RchiOBHm_Chr5g0010221
RLK Family

Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000146
Physical Location & Seq
Reverse (-)
6788770 .. 6790745
1976 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29101

Sequence Viewer

Length: 1890 bp
ATGGGTGGTGATCAAAGTGAAGGTCAGGGTTCTAAGACCAATGAGGTTCAGAAAGTTGAAGTCTCTGTTAAGAGCTCAGAAGGTGGTTCTTTTGGTGTTACCAAACTCACTGATACCAATTTCCGAACATGGAAGAAGATTATGTCCGTTTATCTTCGCGGGATACACAAGATGGGACATGTGACAGGAACAATCAAGGTTCCTAGTGAAGATGACATAGAGGCCTATGCTAAGTGGGAAGATGATGATGGGTTAGTAATGTCTATTTTATTTCGAGCCATGACTGATGATGTGCTACAGATGGTAGAGGAATGTGAAACTGCTGAGGCAATATGGAAGACGTTGGGAGATCTCTATACAAATGAGTCTGATTTTATACAGGTTCATGAACTGATGTACAAAGCTGCAGGAATGCAACAGAATGGGCAACCAGTGTCAGTGTTTTTCACCAAACTGAAGAATGTATGGGCTGAAATTGATCAGAAGCGTCCTTGCAAGATCAAGAATCAGGAAGATCTTGTGTGGTACCAGAAGGAGAAGGAGCTAGAAAGGGTTCATGTCTTCTTGAGAGGGCTTGATGAGAAGCATAGCAGTGCCAAGGGAGAATTGCTCAGAATGACAGACCCTCCTAGTTTGAACACAGCTTTTACATACATCCGCAAGGCAGAGTCTCAGCAGGAAAGTGTCAAACATGCACAGGTTGAAGTATCTAGCCTAGCCATTCAGGCCAAGTCACTTGCACCTTTCCTTCAGCAGCAGAGTTCAGCCCCACCTCATCAGCAAGGTTTGTCGCAAGGCTTCTCCAACCGTCCTCGTCCTCAATGCTCTTATTGCAACGATCTTGGGCATGTTCGAGAGACTTGTTGGAAGTTGAACCCACACCTTAAACCTAAAAAGCAAGGTTATCGCCTTAAGGGGAAAGCAGCTGCAGTTCACTTGGTCCAAGAACCAGATTTCTATGGAGTGGCTGGCCAAGATCATCATACAGTAGATGGAGCTACCCCTACAGCCTCTATAGCAGGTCGAGGTAAAATTGGTTTGGCTTTACAGATTTCTAACTTTGTTGGTTCTGATACATGGATTATTGATTCTGGTGCCTCTGATCATATGACTTATGACAAATCATATTTTACTGAATGGTCTTCCCCATCAGTGTCCTATGTAACCAATGTCAATGGTGAGGCTTTCCCTGTGTTAAGGTCAGGATCAGTGCGTATTACTCCCACTTTAGAACTTCATAATGTGTTATATGTGCCTGACTTATCTCATCACTTGATATCTGTCCCACAATTGAACACTGAGTCTAAATGTTCTGTAACCTTTTACCCTATGTATGTGATTTTTCAGGATCTTCTCACCAGGGAGATAGTCGGTCGGGGGTATCTGAGGGGCAGGTTATTCCATCTGGATCAGACATACGCAGGAGAGAAACCAGGAGCACAGTCCCGAGCCGCTTTGACTTCGACTTCTGATAAGCTAAATGAGATTTGGTTGTGGCATCGCCGTTTAGGGCATCCATCTTTTAGTCTTATGAAGAAAACCATGCCTACTCTGTTTATTGGTGTGGATGAGTCAGTTTTACATTGTGAAACATGTGTTTTAGCCAAGAGTCATTGTGCTACTTATTCTCCTAGTATTTCTAATAAAAGTATTATTCCTTTTGAGTTGATTCATTCTTATGTTTGGGGACCTTCTAGAGAGCCTACTGTATCGGGTATGCGATATTTCATGTTGTTTATTGATGATTGTACAAGATTGTCATGGGTTGCTCTTCTTAAAACCAAAGATGAAGTCTTCCCCGCTTTTCAAACCTTTCGTAATCTTGTTCAGACACAATATCATAGCACCATTAAAGTCCTTCGTTCTGACAATGGGGGGGGAGTATGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotran_gag_2

Protein Analysis

629

Amino Acids

70.68

Weight (kDa)

7.09

Isoelectric Point (pI)

38.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 58 - 129 6.2e-09 gag-polypeptide of LTR copia-type
Pol_BBD PF22936 360 - 433 3.7e-18 Pol polyprotein, beta-barrel domain
gag_pre-integrs PF13976 481 - 537 5.7e-15 GAG-pre-integrase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000146)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19561 FvH4_1g25371 FvH4_1g25961 FvH4_2g00352 FvH4_2g00861 FvH4_2g04952 FvH4_2g05413 FvH4_2g07531 FvH4_2g08961 FvH4_2g25141 FvH4_2g27292 FvH4_3g18164 FvH4_3g19921 FvH4_3g43870 FvH4_4g14441 FvH4_4g15581 FvH4_4g15582 FvH4_4g16890 FvH4_4g19782 FvH4_4g33444 FvH4_4g33921 FvH4_5g22281 FvH4_5g22282 FvH4_5g32571 FvH4_5g37451 FvH4_5g39631 FvH4_6g04721 FvH4_6g11661 FvH4_6g20571 FvH4_6g32791 FvH4_7g23184
prunus_persica Prupe.1G090900_v2.0.a1 Prupe.1G241200_v2.0.a1 Prupe.1G534100_v2.0.a1 Prupe.3G076700_v2.0.a1 Prupe.4G150800_v2.0.a1 Prupe.4G181800_v2.0.a1 Prupe.4G240900_v2.0.a1 Prupe.4G247600_v2.0.a1 Prupe.6G115900_v2.0.a1 Prupe.6G327500_v2.0.a1 Prupe.8G071700_v2.0.a1
pyrus_communis pycom06g11480 pycom10g08330 pycom15g04320 pycom15g04350 pycom15g12620 pycom2874g00060
rosa_chinensis RchiOBHm_Chr1g0317241 RchiOBHm_Chr1g0341801 RchiOBHm_Chr1g0341931 RchiOBHm_Chr1g0359621 RchiOBHm_Chr2g0113741 RchiOBHm_Chr2g0117261 RchiOBHm_Chr2g0138831 RchiOBHm_Chr2g0141421 RchiOBHm_Chr2g0145281 RchiOBHm_Chr2g0152991 RchiOBHm_Chr3g0448001 RchiOBHm_Chr3g0450981 RchiOBHm_Chr3g0455161 RchiOBHm_Chr3g0457401 RchiOBHm_Chr3g0460001 RchiOBHm_Chr4g0387431 RchiOBHm_Chr4g0388741 RchiOBHm_Chr4g0444201 RchiOBHm_Chr4g0444261 RchiOBHm_Chr5g0010221 RchiOBHm_Chr6g0271721 RchiOBHm_Chr6g0274641 RchiOBHm_Chr6g0294691 RchiOBHm_Chr7g0237031 RchiOBHm_Chr7g0238461 RchiOBHm_Chr7g0239981
rosa_laevigata RLG00000009017
rosa_multiflora Rmu_co7986768.1_g000001 Rmu_co8302239.1_g000001 Rmu_co8485799.1_g000001 Rmu_sc0000061.1_g000013 Rmu_sc0000303.1_g000034 Rmu_sc0000303.1_g000035 Rmu_sc0000315.1_g000017 Rmu_sc0000349.1_g000003 Rmu_sc0000498.1_g000068 Rmu_sc0000508.1_g000014 Rmu_sc0000602.1_g000001 Rmu_sc0000633.1_g000002 Rmu_sc0000638.1_g000030 Rmu_sc0000756.1_g000016 Rmu_sc0000756.1_g000017 Rmu_sc0000785.1_g000037 Rmu_sc0000795.1_g000017 Rmu_sc0000796.1_g000030 Rmu_sc0000863.1_g000023 Rmu_sc0000920.1_g000021 Rmu_sc0000960.1_g000015 Rmu_sc0000982.1_g000102 Rmu_sc0001036.1_g000008 Rmu_sc0001036.1_g000009 Rmu_sc0001643.1_g000029 Rmu_sc0001687.1_g000026 Rmu_sc0001708.1_g000037 Rmu_sc0001768.1_g000015 Rmu_sc0001790.1_g000022 Rmu_sc0002180.1_g000007 Rmu_sc0002211.1_g000006 Rmu_sc0002270.1_g000010 Rmu_sc0002404.1_g000031 Rmu_sc0002858.1_g000016 Rmu_sc0003063.1_g000028 Rmu_sc0003730.1_g000017 Rmu_sc0004087.1_g000020 Rmu_sc0004618.1_g000048 Rmu_sc0004724.1_g000005 Rmu_sc0005167.1_g000036 Rmu_sc0005781.1_g000003 Rmu_sc0005878.1_g000012 Rmu_sc0006011.1_g000003 Rmu_sc0006343.1_g000011 Rmu_sc0006573.1_g000007 Rmu_sc0006599.1_g000007 Rmu_sc0006803.1_g000014 Rmu_sc0006836.1_g000002 Rmu_sc0006849.1_g000002 Rmu_sc0007109.1_g000009 Rmu_sc0009268.1_g000016 Rmu_sc0009618.1_g000017 Rmu_sc0009674.1_g000009 Rmu_sc0010244.1_g000009 Rmu_sc0011151.1_g000004 Rmu_sc0011356.1_g000001 Rmu_sc0011674.1_g000002 Rmu_sc0011778.1_g000016 Rmu_sc0012342.1_g000001 Rmu_sc0012467.1_g000002 Rmu_sc0012574.1_g000003 Rmu_sc0012913.1_g000005 Rmu_sc0013612.1_g000020 Rmu_sc0014824.1_g000001 Rmu_sc0017869.1_g000002 Rmu_sc0018085.1_g000003 Rmu_sc0024789.1_g000001 Rmu_sc0025106.1_g000013 Rmu_sc0034502.1_g000001 Rmu_sc0034547.1_g000001 Rmu_sc0035094.1_g000001 Rmu_sc0035095.1_g000001 Rmu_ssc0000100.1_g000027 Rmu_ssc0000244.1_g000005 Rmu_ssc0000371.1_g000029 Rmu_ssc0000381.1_g000004
rosa_roxburghii Rroxscaffold_1G00015480 Rroxscaffold_1G00023580 Rroxscaffold_1G00039340 Rroxscaffold_1G00047080 Rroxscaffold_2G00095820 Rroxscaffold_2G00125200 Rroxscaffold_2G00128330 Rroxscaffold_3G00270860
rosa_rugosa Rorug06G0120700
rosa_samantha Rh3BG173100 Rh6AG089600 Rh7AG488100 Rh7DG389600
rosa_wichuraiana Rw0G001150 Rw0G001990 Rw0G002010 Rw0G019540 Rw1G013730 Rw1G024110 Rw1G029190 Rw2G018850 Rw2G021090 Rw2G022260 Rw2G023180 Rw2G027280 Rw3G010190 Rw3G020660 Rw3G029380 Rw4G002390 Rw4G002690 Rw4G033260 Rw5G011960 Rw5G023110 Rw5G025250 Rw5G028950 Rw5G033740 Rw5G033950 Rw5G037900 Rw6G009640 Rw6G011620 Rw6G027720 Rw7G010680 Rw7G042070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1010, 1383
Acc65I GGTACC 1 cut(s) 525
AccB1I GGYRCC 2 cut(s) 525, 1094
AccII CGCG 1 cut(s) 159
AciI CCGC 4 cut(s) 159, 658, 1452, 1800
AclWI GGATC 3 cut(s) 1213, 1356, 1416
AcoI YGGCCR 1 cut(s) 970
AcuI CTGAAG 2 cut(s) 476, 734
AfaI GTAC 3 cut(s) 398, 527, 1750
AflII CTTAAG 1 cut(s) 911
AflIII ACRYGT 2 cut(s) 178, 1592
AgsI TTSAA 6 cut(s) 59, 637, 704, 874, 1294, 1808
AjnI CCWGG 2 cut(s) 1358, 1432
AluBI AGCT 7 cut(s) 75, 404, 544, 644, 926, 998, 1477
AluI AGCT 7 cut(s) 75, 404, 544, 644, 926, 998, 1477
Alw21I GWGCWC 2 cut(s) 77, 1441
Alw26I GTCTC 3 cut(s) 67, 675, 851
AlwI GGATC 3 cut(s) 1213, 1356, 1416
Ama87I CYCGRG 1 cut(s) 1446
AoxI GGCC 3 cut(s) 222, 726, 970
ApeKI GCWGC 4 cut(s) 404, 754, 923, 926
ArsI GACNNNNNNTTYG 4 cut(s) 7, 39, 1776, 1808
Asp700I GAANNNNTTC 1 cut(s) 552
Asp718I GGTACC 1 cut(s) 525
AspS9I GGNCC 2 cut(s) 940, 1688
AsuHPI GGTGA 4 cut(s) 20, 439, 1190, 1348
AvaI CYCGRG 1 cut(s) 1446
AvaII GGWCC 2 cut(s) 940, 1688
BalI TGGCCA 1 cut(s) 972
BanI GGYRCC 2 cut(s) 525, 1094
BanII GRGCYC 1 cut(s) 77
BbsI GAAGAC 4 cut(s) 344, 553, 1134, 1786
Bbv12I GWGCWC 2 cut(s) 77, 1441
BbvCI CCTCAGC 1 cut(s) 324
BbvI GCAGC 4 cut(s) 391, 766, 913, 935
BccI CCATC 7 cut(s) 166, 242, 295, 986, 1156, 1410, 1525
BceAI ACGGC 1 cut(s) 1488
BcgI CGANNNNNNTGC 2 cut(s) 887, 921
BciT130I CCWGG 2 cut(s) 1360, 1434
BciVI GTATCC 1 cut(s) 156
BclI TGATCA 3 cut(s) 10, 478, 1102
BcoDI GTCTC 3 cut(s) 67, 675, 851
BfaI CTAG 7 cut(s) 204, 545, 630, 711, 716, 1632, 1695
BfmI CTRYAG 5 cut(s) 296, 405, 927, 1005, 1014
BfrI CTTAAG 1 cut(s) 911
BfuAI ACCTGC 2 cut(s) 1010, 1383
BfuI GTATCC 1 cut(s) 156
BglI GCCNNNNNGGC 1 cut(s) 725
BglII AGATCT 2 cut(s) 349, 514
BisI GCNGC 5 cut(s) 405, 755, 924, 927, 1452
BlsI GCNGC 5 cut(s) 406, 756, 925, 928, 1453
Bme1390I CCNGG 2 cut(s) 1360, 1434
Bme18I GGWCC 2 cut(s) 940, 1688
BmeT110I CYCGRG 1 cut(s) 1446
BmgT120I GGNCC 2 cut(s) 940, 1688
BmiI GGNNCC 4 cut(s) 201, 527, 1096, 1689
BmrFI CCNGG 2 cut(s) 1360, 1434
BmsI GCATC 2 cut(s) 1507, 1522
BpiI GAAGAC 4 cut(s) 344, 553, 1134, 1786
BplI GAGNNNNNCTC 2 cut(s) 594, 626
Bpu10I CCTNAGC 1 cut(s) 324
BpuEI CTTGAG 1 cut(s) 586
BsaJI CCNNGG 2 cut(s) 597, 1359
BsaXI ACNNNNNCTCC 4 cut(s) 610, 640, 1612, 1642
Bse1I ACTGG 1 cut(s) 431
BseBI CCWGG 2 cut(s) 1360, 1434
BseDI CCNNGG 2 cut(s) 597, 1359
BseGI GGATG 3 cut(s) 654, 1513, 1573
BseMII CTCAG 6 cut(s) 90, 315, 625, 686, 1290, 1376
BseNI ACTGG 1 cut(s) 431
BseXI GCAGC 4 cut(s) 391, 766, 913, 935
Bsh1236I CGCG 1 cut(s) 159
Bsh1285I CGRYCG 1 cut(s) 1375
BshFI GGCC 3 cut(s) 224, 728, 972
BshNI GGYRCC 2 cut(s) 525, 1094
BsiEI CGRYCG 1 cut(s) 1375
BsiHKAI GWGCWC 2 cut(s) 77, 1441
BsiHKCI CYCGRG 1 cut(s) 1446
BslFI GGGAC 4 cut(s) 189, 1268, 1429, 1701
BsmAI GTCTC 3 cut(s) 67, 675, 851
BsmFI GGGAC 4 cut(s) 189, 1268, 1429, 1701
BsmI GAATGC 1 cut(s) 417
BsnI GGCC 3 cut(s) 224, 728, 972
BsoBI CYCGRG 1 cut(s) 1446
Bsp1286I GDGCHC 2 cut(s) 77, 1441
Bsp1407I TGTACA 2 cut(s) 396, 1748
BspACI CCGC 4 cut(s) 159, 658, 1452, 1800
BspANI GGCC 3 cut(s) 224, 728, 972
BspCNI CTCAG 6 cut(s) 89, 316, 624, 685, 1291, 1377
BspFNI CGCG 1 cut(s) 159
BspHI TCATGA 1 cut(s) 385
BspLI GGNNCC 4 cut(s) 201, 527, 1096, 1689
BspMAI CTGCAG 2 cut(s) 409, 931
BspMI ACCTGC 2 cut(s) 1010, 1383
BspPI GGATC 3 cut(s) 1213, 1356, 1416
BspQI GCTCTTC 1 cut(s) 1776
BspT107I GGYRCC 2 cut(s) 525, 1094
BspTI CTTAAG 1 cut(s) 911
BsrGI TGTACA 2 cut(s) 396, 1748
BsrI ACTGG 1 cut(s) 431
BssECI CCNNGG 2 cut(s) 597, 1359
BssT1I CCWWGG 1 cut(s) 597
Bst2UI CCWGG 2 cut(s) 1360, 1434
Bst4CI ACNGT 4 cut(s) 809, 988, 1443, 1708
Bst6I CTCTTC 1 cut(s) 1776
BstAFI CTTAAG 1 cut(s) 911
BstAUI TGTACA 2 cut(s) 396, 1748
BstC8I GCNNGC 1 cut(s) 970
BstDEI CTNAG 8 cut(s) 33, 76, 231, 324, 611, 672, 1299, 1385
BstF5I GGATG 3 cut(s) 654, 1513, 1573
BstFNI CGCG 1 cut(s) 159
BstMAI GTCTC 3 cut(s) 67, 675, 851
BstMCI CGRYCG 1 cut(s) 1375
BstMWI GCNNNNNNNGC 3 cut(s) 725, 831, 1016
BstNI CCWGG 2 cut(s) 1360, 1434
BstNSI RCATGY 4 cut(s) 182, 695, 851, 1596
BstSCI CCNGG 2 cut(s) 1358, 1432
BstSFI CTRYAG 5 cut(s) 296, 405, 927, 1005, 1014
BstUI CGCG 1 cut(s) 159
BstV1I GCAGC 4 cut(s) 391, 766, 913, 935
BstV2I GAAGAC 4 cut(s) 344, 553, 1134, 1786
BstX2I RGATCY 3 cut(s) 349, 514, 1348
BstYI RGATCY 3 cut(s) 349, 514, 1348
BsuI GTATCC 1 cut(s) 156
BsuRI GGCC 3 cut(s) 224, 728, 972
BtgZI GCGATG 1 cut(s) 1484
BtsCI GGATG 3 cut(s) 654, 1513, 1573
BtsI GCAGTG 1 cut(s) 598
BtsIMutI CAGTG 7 cut(s) 108, 438, 444, 598, 1158, 1215, 1296
BveI ACCTGC 2 cut(s) 1010, 1383
Cac8I GCNNGC 1 cut(s) 970
CciI TCATGA 1 cut(s) 385
Cfr13I GGNCC 2 cut(s) 940, 1688
CseI GACGC 1 cut(s) 476
Csp6I GTAC 3 cut(s) 397, 526, 1749
CviQI GTAC 3 cut(s) 397, 526, 1749
DdeI CTNAG 8 cut(s) 33, 76, 231, 324, 611, 672, 1299, 1385
EaeI YGGCCR 1 cut(s) 970
Eam1104I CTCTTC 1 cut(s) 1776
EarI CTCTTC 1 cut(s) 1776
Ecl136II GAGCTC 1 cut(s) 75
Eco130I CCWWGG 1 cut(s) 597
Eco147I AGGCCT 1 cut(s) 224
Eco24I GRGCYC 1 cut(s) 77
Eco32I GATATC 1 cut(s) 1278
Eco47I GGWCC 2 cut(s) 940, 1688
Eco53kI GAGCTC 1 cut(s) 75
Eco57I CTGAAG 2 cut(s) 476, 734
Eco88I CYCGRG 1 cut(s) 1446
EcoICRI GAGCTC 1 cut(s) 75
EcoO109I RGGNCCY 1 cut(s) 1688
EcoRII CCWGG 2 cut(s) 1358, 1432
EcoRV GATATC 1 cut(s) 1278
EcoT14I CCWWGG 1 cut(s) 597
EcoT38I GRGCYC 1 cut(s) 77
ErhI CCWWGG 1 cut(s) 597
FaqI GGGAC 4 cut(s) 189, 1268, 1429, 1701
FauI CCCGC 2 cut(s) 152, 1807
FauNDI CATATG 1 cut(s) 1107
FbaI TGATCA 3 cut(s) 10, 478, 1102
Fnu4HI GCNGC 5 cut(s) 405, 755, 924, 927, 1452
FokI GGATG 3 cut(s) 641, 1500, 1580
FriOI GRGCYC 1 cut(s) 77
Fsp4HI GCNGC 5 cut(s) 405, 755, 924, 927, 1452
FspBI CTAG 7 cut(s) 204, 545, 630, 711, 716, 1632, 1695
GluI GCNGC 5 cut(s) 405, 755, 924, 927, 1452
HaeIII GGCC 3 cut(s) 224, 728, 972
HgaI GACGC 1 cut(s) 476
HinfI GANTC 8 cut(s) 365, 505, 668, 1088, 1301, 1571, 1609, 1669
HphI GGTGA 4 cut(s) 20, 439, 1190, 1348
Hpy166II GTNNAC 1 cut(s) 934
Hpy8I GTNNAC 1 cut(s) 934
HpyAV CCTTC 7 cut(s) 14, 74, 526, 532, 758, 1701, 1868
HpyCH4III ACNGT 4 cut(s) 809, 988, 1443, 1708
HpyCH4IV ACGT 1 cut(s) 341
HpyCH4V TGCA 7 cut(s) 407, 415, 495, 695, 740, 834, 929
HpyF10VI GCNNNNNNNGC 3 cut(s) 725, 831, 1016
HpyF3I CTNAG 8 cut(s) 33, 76, 231, 324, 611, 672, 1299, 1385
HpySE526I ACGT 1 cut(s) 341
KpnI GGTACC 1 cut(s) 529
Ksp22I TGATCA 3 cut(s) 10, 478, 1102
LguI GCTCTTC 1 cut(s) 1776
LmnI GCTCC 3 cut(s) 541, 995, 1436
Lsp1109I GCAGC 4 cut(s) 391, 766, 913, 935
LweI GCATC 2 cut(s) 1507, 1522
MaeI CTAG 7 cut(s) 204, 545, 630, 711, 716, 1632, 1695
MaeII ACGT 1 cut(s) 341
MaeIII GTNAC 5 cut(s) 97, 181, 732, 1162, 1315
MfeI CAATTG 1 cut(s) 1289
MflI RGATCY 3 cut(s) 349, 514, 1348
MhlI GDGCHC 2 cut(s) 77, 1441
MlsI TGGCCA 1 cut(s) 972
MluCI AATT 5 cut(s) 118, 474, 605, 1032, 1289
MluNI TGGCCA 1 cut(s) 972
MlyI GAGTC 5 cut(s) 374, 677, 1310, 1580, 1618
MmeI TCCRAC 2 cut(s) 828, 845
Mox20I TGGCCA 1 cut(s) 972
MroXI GAANNNNTTC 1 cut(s) 552
MscI TGGCCA 1 cut(s) 972
MseI TTAA 7 cut(s) 69, 885, 912, 1196, 1776, 1851, 1888
MslI CAYNNNNRTG 2 cut(s) 591, 1677
Msp20I TGGCCA 1 cut(s) 972
MspA1I CMGCKG 1 cut(s) 926
MspCI CTTAAG 1 cut(s) 911
MspR9I CCNGG 2 cut(s) 1360, 1434
MunI CAATTG 1 cut(s) 1289
Mva1269I GAATGC 1 cut(s) 417
MvaI CCWGG 2 cut(s) 1360, 1434
MvnI CGCG 1 cut(s) 159
MwoI GCNNNNNNNGC 3 cut(s) 725, 831, 1016
NdeI CATATG 1 cut(s) 1107
NlaIV GGNNCC 4 cut(s) 201, 527, 1096, 1689
NmuCI GTSAC 2 cut(s) 181, 732
NspI RCATGY 4 cut(s) 182, 695, 851, 1596
PagI TCATGA 1 cut(s) 385
PceI AGGCCT 1 cut(s) 224
PciI ACATGT 2 cut(s) 178, 1592
PciSI GCTCTTC 1 cut(s) 1776
PctI GAATGC 1 cut(s) 417
PdmI GAANNNNTTC 1 cut(s) 552
PfeI GAWTC 3 cut(s) 505, 1088, 1669
PkrI GCNGC 5 cut(s) 406, 756, 925, 928, 1453
PleI GAGTC 5 cut(s) 373, 676, 1309, 1579, 1617
PpsI GAGTC 5 cut(s) 373, 676, 1309, 1579, 1617
PpuMI RGGWCCY 1 cut(s) 1688
PscI ACATGT 2 cut(s) 178, 1592
Psp124BI GAGCTC 1 cut(s) 77
Psp5II RGGWCCY 1 cut(s) 1688
Psp6I CCWGG 2 cut(s) 1358, 1432
PspGI CCWGG 2 cut(s) 1358, 1432
PspN4I GGNNCC 4 cut(s) 201, 527, 1096, 1689
PspPI GGNCC 2 cut(s) 940, 1688
PspPPI RGGWCCY 1 cut(s) 1688
PstI CTGCAG 2 cut(s) 409, 931
PsuI RGATCY 3 cut(s) 349, 514, 1348
PvuII CAGCTG 1 cut(s) 926
RsaI GTAC 3 cut(s) 398, 527, 1750
RsaNI GTAC 3 cut(s) 397, 526, 1749
RseI CAYNNNNRTG 2 cut(s) 591, 1677
SacI GAGCTC 1 cut(s) 77
SapI GCTCTTC 1 cut(s) 1776
SaqAI TTAA 7 cut(s) 69, 885, 912, 1196, 1776, 1851, 1888
SatI GCNGC 5 cut(s) 405, 755, 924, 927, 1452
Sau96I GGNCC 2 cut(s) 940, 1688
SchI GAGTC 5 cut(s) 374, 677, 1310, 1580, 1618
ScrFI CCNGG 2 cut(s) 1360, 1434
SduI GDGCHC 2 cut(s) 77, 1441
SfaNI GCATC 2 cut(s) 1507, 1522
SfcI CTRYAG 5 cut(s) 296, 405, 927, 1005, 1014
SinI GGWCC 2 cut(s) 940, 1688
SmiMI CAYNNNNRTG 2 cut(s) 591, 1677
SmlI CTYRAG 2 cut(s) 565, 911
SmoI CTYRAG 2 cut(s) 565, 911
Sse9I AATT 5 cut(s) 118, 474, 605, 1032, 1289
SseBI AGGCCT 1 cut(s) 224
SsiI CCGC 4 cut(s) 159, 658, 1452, 1800
SspMI CTAG 7 cut(s) 204, 545, 630, 711, 716, 1632, 1695
SstI GAGCTC 1 cut(s) 77
StuI AGGCCT 1 cut(s) 224
StyD4I CCNGG 2 cut(s) 1358, 1432
StyI CCWWGG 1 cut(s) 597
TaaI ACNGT 4 cut(s) 809, 988, 1443, 1708
TaiI ACGT 1 cut(s) 344
TaqI TCGA 4 cut(s) 274, 853, 1024, 1463
TaqII GACCGA 1 cut(s) 1361
TasI AATT 5 cut(s) 118, 474, 605, 1032, 1289
TatI WGTACW 2 cut(s) 396, 1748
TauI GCSGC 1 cut(s) 1454
TfiI GAWTC 3 cut(s) 505, 1088, 1669
Tru1I TTAA 7 cut(s) 69, 885, 912, 1196, 1776, 1851, 1888
Tru9I TTAA 7 cut(s) 69, 885, 912, 1196, 1776, 1851, 1888
TscAI CASTG 7 cut(s) 115, 438, 444, 598, 1158, 1215, 1303
TseFI GTSAC 2 cut(s) 181, 732
TseI GCWGC 4 cut(s) 404, 754, 923, 926
Tsp45I GTSAC 2 cut(s) 181, 732
TspDTI ATGAA 8 cut(s) 374, 402, 545, 1226, 1547, 1661, 1717, 1803
TspGWI ACGGA 1 cut(s) 136
TspRI CASTG 7 cut(s) 115, 438, 444, 598, 1158, 1215, 1303
Vha464I CTTAAG 1 cut(s) 911
VpaK11BI GGWCC 2 cut(s) 940, 1688
XbaI TCTAGA 1 cut(s) 1694
XceI RCATGY 4 cut(s) 182, 695, 851, 1596
XmnI GAANNNNTTC 1 cut(s) 552
XspI CTAG 7 cut(s) 204, 545, 630, 711, 716, 1632, 1695
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.