACTAAGCTTGATGGCACCAATTATCTGGCTTGGTCTCATTTTGTAAGATTATATATTACCGGTAAAGGTCGGATTGGATATTTGACTGGAGAGAAGAAGCAACCAGATGATACTGACCCAAAGTTCATAACATGGGTTGAAGAAGATGCTATGCTTAGATCATGGCTTCTCCAGGCTATGACCCCGGATATTAGTCTTGGCTATATGCGTCTCGACTCCGAGCATGCTATATGGGATGCGGTTTCTCAAACCTATTATGAGGGAGGATGTGATGCCCAGATTTATGAATTGAAACGTCGGATCCAAGCCACTACTCAGCAGCGTAAGATGTTGGAGACATATTTTAATTCACTCCAAGCTTTATGGCAAGAACTTGATTATTATCAGCCGTGGGACATGAAGTGTTCTAACGATACCGCTGCGTTGAAAAAACGGATCGAGAAGGAACGTACCTTTGAGTTATTGGCTAGTCTTAATCTGGATTTGGATCAAGTGAGAATACAGGTGCTTGGAAAGGATCCTTTTCCCTCTTTGCGTGAAGCCTATGCATATGTGCGTGCCCAAGCTCTCCACCGATCTACCATGGCACCACTAGTACACCAATCTAGTTATTCAGCTGCTGTCTCATCTGGTAATGTTGCTAAGAGTTCAAAATCTGATGATAAGGATGATTTGAAATGTGATTATTGTCATCAAACTAAGCATGTGAGAGAGCACTGTTTCAAGCTCAATGGTTATCCACCTTGGTGGCCTGGCAAGAAGGGTGAAAAAGCTGAAGGCAGCAAGAGAGGAGGCGGAAAAAGGAGCCGTTCCAGCTTCAAAGCCTATCACACATCTTCTAGTGATCAGAATGACCAACCCACATCTCAACTTTCTTCTGCTCAGATGGAACAAATCGCTCAAGAGTGTGCTCGCTTGCTCTCTGATAAAGGATCTAAAGGGGCTTCCATTTCCTTAGCCACCTCATCAGGTAACTTTGGTTGTTGTCTTAGTGCATATGGTACAGGGGCAACTGATCACATGACTTCTAAACTTGATTTCTTCTCTCGTTATTCATCCCCTAGTAAGACTTGTGTTACCACTGTCGATGTTTCACCCACTCCTGTGCGAAAGTTCGTCATATACGCTTTGCACACATACCAAGCCAAGCAAATAAGCAACATGCCACGCTACAAGCTGAAGTGGGCCCAAGCCACGCAAGATGCCTGGGGCTTGCTTGAGTGGGTTGTGGTATGGATGGATCAACGGATAGGGGCAACGATTGTTCGTGGTAGTGAGAAAGAGGGCCTTTATCTCTTGGATGACCTAGTTGGCTATACTAGTTCCCCCACA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotran_gag_2 Retrotran_gag_3 Retrotrans_gag gag_pre-integrs zf-CCHC

Protein Analysis

458

Amino Acids

51.79

Weight (kDa)

8.53

Isoelectric Point (pI)

36.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000146)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19561 FvH4_1g25371 FvH4_1g25961 FvH4_2g00352 FvH4_2g00861 FvH4_2g04952 FvH4_2g05413 FvH4_2g07531 FvH4_2g08961 FvH4_2g25141 FvH4_2g27292 FvH4_3g18164 FvH4_3g19921 FvH4_3g43870 FvH4_4g14441 FvH4_4g15581 FvH4_4g15582 FvH4_4g16890 FvH4_4g19782 FvH4_4g33444 FvH4_4g33921 FvH4_5g22281 FvH4_5g22282 FvH4_5g32571 FvH4_5g37451 FvH4_5g39631 FvH4_6g04721 FvH4_6g11661 FvH4_6g20571 FvH4_6g32791 FvH4_7g23184
prunus_persica Prupe.1G090900_v2.0.a1 Prupe.1G241200_v2.0.a1 Prupe.1G534100_v2.0.a1 Prupe.3G076700_v2.0.a1 Prupe.4G150800_v2.0.a1 Prupe.4G181800_v2.0.a1 Prupe.4G240900_v2.0.a1 Prupe.4G247600_v2.0.a1 Prupe.6G115900_v2.0.a1 Prupe.6G327500_v2.0.a1 Prupe.8G071700_v2.0.a1
pyrus_communis pycom06g11480 pycom10g08330 pycom15g04320 pycom15g04350 pycom15g12620 pycom2874g00060
rosa_chinensis RchiOBHm_Chr1g0317241 RchiOBHm_Chr1g0341801 RchiOBHm_Chr1g0341931 RchiOBHm_Chr1g0359621 RchiOBHm_Chr2g0113741 RchiOBHm_Chr2g0117261 RchiOBHm_Chr2g0138831 RchiOBHm_Chr2g0141421 RchiOBHm_Chr2g0145281 RchiOBHm_Chr2g0152991 RchiOBHm_Chr3g0448001 RchiOBHm_Chr3g0450981 RchiOBHm_Chr3g0455161 RchiOBHm_Chr3g0457401 RchiOBHm_Chr3g0460001 RchiOBHm_Chr4g0387431 RchiOBHm_Chr4g0388741 RchiOBHm_Chr4g0444201 RchiOBHm_Chr4g0444261 RchiOBHm_Chr5g0010221 RchiOBHm_Chr6g0271721 RchiOBHm_Chr6g0274641 RchiOBHm_Chr6g0294691 RchiOBHm_Chr7g0237031 RchiOBHm_Chr7g0238461 RchiOBHm_Chr7g0239981
rosa_laevigata RLG00000009017
rosa_multiflora Rmu_co7986768.1_g000001 Rmu_co8302239.1_g000001 Rmu_co8485799.1_g000001 Rmu_sc0000061.1_g000013 Rmu_sc0000303.1_g000034 Rmu_sc0000303.1_g000035 Rmu_sc0000315.1_g000017 Rmu_sc0000349.1_g000003 Rmu_sc0000498.1_g000068 Rmu_sc0000508.1_g000014 Rmu_sc0000602.1_g000001 Rmu_sc0000633.1_g000002 Rmu_sc0000638.1_g000030 Rmu_sc0000756.1_g000016 Rmu_sc0000756.1_g000017 Rmu_sc0000785.1_g000037 Rmu_sc0000795.1_g000017 Rmu_sc0000796.1_g000030 Rmu_sc0000863.1_g000023 Rmu_sc0000920.1_g000021 Rmu_sc0000960.1_g000015 Rmu_sc0000982.1_g000102 Rmu_sc0001036.1_g000008 Rmu_sc0001036.1_g000009 Rmu_sc0001643.1_g000029 Rmu_sc0001687.1_g000026 Rmu_sc0001708.1_g000037 Rmu_sc0001768.1_g000015 Rmu_sc0001790.1_g000022 Rmu_sc0002180.1_g000007 Rmu_sc0002211.1_g000006 Rmu_sc0002270.1_g000010 Rmu_sc0002404.1_g000031 Rmu_sc0002858.1_g000016 Rmu_sc0003063.1_g000028 Rmu_sc0003730.1_g000017 Rmu_sc0004087.1_g000020 Rmu_sc0004618.1_g000048 Rmu_sc0004724.1_g000005 Rmu_sc0005167.1_g000036 Rmu_sc0005781.1_g000003 Rmu_sc0005878.1_g000012 Rmu_sc0006011.1_g000003 Rmu_sc0006343.1_g000011 Rmu_sc0006573.1_g000007 Rmu_sc0006599.1_g000007 Rmu_sc0006803.1_g000014 Rmu_sc0006836.1_g000002 Rmu_sc0006849.1_g000002 Rmu_sc0007109.1_g000009 Rmu_sc0009268.1_g000016 Rmu_sc0009618.1_g000017 Rmu_sc0009674.1_g000009 Rmu_sc0010244.1_g000009 Rmu_sc0011151.1_g000004 Rmu_sc0011356.1_g000001 Rmu_sc0011674.1_g000002 Rmu_sc0011778.1_g000016 Rmu_sc0012342.1_g000001 Rmu_sc0012467.1_g000002 Rmu_sc0012574.1_g000003 Rmu_sc0012913.1_g000005 Rmu_sc0013612.1_g000020 Rmu_sc0014824.1_g000001 Rmu_sc0017869.1_g000002 Rmu_sc0018085.1_g000003 Rmu_sc0024789.1_g000001 Rmu_sc0025106.1_g000013 Rmu_sc0034502.1_g000001 Rmu_sc0034547.1_g000001 Rmu_sc0035094.1_g000001 Rmu_sc0035095.1_g000001 Rmu_ssc0000100.1_g000027 Rmu_ssc0000244.1_g000005 Rmu_ssc0000371.1_g000029 Rmu_ssc0000381.1_g000004
rosa_roxburghii Rroxscaffold_1G00015480 Rroxscaffold_1G00023580 Rroxscaffold_1G00039340 Rroxscaffold_1G00047080 Rroxscaffold_2G00095820 Rroxscaffold_2G00125200 Rroxscaffold_2G00128330 Rroxscaffold_3G00270860
rosa_rugosa Rorug06G0120700
rosa_samantha Rh3BG173100 Rh6AG089600 Rh7AG488100 Rh7DG389600
rosa_wichuraiana Rw0G001150 Rw0G001990 Rw0G002010 Rw0G019540 Rw1G013730 Rw1G024110 Rw1G029190 Rw2G018850 Rw2G021090 Rw2G022260 Rw2G023180 Rw2G027280 Rw3G010190 Rw3G020660 Rw3G029380 Rw4G002390 Rw4G002690 Rw4G033260 Rw5G011960 Rw5G023110 Rw5G025250 Rw5G028950 Rw5G033740 Rw5G033950 Rw5G037900 Rw6G009640 Rw6G011620 Rw6G027720 Rw7G010680 Rw7G042070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 56, 628
AciI CCGC 3 cut(s) 281, 459, 837
AclWI GGATC 8 cut(s) 337, 350, 485, 537, 554, 567, 982, 1290
AcuI CTGAAG 2 cut(s) 837, 1241
AfaI GTAC 3 cut(s) 493, 639, 1045
AgeI ACCGGT 1 cut(s) 101
AgsI TTSAA 7 cut(s) 182, 334, 469, 693, 718, 766, 862
AhlI ACTAGT 2 cut(s) 634, 1361
AjnI CCWGG 3 cut(s) 213, 793, 1247
AleI CACNNNNGTG 2 cut(s) 787, 1145
AluBI AGCT 8 cut(s) 49, 401, 608, 659, 769, 815, 858, 1219
AluI AGCT 8 cut(s) 49, 401, 608, 659, 769, 815, 858, 1219
Alw21I GWGCWC 2 cut(s) 759, 955
Alw26I GTCTC 4 cut(s) 81, 257, 371, 670
AlwI GGATC 8 cut(s) 337, 350, 485, 537, 554, 567, 982, 1290
AlwNI CAGNNNCTG 1 cut(s) 662
AoxI GGCC 3 cut(s) 791, 1227, 1327
ApaI GGGCCC 1 cut(s) 1231
ApeKI GCWGC 4 cut(s) 361, 461, 659, 822
AsiGI ACCGGT 1 cut(s) 101
AspS9I GGNCC 3 cut(s) 1227, 1228, 1327
AsuC2I CCSGG 1 cut(s) 227
AsuHPI GGTGA 2 cut(s) 818, 1128
BaeGI GKGCMC 2 cut(s) 604, 1231
BamHI GGATCC 2 cut(s) 342, 559
BanI GGYRCC 2 cut(s) 56, 628
BanII GRGCYC 1 cut(s) 1231
Bbv12I GWGCWC 2 cut(s) 759, 955
BbvI GCAGC 4 cut(s) 373, 448, 646, 834
BccI CCATC 3 cut(s) 47, 922, 1273
BceAI ACGGC 2 cut(s) 415, 834
BcgI CGANNNNNNTGC 2 cut(s) 443, 477
BciT130I CCWGG 3 cut(s) 215, 795, 1249
BclI TGATCA 2 cut(s) 886, 1057
BcnI CCSGG 1 cut(s) 227
BcoDI GTCTC 4 cut(s) 81, 257, 371, 670
BcuI ACTAGT 2 cut(s) 634, 1361
BfaI CTAG 7 cut(s) 510, 635, 648, 882, 1104, 1349, 1362
BisI GCNGC 4 cut(s) 362, 462, 660, 823
BlsI GCNGC 4 cut(s) 363, 463, 661, 824
Bme1390I CCNGG 4 cut(s) 215, 227, 795, 1249
BmgT120I GGNCC 3 cut(s) 1227, 1228, 1327
BmiI GGNNCC 6 cut(s) 58, 344, 561, 630, 848, 1229
BmrFI CCNGG 4 cut(s) 215, 227, 795, 1249
BmsI GCATC 4 cut(s) 178, 268, 304, 1234
BpmI CTGGAG 2 cut(s) 150, 197
Bpu10I CCTNAGC 1 cut(s) 997
BpuEI CTTGAG 2 cut(s) 927, 1280
BpuMI CCSGG 1 cut(s) 227
BsaBI GATNNNNATC 2 cut(s) 423, 528
BsaI GGTCTC 1 cut(s) 81
BsaJI CCNNGG 5 cut(s) 225, 431, 624, 785, 1248
BsaWI WCCGGW 1 cut(s) 101
Bse118I RCCGGY 1 cut(s) 101
Bse1I ACTGG 2 cut(s) 31, 133
Bse8I GATNNNNATC 2 cut(s) 423, 528
BseBI CCWGG 3 cut(s) 215, 795, 1249
BseDI CCNNGG 5 cut(s) 225, 431, 624, 785, 1248
BseGI GGATG 6 cut(s) 283, 314, 715, 1097, 1284, 1348
BseJI GATNNNNATC 2 cut(s) 423, 528
BseMII CTCAG 2 cut(s) 371, 938
BseNI ACTGG 2 cut(s) 31, 133
BseRI GAGGAG 1 cut(s) 846
BseSI GKGCMC 2 cut(s) 604, 1231
BseXI GCAGC 4 cut(s) 373, 448, 646, 834
BshFI GGCC 3 cut(s) 793, 1229, 1329
BshNI GGYRCC 2 cut(s) 56, 628
BshTI ACCGGT 1 cut(s) 101
BsiHKAI GWGCWC 2 cut(s) 759, 955
BsiSI CCGG 2 cut(s) 102, 227
BslFI GGGAC 1 cut(s) 449
BsmAI GTCTC 4 cut(s) 81, 257, 371, 670
BsmBI CGTCTC 1 cut(s) 257
BsmFI GGGAC 1 cut(s) 449
BsnI GGCC 3 cut(s) 793, 1229, 1329
Bso31I GGTCTC 1 cut(s) 81
Bsp120I GGGCCC 1 cut(s) 1227
Bsp1286I GDGCHC 4 cut(s) 604, 759, 955, 1231
Bsp19I CCATGG 1 cut(s) 624
BspACI CCGC 3 cut(s) 281, 459, 837
BspANI GGCC 3 cut(s) 793, 1229, 1329
BspCNI CTCAG 2 cut(s) 370, 937
BspLI GGNNCC 6 cut(s) 58, 344, 561, 630, 848, 1229
BspPI GGATC 8 cut(s) 337, 350, 485, 537, 554, 567, 982, 1290
BspT107I GGYRCC 2 cut(s) 56, 628
BspTNI GGTCTC 1 cut(s) 81
BsrFI RCCGGY 1 cut(s) 101
BsrI ACTGG 2 cut(s) 31, 133
BssAI RCCGGY 1 cut(s) 101
BssECI CCNNGG 5 cut(s) 225, 431, 624, 785, 1248
BssT1I CCWWGG 2 cut(s) 624, 785
Bst2UI CCWGG 3 cut(s) 215, 795, 1249
Bst4CI ACNGT 2 cut(s) 761, 1126
BstC8I GCNNGC 5 cut(s) 267, 600, 955, 959, 1256
BstDEI CTNAG 8 cut(s) 45, 197, 357, 684, 741, 924, 997, 1031
BstDSI CCRYGG 2 cut(s) 431, 624
BstF5I GGATG 6 cut(s) 283, 314, 715, 1097, 1284, 1348
BstMAI GTCTC 4 cut(s) 81, 257, 371, 670
BstMWI GCNNNNNNNGC 2 cut(s) 46, 855
BstNI CCWGG 3 cut(s) 215, 795, 1249
BstNSI RCATGY 3 cut(s) 269, 749, 1207
BstSCI CCNGG 4 cut(s) 213, 225, 793, 1247
BstSLI GKGCMC 2 cut(s) 604, 1231
BstV1I GCAGC 4 cut(s) 373, 448, 646, 834
BstX2I RGATCY 3 cut(s) 342, 559, 974
BstXI CCANNNNNNTGG 2 cut(s) 67, 789
BstYI RGATCY 3 cut(s) 342, 559, 974
BsuRI GGCC 3 cut(s) 793, 1229, 1329
BtgI CCRYGG 2 cut(s) 431, 624
BtsCI GGATG 6 cut(s) 283, 314, 715, 1097, 1284, 1348
BtsIMutI CAGTG 2 cut(s) 757, 1122
Cac8I GCNNGC 5 cut(s) 267, 600, 955, 959, 1256
CaiI CAGNNNCTG 1 cut(s) 662
Cfr10I RCCGGY 1 cut(s) 101
Cfr13I GGNCC 3 cut(s) 1227, 1228, 1327
CseI GACGC 1 cut(s) 239
Csp6I GTAC 3 cut(s) 492, 638, 1044
CspAI ACCGGT 1 cut(s) 101
CviAII CATG 8 cut(s) 174, 204, 266, 439, 625, 746, 1063, 1204
CviQI GTAC 3 cut(s) 492, 638, 1044
DdeI CTNAG 8 cut(s) 45, 197, 357, 684, 741, 924, 997, 1031
EciI GGCGGA 1 cut(s) 852
Eco130I CCWWGG 2 cut(s) 624, 785
Eco24I GRGCYC 1 cut(s) 1231
Eco31I GGTCTC 1 cut(s) 81
Eco57I CTGAAG 2 cut(s) 837, 1241
EcoO109I RGGNCCY 1 cut(s) 1327
EcoRII CCWGG 3 cut(s) 213, 793, 1247
EcoT14I CCWWGG 2 cut(s) 624, 785
EcoT22I ATGCAT 1 cut(s) 592
EcoT38I GRGCYC 1 cut(s) 1231
ErhI CCWWGG 2 cut(s) 624, 785
Esp3I CGTCTC 1 cut(s) 257
FaeI CATG 8 cut(s) 177, 207, 269, 442, 628, 749, 1066, 1207
FalI AAGNNNNNCTT 2 cut(s) 1314, 1346
FaqI GGGAC 1 cut(s) 449
FatI CATG 8 cut(s) 173, 203, 265, 438, 624, 745, 1062, 1203
FauNDI CATATG 2 cut(s) 592, 1039
FbaI TGATCA 2 cut(s) 886, 1057
Fnu4HI GCNGC 4 cut(s) 362, 462, 660, 823
FokI GGATG 6 cut(s) 290, 321, 722, 1084, 1291, 1355
FriOI GRGCYC 1 cut(s) 1231
Fsp4HI GCNGC 4 cut(s) 362, 462, 660, 823
FspBI CTAG 7 cut(s) 510, 635, 648, 882, 1104, 1349, 1362
GluI GCNGC 4 cut(s) 362, 462, 660, 823
GsuI CTGGAG 2 cut(s) 150, 197
HaeIII GGCC 3 cut(s) 793, 1229, 1329
HapII CCGG 2 cut(s) 102, 227
HgaI GACGC 1 cut(s) 239
Hin1II CATG 8 cut(s) 177, 207, 269, 442, 628, 749, 1066, 1207
HindIII AAGCTT 2 cut(s) 47, 399
HinfI GANTC 1 cut(s) 257
HpaII CCGG 2 cut(s) 102, 227
HphI GGTGA 2 cut(s) 818, 1128
Hpy166II GTNNAC 1 cut(s) 640
Hpy188I TCNGA 7 cut(s) 114, 262, 342, 700, 891, 927, 967
Hpy188III TCNNGA 5 cut(s) 14, 254, 481, 521, 944
Hpy8I GTNNAC 1 cut(s) 640
Hpy99I CGWCG 1 cut(s) 342
HpyAV CCTTC 3 cut(s) 478, 796, 812
HpyCH4III ACNGT 2 cut(s) 761, 1126
HpyCH4IV ACGT 2 cut(s) 337, 490
HpyCH4V TGCA 3 cut(s) 590, 1037, 1174
HpyF10VI GCNNNNNNNGC 2 cut(s) 46, 855
HpyF3I CTNAG 8 cut(s) 45, 197, 357, 684, 741, 924, 997, 1031
HpySE526I ACGT 2 cut(s) 337, 490
Hsp92II CATG 8 cut(s) 177, 207, 269, 442, 628, 749, 1066, 1207
Ksp22I TGATCA 2 cut(s) 886, 1057
LmnI GCTCC 1 cut(s) 846
Lsp1109I GCAGC 4 cut(s) 373, 448, 646, 834
LweI GCATC 4 cut(s) 178, 268, 304, 1234
MaeI CTAG 7 cut(s) 510, 635, 648, 882, 1104, 1349, 1362
MaeII ACGT 2 cut(s) 337, 490
MaeIII GTNAC 2 cut(s) 1013, 1117
MboII GAAGA 6 cut(s) 148, 194, 197, 870, 909, 1075
MflI RGATCY 3 cut(s) 342, 559, 974
MhlI GDGCHC 4 cut(s) 604, 759, 955, 1231
MluCI AATT 3 cut(s) 61, 329, 388
MlyI GAGTC 1 cut(s) 251
MmeI TCCRAC 3 cut(s) 92, 320, 354
MnlI CCTC 7 cut(s) 295, 299, 580, 824, 827, 1015, 1318
Mph1103I ATGCAT 1 cut(s) 592
MseI TTAA 2 cut(s) 387, 516
MslI CAYNNNNRTG 2 cut(s) 787, 1145
MspA1I CMGCKG 2 cut(s) 461, 659
MspI CCGG 2 cut(s) 102, 227
MspR9I CCNGG 4 cut(s) 215, 227, 795, 1249
MvaI CCWGG 3 cut(s) 215, 795, 1249
MwoI GCNNNNNNNGC 2 cut(s) 46, 855
NciI CCSGG 1 cut(s) 227
NcoI CCATGG 1 cut(s) 624
NdeI CATATG 2 cut(s) 592, 1039
NlaIII CATG 8 cut(s) 177, 207, 269, 442, 628, 749, 1066, 1207
NlaIV GGNNCC 6 cut(s) 58, 344, 561, 630, 848, 1229
NsiI ATGCAT 1 cut(s) 592
NspI RCATGY 3 cut(s) 269, 749, 1207
OliI CACNNNNGTG 2 cut(s) 787, 1145
PaeI GCATGC 1 cut(s) 269
PinAI ACCGGT 1 cut(s) 101
PkrI GCNGC 4 cut(s) 363, 463, 661, 824
PleI GAGTC 1 cut(s) 251
PpsI GAGTC 1 cut(s) 251
Psp6I CCWGG 3 cut(s) 213, 793, 1247
PspGI CCWGG 3 cut(s) 213, 793, 1247
PspN4I GGNNCC 6 cut(s) 58, 344, 561, 630, 848, 1229
PspOMI GGGCCC 1 cut(s) 1227
PspPI GGNCC 3 cut(s) 1227, 1228, 1327
PstNI CAGNNNCTG 1 cut(s) 662
PsuI RGATCY 3 cut(s) 342, 559, 974
PvuII CAGCTG 1 cut(s) 659
RsaI GTAC 3 cut(s) 493, 639, 1045
RsaNI GTAC 3 cut(s) 492, 638, 1044
RseI CAYNNNNRTG 2 cut(s) 787, 1145
SaqAI TTAA 2 cut(s) 387, 516
SatI GCNGC 4 cut(s) 362, 462, 660, 823
Sau96I GGNCC 3 cut(s) 1227, 1228, 1327
SchI GAGTC 1 cut(s) 251
ScrFI CCNGG 4 cut(s) 215, 227, 795, 1249
SduI GDGCHC 4 cut(s) 604, 759, 955, 1231
SfaNI GCATC 4 cut(s) 178, 268, 304, 1234
SmiMI CAYNNNNRTG 2 cut(s) 787, 1145
SmlI CTYRAG 2 cut(s) 942, 1259
SmoI CTYRAG 2 cut(s) 942, 1259
SpeI ACTAGT 2 cut(s) 634, 1361
SphI GCATGC 1 cut(s) 269
Sse9I AATT 3 cut(s) 61, 329, 388
SsiI CCGC 3 cut(s) 281, 459, 837
SspMI CTAG 7 cut(s) 510, 635, 648, 882, 1104, 1349, 1362
StyD4I CCNGG 4 cut(s) 213, 225, 793, 1247
StyI CCWWGG 2 cut(s) 624, 785
TaaI ACNGT 2 cut(s) 761, 1126
TaiI ACGT 2 cut(s) 340, 493
TaqI TCGA 3 cut(s) 255, 480, 1128
TasI AATT 3 cut(s) 61, 329, 388
TatI WGTACW 1 cut(s) 637
Tru1I TTAA 2 cut(s) 387, 516
Tru9I TTAA 2 cut(s) 387, 516
TscAI CASTG 2 cut(s) 764, 1129
TseI GCWGC 4 cut(s) 361, 461, 659, 822
TspDTI ATGAA 5 cut(s) 38, 157, 342, 455, 1086
TspGWI ACGGA 2 cut(s) 490, 1303
TspRI CASTG 2 cut(s) 764, 1129
XceI RCATGY 3 cut(s) 269, 749, 1207
XspI CTAG 7 cut(s) 510, 635, 648, 882, 1104, 1349, 1362
Zsp2I ATGCAT 1 cut(s) 592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.