Rw5G011960

beta-galactosidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000146
Physical Location & Seq
Reverse (-)
13914208 .. 13915844
1637 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G011960.1

Sequence Viewer

Length: 1317 bp
ATGTCTATTTTATTTAGAGCCATGACTGACGATGTGCTACAGATGGAAGAGGAATGTGAAACTGCTAAGGCAATATGGAAGACGTTGGGAGATCTCTATACAAATGAATCTGATTTTATACAGGTTCATGAACTGATGTGCAAAGCTGCAGGAATGCAACAGAATGGGCAACCAGTGTCAGTGTTTTTCACCAAATTGAAGAATGTATGGGCTGAAATTGATCAGAAGCGTCCTTGCCAGATCAAGAATCAGGAAGATCTTGTGTGGTACCAGAAGGAGAAGGAGCTAGAAAGAGTTCATGTCTTCTTGAGAGGGCTTGATGAGAAGCATAGCAGTGCCAAGGGAGAATTGCTCAGAATGACAGACCCTCCTAGTTTGAACACAGCTTTTACATACATCCGCAAGGATGAGTCTCAGCAGGAAAGTGTCAAACATGCACAGGTTGAAGTATCTAGCCTAGCCATTCAGGCCAAGTCACCTGCACCTTTCCTTCAGCAACAGAGTTCAGCCCCACTTCATCAGCAAGTTTTTCCGCAAGGCTTCTCCAACCATCCTCGTCCTCAATGCTCTTATTGCAACGATCTTGGGCATGTTCGGGAGACTTGTTGGAAGTTGAACCCACACCTTAAATCTAAAAAACAAGGTTATCACCTTAAGGGGAAAGCAGCTGCAGTTCACTTGGTCCAAGAACTAGATTTCTATGGAGTGGCTGGCCAAGATCATCATACAGCAGGTGGAGCTACCCCTACAGCCTCTATAGCAGGTCGAGGATCTTCTCACCAGGGAGATAGTCGGTCGGGGTATTTGAGGGGCAGGTTGTTCCATCTGGATCAGACATACGCAGGAGAGAAACTAGGAGCACAGTCCCGAGCCGCTTTGACTTCGACTTCTGATAAGCTAAGTGAGATTTGGTTGTGGCATCGCCGTTTAGGGCATCCATCTTTTAGTCTTATGAAGAAAACCATGCCTACTCTGTTTATTGGTGTGGATGAGTCAGTTTTACATTGTGAAACATGTGTTTTAGCCAAGAGTCATCGTGCTACTTATTCTCCTAGTATTTCTAATAAAAGTATTATTCCTTTTGAGTTGATTCATTCTGATGTTTGGGGTTCTTCTAGAGAGCCTACTGTATCGAGTATGCGATATTTCGTGTTGTTTATTGATGATTGTACAAGATTGTCATGGGTTGCTCTTCTTAAAACCAAAAATGAAGTCTTCCCCGCTTTTCAAACCTTTCGTAATTTTGTTCAGACACAATATCAAAGCACCATTAAAGTCCTTCGTTCTGACAATGGGGGGGGGGGGGGAGTATGTTAA

Protein Analysis

438

Amino Acids

49.32

Weight (kDa)

8.56

Isoelectric Point (pI)

44.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
gag_pre-integrs PF13976 288 - 344 3.1e-15 GAG-pre-integrase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000146)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19561 FvH4_1g25371 FvH4_1g25961 FvH4_2g00352 FvH4_2g00861 FvH4_2g04952 FvH4_2g05413 FvH4_2g07531 FvH4_2g08961 FvH4_2g25141 FvH4_2g27292 FvH4_3g18164 FvH4_3g19921 FvH4_3g43870 FvH4_4g14441 FvH4_4g15581 FvH4_4g15582 FvH4_4g16890 FvH4_4g19782 FvH4_4g33444 FvH4_4g33921 FvH4_5g22281 FvH4_5g22282 FvH4_5g32571 FvH4_5g37451 FvH4_5g39631 FvH4_6g04721 FvH4_6g11661 FvH4_6g20571 FvH4_6g32791 FvH4_7g23184
prunus_persica Prupe.1G090900_v2.0.a1 Prupe.1G241200_v2.0.a1 Prupe.1G534100_v2.0.a1 Prupe.3G076700_v2.0.a1 Prupe.4G150800_v2.0.a1 Prupe.4G181800_v2.0.a1 Prupe.4G240900_v2.0.a1 Prupe.4G247600_v2.0.a1 Prupe.6G115900_v2.0.a1 Prupe.6G327500_v2.0.a1 Prupe.8G071700_v2.0.a1
pyrus_communis pycom06g11480 pycom10g08330 pycom15g04320 pycom15g04350 pycom15g12620 pycom2874g00060
rosa_chinensis RchiOBHm_Chr1g0317241 RchiOBHm_Chr1g0341801 RchiOBHm_Chr1g0341931 RchiOBHm_Chr1g0359621 RchiOBHm_Chr2g0113741 RchiOBHm_Chr2g0117261 RchiOBHm_Chr2g0138831 RchiOBHm_Chr2g0141421 RchiOBHm_Chr2g0145281 RchiOBHm_Chr2g0152991 RchiOBHm_Chr3g0448001 RchiOBHm_Chr3g0450981 RchiOBHm_Chr3g0455161 RchiOBHm_Chr3g0457401 RchiOBHm_Chr3g0460001 RchiOBHm_Chr4g0387431 RchiOBHm_Chr4g0388741 RchiOBHm_Chr4g0444201 RchiOBHm_Chr4g0444261 RchiOBHm_Chr5g0010221 RchiOBHm_Chr6g0271721 RchiOBHm_Chr6g0274641 RchiOBHm_Chr6g0294691 RchiOBHm_Chr7g0237031 RchiOBHm_Chr7g0238461 RchiOBHm_Chr7g0239981
rosa_laevigata RLG00000009017
rosa_multiflora Rmu_co7986768.1_g000001 Rmu_co8302239.1_g000001 Rmu_co8485799.1_g000001 Rmu_sc0000061.1_g000013 Rmu_sc0000303.1_g000034 Rmu_sc0000303.1_g000035 Rmu_sc0000315.1_g000017 Rmu_sc0000349.1_g000003 Rmu_sc0000498.1_g000068 Rmu_sc0000508.1_g000014 Rmu_sc0000602.1_g000001 Rmu_sc0000633.1_g000002 Rmu_sc0000638.1_g000030 Rmu_sc0000756.1_g000016 Rmu_sc0000756.1_g000017 Rmu_sc0000785.1_g000037 Rmu_sc0000795.1_g000017 Rmu_sc0000796.1_g000030 Rmu_sc0000863.1_g000023 Rmu_sc0000920.1_g000021 Rmu_sc0000960.1_g000015 Rmu_sc0000982.1_g000102 Rmu_sc0001036.1_g000008 Rmu_sc0001036.1_g000009 Rmu_sc0001643.1_g000029 Rmu_sc0001687.1_g000026 Rmu_sc0001708.1_g000037 Rmu_sc0001768.1_g000015 Rmu_sc0001790.1_g000022 Rmu_sc0002180.1_g000007 Rmu_sc0002211.1_g000006 Rmu_sc0002270.1_g000010 Rmu_sc0002404.1_g000031 Rmu_sc0002858.1_g000016 Rmu_sc0003063.1_g000028 Rmu_sc0003730.1_g000017 Rmu_sc0004087.1_g000020 Rmu_sc0004618.1_g000048 Rmu_sc0004724.1_g000005 Rmu_sc0005167.1_g000036 Rmu_sc0005781.1_g000003 Rmu_sc0005878.1_g000012 Rmu_sc0006011.1_g000003 Rmu_sc0006343.1_g000011 Rmu_sc0006573.1_g000007 Rmu_sc0006599.1_g000007 Rmu_sc0006803.1_g000014 Rmu_sc0006836.1_g000002 Rmu_sc0006849.1_g000002 Rmu_sc0007109.1_g000009 Rmu_sc0009268.1_g000016 Rmu_sc0009618.1_g000017 Rmu_sc0009674.1_g000009 Rmu_sc0010244.1_g000009 Rmu_sc0011151.1_g000004 Rmu_sc0011356.1_g000001 Rmu_sc0011674.1_g000002 Rmu_sc0011778.1_g000016 Rmu_sc0012342.1_g000001 Rmu_sc0012467.1_g000002 Rmu_sc0012574.1_g000003 Rmu_sc0012913.1_g000005 Rmu_sc0013612.1_g000020 Rmu_sc0014824.1_g000001 Rmu_sc0017869.1_g000002 Rmu_sc0018085.1_g000003 Rmu_sc0024789.1_g000001 Rmu_sc0025106.1_g000013 Rmu_sc0034502.1_g000001 Rmu_sc0034547.1_g000001 Rmu_sc0035094.1_g000001 Rmu_sc0035095.1_g000001 Rmu_ssc0000100.1_g000027 Rmu_ssc0000244.1_g000005 Rmu_ssc0000371.1_g000029 Rmu_ssc0000381.1_g000004
rosa_roxburghii Rroxscaffold_1G00015480 Rroxscaffold_1G00023580 Rroxscaffold_1G00039340 Rroxscaffold_1G00047080 Rroxscaffold_2G00095820 Rroxscaffold_2G00125200 Rroxscaffold_2G00128330 Rroxscaffold_3G00270860
rosa_rugosa Rorug06G0120700
rosa_samantha Rh3BG173100 Rh6AG089600 Rh7AG488100 Rh7DG389600
rosa_wichuraiana Rw0G001150 Rw0G001990 Rw0G002010 Rw0G019540 Rw1G013730 Rw1G024110 Rw1G029190 Rw2G018850 Rw2G021090 Rw2G022260 Rw2G023180 Rw2G027280 Rw3G010190 Rw3G020660 Rw3G029380 Rw4G002390 Rw4G002690 Rw4G033260 Rw5G011960 Rw5G023110 Rw5G025250 Rw5G028950 Rw5G033740 Rw5G033950 Rw5G037900 Rw6G009640 Rw6G011620 Rw6G027720 Rw7G010680 Rw7G042070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 487, 722
Acc36I ACCTGC 4 cut(s) 487, 722, 752, 804
Acc65I GGTACC 1 cut(s) 267
AccB1I GGYRCC 1 cut(s) 267
AciI CCGC 4 cut(s) 400, 533, 873, 1221
AclWI GGATC 2 cut(s) 778, 837
AcoI YGGCCR 1 cut(s) 712
AcuI CTGAAG 1 cut(s) 476
AfaI GTAC 2 cut(s) 269, 1171
AflII CTTAAG 1 cut(s) 653
AflIII ACRYGT 1 cut(s) 1013
AgsI TTSAA 5 cut(s) 199, 379, 446, 616, 1229
AjnI CCWGG 1 cut(s) 780
AluBI AGCT 6 cut(s) 146, 286, 386, 668, 740, 898
AluI AGCT 6 cut(s) 146, 286, 386, 668, 740, 898
Alw21I GWGCWC 1 cut(s) 862
Alw26I GTCTC 2 cut(s) 417, 593
AlwI GGATC 2 cut(s) 778, 837
Ama87I CYCGRG 1 cut(s) 867
AoxI GGCC 2 cut(s) 468, 712
ApeKI GCWGC 3 cut(s) 146, 665, 668
ArsI GACNNNNNNTTYG 2 cut(s) 1197, 1229
Asp700I GAANNNNTTC 1 cut(s) 294
Asp718I GGTACC 1 cut(s) 267
AspS9I GGNCC 1 cut(s) 682
AsuHPI GGTGA 4 cut(s) 181, 468, 641, 770
AvaI CYCGRG 1 cut(s) 867
AvaII GGWCC 1 cut(s) 682
BalI TGGCCA 1 cut(s) 714
BanI GGYRCC 1 cut(s) 267
BbsI GAAGAC 3 cut(s) 86, 295, 1207
Bbv12I GWGCWC 1 cut(s) 862
BbvI GCAGC 3 cut(s) 133, 655, 677
BccI CCATC 4 cut(s) 37, 558, 831, 946
BceAI ACGGC 1 cut(s) 909
BciT130I CCWGG 1 cut(s) 782
BclI TGATCA 1 cut(s) 220
BcoDI GTCTC 2 cut(s) 417, 593
BfaI CTAG 8 cut(s) 287, 372, 453, 458, 692, 854, 1053, 1116
BfmI CTRYAG 5 cut(s) 38, 147, 669, 747, 756
BfrI CTTAAG 1 cut(s) 653
BfuAI ACCTGC 4 cut(s) 487, 722, 752, 804
BglI GCCNNNNNGGC 1 cut(s) 467
BglII AGATCT 2 cut(s) 91, 256
BisI GCNGC 4 cut(s) 147, 666, 669, 873
BlsI GCNGC 4 cut(s) 148, 667, 670, 874
Bme1390I CCNGG 1 cut(s) 782
Bme18I GGWCC 1 cut(s) 682
BmeT110I CYCGRG 1 cut(s) 867
BmgT120I GGNCC 1 cut(s) 682
BmiI GGNNCC 1 cut(s) 269
BmrFI CCNGG 1 cut(s) 782
BmsI GCATC 2 cut(s) 928, 943
BpiI GAAGAC 3 cut(s) 86, 295, 1207
BplI GAGNNNNNCTC 2 cut(s) 336, 368
Bpu10I CCTNAGC 1 cut(s) 66
BpuEI CTTGAG 1 cut(s) 328
BsaJI CCNNGG 2 cut(s) 339, 781
BsaXI ACNNNNNCTCC 4 cut(s) 352, 382, 1033, 1063
Bse1I ACTGG 1 cut(s) 173
BseBI CCWGG 1 cut(s) 782
BseDI CCNNGG 2 cut(s) 339, 781
BseGI GGATG 5 cut(s) 396, 412, 550, 934, 994
BseMII CTCAG 2 cut(s) 367, 428
BseNI ACTGG 1 cut(s) 173
BseXI GCAGC 3 cut(s) 133, 655, 677
BsgI GTGCAG 1 cut(s) 465
Bsh1285I CGRYCG 1 cut(s) 797
BshFI GGCC 2 cut(s) 470, 714
BshNI GGYRCC 1 cut(s) 267
BsiEI CGRYCG 1 cut(s) 797
BsiHKAI GWGCWC 1 cut(s) 862
BsiHKCI CYCGRG 1 cut(s) 867
BslFI GGGAC 1 cut(s) 850
BsmAI GTCTC 2 cut(s) 417, 593
BsmFI GGGAC 1 cut(s) 850
BsmI GAATGC 1 cut(s) 159
BsnI GGCC 2 cut(s) 470, 714
BsoBI CYCGRG 1 cut(s) 867
Bsp1286I GDGCHC 1 cut(s) 862
Bsp1407I TGTACA 1 cut(s) 1169
Bsp143I GATC 8 cut(s) 91, 220, 240, 256, 580, 718, 770, 829
BspACI CCGC 4 cut(s) 400, 533, 873, 1221
BspANI GGCC 2 cut(s) 470, 714
BspCNI CTCAG 2 cut(s) 366, 427
BspHI TCATGA 1 cut(s) 127
BspLI GGNNCC 1 cut(s) 269
BspMAI CTGCAG 2 cut(s) 151, 673
BspMI ACCTGC 4 cut(s) 487, 722, 752, 804
BspPI GGATC 2 cut(s) 778, 837
BspQI GCTCTTC 1 cut(s) 1197
BspT107I GGYRCC 1 cut(s) 267
BspTI CTTAAG 1 cut(s) 653
BsrGI TGTACA 1 cut(s) 1169
BsrI ACTGG 1 cut(s) 173
BssECI CCNNGG 2 cut(s) 339, 781
BssMI GATC 8 cut(s) 91, 220, 240, 256, 580, 718, 770, 829
BssT1I CCWWGG 1 cut(s) 339
Bst2UI CCWGG 1 cut(s) 782
Bst4CI ACNGT 2 cut(s) 864, 1129
Bst6I CTCTTC 2 cut(s) 42, 1197
BstAFI CTTAAG 1 cut(s) 653
BstAUI TGTACA 1 cut(s) 1169
BstC8I GCNNGC 1 cut(s) 712
BstDEI CTNAG 4 cut(s) 66, 353, 414, 899
BstF5I GGATG 5 cut(s) 396, 412, 550, 934, 994
BstKTI GATC 8 cut(s) 94, 223, 243, 259, 583, 721, 773, 832
BstMAI GTCTC 2 cut(s) 417, 593
BstMBI GATC 8 cut(s) 91, 220, 240, 256, 580, 718, 770, 829
BstMCI CGRYCG 1 cut(s) 797
BstMWI GCNNNNNNNGC 4 cut(s) 467, 573, 737, 758
BstNI CCWGG 1 cut(s) 782
BstNSI RCATGY 3 cut(s) 437, 593, 1017
BstSCI CCNGG 1 cut(s) 780
BstSFI CTRYAG 5 cut(s) 38, 147, 669, 747, 756
BstV1I GCAGC 3 cut(s) 133, 655, 677
BstV2I GAAGAC 3 cut(s) 86, 295, 1207
BstX2I RGATCY 3 cut(s) 91, 256, 770
BstYI RGATCY 3 cut(s) 91, 256, 770
BsuRI GGCC 2 cut(s) 470, 714
BtgZI GCGATG 1 cut(s) 905
BtsCI GGATG 5 cut(s) 396, 412, 550, 934, 994
BtsI GCAGTG 1 cut(s) 340
BtsIMutI CAGTG 3 cut(s) 180, 186, 340
BveI ACCTGC 4 cut(s) 487, 722, 752, 804
Cac8I GCNNGC 1 cut(s) 712
CciI TCATGA 1 cut(s) 127
Cfr13I GGNCC 1 cut(s) 682
CseI GACGC 1 cut(s) 218
Csp6I GTAC 2 cut(s) 268, 1170
CviAII CATG 8 cut(s) 22, 128, 299, 434, 590, 964, 1014, 1182
CviQI GTAC 2 cut(s) 268, 1170
DdeI CTNAG 4 cut(s) 66, 353, 414, 899
DpnI GATC 8 cut(s) 93, 222, 242, 258, 582, 720, 772, 831
DpnII GATC 8 cut(s) 91, 220, 240, 256, 580, 718, 770, 829
EaeI YGGCCR 1 cut(s) 712
Eam1104I CTCTTC 2 cut(s) 42, 1197
EarI CTCTTC 2 cut(s) 42, 1197
Eco130I CCWWGG 1 cut(s) 339
Eco47I GGWCC 1 cut(s) 682
Eco57I CTGAAG 1 cut(s) 476
Eco88I CYCGRG 1 cut(s) 867
EcoRII CCWGG 1 cut(s) 780
EcoT14I CCWWGG 1 cut(s) 339
ErhI CCWWGG 1 cut(s) 339
FaeI CATG 8 cut(s) 25, 131, 302, 437, 593, 967, 1017, 1185
FaqI GGGAC 1 cut(s) 850
FatI CATG 8 cut(s) 21, 127, 298, 433, 589, 963, 1013, 1181
FauI CCCGC 1 cut(s) 1228
FbaI TGATCA 1 cut(s) 220
Fnu4HI GCNGC 4 cut(s) 147, 666, 669, 873
FokI GGATG 5 cut(s) 383, 419, 537, 921, 1001
Fsp4HI GCNGC 4 cut(s) 147, 666, 669, 873
FspBI CTAG 8 cut(s) 287, 372, 453, 458, 692, 854, 1053, 1116
GluI GCNGC 4 cut(s) 147, 666, 669, 873
HaeIII GGCC 2 cut(s) 470, 714
HgaI GACGC 1 cut(s) 218
Hin1II CATG 8 cut(s) 25, 131, 302, 437, 593, 967, 1017, 1185
HinfI GANTC 6 cut(s) 107, 247, 410, 992, 1030, 1090
HphI GGTGA 4 cut(s) 181, 468, 641, 770
Hpy166II GTNNAC 1 cut(s) 676
Hpy188I TCNGA 8 cut(s) 112, 225, 356, 834, 892, 1099, 1251, 1288
Hpy188III TCNNGA 8 cut(s) 128, 244, 251, 307, 596, 827, 867, 1116
Hpy8I GTNNAC 1 cut(s) 676
HpyAV CCTTC 4 cut(s) 268, 274, 500, 1289
HpyCH4III ACNGT 2 cut(s) 864, 1129
HpyCH4IV ACGT 1 cut(s) 83
HpyCH4V TGCA 7 cut(s) 141, 149, 157, 437, 482, 576, 671
HpyF10VI GCNNNNNNNGC 4 cut(s) 467, 573, 737, 758
HpyF3I CTNAG 4 cut(s) 66, 353, 414, 899
HpySE526I ACGT 1 cut(s) 83
Hsp92II CATG 8 cut(s) 25, 131, 302, 437, 593, 967, 1017, 1185
KpnI GGTACC 1 cut(s) 271
Ksp22I TGATCA 1 cut(s) 220
Kzo9I GATC 8 cut(s) 91, 220, 240, 256, 580, 718, 770, 829
LguI GCTCTTC 1 cut(s) 1197
LmnI GCTCC 3 cut(s) 283, 737, 857
Lsp1109I GCAGC 3 cut(s) 133, 655, 677
LweI GCATC 2 cut(s) 928, 943
MaeI CTAG 8 cut(s) 287, 372, 453, 458, 692, 854, 1053, 1116
MaeII ACGT 1 cut(s) 83
MaeIII GTNAC 1 cut(s) 474
MalI GATC 8 cut(s) 93, 222, 242, 258, 582, 720, 772, 831
MboI GATC 8 cut(s) 91, 220, 240, 256, 580, 718, 770, 829
MflI RGATCY 3 cut(s) 91, 256, 770
MhlI GDGCHC 1 cut(s) 862
MlsI TGGCCA 1 cut(s) 714
MluCI AATT 4 cut(s) 194, 216, 347, 1240
MluNI TGGCCA 1 cut(s) 714
MlyI GAGTC 3 cut(s) 419, 1001, 1039
MmeI TCCRAC 2 cut(s) 570, 587
MnlI CCTC 8 cut(s) 43, 305, 378, 564, 570, 761, 763, 801
Mox20I TGGCCA 1 cut(s) 714
MroXI GAANNNNTTC 1 cut(s) 294
MscI TGGCCA 1 cut(s) 714
MseI TTAA 5 cut(s) 627, 654, 1197, 1272, 1315
MslI CAYNNNNRTG 2 cut(s) 333, 1098
Msp20I TGGCCA 1 cut(s) 714
MspA1I CMGCKG 1 cut(s) 668
MspCI CTTAAG 1 cut(s) 653
MspR9I CCNGG 1 cut(s) 782
Mva1269I GAATGC 1 cut(s) 159
MvaI CCWGG 1 cut(s) 782
MwoI GCNNNNNNNGC 4 cut(s) 467, 573, 737, 758
NdeII GATC 8 cut(s) 91, 220, 240, 256, 580, 718, 770, 829
NlaIII CATG 8 cut(s) 25, 131, 302, 437, 593, 967, 1017, 1185
NlaIV GGNNCC 1 cut(s) 269
NmuCI GTSAC 1 cut(s) 474
NspI RCATGY 3 cut(s) 437, 593, 1017
PagI TCATGA 1 cut(s) 127
PaqCI CACCTGC 2 cut(s) 487, 722
PciI ACATGT 1 cut(s) 1013
PciSI GCTCTTC 1 cut(s) 1197
PctI GAATGC 1 cut(s) 159
PdmI GAANNNNTTC 1 cut(s) 294
PfeI GAWTC 3 cut(s) 107, 247, 1090
PkrI GCNGC 4 cut(s) 148, 667, 670, 874
PleI GAGTC 3 cut(s) 418, 1000, 1038
PpsI GAGTC 3 cut(s) 418, 1000, 1038
PscI ACATGT 1 cut(s) 1013
Psp6I CCWGG 1 cut(s) 780
PspGI CCWGG 1 cut(s) 780
PspN4I GGNNCC 1 cut(s) 269
PspPI GGNCC 1 cut(s) 682
PstI CTGCAG 2 cut(s) 151, 673
PsuI RGATCY 3 cut(s) 91, 256, 770
PvuII CAGCTG 1 cut(s) 668
RsaI GTAC 2 cut(s) 269, 1171
RsaNI GTAC 2 cut(s) 268, 1170
RseI CAYNNNNRTG 2 cut(s) 333, 1098
SapI GCTCTTC 1 cut(s) 1197
SaqAI TTAA 5 cut(s) 627, 654, 1197, 1272, 1315
SatI GCNGC 4 cut(s) 147, 666, 669, 873
Sau3AI GATC 8 cut(s) 91, 220, 240, 256, 580, 718, 770, 829
Sau96I GGNCC 1 cut(s) 682
SchI GAGTC 3 cut(s) 419, 1001, 1039
ScrFI CCNGG 1 cut(s) 782
SduI GDGCHC 1 cut(s) 862
SfaNI GCATC 2 cut(s) 928, 943
SfcI CTRYAG 5 cut(s) 38, 147, 669, 747, 756
SinI GGWCC 1 cut(s) 682
SmiMI CAYNNNNRTG 2 cut(s) 333, 1098
SmlI CTYRAG 2 cut(s) 307, 653
SmoI CTYRAG 2 cut(s) 307, 653
Sse9I AATT 4 cut(s) 194, 216, 347, 1240
SsiI CCGC 4 cut(s) 400, 533, 873, 1221
SspMI CTAG 8 cut(s) 287, 372, 453, 458, 692, 854, 1053, 1116
StyD4I CCNGG 1 cut(s) 780
StyI CCWWGG 1 cut(s) 339
TaaI ACNGT 2 cut(s) 864, 1129
TaiI ACGT 1 cut(s) 86
TaqI TCGA 3 cut(s) 766, 884, 1133
TaqII GACCGA 1 cut(s) 783
TasI AATT 4 cut(s) 194, 216, 347, 1240
TatI WGTACW 1 cut(s) 1169
TauI GCSGC 1 cut(s) 875
TfiI GAWTC 3 cut(s) 107, 247, 1090
Tru1I TTAA 5 cut(s) 627, 654, 1197, 1272, 1315
Tru9I TTAA 5 cut(s) 627, 654, 1197, 1272, 1315
TscAI CASTG 3 cut(s) 180, 186, 340
TseFI GTSAC 1 cut(s) 474
TseI GCWGC 3 cut(s) 146, 665, 668
Tsp45I GTSAC 1 cut(s) 474
TspDTI ATGAA 8 cut(s) 116, 120, 144, 287, 506, 968, 1082, 1224
TspRI CASTG 3 cut(s) 180, 186, 340
Vha464I CTTAAG 1 cut(s) 653
VpaK11BI GGWCC 1 cut(s) 682
XbaI TCTAGA 1 cut(s) 1115
XceI RCATGY 3 cut(s) 437, 593, 1017
XmnI GAANNNNTTC 1 cut(s) 294
XspI CTAG 8 cut(s) 287, 372, 453, 458, 692, 854, 1053, 1116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.