transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 352 |
| AclWI | GGATC | 1 cut(s) | 263 |
| AcsI | RAATTY | 3 cut(s) | 36, 201, 432 |
| AcuI | CTGAAG | 1 cut(s) | 315 |
| AfaI | GTAC | 1 cut(s) | 106 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 40 |
| AflIII | ACRYGT | 1 cut(s) | 51 |
| AgsI | TTSAA | 2 cut(s) | 145, 200 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 298, 330 |
| AluBI | AGCT | 2 cut(s) | 141, 337 |
| AluI | AGCT | 2 cut(s) | 141, 337 |
| Alw26I | GTCTC | 1 cut(s) | 23 |
| AlwI | GGATC | 1 cut(s) | 263 |
| AoxI | GGCC | 1 cut(s) | 252 |
| ApeKI | GCWGC | 1 cut(s) | 63 |
| ApoI | RAATTY | 3 cut(s) | 36, 201, 432 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 436 |
| AspS9I | GGNCC | 1 cut(s) | 243 |
| AsuHPI | GGTGA | 1 cut(s) | 55 |
| AvaII | GGWCC | 1 cut(s) | 243 |
| BanII | GRGCYC | 1 cut(s) | 190 |
| BbvI | GCAGC | 1 cut(s) | 50 |
| BcoDI | GTCTC | 1 cut(s) | 23 |
| BfaI | CTAG | 1 cut(s) | 429 |
| BisI | GCNGC | 1 cut(s) | 64 |
| BlsI | GCNGC | 1 cut(s) | 65 |
| Bme18I | GGWCC | 1 cut(s) | 243 |
| BmgT120I | GGNCC | 1 cut(s) | 243 |
| BmiI | GGNNCC | 2 cut(s) | 189, 244 |
| BmsI | GCATC | 1 cut(s) | 379 |
| BpmI | CTGGAG | 1 cut(s) | 359 |
| BpuEI | CTTGAG | 1 cut(s) | 121 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 40 |
| Bse3DI | GCAATG | 1 cut(s) | 336 |
| BseGI | GGATG | 4 cut(s) | 159, 169, 271, 394 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 40 |
| BseMI | GCAATG | 1 cut(s) | 336 |
| BseRI | GAGGAG | 1 cut(s) | 180 |
| BseXI | GCAGC | 1 cut(s) | 50 |
| BshFI | GGCC | 1 cut(s) | 254 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 40 |
| BsmAI | GTCTC | 1 cut(s) | 23 |
| BsnI | GGCC | 1 cut(s) | 254 |
| Bsp1286I | GDGCHC | 1 cut(s) | 190 |
| Bsp143I | GATC | 5 cut(s) | 114, 268, 298, 342, 445 |
| BspANI | GGCC | 1 cut(s) | 254 |
| BspHI | TCATGA | 2 cut(s) | 117, 345 |
| BspLI | GGNNCC | 2 cut(s) | 189, 244 |
| BspPI | GGATC | 1 cut(s) | 263 |
| BsrDI | GCAATG | 1 cut(s) | 336 |
| BssMI | GATC | 5 cut(s) | 114, 268, 298, 342, 445 |
| BstF5I | GGATG | 4 cut(s) | 159, 169, 271, 394 |
| BstKTI | GATC | 5 cut(s) | 117, 271, 301, 345, 448 |
| BstMAI | GTCTC | 1 cut(s) | 23 |
| BstMBI | GATC | 5 cut(s) | 114, 268, 298, 342, 445 |
| BstNSI | RCATGY | 1 cut(s) | 55 |
| BstV1I | GCAGC | 1 cut(s) | 50 |
| BsuRI | GGCC | 1 cut(s) | 254 |
| BtsCI | GGATG | 4 cut(s) | 159, 169, 271, 394 |
| CciI | TCATGA | 2 cut(s) | 117, 345 |
| Cfr13I | GGNCC | 1 cut(s) | 243 |
| Csp6I | GTAC | 1 cut(s) | 105 |
| CviAII | CATG | 3 cut(s) | 52, 118, 346 |
| CviJI | RGCY | 7 cut(s) | 127, 141, 188, 254, 319, 337, 428 |
| CviKI_1 | RGCY | 7 cut(s) | 127, 141, 188, 254, 319, 337, 428 |
| CviQI | GTAC | 1 cut(s) | 105 |
| DpnI | GATC | 5 cut(s) | 116, 270, 300, 344, 447 |
| DpnII | GATC | 5 cut(s) | 114, 268, 298, 342, 445 |
| Eco147I | AGGCCT | 1 cut(s) | 254 |
| Eco24I | GRGCYC | 1 cut(s) | 190 |
| Eco32I | GATATC | 1 cut(s) | 233 |
| Eco47I | GGWCC | 1 cut(s) | 243 |
| Eco57I | CTGAAG | 1 cut(s) | 315 |
| EcoRI | GAATTC | 1 cut(s) | 36 |
| EcoRV | GATATC | 1 cut(s) | 233 |
| EcoT38I | GRGCYC | 1 cut(s) | 190 |
| FaeI | CATG | 3 cut(s) | 55, 121, 349 |
| FaiI | YATR | 8 cut(s) | 53, 119, 177, 184, 207, 279, 347, 357 |
| FatI | CATG | 3 cut(s) | 51, 117, 345 |
| Fnu4HI | GCNGC | 1 cut(s) | 64 |
| FokI | GGATG | 4 cut(s) | 166, 176, 278, 401 |
| FriOI | GRGCYC | 1 cut(s) | 190 |
| Fsp4HI | GCNGC | 1 cut(s) | 64 |
| FspBI | CTAG | 1 cut(s) | 429 |
| GluI | GCNGC | 1 cut(s) | 64 |
| GsuI | CTGGAG | 1 cut(s) | 359 |
| HaeIII | GGCC | 1 cut(s) | 254 |
| Hin1II | CATG | 3 cut(s) | 55, 121, 349 |
| HindIII | AAGCTT | 1 cut(s) | 139 |
| HinfI | GANTC | 1 cut(s) | 121 |
| HphI | GGTGA | 1 cut(s) | 55 |
| Hpy188I | TCNGA | 4 cut(s) | 114, 295, 303, 450 |
| Hpy188III | TCNNGA | 3 cut(s) | 82, 118, 346 |
| HpyCH4IV | ACGT | 1 cut(s) | 352 |
| HpySE526I | ACGT | 1 cut(s) | 352 |
| Hsp92II | CATG | 3 cut(s) | 55, 121, 349 |
| Kzo9I | GATC | 5 cut(s) | 114, 268, 298, 342, 445 |
| LmnI | GCTCC | 2 cut(s) | 115, 193 |
| LpnPI | CCDG | 3 cut(s) | 26, 87, 323 |
| Lsp1109I | GCAGC | 1 cut(s) | 50 |
| LweI | GCATC | 1 cut(s) | 379 |
| MaeI | CTAG | 1 cut(s) | 429 |
| MaeII | ACGT | 1 cut(s) | 352 |
| MaeIII | GTNAC | 1 cut(s) | 367 |
| MalI | GATC | 5 cut(s) | 116, 270, 300, 344, 447 |
| MboI | GATC | 5 cut(s) | 114, 268, 298, 342, 445 |
| MboII | GAAGA | 4 cut(s) | 227, 232, 235, 308 |
| MhlI | GDGCHC | 1 cut(s) | 190 |
| MluCI | AATT | 5 cut(s) | 36, 201, 306, 432, 454 |
| MnlI | CCTC | 2 cut(s) | 201, 418 |
| MroXI | GAANNNNTTC | 1 cut(s) | 436 |
| MseI | TTAA | 3 cut(s) | 249, 309, 396 |
| MslI | CAYNNNNRTG | 1 cut(s) | 152 |
| NdeII | GATC | 5 cut(s) | 114, 268, 298, 342, 445 |
| NlaIII | CATG | 3 cut(s) | 55, 121, 349 |
| NlaIV | GGNNCC | 2 cut(s) | 189, 244 |
| NspI | RCATGY | 1 cut(s) | 55 |
| PagI | TCATGA | 2 cut(s) | 117, 345 |
| PceI | AGGCCT | 1 cut(s) | 254 |
| PciI | ACATGT | 1 cut(s) | 51 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 358 |
| PdmI | GAANNNNTTC | 1 cut(s) | 436 |
| PfeI | GAWTC | 1 cut(s) | 121 |
| PkrI | GCNGC | 1 cut(s) | 65 |
| PscI | ACATGT | 1 cut(s) | 51 |
| Psp1406I | AACGTT | 1 cut(s) | 352 |
| PspN4I | GGNNCC | 2 cut(s) | 189, 244 |
| PspPI | GGNCC | 1 cut(s) | 243 |
| RsaI | GTAC | 1 cut(s) | 106 |
| RsaNI | GTAC | 1 cut(s) | 105 |
| RseI | CAYNNNNRTG | 1 cut(s) | 152 |
| SaqAI | TTAA | 3 cut(s) | 249, 309, 396 |
| SatI | GCNGC | 1 cut(s) | 64 |
| Sau3AI | GATC | 5 cut(s) | 114, 268, 298, 342, 445 |
| Sau96I | GGNCC | 1 cut(s) | 243 |
| SduI | GDGCHC | 1 cut(s) | 190 |
| SetI | ASST | 3 cut(s) | 143, 339, 355 |
| SfaNI | GCATC | 1 cut(s) | 379 |
| SinI | GGWCC | 1 cut(s) | 243 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 152 |
| SmlI | CTYRAG | 1 cut(s) | 136 |
| SmoI | CTYRAG | 1 cut(s) | 136 |
| Sse9I | AATT | 5 cut(s) | 36, 201, 306, 432, 454 |
| SseBI | AGGCCT | 1 cut(s) | 254 |
| SspMI | CTAG | 1 cut(s) | 429 |
| StuI | AGGCCT | 1 cut(s) | 254 |
| TaiI | ACGT | 1 cut(s) | 355 |
| TaqI | TCGA | 2 cut(s) | 81, 361 |
| TasI | AATT | 5 cut(s) | 36, 201, 306, 432, 454 |
| TfiI | GAWTC | 1 cut(s) | 121 |
| Tru1I | TTAA | 3 cut(s) | 249, 309, 396 |
| Tru9I | TTAA | 3 cut(s) | 249, 309, 396 |
| TseI | GCWGC | 1 cut(s) | 63 |
| TspDTI | ATGAA | 5 cut(s) | 17, 194, 347, 362, 429 |
| VpaK11BI | GGWCC | 1 cut(s) | 243 |
| XapI | RAATTY | 3 cut(s) | 36, 201, 432 |
| XceI | RCATGY | 1 cut(s) | 55 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 98 |
| XmnI | GAANNNNTTC | 1 cut(s) | 436 |
| XspI | CTAG | 1 cut(s) | 429 |