Rmu_sc0035095.1_g000001
RLK Family

cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0035095.1
Physical Location & Seq
Forward (+)
1 .. 586
586 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0035095.1_g000001.1.cds

Sequence Viewer

Length: 490 bp
aatatatgggctgaaattgatcagaagcgtccttgcaagatcaagaatcaggaagatcttctgtggtaccagaaggagaagaagctagaaagggttcttgtattcctgagagggcttgatgagaagcataacagtgccaagggagagttgcttagaatcctagctattcaagcaccagcaccttttcttcagcagcagaaatcagtaccagttcatcagcaaggacctccaccaggcttcaccaaccgttctcgtcctcagtgttcttattgcactgaccttgggcatgttcgggagacttgctggaagctgaatccacacctcaaaccaaaaaagaaaggttatcgtcctaaggtaaaagcaggtgctgttcaattggtccaagaaccagatttctatggcgtggctagacaagatcattatacagtaggtggaggtactcctaccgcctctatagctggtcgtggtaagattggtatggctttaaagg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

163

Amino Acids

18.41

Weight (kDa)

9.84

Isoelectric Point (pI)

47.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000146)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19561 FvH4_1g25371 FvH4_1g25961 FvH4_2g00352 FvH4_2g00861 FvH4_2g04952 FvH4_2g05413 FvH4_2g07531 FvH4_2g08961 FvH4_2g25141 FvH4_2g27292 FvH4_3g18164 FvH4_3g19921 FvH4_3g43870 FvH4_4g14441 FvH4_4g15581 FvH4_4g15582 FvH4_4g16890 FvH4_4g19782 FvH4_4g33444 FvH4_4g33921 FvH4_5g22281 FvH4_5g22282 FvH4_5g32571 FvH4_5g37451 FvH4_5g39631 FvH4_6g04721 FvH4_6g11661 FvH4_6g20571 FvH4_6g32791 FvH4_7g23184
prunus_persica Prupe.1G090900_v2.0.a1 Prupe.1G241200_v2.0.a1 Prupe.1G534100_v2.0.a1 Prupe.3G076700_v2.0.a1 Prupe.4G150800_v2.0.a1 Prupe.4G181800_v2.0.a1 Prupe.4G240900_v2.0.a1 Prupe.4G247600_v2.0.a1 Prupe.6G115900_v2.0.a1 Prupe.6G327500_v2.0.a1 Prupe.8G071700_v2.0.a1
pyrus_communis pycom06g11480 pycom10g08330 pycom15g04320 pycom15g04350 pycom15g12620 pycom2874g00060
rosa_chinensis RchiOBHm_Chr1g0317241 RchiOBHm_Chr1g0341801 RchiOBHm_Chr1g0341931 RchiOBHm_Chr1g0359621 RchiOBHm_Chr2g0113741 RchiOBHm_Chr2g0117261 RchiOBHm_Chr2g0138831 RchiOBHm_Chr2g0141421 RchiOBHm_Chr2g0145281 RchiOBHm_Chr2g0152991 RchiOBHm_Chr3g0448001 RchiOBHm_Chr3g0450981 RchiOBHm_Chr3g0455161 RchiOBHm_Chr3g0457401 RchiOBHm_Chr3g0460001 RchiOBHm_Chr4g0387431 RchiOBHm_Chr4g0388741 RchiOBHm_Chr4g0444201 RchiOBHm_Chr4g0444261 RchiOBHm_Chr5g0010221 RchiOBHm_Chr6g0271721 RchiOBHm_Chr6g0274641 RchiOBHm_Chr6g0294691 RchiOBHm_Chr7g0237031 RchiOBHm_Chr7g0238461 RchiOBHm_Chr7g0239981
rosa_laevigata RLG00000009017
rosa_multiflora Rmu_co7986768.1_g000001 Rmu_co8302239.1_g000001 Rmu_co8485799.1_g000001 Rmu_sc0000061.1_g000013 Rmu_sc0000303.1_g000034 Rmu_sc0000303.1_g000035 Rmu_sc0000315.1_g000017 Rmu_sc0000349.1_g000003 Rmu_sc0000498.1_g000068 Rmu_sc0000508.1_g000014 Rmu_sc0000602.1_g000001 Rmu_sc0000633.1_g000002 Rmu_sc0000638.1_g000030 Rmu_sc0000756.1_g000016 Rmu_sc0000756.1_g000017 Rmu_sc0000785.1_g000037 Rmu_sc0000795.1_g000017 Rmu_sc0000796.1_g000030 Rmu_sc0000863.1_g000023 Rmu_sc0000920.1_g000021 Rmu_sc0000960.1_g000015 Rmu_sc0000982.1_g000102 Rmu_sc0001036.1_g000008 Rmu_sc0001036.1_g000009 Rmu_sc0001643.1_g000029 Rmu_sc0001687.1_g000026 Rmu_sc0001708.1_g000037 Rmu_sc0001768.1_g000015 Rmu_sc0001790.1_g000022 Rmu_sc0002180.1_g000007 Rmu_sc0002211.1_g000006 Rmu_sc0002270.1_g000010 Rmu_sc0002404.1_g000031 Rmu_sc0002858.1_g000016 Rmu_sc0003063.1_g000028 Rmu_sc0003730.1_g000017 Rmu_sc0004087.1_g000020 Rmu_sc0004618.1_g000048 Rmu_sc0004724.1_g000005 Rmu_sc0005167.1_g000036 Rmu_sc0005781.1_g000003 Rmu_sc0005878.1_g000012 Rmu_sc0006011.1_g000003 Rmu_sc0006343.1_g000011 Rmu_sc0006573.1_g000007 Rmu_sc0006599.1_g000007 Rmu_sc0006803.1_g000014 Rmu_sc0006836.1_g000002 Rmu_sc0006849.1_g000002 Rmu_sc0007109.1_g000009 Rmu_sc0009268.1_g000016 Rmu_sc0009618.1_g000017 Rmu_sc0009674.1_g000009 Rmu_sc0010244.1_g000009 Rmu_sc0011151.1_g000004 Rmu_sc0011356.1_g000001 Rmu_sc0011674.1_g000002 Rmu_sc0011778.1_g000016 Rmu_sc0012342.1_g000001 Rmu_sc0012467.1_g000002 Rmu_sc0012574.1_g000003 Rmu_sc0012913.1_g000005 Rmu_sc0013612.1_g000020 Rmu_sc0014824.1_g000001 Rmu_sc0017869.1_g000002 Rmu_sc0018085.1_g000003 Rmu_sc0024789.1_g000001 Rmu_sc0025106.1_g000013 Rmu_sc0034502.1_g000001 Rmu_sc0034547.1_g000001 Rmu_sc0035094.1_g000001 Rmu_sc0035095.1_g000001 Rmu_ssc0000100.1_g000027 Rmu_ssc0000244.1_g000005 Rmu_ssc0000371.1_g000029 Rmu_ssc0000381.1_g000004
rosa_roxburghii Rroxscaffold_1G00015480 Rroxscaffold_1G00023580 Rroxscaffold_1G00039340 Rroxscaffold_1G00047080 Rroxscaffold_2G00095820 Rroxscaffold_2G00125200 Rroxscaffold_2G00128330 Rroxscaffold_3G00270860
rosa_rugosa Rorug06G0120700
rosa_samantha Rh3BG173100 Rh6AG089600 Rh7AG488100 Rh7DG389600
rosa_wichuraiana Rw0G001150 Rw0G001990 Rw0G002010 Rw0G019540 Rw1G013730 Rw1G024110 Rw1G029190 Rw2G018850 Rw2G021090 Rw2G022260 Rw2G023180 Rw2G027280 Rw3G010190 Rw3G020660 Rw3G029380 Rw4G002390 Rw4G002690 Rw4G033260 Rw5G011960 Rw5G023110 Rw5G025250 Rw5G028950 Rw5G033740 Rw5G033950 Rw5G037900 Rw6G009640 Rw6G011620 Rw6G027720 Rw7G010680 Rw7G042070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 353
Acc36I ACCTGC 1 cut(s) 353
Acc65I GGTACC 1 cut(s) 66
AccB1I GGYRCC 1 cut(s) 66
AciI CCGC 1 cut(s) 447
AcuI CTGAAG 1 cut(s) 173
AfaI GTAC 3 cut(s) 68, 207, 439
AfiI CCNNNNNNNGG 1 cut(s) 233
AgsI TTSAA 2 cut(s) 170, 374
AjnI CCWGG 1 cut(s) 232
AluBI AGCT 4 cut(s) 85, 164, 310, 458
AluI AGCT 4 cut(s) 85, 164, 310, 458
Alw26I GTCTC 1 cut(s) 290
AlwNI CAGNNNCTG 1 cut(s) 368
ApeKI GCWGC 1 cut(s) 193
Asp700I GAANNNNTTC 2 cut(s) 57, 93
Asp718I GGTACC 1 cut(s) 66
AspS9I GGNCC 2 cut(s) 224, 379
AsuHPI GGTGA 1 cut(s) 232
AvaII GGWCC 2 cut(s) 224, 379
AxyI CCTNAGG 1 cut(s) 351
BanI GGYRCC 1 cut(s) 66
BbvI GCAGC 1 cut(s) 205
BciT130I CCWGG 1 cut(s) 234
BclI TGATCA 1 cut(s) 19
BcoDI GTCTC 1 cut(s) 290
BfaI CTAG 3 cut(s) 86, 161, 408
BfmI CTRYAG 1 cut(s) 453
BfuAI ACCTGC 1 cut(s) 353
BglII AGATCT 1 cut(s) 55
BisI GCNGC 1 cut(s) 194
BlsI GCNGC 1 cut(s) 195
Bme1390I CCNGG 1 cut(s) 234
Bme18I GGWCC 2 cut(s) 224, 379
BmgT120I GGNCC 2 cut(s) 224, 379
BmiI GGNNCC 1 cut(s) 68
BmrFI CCNGG 1 cut(s) 234
BsaJI CCNNGG 2 cut(s) 138, 280
Bsc4I CCNNNNNNNGG 1 cut(s) 233
Bse1I ACTGG 1 cut(s) 209
Bse21I CCTNAGG 1 cut(s) 351
BseBI CCWGG 1 cut(s) 234
BseDI CCNNGG 2 cut(s) 138, 280
BseLI CCNNNNNNNGG 1 cut(s) 233
BseMII CTCAG 2 cut(s) 98, 272
BseNI ACTGG 1 cut(s) 209
BseXI GCAGC 1 cut(s) 205
BshNI GGYRCC 1 cut(s) 66
BslI CCNNNNNNNGG 1 cut(s) 233
BsmAI GTCTC 1 cut(s) 290
Bsp143I GATC 4 cut(s) 19, 39, 55, 415
BspACI CCGC 1 cut(s) 447
BspCNI CTCAG 2 cut(s) 99, 271
BspLI GGNNCC 1 cut(s) 68
BspMI ACCTGC 1 cut(s) 353
BspT107I GGYRCC 1 cut(s) 66
BsrI ACTGG 1 cut(s) 209
BssECI CCNNGG 2 cut(s) 138, 280
BssMI GATC 4 cut(s) 19, 39, 55, 415
BssT1I CCWWGG 2 cut(s) 138, 280
Bst2UI CCWGG 1 cut(s) 234
Bst4CI ACNGT 3 cut(s) 134, 248, 427
BstDEI CTNAG 4 cut(s) 107, 152, 258, 351
BstENI CCTNNNNNAGG 1 cut(s) 231
BstKTI GATC 4 cut(s) 22, 42, 58, 418
BstMAI GTCTC 1 cut(s) 290
BstMBI GATC 4 cut(s) 19, 39, 55, 415
BstMWI GCNNNNNNNGC 2 cut(s) 170, 455
BstNI CCWGG 1 cut(s) 234
BstNSI RCATGY 1 cut(s) 290
BstSCI CCNGG 1 cut(s) 232
BstSFI CTRYAG 1 cut(s) 453
BstV1I GCAGC 1 cut(s) 205
BstX2I RGATCY 1 cut(s) 55
BstYI RGATCY 1 cut(s) 55
Bsu36I CCTNAGG 1 cut(s) 351
BtsIMutI CAGTG 3 cut(s) 139, 266, 273
BveI ACCTGC 1 cut(s) 353
CaiI CAGNNNCTG 1 cut(s) 368
Cfr13I GGNCC 2 cut(s) 224, 379
CseI GACGC 1 cut(s) 17
Csp6I GTAC 3 cut(s) 67, 206, 438
CviAII CATG 1 cut(s) 287
CviJI RGCY 9 cut(s) 11, 85, 115, 164, 237, 310, 407, 458, 482
CviKI_1 RGCY 9 cut(s) 11, 85, 115, 164, 237, 310, 407, 458, 482
CviQI GTAC 3 cut(s) 67, 206, 438
DdeI CTNAG 4 cut(s) 107, 152, 258, 351
DpnI GATC 4 cut(s) 21, 41, 57, 417
DpnII GATC 4 cut(s) 19, 39, 55, 415
DraI TTTAAA 1 cut(s) 486
Eco130I CCWWGG 2 cut(s) 138, 280
Eco47I GGWCC 2 cut(s) 224, 379
Eco57I CTGAAG 1 cut(s) 173
Eco81I CCTNAGG 1 cut(s) 351
EcoNI CCTNNNNNAGG 1 cut(s) 231
EcoO109I RGGNCCY 1 cut(s) 224
EcoRII CCWGG 1 cut(s) 232
EcoT14I CCWWGG 2 cut(s) 138, 280
ErhI CCWWGG 2 cut(s) 138, 280
FaeI CATG 1 cut(s) 290
FaiI YATR 8 cut(s) 5, 7, 129, 288, 399, 423, 455, 479
FatI CATG 1 cut(s) 286
FbaI TGATCA 1 cut(s) 19
Fnu4HI GCNGC 1 cut(s) 194
Fsp4HI GCNGC 1 cut(s) 194
FspBI CTAG 3 cut(s) 86, 161, 408
GluI GCNGC 1 cut(s) 194
HgaI GACGC 1 cut(s) 17
Hin1II CATG 1 cut(s) 290
HinfI GANTC 3 cut(s) 46, 156, 313
HphI GGTGA 1 cut(s) 232
Hpy188I TCNGA 1 cut(s) 24
Hpy188III TCNNGA 4 cut(s) 43, 50, 106, 293
HpyAV CCTTC 1 cut(s) 67
HpyCH4III ACNGT 3 cut(s) 134, 248, 427
HpyCH4V TGCA 2 cut(s) 36, 273
HpyF10VI GCNNNNNNNGC 2 cut(s) 170, 455
HpyF3I CTNAG 4 cut(s) 107, 152, 258, 351
Hsp92II CATG 1 cut(s) 290
KpnI GGTACC 1 cut(s) 70
Ksp22I TGATCA 1 cut(s) 19
Kzo9I GATC 4 cut(s) 19, 39, 55, 415
Lsp1109I GCAGC 1 cut(s) 205
MaeI CTAG 3 cut(s) 86, 161, 408
MalI GATC 4 cut(s) 21, 41, 57, 417
MboI GATC 4 cut(s) 19, 39, 55, 415
MboII GAAGA 4 cut(s) 50, 65, 91, 179
MfeI CAATTG 1 cut(s) 374
MflI RGATCY 1 cut(s) 55
MluCI AATT 2 cut(s) 15, 374
MnlI CCTC 6 cut(s) 104, 237, 267, 332, 428, 460
MroXI GAANNNNTTC 2 cut(s) 57, 93
MseI TTAA 1 cut(s) 485
MslI CAYNNNNRTG 1 cut(s) 132
MspR9I CCNGG 1 cut(s) 234
MunI CAATTG 1 cut(s) 374
MvaI CCWGG 1 cut(s) 234
MwoI GCNNNNNNNGC 2 cut(s) 170, 455
NdeII GATC 4 cut(s) 19, 39, 55, 415
NlaIII CATG 1 cut(s) 290
NlaIV GGNNCC 1 cut(s) 68
NspI RCATGY 1 cut(s) 290
PaqCI CACCTGC 1 cut(s) 353
PdmI GAANNNNTTC 2 cut(s) 57, 93
PfeI GAWTC 3 cut(s) 46, 156, 313
PkrI GCNGC 1 cut(s) 195
PpuMI RGGWCCY 1 cut(s) 224
Psp5II RGGWCCY 1 cut(s) 224
Psp6I CCWGG 1 cut(s) 232
PspGI CCWGG 1 cut(s) 232
PspN4I GGNNCC 1 cut(s) 68
PspPI GGNCC 2 cut(s) 224, 379
PspPPI RGGWCCY 1 cut(s) 224
PstNI CAGNNNCTG 1 cut(s) 368
PsuI RGATCY 1 cut(s) 55
RsaI GTAC 3 cut(s) 68, 207, 439
RsaNI GTAC 3 cut(s) 67, 206, 438
RseI CAYNNNNRTG 1 cut(s) 132
SaqAI TTAA 1 cut(s) 485
SatI GCNGC 1 cut(s) 194
Sau3AI GATC 4 cut(s) 19, 39, 55, 415
Sau96I GGNCC 2 cut(s) 224, 379
ScrFI CCNGG 1 cut(s) 234
SfcI CTRYAG 1 cut(s) 453
SinI GGWCC 2 cut(s) 224, 379
SmiMI CAYNNNNRTG 1 cut(s) 132
Sse9I AATT 2 cut(s) 15, 374
SsiI CCGC 1 cut(s) 447
SspMI CTAG 3 cut(s) 86, 161, 408
StyD4I CCNGG 1 cut(s) 232
StyI CCWWGG 2 cut(s) 138, 280
TaaI ACNGT 3 cut(s) 134, 248, 427
TasI AATT 2 cut(s) 15, 374
TfiI GAWTC 3 cut(s) 46, 156, 313
Tru1I TTAA 1 cut(s) 485
Tru9I TTAA 1 cut(s) 485
TscAI CASTG 3 cut(s) 139, 266, 280
TseI GCWGC 1 cut(s) 193
TspDTI ATGAA 1 cut(s) 203
TspRI CASTG 3 cut(s) 139, 266, 280
VpaK11BI GGWCC 2 cut(s) 224, 379
XagI CCTNNNNNAGG 1 cut(s) 231
XceI RCATGY 1 cut(s) 290
XmnI GAANNNNTTC 2 cut(s) 57, 93
XspI CTAG 3 cut(s) 86, 161, 408
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.