RchiOBHm_Chr2g0141421
RLK Family

Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000146
Physical Location & Seq
Forward (+)
58984607 .. 58986348
1742 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51171

Sequence Viewer

Length: 1161 bp
ATGGGTGGTGATCAAAGTGAAGGTCAGAGTTCTAAGACCAATGAGGTTCAGAAAGTTGAGGTCTCTGTTAAGAGCTCAGAAGGTGGTTCTTTTGGTGGTACCAAACTCACTGGTACCAACTTCCGAACATGGAAGAAGATTATGTCTGTTTATCTTCGCGGGATACACAAGATGGGACATGTGACAGGAACAATCAAGGTTCCTCGTGAAGATGACATAGAAGCCTATGCTAAGTGGGAAGATGATGATGGGTTAGTAATGTCTATTTTATTTAGAGCCATGACTGATGATGTGCTACAGATGGTAGAGGAATGTGACACTGCTGAGGCAATCTGGAAAACGTTGGGAGATCTCTATACAAATGAGTCTGATTTTATACAGGTTCATGAACTGATGTGCAAAGCTGCAGGAATGCAACAGAATAGGCAACCAGTGTCAGTGTTTTTCACCAAACTGAAGAATGTATGGGCTGAAATTGATCAGAAGCGTCCCTGCAAGATCAAGAATCAGGAAGATCTTGTGTGGTACCAGAAGGAGAAGGAGCTAGAAAGGGTTCATGTCTTCCTGAGAGGGCTTGATGAGAAGCATAGCAGTGCCAAGGGAGAATTGCTCAGAATGACAGACCCTCCTAGTTTGAACACAGCTTTTACATACATCCGCAAGGATGAGTCTCAGCAGGAAAGTGTCAAACATGCACAGGTTGAAGTATCTAGCCTAGCCATTCAGGCCAAGTCACCTGCACCTTTCCTTCAGCAACAGAGTTCAGCCCCACTTCATCAGCAAGGTTTCCCGCACGGCTTCTCCAACCGTCCTCGTCCTCAATGCTCTTATTGCAACGATCTTGGGCATGTTCGGGAGACTTGTTGGAAGTTGAACCCACACCTTAAACCTAAAAAACAAGGTTATCGCCCAAAGGGGAAAGCAGCTGCGGTTCACTTGGTCCAAGAACCGGATTTCTATGGAGTGGCTGGCCAAGATCATCATACAGCAGGTGGAGCTACCCCTACAGCCTCTATAGCTGGTCGAGGTAAAATTGGATCTTCTCACCAGGGAGATAGTCGGTCGGGGGTATCTGAGGGGCCGGTTGTTCCATCTGGATCAGACATATGCAGGAGAGAAACCAGGAGCACCATCCCGAGCCGCTTTGACTTCGACTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotran_gag_2

Protein Analysis

386

Amino Acids

43.07

Weight (kDa)

7.66

Isoelectric Point (pI)

46.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 58 - 128 8.8e-09 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000146)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19561 FvH4_1g25371 FvH4_1g25961 FvH4_2g00352 FvH4_2g00861 FvH4_2g04952 FvH4_2g05413 FvH4_2g07531 FvH4_2g08961 FvH4_2g25141 FvH4_2g27292 FvH4_3g18164 FvH4_3g19921 FvH4_3g43870 FvH4_4g14441 FvH4_4g15581 FvH4_4g15582 FvH4_4g16890 FvH4_4g19782 FvH4_4g33444 FvH4_4g33921 FvH4_5g22281 FvH4_5g22282 FvH4_5g32571 FvH4_5g37451 FvH4_5g39631 FvH4_6g04721 FvH4_6g11661 FvH4_6g20571 FvH4_6g32791 FvH4_7g23184
prunus_persica Prupe.1G090900_v2.0.a1 Prupe.1G241200_v2.0.a1 Prupe.1G534100_v2.0.a1 Prupe.3G076700_v2.0.a1 Prupe.4G150800_v2.0.a1 Prupe.4G181800_v2.0.a1 Prupe.4G240900_v2.0.a1 Prupe.4G247600_v2.0.a1 Prupe.6G115900_v2.0.a1 Prupe.6G327500_v2.0.a1 Prupe.8G071700_v2.0.a1
pyrus_communis pycom06g11480 pycom10g08330 pycom15g04320 pycom15g04350 pycom15g12620 pycom2874g00060
rosa_chinensis RchiOBHm_Chr1g0317241 RchiOBHm_Chr1g0341801 RchiOBHm_Chr1g0341931 RchiOBHm_Chr1g0359621 RchiOBHm_Chr2g0113741 RchiOBHm_Chr2g0117261 RchiOBHm_Chr2g0138831 RchiOBHm_Chr2g0141421 RchiOBHm_Chr2g0145281 RchiOBHm_Chr2g0152991 RchiOBHm_Chr3g0448001 RchiOBHm_Chr3g0450981 RchiOBHm_Chr3g0455161 RchiOBHm_Chr3g0457401 RchiOBHm_Chr3g0460001 RchiOBHm_Chr4g0387431 RchiOBHm_Chr4g0388741 RchiOBHm_Chr4g0444201 RchiOBHm_Chr4g0444261 RchiOBHm_Chr5g0010221 RchiOBHm_Chr6g0271721 RchiOBHm_Chr6g0274641 RchiOBHm_Chr6g0294691 RchiOBHm_Chr7g0237031 RchiOBHm_Chr7g0238461 RchiOBHm_Chr7g0239981
rosa_laevigata RLG00000009017
rosa_multiflora Rmu_co7986768.1_g000001 Rmu_co8302239.1_g000001 Rmu_co8485799.1_g000001 Rmu_sc0000061.1_g000013 Rmu_sc0000303.1_g000034 Rmu_sc0000303.1_g000035 Rmu_sc0000315.1_g000017 Rmu_sc0000349.1_g000003 Rmu_sc0000498.1_g000068 Rmu_sc0000508.1_g000014 Rmu_sc0000602.1_g000001 Rmu_sc0000633.1_g000002 Rmu_sc0000638.1_g000030 Rmu_sc0000756.1_g000016 Rmu_sc0000756.1_g000017 Rmu_sc0000785.1_g000037 Rmu_sc0000795.1_g000017 Rmu_sc0000796.1_g000030 Rmu_sc0000863.1_g000023 Rmu_sc0000920.1_g000021 Rmu_sc0000960.1_g000015 Rmu_sc0000982.1_g000102 Rmu_sc0001036.1_g000008 Rmu_sc0001036.1_g000009 Rmu_sc0001643.1_g000029 Rmu_sc0001687.1_g000026 Rmu_sc0001708.1_g000037 Rmu_sc0001768.1_g000015 Rmu_sc0001790.1_g000022 Rmu_sc0002180.1_g000007 Rmu_sc0002211.1_g000006 Rmu_sc0002270.1_g000010 Rmu_sc0002404.1_g000031 Rmu_sc0002858.1_g000016 Rmu_sc0003063.1_g000028 Rmu_sc0003730.1_g000017 Rmu_sc0004087.1_g000020 Rmu_sc0004618.1_g000048 Rmu_sc0004724.1_g000005 Rmu_sc0005167.1_g000036 Rmu_sc0005781.1_g000003 Rmu_sc0005878.1_g000012 Rmu_sc0006011.1_g000003 Rmu_sc0006343.1_g000011 Rmu_sc0006573.1_g000007 Rmu_sc0006599.1_g000007 Rmu_sc0006803.1_g000014 Rmu_sc0006836.1_g000002 Rmu_sc0006849.1_g000002 Rmu_sc0007109.1_g000009 Rmu_sc0009268.1_g000016 Rmu_sc0009618.1_g000017 Rmu_sc0009674.1_g000009 Rmu_sc0010244.1_g000009 Rmu_sc0011151.1_g000004 Rmu_sc0011356.1_g000001 Rmu_sc0011674.1_g000002 Rmu_sc0011778.1_g000016 Rmu_sc0012342.1_g000001 Rmu_sc0012467.1_g000002 Rmu_sc0012574.1_g000003 Rmu_sc0012913.1_g000005 Rmu_sc0013612.1_g000020 Rmu_sc0014824.1_g000001 Rmu_sc0017869.1_g000002 Rmu_sc0018085.1_g000003 Rmu_sc0024789.1_g000001 Rmu_sc0025106.1_g000013 Rmu_sc0034502.1_g000001 Rmu_sc0034547.1_g000001 Rmu_sc0035094.1_g000001 Rmu_sc0035095.1_g000001 Rmu_ssc0000100.1_g000027 Rmu_ssc0000244.1_g000005 Rmu_ssc0000371.1_g000029 Rmu_ssc0000381.1_g000004
rosa_roxburghii Rroxscaffold_1G00015480 Rroxscaffold_1G00023580 Rroxscaffold_1G00039340 Rroxscaffold_1G00047080 Rroxscaffold_2G00095820 Rroxscaffold_2G00125200 Rroxscaffold_2G00128330 Rroxscaffold_3G00270860
rosa_rugosa Rorug06G0120700
rosa_samantha Rh3BG173100 Rh6AG089600 Rh7AG488100 Rh7DG389600
rosa_wichuraiana Rw0G001150 Rw0G001990 Rw0G002010 Rw0G019540 Rw1G013730 Rw1G024110 Rw1G029190 Rw2G018850 Rw2G021090 Rw2G022260 Rw2G023180 Rw2G027280 Rw3G010190 Rw3G020660 Rw3G029380 Rw4G002390 Rw4G002690 Rw4G033260 Rw5G011960 Rw5G023110 Rw5G025250 Rw5G028950 Rw5G033740 Rw5G033950 Rw5G037900 Rw6G009640 Rw6G011620 Rw6G027720 Rw7G010680 Rw7G042070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 745, 980
Acc36I ACCTGC 2 cut(s) 745, 980
Acc65I GGTACC 3 cut(s) 98, 113, 525
AccB1I GGYRCC 3 cut(s) 98, 113, 525
AccII CGCG 1 cut(s) 159
AciI CCGC 5 cut(s) 159, 658, 791, 929, 1141
AclI AACGTT 1 cut(s) 341
AclWI GGATC 2 cut(s) 1045, 1105
AcoI YGGCCR 1 cut(s) 970
AcuI CTGAAG 2 cut(s) 476, 734
AfaI GTAC 3 cut(s) 100, 115, 527
AfiI CCNNNNNNNGG 1 cut(s) 949
AflIII ACRYGT 1 cut(s) 178
AgsI TTSAA 3 cut(s) 637, 704, 874
AjnI CCWGG 2 cut(s) 1047, 1121
AluBI AGCT 7 cut(s) 75, 404, 544, 644, 926, 998, 1019
AluI AGCT 7 cut(s) 75, 404, 544, 644, 926, 998, 1019
Alw21I GWGCWC 2 cut(s) 77, 1130
Alw26I GTCTC 3 cut(s) 67, 675, 851
AlwI GGATC 2 cut(s) 1045, 1105
Ama87I CYCGRG 1 cut(s) 1135
AoxI GGCC 3 cut(s) 726, 970, 1079
ApeKI GCWGC 3 cut(s) 404, 923, 926
ArsI GACNNNNNNTTYG 2 cut(s) 7, 39
Asp700I GAANNNNTTC 1 cut(s) 552
Asp718I GGTACC 3 cut(s) 98, 113, 525
AspS9I GGNCC 2 cut(s) 940, 1079
AsuHPI GGTGA 4 cut(s) 20, 439, 726, 1037
AvaI CYCGRG 1 cut(s) 1135
AvaII GGWCC 1 cut(s) 940
BalI TGGCCA 1 cut(s) 972
BanI GGYRCC 3 cut(s) 98, 113, 525
BanII GRGCYC 1 cut(s) 77
BauI CACGAG 1 cut(s) 204
BbsI GAAGAC 1 cut(s) 553
Bbv12I GWGCWC 2 cut(s) 77, 1130
BbvCI CCTCAGC 1 cut(s) 324
BbvI GCAGC 3 cut(s) 391, 913, 935
BccI CCATC 5 cut(s) 166, 242, 295, 1099, 1139
BceAI ACGGC 1 cut(s) 811
BciT130I CCWGG 2 cut(s) 1049, 1123
BciVI GTATCC 1 cut(s) 156
BclI TGATCA 2 cut(s) 10, 478
BcoDI GTCTC 3 cut(s) 67, 675, 851
BfaI CTAG 4 cut(s) 545, 630, 711, 716
BfmI CTRYAG 4 cut(s) 296, 405, 1005, 1014
BfuAI ACCTGC 2 cut(s) 745, 980
BfuI GTATCC 1 cut(s) 156
BglI GCCNNNNNGGC 1 cut(s) 725
BglII AGATCT 2 cut(s) 349, 514
BisI GCNGC 4 cut(s) 405, 924, 927, 1141
BlsI GCNGC 4 cut(s) 406, 925, 928, 1142
Bme1390I CCNGG 2 cut(s) 1049, 1123
Bme18I GGWCC 1 cut(s) 940
BmeT110I CYCGRG 1 cut(s) 1135
BmgT120I GGNCC 2 cut(s) 940, 1079
BmiI GGNNCC 5 cut(s) 100, 115, 201, 527, 1080
BmrFI CCNGG 2 cut(s) 1049, 1123
BpiI GAAGAC 1 cut(s) 553
BplI GAGNNNNNCTC 2 cut(s) 594, 626
Bpu10I CCTNAGC 1 cut(s) 324
BsaI GGTCTC 1 cut(s) 67
BsaJI CCNNGG 2 cut(s) 597, 1048
BsaWI WCCGGW 1 cut(s) 949
BsaXI ACNNNNNCTCC 4 cut(s) 610, 640, 785, 815
Bsc4I CCNNNNNNNGG 1 cut(s) 949
Bse118I RCCGGY 1 cut(s) 1081
Bse1I ACTGG 2 cut(s) 115, 431
BseBI CCWGG 2 cut(s) 1049, 1123
BseDI CCNNGG 2 cut(s) 597, 1048
BseGI GGATG 3 cut(s) 654, 670, 1131
BseLI CCNNNNNNNGG 1 cut(s) 949
BseMII CTCAG 6 cut(s) 90, 315, 557, 625, 686, 1065
BseNI ACTGG 2 cut(s) 115, 431
BseXI GCAGC 3 cut(s) 391, 913, 935
BsgI GTGCAG 1 cut(s) 723
Bsh1236I CGCG 1 cut(s) 159
Bsh1285I CGRYCG 1 cut(s) 1064
BshFI GGCC 3 cut(s) 728, 972, 1081
BshNI GGYRCC 3 cut(s) 98, 113, 525
BsiEI CGRYCG 1 cut(s) 1064
BsiHKAI GWGCWC 2 cut(s) 77, 1130
BsiHKCI CYCGRG 1 cut(s) 1135
BsiSI CCGG 2 cut(s) 950, 1082
BslFI GGGAC 2 cut(s) 189, 474
BslI CCNNNNNNNGG 1 cut(s) 949
BsmAI GTCTC 3 cut(s) 67, 675, 851
BsmFI GGGAC 2 cut(s) 189, 474
BsmI GAATGC 1 cut(s) 417
BsnI GGCC 3 cut(s) 728, 972, 1081
Bso31I GGTCTC 1 cut(s) 67
BsoBI CYCGRG 1 cut(s) 1135
Bsp1286I GDGCHC 2 cut(s) 77, 1130
Bsp143I GATC 9 cut(s) 10, 349, 478, 498, 514, 838, 976, 1037, 1097
BspACI CCGC 5 cut(s) 159, 658, 791, 929, 1141
BspANI GGCC 3 cut(s) 728, 972, 1081
BspCNI CTCAG 6 cut(s) 89, 316, 558, 624, 685, 1066
BspFNI CGCG 1 cut(s) 159
BspHI TCATGA 1 cut(s) 385
BspLI GGNNCC 5 cut(s) 100, 115, 201, 527, 1080
BspMAI CTGCAG 1 cut(s) 409
BspMI ACCTGC 2 cut(s) 745, 980
BspPI GGATC 2 cut(s) 1045, 1105
BspT107I GGYRCC 3 cut(s) 98, 113, 525
BspTNI GGTCTC 1 cut(s) 67
BsrFI RCCGGY 1 cut(s) 1081
BsrI ACTGG 2 cut(s) 115, 431
BssAI RCCGGY 1 cut(s) 1081
BssECI CCNNGG 2 cut(s) 597, 1048
BssMI GATC 9 cut(s) 10, 349, 478, 498, 514, 838, 976, 1037, 1097
BssSI CACGAG 1 cut(s) 204
BssT1I CCWWGG 1 cut(s) 597
Bst2BI CACGAG 1 cut(s) 204
Bst2UI CCWGG 2 cut(s) 1049, 1123
Bst4CI ACNGT 1 cut(s) 809
BstC8I GCNNGC 1 cut(s) 970
BstDEI CTNAG 8 cut(s) 33, 76, 231, 324, 566, 611, 672, 1074
BstF5I GGATG 3 cut(s) 654, 670, 1131
BstFNI CGCG 1 cut(s) 159
BstKTI GATC 9 cut(s) 13, 352, 481, 501, 517, 841, 979, 1040, 1100
BstMAI GTCTC 3 cut(s) 67, 675, 851
BstMBI GATC 9 cut(s) 10, 349, 478, 498, 514, 838, 976, 1037, 1097
BstMCI CGRYCG 1 cut(s) 1064
BstMWI GCNNNNNNNGC 4 cut(s) 725, 831, 995, 1016
BstNI CCWGG 2 cut(s) 1049, 1123
BstNSI RCATGY 3 cut(s) 182, 695, 851
BstSCI CCNGG 2 cut(s) 1047, 1121
BstSFI CTRYAG 4 cut(s) 296, 405, 1005, 1014
BstUI CGCG 1 cut(s) 159
BstV1I GCAGC 3 cut(s) 391, 913, 935
BstV2I GAAGAC 1 cut(s) 553
BstX2I RGATCY 3 cut(s) 349, 514, 1037
BstYI RGATCY 3 cut(s) 349, 514, 1037
BsuI GTATCC 1 cut(s) 156
BsuRI GGCC 3 cut(s) 728, 972, 1081
BtsCI GGATG 3 cut(s) 654, 670, 1131
BtsI GCAGTG 2 cut(s) 318, 598
BtsIMutI CAGTG 5 cut(s) 108, 318, 438, 444, 598
BveI ACCTGC 2 cut(s) 745, 980
Cac8I GCNNGC 1 cut(s) 970
CciI TCATGA 1 cut(s) 385
Cfr10I RCCGGY 1 cut(s) 1081
Cfr13I GGNCC 2 cut(s) 940, 1079
CseI GACGC 1 cut(s) 476
Csp6I GTAC 3 cut(s) 99, 114, 526
CviAII CATG 7 cut(s) 129, 179, 280, 386, 557, 692, 848
CviQI GTAC 3 cut(s) 99, 114, 526
DdeI CTNAG 8 cut(s) 33, 76, 231, 324, 566, 611, 672, 1074
DpnI GATC 9 cut(s) 12, 351, 480, 500, 516, 840, 978, 1039, 1099
DpnII GATC 9 cut(s) 10, 349, 478, 498, 514, 838, 976, 1037, 1097
EaeI YGGCCR 1 cut(s) 970
Ecl136II GAGCTC 1 cut(s) 75
Eco130I CCWWGG 1 cut(s) 597
Eco24I GRGCYC 1 cut(s) 77
Eco31I GGTCTC 1 cut(s) 67
Eco47I GGWCC 1 cut(s) 940
Eco53kI GAGCTC 1 cut(s) 75
Eco57I CTGAAG 2 cut(s) 476, 734
Eco88I CYCGRG 1 cut(s) 1135
EcoICRI GAGCTC 1 cut(s) 75
EcoRII CCWGG 2 cut(s) 1047, 1121
EcoT14I CCWWGG 1 cut(s) 597
EcoT38I GRGCYC 1 cut(s) 77
ErhI CCWWGG 1 cut(s) 597
FaeI CATG 7 cut(s) 132, 182, 283, 389, 560, 695, 851
FaqI GGGAC 2 cut(s) 189, 474
FatI CATG 7 cut(s) 128, 178, 279, 385, 556, 691, 847
FauI CCCGC 2 cut(s) 152, 798
FauNDI CATATG 1 cut(s) 1106
FbaI TGATCA 2 cut(s) 10, 478
Fnu4HI GCNGC 4 cut(s) 405, 924, 927, 1141
FokI GGATG 3 cut(s) 641, 677, 1118
FriOI GRGCYC 1 cut(s) 77
Fsp4HI GCNGC 4 cut(s) 405, 924, 927, 1141
FspBI CTAG 4 cut(s) 545, 630, 711, 716
GluI GCNGC 4 cut(s) 405, 924, 927, 1141
HaeIII GGCC 3 cut(s) 728, 972, 1081
HapII CCGG 2 cut(s) 950, 1082
HgaI GACGC 1 cut(s) 476
Hin1II CATG 7 cut(s) 132, 182, 283, 389, 560, 695, 851
HinfI GANTC 3 cut(s) 365, 505, 668
HpaII CCGG 2 cut(s) 950, 1082
HphI GGTGA 4 cut(s) 20, 439, 726, 1037
Hpy166II GTNNAC 1 cut(s) 934
Hpy188III TCNNGA 9 cut(s) 206, 334, 386, 502, 509, 565, 854, 1095, 1135
Hpy8I GTNNAC 1 cut(s) 934
HpyAV CCTTC 5 cut(s) 14, 74, 526, 532, 758
HpyCH4III ACNGT 1 cut(s) 809
HpyCH4IV ACGT 1 cut(s) 341
HpyCH4V TGCA 8 cut(s) 399, 407, 415, 495, 695, 740, 834, 1110
HpyF10VI GCNNNNNNNGC 4 cut(s) 725, 831, 995, 1016
HpyF3I CTNAG 8 cut(s) 33, 76, 231, 324, 566, 611, 672, 1074
HpySE526I ACGT 1 cut(s) 341
Hsp92II CATG 7 cut(s) 132, 182, 283, 389, 560, 695, 851
KpnI GGTACC 3 cut(s) 102, 117, 529
Ksp22I TGATCA 2 cut(s) 10, 478
Kzo9I GATC 9 cut(s) 10, 349, 478, 498, 514, 838, 976, 1037, 1097
LmnI GCTCC 3 cut(s) 541, 995, 1125
Lsp1109I GCAGC 3 cut(s) 391, 913, 935
MaeI CTAG 4 cut(s) 545, 630, 711, 716
MaeII ACGT 1 cut(s) 341
MaeIII GTNAC 3 cut(s) 181, 314, 732
MalI GATC 9 cut(s) 12, 351, 480, 500, 516, 840, 978, 1039, 1099
MboI GATC 9 cut(s) 10, 349, 478, 498, 514, 838, 976, 1037, 1097
MboII GAAGA 9 cut(s) 145, 146, 148, 221, 251, 469, 524, 553, 1032
MflI RGATCY 3 cut(s) 349, 514, 1037
MhlI GDGCHC 2 cut(s) 77, 1130
MlsI TGGCCA 1 cut(s) 972
MluCI AATT 3 cut(s) 474, 605, 1032
MluNI TGGCCA 1 cut(s) 972
MlyI GAGTC 2 cut(s) 374, 677
MmeI TCCRAC 2 cut(s) 828, 845
Mox20I TGGCCA 1 cut(s) 972
MroXI GAANNNNTTC 1 cut(s) 552
MscI TGGCCA 1 cut(s) 972
MseI TTAA 2 cut(s) 69, 885
MslI CAYNNNNRTG 1 cut(s) 591
Msp20I TGGCCA 1 cut(s) 972
MspA1I CMGCKG 1 cut(s) 926
MspI CCGG 2 cut(s) 950, 1082
MspR9I CCNGG 2 cut(s) 1049, 1123
Mva1269I GAATGC 1 cut(s) 417
MvaI CCWGG 2 cut(s) 1049, 1123
MvnI CGCG 1 cut(s) 159
MwoI GCNNNNNNNGC 4 cut(s) 725, 831, 995, 1016
NdeI CATATG 1 cut(s) 1106
NdeII GATC 9 cut(s) 10, 349, 478, 498, 514, 838, 976, 1037, 1097
NlaIII CATG 7 cut(s) 132, 182, 283, 389, 560, 695, 851
NlaIV GGNNCC 5 cut(s) 100, 115, 201, 527, 1080
NmuCI GTSAC 3 cut(s) 181, 314, 732
NspI RCATGY 3 cut(s) 182, 695, 851
PagI TCATGA 1 cut(s) 385
PaqCI CACCTGC 2 cut(s) 745, 980
PciI ACATGT 1 cut(s) 178
PctI GAATGC 1 cut(s) 417
PdmI GAANNNNTTC 1 cut(s) 552
PfeI GAWTC 1 cut(s) 505
PkrI GCNGC 4 cut(s) 406, 925, 928, 1142
PleI GAGTC 2 cut(s) 373, 676
PpsI GAGTC 2 cut(s) 373, 676
PscI ACATGT 1 cut(s) 178
Psp124BI GAGCTC 1 cut(s) 77
Psp1406I AACGTT 1 cut(s) 341
Psp6I CCWGG 2 cut(s) 1047, 1121
PspGI CCWGG 2 cut(s) 1047, 1121
PspN4I GGNNCC 5 cut(s) 100, 115, 201, 527, 1080
PspPI GGNCC 2 cut(s) 940, 1079
PstI CTGCAG 1 cut(s) 409
PsuI RGATCY 3 cut(s) 349, 514, 1037
PvuII CAGCTG 1 cut(s) 926
RsaI GTAC 3 cut(s) 100, 115, 527
RsaNI GTAC 3 cut(s) 99, 114, 526
RseI CAYNNNNRTG 1 cut(s) 591
SacI GAGCTC 1 cut(s) 77
SaqAI TTAA 2 cut(s) 69, 885
SatI GCNGC 4 cut(s) 405, 924, 927, 1141
Sau3AI GATC 9 cut(s) 10, 349, 478, 498, 514, 838, 976, 1037, 1097
Sau96I GGNCC 2 cut(s) 940, 1079
SchI GAGTC 2 cut(s) 374, 677
ScrFI CCNGG 2 cut(s) 1049, 1123
SduI GDGCHC 2 cut(s) 77, 1130
SfcI CTRYAG 4 cut(s) 296, 405, 1005, 1014
SinI GGWCC 1 cut(s) 940
SmiMI CAYNNNNRTG 1 cut(s) 591
Sse9I AATT 3 cut(s) 474, 605, 1032
SsiI CCGC 5 cut(s) 159, 658, 791, 929, 1141
SspMI CTAG 4 cut(s) 545, 630, 711, 716
SstI GAGCTC 1 cut(s) 77
StyD4I CCNGG 2 cut(s) 1047, 1121
StyI CCWWGG 1 cut(s) 597
TaaI ACNGT 1 cut(s) 809
TaiI ACGT 1 cut(s) 344
TaqI TCGA 2 cut(s) 1024, 1152
TaqII GACCGA 1 cut(s) 1050
TasI AATT 3 cut(s) 474, 605, 1032
TauI GCSGC 1 cut(s) 1143
TfiI GAWTC 1 cut(s) 505
Tru1I TTAA 2 cut(s) 69, 885
Tru9I TTAA 2 cut(s) 69, 885
TscAI CASTG 5 cut(s) 115, 325, 438, 444, 598
TseFI GTSAC 3 cut(s) 181, 314, 732
TseI GCWGC 3 cut(s) 404, 923, 926
Tsp45I GTSAC 3 cut(s) 181, 314, 732
TspDTI ATGAA 4 cut(s) 374, 402, 545, 764
TspRI CASTG 5 cut(s) 115, 325, 438, 444, 598
VpaK11BI GGWCC 1 cut(s) 940
XceI RCATGY 3 cut(s) 182, 695, 851
XmnI GAANNNNTTC 1 cut(s) 552
XspI CTAG 4 cut(s) 545, 630, 711, 716
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.