Rmu_sc0004087.1_g000020

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004087.1
OG0000146
Physical Location & Seq
Reverse (-)
56930 .. 58856
1927 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004087.1_g000020.1.cds

Sequence Viewer

Length: 1005 bp
atggcggccagcctctgtgttgcagtgaagagtttggggtattgtttctcccatcgttgtctctcatccaagaacaactatattgtcttcttcttggacttcaacatcatcagaccagtcacttccatcatcagaccgcttccatcgatcagacaggcttcgtctccagaactagaccgccgtcgtattcgttggtcaagtctagtcaccttcttcctacaacagatccggcatcagaccagatcgttgttcattccccatcgagtccagtcggcttcgtcttccacccgaaaccgccgctgtcgtctctcatcaacccagatcggcatctctcttggttaccagcccagaatcatccctcttcctcgatttccagatcggcatcaacgttctctgtctagatcggcgccgattctttctgtccagatcggcgcctgcaaccaatctcaacccgaccttctacgacccggcctgagctacaaggtgacccgtgcaaccagtcgaacccgggttcctcgtgaagatgacattgaggcctatgctaagtgggaagatgatgatgggttagtaatgtctattttatttagagccatgactgatgatgtgctacagatggtagaggaatgtgaaacttctgagaatcaggaagatcttgtgtggtaccagaaggagaaggagctagaaagggttcatgtcttcctgagagggcttgatgagaagcatagcagtgccaagggagaattgctcagaatgacagaccctcctagtttgaacacagcttttacatacatcagtaaggatgagtctcagcaggaaagtgtcaaacatgcacaggttgaagtatctagcctagccattcaggccaagtcatctgcacctttccttcagcaacagagttcagccccacttcatcagcaaggttttccccaaggcttctctaaccgtcctcgtcctcaatgctcttattgcaaggatcttgggcatgttcgggaatctctcccatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotran_gag_2 Retrotran_gag_3 Retrotrans_gag

Protein Analysis

334

Amino Acids

38.13

Weight (kDa)

9.33

Isoelectric Point (pI)

66.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000146)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19561 FvH4_1g25371 FvH4_1g25961 FvH4_2g00352 FvH4_2g00861 FvH4_2g04952 FvH4_2g05413 FvH4_2g07531 FvH4_2g08961 FvH4_2g25141 FvH4_2g27292 FvH4_3g18164 FvH4_3g19921 FvH4_3g43870 FvH4_4g14441 FvH4_4g15581 FvH4_4g15582 FvH4_4g16890 FvH4_4g19782 FvH4_4g33444 FvH4_4g33921 FvH4_5g22281 FvH4_5g22282 FvH4_5g32571 FvH4_5g37451 FvH4_5g39631 FvH4_6g04721 FvH4_6g11661 FvH4_6g20571 FvH4_6g32791 FvH4_7g23184
prunus_persica Prupe.1G090900_v2.0.a1 Prupe.1G241200_v2.0.a1 Prupe.1G534100_v2.0.a1 Prupe.3G076700_v2.0.a1 Prupe.4G150800_v2.0.a1 Prupe.4G181800_v2.0.a1 Prupe.4G240900_v2.0.a1 Prupe.4G247600_v2.0.a1 Prupe.6G115900_v2.0.a1 Prupe.6G327500_v2.0.a1 Prupe.8G071700_v2.0.a1
pyrus_communis pycom06g11480 pycom10g08330 pycom15g04320 pycom15g04350 pycom15g12620 pycom2874g00060
rosa_chinensis RchiOBHm_Chr1g0317241 RchiOBHm_Chr1g0341801 RchiOBHm_Chr1g0341931 RchiOBHm_Chr1g0359621 RchiOBHm_Chr2g0113741 RchiOBHm_Chr2g0117261 RchiOBHm_Chr2g0138831 RchiOBHm_Chr2g0141421 RchiOBHm_Chr2g0145281 RchiOBHm_Chr2g0152991 RchiOBHm_Chr3g0448001 RchiOBHm_Chr3g0450981 RchiOBHm_Chr3g0455161 RchiOBHm_Chr3g0457401 RchiOBHm_Chr3g0460001 RchiOBHm_Chr4g0387431 RchiOBHm_Chr4g0388741 RchiOBHm_Chr4g0444201 RchiOBHm_Chr4g0444261 RchiOBHm_Chr5g0010221 RchiOBHm_Chr6g0271721 RchiOBHm_Chr6g0274641 RchiOBHm_Chr6g0294691 RchiOBHm_Chr7g0237031 RchiOBHm_Chr7g0238461 RchiOBHm_Chr7g0239981
rosa_laevigata RLG00000009017
rosa_multiflora Rmu_co7986768.1_g000001 Rmu_co8302239.1_g000001 Rmu_co8485799.1_g000001 Rmu_sc0000061.1_g000013 Rmu_sc0000303.1_g000034 Rmu_sc0000303.1_g000035 Rmu_sc0000315.1_g000017 Rmu_sc0000349.1_g000003 Rmu_sc0000498.1_g000068 Rmu_sc0000508.1_g000014 Rmu_sc0000602.1_g000001 Rmu_sc0000633.1_g000002 Rmu_sc0000638.1_g000030 Rmu_sc0000756.1_g000016 Rmu_sc0000756.1_g000017 Rmu_sc0000785.1_g000037 Rmu_sc0000795.1_g000017 Rmu_sc0000796.1_g000030 Rmu_sc0000863.1_g000023 Rmu_sc0000920.1_g000021 Rmu_sc0000960.1_g000015 Rmu_sc0000982.1_g000102 Rmu_sc0001036.1_g000008 Rmu_sc0001036.1_g000009 Rmu_sc0001643.1_g000029 Rmu_sc0001687.1_g000026 Rmu_sc0001708.1_g000037 Rmu_sc0001768.1_g000015 Rmu_sc0001790.1_g000022 Rmu_sc0002180.1_g000007 Rmu_sc0002211.1_g000006 Rmu_sc0002270.1_g000010 Rmu_sc0002404.1_g000031 Rmu_sc0002858.1_g000016 Rmu_sc0003063.1_g000028 Rmu_sc0003730.1_g000017 Rmu_sc0004087.1_g000020 Rmu_sc0004618.1_g000048 Rmu_sc0004724.1_g000005 Rmu_sc0005167.1_g000036 Rmu_sc0005781.1_g000003 Rmu_sc0005878.1_g000012 Rmu_sc0006011.1_g000003 Rmu_sc0006343.1_g000011 Rmu_sc0006573.1_g000007 Rmu_sc0006599.1_g000007 Rmu_sc0006803.1_g000014 Rmu_sc0006836.1_g000002 Rmu_sc0006849.1_g000002 Rmu_sc0007109.1_g000009 Rmu_sc0009268.1_g000016 Rmu_sc0009618.1_g000017 Rmu_sc0009674.1_g000009 Rmu_sc0010244.1_g000009 Rmu_sc0011151.1_g000004 Rmu_sc0011356.1_g000001 Rmu_sc0011674.1_g000002 Rmu_sc0011778.1_g000016 Rmu_sc0012342.1_g000001 Rmu_sc0012467.1_g000002 Rmu_sc0012574.1_g000003 Rmu_sc0012913.1_g000005 Rmu_sc0013612.1_g000020 Rmu_sc0014824.1_g000001 Rmu_sc0017869.1_g000002 Rmu_sc0018085.1_g000003 Rmu_sc0024789.1_g000001 Rmu_sc0025106.1_g000013 Rmu_sc0034502.1_g000001 Rmu_sc0034547.1_g000001 Rmu_sc0035094.1_g000001 Rmu_sc0035095.1_g000001 Rmu_ssc0000100.1_g000027 Rmu_ssc0000244.1_g000005 Rmu_ssc0000371.1_g000029 Rmu_ssc0000381.1_g000004
rosa_roxburghii Rroxscaffold_1G00015480 Rroxscaffold_1G00023580 Rroxscaffold_1G00039340 Rroxscaffold_1G00047080 Rroxscaffold_2G00095820 Rroxscaffold_2G00125200 Rroxscaffold_2G00128330 Rroxscaffold_3G00270860
rosa_rugosa Rorug06G0120700
rosa_samantha Rh3BG173100 Rh6AG089600 Rh7AG488100 Rh7DG389600
rosa_wichuraiana Rw0G001150 Rw0G001990 Rw0G002010 Rw0G019540 Rw1G013730 Rw1G024110 Rw1G029190 Rw2G018850 Rw2G021090 Rw2G022260 Rw2G023180 Rw2G027280 Rw3G010190 Rw3G020660 Rw3G029380 Rw4G002390 Rw4G002690 Rw4G033260 Rw5G011960 Rw5G023110 Rw5G025250 Rw5G028950 Rw5G033740 Rw5G033950 Rw5G037900 Rw6G009640 Rw6G011620 Rw6G027720 Rw7G010680 Rw7G042070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 660
AccB1I GGYRCC 3 cut(s) 406, 431, 660
AciI CCGC 5 cut(s) 5, 137, 178, 295, 298
AclI AACGTT 1 cut(s) 388
AclWI GGATC 2 cut(s) 220, 981
AcoI YGGCCR 1 cut(s) 6
AcuI CTGAAG 1 cut(s) 869
AcyI GRCGYC 2 cut(s) 407, 432
AfaI GTAC 1 cut(s) 662
AgsI TTSAA 3 cut(s) 103, 772, 839
AloI GAACNNNNNNTCC 2 cut(s) 496, 528
AluBI AGCT 3 cut(s) 477, 679, 779
AluI AGCT 3 cut(s) 477, 679, 779
Alw26I GTCTC 4 cut(s) 65, 168, 311, 810
AlwI GGATC 2 cut(s) 220, 981
AlwNI CAGNNNCTG 1 cut(s) 15
Ama87I CYCGRG 1 cut(s) 507
AoxI GGCC 4 cut(s) 6, 469, 534, 861
Asp700I GAANNNNTTC 1 cut(s) 687
Asp718I GGTACC 1 cut(s) 660
AspLEI GCGC 2 cut(s) 409, 434
AsuC2I CCSGG 3 cut(s) 468, 508, 509
AsuHPI GGTGA 2 cut(s) 199, 496
AvaI CYCGRG 1 cut(s) 507
BanI GGYRCC 3 cut(s) 406, 431, 660
BauI CACGAG 1 cut(s) 516
BbsI GAAGAC 3 cut(s) 79, 273, 688
BccI CCATC 6 cut(s) 60, 134, 151, 267, 554, 607
BceAI ACGGC 1 cut(s) 165
BcnI CCSGG 3 cut(s) 468, 508, 509
BcoDI GTCTC 4 cut(s) 65, 168, 311, 810
BfaI CTAG 7 cut(s) 173, 203, 399, 680, 765, 846, 851
BfmI CTRYAG 1 cut(s) 608
BfoI RGCGCY 2 cut(s) 410, 435
BglI GCCNNNNNGGC 1 cut(s) 860
BglII AGATCT 1 cut(s) 649
BisI GCNGC 2 cut(s) 6, 298
BlsI GCNGC 2 cut(s) 7, 299
Bme1390I CCNGG 3 cut(s) 468, 508, 509
BmeT110I CYCGRG 1 cut(s) 507
BmiI GGNNCC 4 cut(s) 408, 433, 513, 662
BmrFI CCNGG 3 cut(s) 468, 508, 509
BmsI GCATC 3 cut(s) 241, 336, 391
BoxI GACNNNNGTC 1 cut(s) 180
BpiI GAAGAC 3 cut(s) 79, 273, 688
BplI GAGNNNNNCTC 2 cut(s) 729, 761
BpmI CTGGAG 1 cut(s) 150
Bpu10I CCTNAGC 1 cut(s) 473
BpuMI CCSGG 3 cut(s) 468, 508, 509
Bsa29I ATCGAT 1 cut(s) 146
BsaBI GATNNNNATC 2 cut(s) 326, 381
BsaHI GRCGYC 2 cut(s) 407, 432
BsaJI CCNNGG 3 cut(s) 507, 732, 928
BsaXI ACNNNNNCTCC 2 cut(s) 745, 775
Bse1I ACTGG 3 cut(s) 116, 268, 498
Bse8I GATNNNNATC 2 cut(s) 326, 381
BseCI ATCGAT 1 cut(s) 146
BseDI CCNNGG 3 cut(s) 507, 732, 928
BseGI GGATG 3 cut(s) 65, 354, 805
BseJI GATNNNNATC 2 cut(s) 326, 381
BseMII CTCAG 5 cut(s) 464, 627, 692, 760, 821
BseNI ACTGG 3 cut(s) 116, 268, 498
BsgI GTGCAG 1 cut(s) 858
BshFI GGCC 4 cut(s) 8, 471, 536, 863
BshNI GGYRCC 3 cut(s) 406, 431, 660
BshVI ATCGAT 1 cut(s) 146
BsiHKCI CYCGRG 1 cut(s) 507
BsiSI CCGG 3 cut(s) 229, 468, 508
BsmAI GTCTC 4 cut(s) 65, 168, 311, 810
BsmBI CGTCTC 2 cut(s) 168, 311
BsnI GGCC 4 cut(s) 8, 471, 536, 863
BsoBI CYCGRG 1 cut(s) 507
Bsp143I GATC 9 cut(s) 147, 225, 242, 321, 376, 401, 426, 649, 973
BspACI CCGC 5 cut(s) 5, 137, 178, 295, 298
BspANI GGCC 4 cut(s) 8, 471, 536, 863
BspCNI CTCAG 5 cut(s) 465, 628, 693, 759, 820
BspDI ATCGAT 1 cut(s) 146
BspLI GGNNCC 4 cut(s) 408, 433, 513, 662
BspPI GGATC 2 cut(s) 220, 981
BspT107I GGYRCC 3 cut(s) 406, 431, 660
BsrI ACTGG 3 cut(s) 116, 268, 498
BssECI CCNNGG 3 cut(s) 507, 732, 928
BssMI GATC 9 cut(s) 147, 225, 242, 321, 376, 401, 426, 649, 973
BssNI GRCGYC 2 cut(s) 407, 432
BssSI CACGAG 1 cut(s) 516
BssT1I CCWWGG 2 cut(s) 732, 928
Bst2BI CACGAG 1 cut(s) 516
Bst4CI ACNGT 1 cut(s) 944
Bst6I CTCTTC 2 cut(s) 23, 366
BstACI GRCGYC 2 cut(s) 407, 432
BstC8I GCNNGC 2 cut(s) 10, 436
BstDEI CTNAG 6 cut(s) 473, 543, 636, 701, 746, 807
BstEII GGTNACC 2 cut(s) 338, 484
BstF5I GGATG 3 cut(s) 65, 354, 805
BstH2I RGCGCY 2 cut(s) 410, 435
BstHHI GCGC 2 cut(s) 409, 434
BstKTI GATC 9 cut(s) 150, 228, 245, 324, 379, 404, 429, 652, 976
BstMAI GTCTC 4 cut(s) 65, 168, 311, 810
BstMBI GATC 9 cut(s) 147, 225, 242, 321, 376, 401, 426, 649, 973
BstMWI GCNNNNNNNGC 2 cut(s) 860, 966
BstNSI RCATGY 2 cut(s) 830, 986
BstPAI GACNNNNGTC 1 cut(s) 180
BstPI GGTNACC 2 cut(s) 338, 484
BstSCI CCNGG 3 cut(s) 466, 506, 507
BstSFI CTRYAG 1 cut(s) 608
BstV2I GAAGAC 3 cut(s) 79, 273, 688
BstX2I RGATCY 3 cut(s) 225, 649, 973
BstYI RGATCY 3 cut(s) 225, 649, 973
Bsu15I ATCGAT 1 cut(s) 146
BsuRI GGCC 4 cut(s) 8, 471, 536, 863
BsuTUI ATCGAT 1 cut(s) 146
BtsCI GGATG 3 cut(s) 65, 354, 805
BtsI GCAGTG 2 cut(s) 30, 733
BtsIMutI CAGTG 2 cut(s) 30, 733
Cac8I GCNNGC 2 cut(s) 10, 436
CaiI CAGNNNCTG 1 cut(s) 15
CfoI GCGC 2 cut(s) 409, 434
Cfr9I CCCGGG 1 cut(s) 507
ClaI ATCGAT 1 cut(s) 146
Csp6I GTAC 1 cut(s) 661
CviAII CATG 4 cut(s) 592, 692, 827, 983
CviQI GTAC 1 cut(s) 661
DdeI CTNAG 6 cut(s) 473, 543, 636, 701, 746, 807
DinI GGCGCC 2 cut(s) 408, 433
DpnI GATC 9 cut(s) 149, 227, 244, 323, 378, 403, 428, 651, 975
DpnII GATC 9 cut(s) 147, 225, 242, 321, 376, 401, 426, 649, 973
EaeI YGGCCR 1 cut(s) 6
Eam1104I CTCTTC 2 cut(s) 23, 366
EarI CTCTTC 2 cut(s) 23, 366
Eco130I CCWWGG 2 cut(s) 732, 928
Eco147I AGGCCT 1 cut(s) 536
Eco57I CTGAAG 1 cut(s) 869
Eco88I CYCGRG 1 cut(s) 507
Eco91I GGTNACC 2 cut(s) 338, 484
EcoO65I GGTNACC 2 cut(s) 338, 484
EcoT14I CCWWGG 2 cut(s) 732, 928
EgeI GGCGCC 2 cut(s) 408, 433
EheI GGCGCC 2 cut(s) 408, 433
ErhI CCWWGG 2 cut(s) 732, 928
Esp3I CGTCTC 2 cut(s) 168, 311
FaeI CATG 4 cut(s) 595, 695, 830, 986
FaiI YATR 9 cut(s) 81, 540, 593, 693, 723, 787, 828, 984, 1003
FatI CATG 4 cut(s) 591, 691, 826, 982
Fnu4HI GCNGC 2 cut(s) 6, 298
FokI GGATG 3 cut(s) 52, 341, 812
Fsp4HI GCNGC 2 cut(s) 6, 298
FspBI CTAG 7 cut(s) 173, 203, 399, 680, 765, 846, 851
GlaI GCGC 2 cut(s) 408, 433
GluI GCNGC 2 cut(s) 6, 298
GsuI CTGGAG 1 cut(s) 150
HaeII RGCGCY 2 cut(s) 410, 435
HaeIII GGCC 4 cut(s) 8, 471, 536, 863
HapII CCGG 3 cut(s) 229, 468, 508
HhaI GCGC 2 cut(s) 409, 434
Hin1I GRCGYC 2 cut(s) 407, 432
Hin1II CATG 4 cut(s) 595, 695, 830, 986
Hin6I GCGC 2 cut(s) 407, 432
HinP1I GCGC 2 cut(s) 407, 432
HinfI GANTC 6 cut(s) 264, 351, 412, 640, 803, 992
HpaII CCGG 3 cut(s) 229, 468, 508
HphI GGTGA 2 cut(s) 199, 496
Hpy188I TCNGA 6 cut(s) 113, 134, 152, 237, 637, 749
Hpy188III TCNNGA 8 cut(s) 167, 374, 399, 424, 518, 644, 700, 989
Hpy99I CGWCG 1 cut(s) 186
HpyAV CCTTC 5 cut(s) 220, 467, 661, 667, 893
HpyCH4III ACNGT 1 cut(s) 944
HpyCH4IV ACGT 1 cut(s) 388
HpyCH4V TGCA 6 cut(s) 23, 438, 494, 830, 875, 969
HpyF10VI GCNNNNNNNGC 2 cut(s) 860, 966
HpyF3I CTNAG 6 cut(s) 473, 543, 636, 701, 746, 807
HpySE526I ACGT 1 cut(s) 388
Hsp92I GRCGYC 2 cut(s) 407, 432
Hsp92II CATG 4 cut(s) 595, 695, 830, 986
HspAI GCGC 2 cut(s) 407, 432
KasI GGCGCC 2 cut(s) 406, 431
KpnI GGTACC 1 cut(s) 664
Kzo9I GATC 9 cut(s) 147, 225, 242, 321, 376, 401, 426, 649, 973
LmnI GCTCC 1 cut(s) 676
LweI GCATC 3 cut(s) 241, 336, 391
MaeI CTAG 7 cut(s) 173, 203, 399, 680, 765, 846, 851
MaeII ACGT 1 cut(s) 388
MaeIII GTNAC 4 cut(s) 118, 205, 338, 484
MalI GATC 9 cut(s) 149, 227, 244, 323, 378, 403, 428, 651, 975
MboI GATC 9 cut(s) 147, 225, 242, 321, 376, 401, 426, 649, 973
MflI RGATCY 3 cut(s) 225, 649, 973
MluCI AATT 1 cut(s) 740
Mly113I GGCGCC 2 cut(s) 407, 432
MlyI GAGTC 2 cut(s) 273, 812
MroXI GAANNNNTTC 1 cut(s) 687
MslI CAYNNNNRTG 1 cut(s) 726
MspA1I CMGCKG 1 cut(s) 300
MspI CCGG 3 cut(s) 229, 468, 508
MspR9I CCNGG 3 cut(s) 468, 508, 509
MwoI GCNNNNNNNGC 2 cut(s) 860, 966
NarI GGCGCC 2 cut(s) 407, 432
NciI CCSGG 3 cut(s) 468, 508, 509
NdeII GATC 9 cut(s) 147, 225, 242, 321, 376, 401, 426, 649, 973
NlaIII CATG 4 cut(s) 595, 695, 830, 986
NlaIV GGNNCC 4 cut(s) 408, 433, 513, 662
NmuCI GTSAC 3 cut(s) 118, 205, 484
NspI RCATGY 2 cut(s) 830, 986
PceI AGGCCT 1 cut(s) 536
PcsI WCGNNNNNNNCGW 1 cut(s) 385
PdmI GAANNNNTTC 1 cut(s) 687
PfeI GAWTC 4 cut(s) 351, 412, 640, 992
PkrI GCNGC 2 cut(s) 7, 299
PleI GAGTC 2 cut(s) 272, 811
PluTI GGCGCC 2 cut(s) 410, 435
PpsI GAGTC 2 cut(s) 272, 811
PshAI GACNNNNGTC 1 cut(s) 180
Psp1406I AACGTT 1 cut(s) 388
PspEI GGTNACC 2 cut(s) 338, 484
PspN4I GGNNCC 4 cut(s) 408, 433, 513, 662
PstNI CAGNNNCTG 1 cut(s) 15
PsuI RGATCY 3 cut(s) 225, 649, 973
RsaI GTAC 1 cut(s) 662
RsaNI GTAC 1 cut(s) 661
RseI CAYNNNNRTG 1 cut(s) 726
SatI GCNGC 2 cut(s) 6, 298
Sau3AI GATC 9 cut(s) 147, 225, 242, 321, 376, 401, 426, 649, 973
SchI GAGTC 2 cut(s) 273, 812
ScrFI CCNGG 3 cut(s) 468, 508, 509
SfaNI GCATC 3 cut(s) 241, 336, 391
SfcI CTRYAG 1 cut(s) 608
SfoI GGCGCC 2 cut(s) 408, 433
SmaI CCCGGG 1 cut(s) 509
SmiMI CAYNNNNRTG 1 cut(s) 726
Sse9I AATT 1 cut(s) 740
SseBI AGGCCT 1 cut(s) 536
SsiI CCGC 5 cut(s) 5, 137, 178, 295, 298
SspDI GGCGCC 2 cut(s) 406, 431
SspMI CTAG 7 cut(s) 173, 203, 399, 680, 765, 846, 851
StuI AGGCCT 1 cut(s) 536
StyD4I CCNGG 3 cut(s) 466, 506, 507
StyI CCWWGG 2 cut(s) 732, 928
TaaI ACNGT 1 cut(s) 944
TaiI ACGT 1 cut(s) 391
TaqI TCGA 4 cut(s) 146, 262, 367, 502
TasI AATT 1 cut(s) 740
TauI GCSGC 2 cut(s) 8, 300
TfiI GAWTC 4 cut(s) 351, 412, 640, 992
TscAI CASTG 2 cut(s) 30, 733
TseFI GTSAC 3 cut(s) 118, 205, 484
Tsp45I GTSAC 3 cut(s) 118, 205, 484
TspDTI ATGAA 3 cut(s) 241, 680, 899
TspMI CCCGGG 1 cut(s) 507
TspRI CASTG 2 cut(s) 30, 733
XbaI TCTAGA 1 cut(s) 398
XceI RCATGY 2 cut(s) 830, 986
XmaI CCCGGG 1 cut(s) 507
XmnI GAANNNNTTC 1 cut(s) 687
XspI CTAG 7 cut(s) 173, 203, 399, 680, 765, 846, 851
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.