Cysteine-rich RLK (RECEPTOR-like protein kinase) 8
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotran_gag_2 | PF14223 | 12 - 112 | 3.5e-08 | gag-polypeptide of LTR copia-type |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 931 |
| Acc65I | GGTACC | 1 cut(s) | 384 |
| AccB1I | GGYRCC | 1 cut(s) | 384 |
| AccI | GTMKAC | 1 cut(s) | 215 |
| AccII | CGCG | 1 cut(s) | 997 |
| AciI | CCGC | 4 cut(s) | 517, 737, 995, 1000 |
| AclWI | GGATC | 4 cut(s) | 118, 216, 904, 964 |
| AcsI | RAATTY | 1 cut(s) | 1013 |
| AcuI | CTGAAG | 1 cut(s) | 165 |
| AfaI | GTAC | 1 cut(s) | 386 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 653 |
| AgsI | TTSAA | 5 cut(s) | 133, 407, 563, 584, 794 |
| AjnI | CCWGG | 3 cut(s) | 652, 906, 980 |
| AluBI | AGCT | 8 cut(s) | 59, 137, 263, 296, 313, 503, 785, 878 |
| AluI | AGCT | 8 cut(s) | 59, 137, 263, 296, 313, 503, 785, 878 |
| Alw21I | GWGCWC | 1 cut(s) | 989 |
| Alw26I | GTCTC | 2 cut(s) | 170, 710 |
| AlwI | GGATC | 4 cut(s) | 118, 216, 904, 964 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 296, 788 |
| ApeKI | GCWGC | 3 cut(s) | 263, 782, 785 |
| ApoI | RAATTY | 1 cut(s) | 1013 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 411 |
| Asp718I | GGTACC | 1 cut(s) | 384 |
| AspLEI | GCGC | 2 cut(s) | 686, 999 |
| AspS9I | GGNCC | 3 cut(s) | 625, 644, 799 |
| AsuHPI | GGTGA | 3 cut(s) | 298, 585, 896 |
| AsuII | TTCGAA | 1 cut(s) | 1011 |
| AvaII | GGWCC | 3 cut(s) | 625, 644, 799 |
| AxyI | CCTNAGG | 1 cut(s) | 771 |
| BanI | GGYRCC | 1 cut(s) | 384 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 138, 170 |
| Bbv12I | GWGCWC | 1 cut(s) | 989 |
| BbvI | GCAGC | 3 cut(s) | 250, 772, 794 |
| BccI | CCATC | 4 cut(s) | 25, 101, 112, 958 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 702, 736 |
| BciT130I | CCWGG | 3 cut(s) | 654, 908, 982 |
| BciVI | GTATCC | 1 cut(s) | 15 |
| BclI | TGATCA | 1 cut(s) | 337 |
| BcoDI | GTCTC | 2 cut(s) | 170, 710 |
| BfaI | CTAG | 5 cut(s) | 267, 489, 570, 575, 809 |
| BfmI | CTRYAG | 3 cut(s) | 155, 864, 873 |
| BfuAI | ACCTGC | 1 cut(s) | 931 |
| BfuI | GTATCC | 1 cut(s) | 15 |
| BglII | AGATCT | 1 cut(s) | 373 |
| BisI | GCNGC | 4 cut(s) | 264, 783, 786, 1000 |
| BlsI | GCNGC | 4 cut(s) | 265, 784, 787, 1001 |
| Bme1390I | CCNGG | 3 cut(s) | 654, 908, 982 |
| Bme18I | GGWCC | 3 cut(s) | 625, 644, 799 |
| BmgT120I | GGNCC | 3 cut(s) | 625, 644, 799 |
| BmiI | GGNNCC | 2 cut(s) | 386, 627 |
| BmrFI | CCNGG | 3 cut(s) | 654, 908, 982 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 453, 485 |
| Bpu14I | TTCGAA | 1 cut(s) | 1011 |
| BpuEI | CTTGAG | 1 cut(s) | 445 |
| BsaBI | GATNNNNATC | 1 cut(s) | 122 |
| BsaJI | CCNNGG | 2 cut(s) | 16, 907 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 469, 499, 591, 621 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 653 |
| Bse1I | ACTGG | 2 cut(s) | 49, 290 |
| Bse21I | CCTNAGG | 1 cut(s) | 771 |
| Bse3DI | GCAATG | 2 cut(s) | 457, 700 |
| Bse8I | GATNNNNATC | 1 cut(s) | 122 |
| BseBI | CCWGG | 3 cut(s) | 654, 908, 982 |
| BseDI | CCNNGG | 2 cut(s) | 16, 907 |
| BseGI | GGATG | 5 cut(s) | 79, 106, 513, 529, 766 |
| BseJI | GATNNNNATC | 1 cut(s) | 122 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 653 |
| BseMI | GCAATG | 2 cut(s) | 457, 700 |
| BseMII | CTCAG | 2 cut(s) | 484, 924 |
| BseNI | ACTGG | 2 cut(s) | 49, 290 |
| BseRI | GAGGAG | 1 cut(s) | 83 |
| BseXI | GCAGC | 3 cut(s) | 250, 772, 794 |
| Bsh1236I | CGCG | 1 cut(s) | 997 |
| BshNI | GGYRCC | 1 cut(s) | 384 |
| BsiHKAI | GWGCWC | 1 cut(s) | 989 |
| BslFI | GGGAC | 2 cut(s) | 611, 977 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 653 |
| BsmAI | GTCTC | 2 cut(s) | 170, 710 |
| BsmFI | GGGAC | 2 cut(s) | 611, 977 |
| Bsp119I | TTCGAA | 1 cut(s) | 1011 |
| Bsp1286I | GDGCHC | 1 cut(s) | 989 |
| BspACI | CCGC | 4 cut(s) | 517, 737, 995, 1000 |
| BspCNI | CTCAG | 2 cut(s) | 483, 925 |
| BspFNI | CGCG | 1 cut(s) | 997 |
| BspHI | TCATGA | 1 cut(s) | 244 |
| BspLI | GGNNCC | 2 cut(s) | 386, 627 |
| BspMI | ACCTGC | 1 cut(s) | 931 |
| BspPI | GGATC | 4 cut(s) | 118, 216, 904, 964 |
| BspT104I | TTCGAA | 1 cut(s) | 1011 |
| BspT107I | GGYRCC | 1 cut(s) | 384 |
| BsrDI | GCAATG | 2 cut(s) | 457, 700 |
| BsrI | ACTGG | 2 cut(s) | 49, 290 |
| BssECI | CCNNGG | 2 cut(s) | 16, 907 |
| BssNAI | GTATAC | 1 cut(s) | 216 |
| Bst1107I | GTATAC | 1 cut(s) | 216 |
| Bst2UI | CCWGG | 3 cut(s) | 654, 908, 982 |
| Bst4CI | ACNGT | 3 cut(s) | 159, 542, 991 |
| BstBI | TTCGAA | 1 cut(s) | 1011 |
| BstDEI | CTNAG | 5 cut(s) | 62, 90, 470, 771, 933 |
| BstDSI | CCRYGG | 1 cut(s) | 16 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 651 |
| BstF5I | GGATG | 5 cut(s) | 79, 106, 513, 529, 766 |
| BstFNI | CGCG | 1 cut(s) | 997 |
| BstHHI | GCGC | 2 cut(s) | 686, 999 |
| BstMAI | GTCTC | 2 cut(s) | 170, 710 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 584, 690, 782, 854, 875 |
| BstNI | CCWGG | 3 cut(s) | 654, 908, 982 |
| BstNSI | RCATGY | 3 cut(s) | 41, 554, 710 |
| BstSCI | CCNGG | 3 cut(s) | 652, 906, 980 |
| BstSFI | CTRYAG | 3 cut(s) | 155, 864, 873 |
| BstUI | CGCG | 1 cut(s) | 997 |
| BstV1I | GCAGC | 3 cut(s) | 250, 772, 794 |
| BstX2I | RGATCY | 4 cut(s) | 110, 208, 373, 896 |
| BstYI | RGATCY | 4 cut(s) | 110, 208, 373, 896 |
| BstZ17I | GTATAC | 1 cut(s) | 216 |
| Bsu36I | CCTNAGG | 1 cut(s) | 771 |
| BsuI | GTATCC | 1 cut(s) | 15 |
| BtgI | CCRYGG | 1 cut(s) | 16 |
| BtsCI | GGATG | 5 cut(s) | 79, 106, 513, 529, 766 |
| BveI | ACCTGC | 1 cut(s) | 931 |
| CaiI | CAGNNNCTG | 2 cut(s) | 296, 788 |
| CciI | TCATGA | 1 cut(s) | 244 |
| CfoI | GCGC | 2 cut(s) | 686, 999 |
| Cfr13I | GGNCC | 3 cut(s) | 625, 644, 799 |
| CseI | GACGC | 1 cut(s) | 335 |
| Csp6I | GTAC | 1 cut(s) | 385 |
| CviAII | CATG | 5 cut(s) | 38, 245, 416, 551, 707 |
| CviQI | GTAC | 1 cut(s) | 385 |
| DdeI | CTNAG | 5 cut(s) | 62, 90, 470, 771, 933 |
| Eco47I | GGWCC | 3 cut(s) | 625, 644, 799 |
| Eco57I | CTGAAG | 1 cut(s) | 165 |
| Eco81I | CCTNAGG | 1 cut(s) | 771 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 651 |
| EcoO109I | RGGNCCY | 1 cut(s) | 644 |
| EcoRI | GAATTC | 1 cut(s) | 1013 |
| EcoRII | CCWGG | 3 cut(s) | 652, 906, 980 |
| FaeI | CATG | 5 cut(s) | 41, 248, 419, 554, 710 |
| FaqI | GGGAC | 2 cut(s) | 611, 977 |
| FatI | CATG | 5 cut(s) | 37, 244, 415, 550, 706 |
| FauI | CCCGC | 2 cut(s) | 744, 1002 |
| FbaI | TGATCA | 1 cut(s) | 337 |
| FblI | GTMKAC | 1 cut(s) | 215 |
| Fnu4HI | GCNGC | 4 cut(s) | 264, 783, 786, 1000 |
| FokI | GGATG | 5 cut(s) | 86, 113, 500, 536, 753 |
| Fsp4HI | GCNGC | 4 cut(s) | 264, 783, 786, 1000 |
| FspBI | CTAG | 5 cut(s) | 267, 489, 570, 575, 809 |
| GlaI | GCGC | 2 cut(s) | 685, 998 |
| GluI | GCNGC | 4 cut(s) | 264, 783, 786, 1000 |
| HgaI | GACGC | 1 cut(s) | 335 |
| HhaI | GCGC | 2 cut(s) | 686, 999 |
| Hin1II | CATG | 5 cut(s) | 41, 248, 419, 554, 710 |
| Hin6I | GCGC | 2 cut(s) | 684, 997 |
| HinP1I | GCGC | 2 cut(s) | 684, 997 |
| HinfI | GANTC | 3 cut(s) | 224, 364, 527 |
| HphI | GGTGA | 3 cut(s) | 298, 585, 896 |
| Hpy166II | GTNNAC | 2 cut(s) | 216, 677 |
| Hpy188I | TCNGA | 5 cut(s) | 229, 473, 934, 961, 1019 |
| Hpy188III | TCNNGA | 6 cut(s) | 245, 361, 368, 424, 713, 954 |
| Hpy8I | GTNNAC | 2 cut(s) | 216, 677 |
| HpyAV | CCTTC | 2 cut(s) | 161, 385 |
| HpyCH4III | ACNGT | 3 cut(s) | 159, 542, 991 |
| HpyCH4V | TGCA | 5 cut(s) | 258, 274, 354, 554, 693 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 584, 690, 782, 854, 875 |
| HpyF3I | CTNAG | 5 cut(s) | 62, 90, 470, 771, 933 |
| Hsp92II | CATG | 5 cut(s) | 41, 248, 419, 554, 710 |
| HspAI | GCGC | 2 cut(s) | 684, 997 |
| KpnI | GGTACC | 1 cut(s) | 388 |
| Ksp22I | TGATCA | 1 cut(s) | 337 |
| LmnI | GCTCC | 1 cut(s) | 984 |
| Lsp1109I | GCAGC | 3 cut(s) | 250, 772, 794 |
| MaeI | CTAG | 5 cut(s) | 267, 489, 570, 575, 809 |
| MaeIII | GTNAC | 1 cut(s) | 40 |
| MboII | GAAGA | 3 cut(s) | 158, 383, 891 |
| MfeI | CAATTG | 1 cut(s) | 794 |
| MflI | RGATCY | 4 cut(s) | 110, 208, 373, 896 |
| MhlI | GDGCHC | 1 cut(s) | 989 |
| MluCI | AATT | 6 cut(s) | 248, 333, 464, 794, 916, 1013 |
| MlyI | GAGTC | 1 cut(s) | 233 |
| MmeI | TCCRAC | 1 cut(s) | 634 |
| MnlI | CCTC | 9 cut(s) | 61, 64, 91, 422, 495, 657, 752, 880, 928 |
| MroXI | GAANNNNTTC | 1 cut(s) | 411 |
| MseI | TTAA | 1 cut(s) | 915 |
| MslI | CAYNNNNRTG | 1 cut(s) | 450 |
| MspA1I | CMGCKG | 1 cut(s) | 785 |
| MspR9I | CCNGG | 3 cut(s) | 654, 908, 982 |
| MunI | CAATTG | 1 cut(s) | 794 |
| MvaI | CCWGG | 3 cut(s) | 654, 908, 982 |
| MvnI | CGCG | 1 cut(s) | 997 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 584, 690, 782, 854, 875 |
| NlaIII | CATG | 5 cut(s) | 41, 248, 419, 554, 710 |
| NlaIV | GGNNCC | 2 cut(s) | 386, 627 |
| NmuCI | GTSAC | 1 cut(s) | 40 |
| NspI | RCATGY | 3 cut(s) | 41, 554, 710 |
| NspV | TTCGAA | 1 cut(s) | 1011 |
| PagI | TCATGA | 1 cut(s) | 244 |
| PdmI | GAANNNNTTC | 1 cut(s) | 411 |
| PfeI | GAWTC | 2 cut(s) | 364, 527 |
| PkrI | GCNGC | 4 cut(s) | 265, 784, 787, 1001 |
| PleI | GAGTC | 1 cut(s) | 232 |
| PpsI | GAGTC | 1 cut(s) | 232 |
| PpuMI | RGGWCCY | 1 cut(s) | 644 |
| Psp5II | RGGWCCY | 1 cut(s) | 644 |
| Psp6I | CCWGG | 3 cut(s) | 652, 906, 980 |
| PspGI | CCWGG | 3 cut(s) | 652, 906, 980 |
| PspN4I | GGNNCC | 2 cut(s) | 386, 627 |
| PspPI | GGNCC | 3 cut(s) | 625, 644, 799 |
| PspPPI | RGGWCCY | 1 cut(s) | 644 |
| PstNI | CAGNNNCTG | 2 cut(s) | 296, 788 |
| PsuI | RGATCY | 4 cut(s) | 110, 208, 373, 896 |
| PvuII | CAGCTG | 1 cut(s) | 785 |
| RsaI | GTAC | 1 cut(s) | 386 |
| RsaNI | GTAC | 1 cut(s) | 385 |
| RseI | CAYNNNNRTG | 1 cut(s) | 450 |
| SaqAI | TTAA | 1 cut(s) | 915 |
| SatI | GCNGC | 4 cut(s) | 264, 783, 786, 1000 |
| Sau96I | GGNCC | 3 cut(s) | 625, 644, 799 |
| SchI | GAGTC | 1 cut(s) | 233 |
| ScrFI | CCNGG | 3 cut(s) | 654, 908, 982 |
| SduI | GDGCHC | 1 cut(s) | 989 |
| SfcI | CTRYAG | 3 cut(s) | 155, 864, 873 |
| SfuI | TTCGAA | 1 cut(s) | 1011 |
| SinI | GGWCC | 3 cut(s) | 625, 644, 799 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 450 |
| SmlI | CTYRAG | 1 cut(s) | 424 |
| SmoI | CTYRAG | 1 cut(s) | 424 |
| Sse9I | AATT | 6 cut(s) | 248, 333, 464, 794, 916, 1013 |
| SsiI | CCGC | 4 cut(s) | 517, 737, 995, 1000 |
| SspMI | CTAG | 5 cut(s) | 267, 489, 570, 575, 809 |
| StyD4I | CCNGG | 3 cut(s) | 652, 906, 980 |
| TaaI | ACNGT | 3 cut(s) | 159, 542, 991 |
| TaqI | TCGA | 2 cut(s) | 712, 1011 |
| TaqII | GACCGA | 1 cut(s) | 613 |
| TasI | AATT | 6 cut(s) | 248, 333, 464, 794, 916, 1013 |
| TauI | GCSGC | 1 cut(s) | 1002 |
| TfiI | GAWTC | 2 cut(s) | 364, 527 |
| Tru1I | TTAA | 1 cut(s) | 915 |
| Tru9I | TTAA | 1 cut(s) | 915 |
| TseFI | GTSAC | 1 cut(s) | 40 |
| TseI | GCWGC | 3 cut(s) | 263, 782, 785 |
| Tsp45I | GTSAC | 1 cut(s) | 40 |
| TspDTI | ATGAA | 4 cut(s) | 233, 261, 404, 540 |
| TspGWI | ACGGA | 2 cut(s) | 5, 197 |
| VpaK11BI | GGWCC | 3 cut(s) | 625, 644, 799 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 651 |
| XapI | RAATTY | 1 cut(s) | 1013 |
| XceI | RCATGY | 3 cut(s) | 41, 554, 710 |
| XmiI | GTMKAC | 1 cut(s) | 215 |
| XmnI | GAANNNNTTC | 1 cut(s) | 411 |
| XspI | CTAG | 5 cut(s) | 267, 489, 570, 575, 809 |