Rw0G002010
RLK Family

Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00062
OG0000146
Physical Location & Seq
Reverse (-)
72988 .. 74312
1325 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G002010.1

Sequence Viewer

Length: 1014 bp
ATGTCTGTCCATCTTCGTGGCATACACAAGATGGGGCACGTGATTGGGACAATCAAAGCTCCTAGCGAGGAAGATGCGGCCACTTATGCTAAGTGGGAGGATGATGATGGATCTGTGATGGCTCTCTTATTCAAAGCCATGACTGAAGATGTGCTACAGTTGGTGGAAGAATGTGAGACTGCTGCAACAATATGGAAGACGTTGGGGGATTTGTATACCAACGAGTCCGATTTTATACAGGTTCATGAATTGATGTGTAAAGCAGCTAGTATGCAACAGCATGGGCAACCAGTAGCTGTGTATTTCACCAAGCTGAAGAATATATGGGCTGAAATTGATCAGAAGCGTCCTTGCAAAATCAAGAATCAGGAAGATCTTGTGTGGTACCAGAAGGAGAAGGAGCTAGAAAGGGTTCATGTATTCCTGAGAGGGCTTGATGAGAAGCATAGCAGTGCCAAGGGAGAGTTGCTTAGAATGCCAGATCCTCCTAGCTTGACCACAGCTTTCACATACATTCGTAAGGATGAGTCTCAGCAGGAAAGTCTCAAACAGGCGCAAGTTGAAGTATCTAGCCTAGCTGTTCAAGCACCAGCACCTTTTCTTCAGCAGCAGAAATCAGTACCAGCTCATCAGCAAGGACCTCCACCAGGCTTCACCAACCGTCCTCATCCTCAGTGTTCTTATTGCACCGACCTTGGGCATGTTCGGGAGACTTGCTGGAAGCTGCATCCGCACCTCAAACCTAAAAAGCAAGGTTATCATCCTAAGGCGAAGGCAGCTGCTGTTCAATTGGTCCAAGAACCAGATTTCTATGGCGTGGCTGGACAAGATCATTATACAGCAGGTGGAGTTACTCCTACAGCCTCTATAGCTGGTCGTGGTAAGATTGGATCTTCTCACCAGGGAGTTAGTCGGTCGGGGGTATCTGAGGGGCAGGTTGTTCCATCTAGATCAGACATACGCAGGAGAGAAACCAGGAGCACAGTCCCGAGCCGCTTTGACTTCGAATTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotran_gag_2

Protein Analysis

337

Amino Acids

37.71

Weight (kDa)

7.25

Isoelectric Point (pI)

55.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 13 - 112 2.1e-10 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000146)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19561 FvH4_1g25371 FvH4_1g25961 FvH4_2g00352 FvH4_2g00861 FvH4_2g04952 FvH4_2g05413 FvH4_2g07531 FvH4_2g08961 FvH4_2g25141 FvH4_2g27292 FvH4_3g18164 FvH4_3g19921 FvH4_3g43870 FvH4_4g14441 FvH4_4g15581 FvH4_4g15582 FvH4_4g16890 FvH4_4g19782 FvH4_4g33444 FvH4_4g33921 FvH4_5g22281 FvH4_5g22282 FvH4_5g32571 FvH4_5g37451 FvH4_5g39631 FvH4_6g04721 FvH4_6g11661 FvH4_6g20571 FvH4_6g32791 FvH4_7g23184
prunus_persica Prupe.1G090900_v2.0.a1 Prupe.1G241200_v2.0.a1 Prupe.1G534100_v2.0.a1 Prupe.3G076700_v2.0.a1 Prupe.4G150800_v2.0.a1 Prupe.4G181800_v2.0.a1 Prupe.4G240900_v2.0.a1 Prupe.4G247600_v2.0.a1 Prupe.6G115900_v2.0.a1 Prupe.6G327500_v2.0.a1 Prupe.8G071700_v2.0.a1
pyrus_communis pycom06g11480 pycom10g08330 pycom15g04320 pycom15g04350 pycom15g12620 pycom2874g00060
rosa_chinensis RchiOBHm_Chr1g0317241 RchiOBHm_Chr1g0341801 RchiOBHm_Chr1g0341931 RchiOBHm_Chr1g0359621 RchiOBHm_Chr2g0113741 RchiOBHm_Chr2g0117261 RchiOBHm_Chr2g0138831 RchiOBHm_Chr2g0141421 RchiOBHm_Chr2g0145281 RchiOBHm_Chr2g0152991 RchiOBHm_Chr3g0448001 RchiOBHm_Chr3g0450981 RchiOBHm_Chr3g0455161 RchiOBHm_Chr3g0457401 RchiOBHm_Chr3g0460001 RchiOBHm_Chr4g0387431 RchiOBHm_Chr4g0388741 RchiOBHm_Chr4g0444201 RchiOBHm_Chr4g0444261 RchiOBHm_Chr5g0010221 RchiOBHm_Chr6g0271721 RchiOBHm_Chr6g0274641 RchiOBHm_Chr6g0294691 RchiOBHm_Chr7g0237031 RchiOBHm_Chr7g0238461 RchiOBHm_Chr7g0239981
rosa_laevigata RLG00000009017
rosa_multiflora Rmu_co7986768.1_g000001 Rmu_co8302239.1_g000001 Rmu_co8485799.1_g000001 Rmu_sc0000061.1_g000013 Rmu_sc0000303.1_g000034 Rmu_sc0000303.1_g000035 Rmu_sc0000315.1_g000017 Rmu_sc0000349.1_g000003 Rmu_sc0000498.1_g000068 Rmu_sc0000508.1_g000014 Rmu_sc0000602.1_g000001 Rmu_sc0000633.1_g000002 Rmu_sc0000638.1_g000030 Rmu_sc0000756.1_g000016 Rmu_sc0000756.1_g000017 Rmu_sc0000785.1_g000037 Rmu_sc0000795.1_g000017 Rmu_sc0000796.1_g000030 Rmu_sc0000863.1_g000023 Rmu_sc0000920.1_g000021 Rmu_sc0000960.1_g000015 Rmu_sc0000982.1_g000102 Rmu_sc0001036.1_g000008 Rmu_sc0001036.1_g000009 Rmu_sc0001643.1_g000029 Rmu_sc0001687.1_g000026 Rmu_sc0001708.1_g000037 Rmu_sc0001768.1_g000015 Rmu_sc0001790.1_g000022 Rmu_sc0002180.1_g000007 Rmu_sc0002211.1_g000006 Rmu_sc0002270.1_g000010 Rmu_sc0002404.1_g000031 Rmu_sc0002858.1_g000016 Rmu_sc0003063.1_g000028 Rmu_sc0003730.1_g000017 Rmu_sc0004087.1_g000020 Rmu_sc0004618.1_g000048 Rmu_sc0004724.1_g000005 Rmu_sc0005167.1_g000036 Rmu_sc0005781.1_g000003 Rmu_sc0005878.1_g000012 Rmu_sc0006011.1_g000003 Rmu_sc0006343.1_g000011 Rmu_sc0006573.1_g000007 Rmu_sc0006599.1_g000007 Rmu_sc0006803.1_g000014 Rmu_sc0006836.1_g000002 Rmu_sc0006849.1_g000002 Rmu_sc0007109.1_g000009 Rmu_sc0009268.1_g000016 Rmu_sc0009618.1_g000017 Rmu_sc0009674.1_g000009 Rmu_sc0010244.1_g000009 Rmu_sc0011151.1_g000004 Rmu_sc0011356.1_g000001 Rmu_sc0011674.1_g000002 Rmu_sc0011778.1_g000016 Rmu_sc0012342.1_g000001 Rmu_sc0012467.1_g000002 Rmu_sc0012574.1_g000003 Rmu_sc0012913.1_g000005 Rmu_sc0013612.1_g000020 Rmu_sc0014824.1_g000001 Rmu_sc0017869.1_g000002 Rmu_sc0018085.1_g000003 Rmu_sc0024789.1_g000001 Rmu_sc0025106.1_g000013 Rmu_sc0034502.1_g000001 Rmu_sc0034547.1_g000001 Rmu_sc0035094.1_g000001 Rmu_sc0035095.1_g000001 Rmu_ssc0000100.1_g000027 Rmu_ssc0000244.1_g000005 Rmu_ssc0000371.1_g000029 Rmu_ssc0000381.1_g000004
rosa_roxburghii Rroxscaffold_1G00015480 Rroxscaffold_1G00023580 Rroxscaffold_1G00039340 Rroxscaffold_1G00047080 Rroxscaffold_2G00095820 Rroxscaffold_2G00125200 Rroxscaffold_2G00128330 Rroxscaffold_3G00270860
rosa_rugosa Rorug06G0120700
rosa_samantha Rh3BG173100 Rh6AG089600 Rh7AG488100 Rh7DG389600
rosa_wichuraiana Rw0G001150 Rw0G001990 Rw0G002010 Rw0G019540 Rw1G013730 Rw1G024110 Rw1G029190 Rw2G018850 Rw2G021090 Rw2G022260 Rw2G023180 Rw2G027280 Rw3G010190 Rw3G020660 Rw3G029380 Rw4G002390 Rw4G002690 Rw4G033260 Rw5G011960 Rw5G023110 Rw5G025250 Rw5G028950 Rw5G033740 Rw5G033950 Rw5G037900 Rw6G009640 Rw6G011620 Rw6G027720 Rw7G010680 Rw7G042070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 833
Acc36I ACCTGC 2 cut(s) 833, 925
Acc65I GGTACC 1 cut(s) 384
AccB1I GGYRCC 1 cut(s) 384
AccI GTMKAC 1 cut(s) 215
AciI CCGC 3 cut(s) 77, 731, 994
AclWI GGATC 3 cut(s) 118, 476, 898
AcoI YGGCCR 1 cut(s) 78
AcsI RAATTY 1 cut(s) 1007
AcuI CTGAAG 3 cut(s) 165, 335, 587
AcvI CACGTG 1 cut(s) 40
AfaI GTAC 2 cut(s) 386, 621
AfiI CCNNNNNNNGG 2 cut(s) 647, 696
AgsI TTSAA 4 cut(s) 133, 563, 584, 788
AjnI CCWGG 3 cut(s) 646, 900, 974
Alw21I GWGCWC 1 cut(s) 983
Alw26I GTCTC 4 cut(s) 170, 534, 548, 704
AlwI GGATC 3 cut(s) 118, 476, 898
AlwNI CAGNNNCTG 2 cut(s) 296, 782
Ama87I CYCGRG 1 cut(s) 988
AoxI GGCC 1 cut(s) 78
ApeKI GCWGC 6 cut(s) 182, 263, 607, 724, 776, 779
ApoI RAATTY 1 cut(s) 1007
Asp700I GAANNNNTTC 1 cut(s) 411
Asp718I GGTACC 1 cut(s) 384
AspLEI GCGC 1 cut(s) 556
AspS9I GGNCC 2 cut(s) 638, 793
AsuHPI GGTGA 3 cut(s) 298, 646, 890
AsuII TTCGAA 1 cut(s) 1005
AvaI CYCGRG 1 cut(s) 988
AvaII GGWCC 2 cut(s) 638, 793
AxyI CCTNAGG 1 cut(s) 765
BaeGI GKGCMC 1 cut(s) 39
BanI GGYRCC 1 cut(s) 384
BarI GAAGNNNNNNTAC 2 cut(s) 138, 170
BbrPI CACGTG 1 cut(s) 40
BbsI GAAGAC 1 cut(s) 203
Bbv12I GWGCWC 1 cut(s) 983
BbvI GCAGC 6 cut(s) 169, 275, 619, 711, 766, 788
BccI CCATC 5 cut(s) 18, 25, 101, 112, 952
BcgI CGANNNNNNTGC 2 cut(s) 56, 90
BciT130I CCWGG 3 cut(s) 648, 902, 976
BclI TGATCA 1 cut(s) 337
BcoDI GTCTC 4 cut(s) 170, 534, 548, 704
BfaI CTAG 7 cut(s) 63, 267, 404, 489, 570, 575, 948
BfmI CTRYAG 3 cut(s) 155, 858, 867
BfuAI ACCTGC 2 cut(s) 833, 925
BglII AGATCT 1 cut(s) 373
BisI GCNGC 8 cut(s) 78, 183, 264, 608, 725, 777, 780, 994
BlsI GCNGC 8 cut(s) 79, 184, 265, 609, 726, 778, 781, 995
Bme1390I CCNGG 3 cut(s) 648, 902, 976
Bme18I GGWCC 2 cut(s) 638, 793
BmeT110I CYCGRG 1 cut(s) 988
BmgT120I GGNCC 2 cut(s) 638, 793
BmiI GGNNCC 1 cut(s) 386
BmrFI CCNGG 3 cut(s) 648, 902, 976
BmsI GCATC 2 cut(s) 64, 736
BpiI GAAGAC 1 cut(s) 203
Bpu14I TTCGAA 1 cut(s) 1005
BsaAI YACGTR 1 cut(s) 40
BsaJI CCNNGG 3 cut(s) 456, 694, 901
Bsc4I CCNNNNNNNGG 2 cut(s) 647, 696
Bse1I ACTGG 1 cut(s) 290
Bse21I CCTNAGG 1 cut(s) 765
BseBI CCWGG 3 cut(s) 648, 902, 976
BseDI CCNNGG 3 cut(s) 456, 694, 901
BseGI GGATG 5 cut(s) 106, 529, 667, 727, 760
BseLI CCNNNNNNNGG 2 cut(s) 647, 696
BseMII CTCAG 4 cut(s) 416, 545, 686, 918
BseNI ACTGG 1 cut(s) 290
BseSI GKGCMC 1 cut(s) 39
BseXI GCAGC 6 cut(s) 169, 275, 619, 711, 766, 788
Bsh1285I CGRYCG 1 cut(s) 917
BshFI GGCC 1 cut(s) 80
BshNI GGYRCC 1 cut(s) 384
BsiEI CGRYCG 1 cut(s) 917
BsiHKAI GWGCWC 1 cut(s) 983
BsiHKCI CYCGRG 1 cut(s) 988
BslFI GGGAC 2 cut(s) 61, 971
BslI CCNNNNNNNGG 2 cut(s) 647, 696
BsmAI GTCTC 4 cut(s) 170, 534, 548, 704
BsmFI GGGAC 2 cut(s) 61, 971
BsmI GAATGC 1 cut(s) 480
BsnI GGCC 1 cut(s) 80
BsoBI CYCGRG 1 cut(s) 988
Bsp119I TTCGAA 1 cut(s) 1005
Bsp1286I GDGCHC 2 cut(s) 39, 983
Bsp143I GATC 7 cut(s) 110, 337, 373, 481, 829, 890, 950
BspACI CCGC 3 cut(s) 77, 731, 994
BspANI GGCC 1 cut(s) 80
BspCNI CTCAG 4 cut(s) 417, 544, 685, 919
BspHI TCATGA 1 cut(s) 244
BspLI GGNNCC 1 cut(s) 386
BspMI ACCTGC 2 cut(s) 833, 925
BspPI GGATC 3 cut(s) 118, 476, 898
BspT104I TTCGAA 1 cut(s) 1005
BspT107I GGYRCC 1 cut(s) 384
BsrI ACTGG 1 cut(s) 290
BssECI CCNNGG 3 cut(s) 456, 694, 901
BssMI GATC 7 cut(s) 110, 337, 373, 481, 829, 890, 950
BssNAI GTATAC 1 cut(s) 216
BssT1I CCWWGG 2 cut(s) 456, 694
Bst1107I GTATAC 1 cut(s) 216
Bst2UI CCWGG 3 cut(s) 648, 902, 976
Bst4CI ACNGT 3 cut(s) 159, 662, 985
BstBAI YACGTR 1 cut(s) 40
BstBI TTCGAA 1 cut(s) 1005
BstDEI CTNAG 7 cut(s) 90, 425, 470, 531, 672, 765, 927
BstENI CCTNNNNNAGG 1 cut(s) 645
BstF5I GGATG 5 cut(s) 106, 529, 667, 727, 760
BstHHI GCGC 1 cut(s) 556
BstKTI GATC 7 cut(s) 113, 340, 376, 484, 832, 893, 953
BstMAI GTCTC 4 cut(s) 170, 534, 548, 704
BstMBI GATC 7 cut(s) 110, 337, 373, 481, 829, 890, 950
BstMCI CGRYCG 1 cut(s) 917
BstMWI GCNNNNNNNGC 6 cut(s) 86, 475, 584, 730, 776, 869
BstNI CCWGG 3 cut(s) 648, 902, 976
BstNSI RCATGY 1 cut(s) 704
BstSCI CCNGG 3 cut(s) 646, 900, 974
BstSFI CTRYAG 3 cut(s) 155, 858, 867
BstSLI GKGCMC 1 cut(s) 39
BstV1I GCAGC 6 cut(s) 169, 275, 619, 711, 766, 788
BstV2I GAAGAC 1 cut(s) 203
BstX2I RGATCY 4 cut(s) 110, 373, 481, 890
BstXI CCANNNNNNTGG 1 cut(s) 17
BstYI RGATCY 4 cut(s) 110, 373, 481, 890
BstZ17I GTATAC 1 cut(s) 216
Bsu36I CCTNAGG 1 cut(s) 765
BsuRI GGCC 1 cut(s) 80
BtsCI GGATG 5 cut(s) 106, 529, 667, 727, 760
BtsI GCAGTG 1 cut(s) 457
BtsIMutI CAGTG 2 cut(s) 457, 680
BveI ACCTGC 2 cut(s) 833, 925
CaiI CAGNNNCTG 2 cut(s) 296, 782
CciI TCATGA 1 cut(s) 244
CfoI GCGC 1 cut(s) 556
Cfr13I GGNCC 2 cut(s) 638, 793
CseI GACGC 1 cut(s) 335
Csp6I GTAC 2 cut(s) 385, 620
CviAII CATG 5 cut(s) 139, 245, 281, 416, 701
CviQI GTAC 2 cut(s) 385, 620
DdeI CTNAG 7 cut(s) 90, 425, 470, 531, 672, 765, 927
DpnI GATC 7 cut(s) 112, 339, 375, 483, 831, 892, 952
DpnII GATC 7 cut(s) 110, 337, 373, 481, 829, 890, 950
EaeI YGGCCR 1 cut(s) 78
Eco130I CCWWGG 2 cut(s) 456, 694
Eco47I GGWCC 2 cut(s) 638, 793
Eco57I CTGAAG 3 cut(s) 165, 335, 587
Eco72I CACGTG 1 cut(s) 40
Eco81I CCTNAGG 1 cut(s) 765
Eco88I CYCGRG 1 cut(s) 988
EcoNI CCTNNNNNAGG 1 cut(s) 645
EcoO109I RGGNCCY 1 cut(s) 638
EcoRI GAATTC 1 cut(s) 1007
EcoRII CCWGG 3 cut(s) 646, 900, 974
EcoT14I CCWWGG 2 cut(s) 456, 694
ErhI CCWWGG 2 cut(s) 456, 694
FaeI CATG 5 cut(s) 142, 248, 284, 419, 704
FaqI GGGAC 2 cut(s) 61, 971
FatI CATG 5 cut(s) 138, 244, 280, 415, 700
FbaI TGATCA 1 cut(s) 337
FblI GTMKAC 1 cut(s) 215
Fnu4HI GCNGC 8 cut(s) 78, 183, 264, 608, 725, 777, 780, 994
FokI GGATG 5 cut(s) 113, 536, 654, 714, 747
Fsp4HI GCNGC 8 cut(s) 78, 183, 264, 608, 725, 777, 780, 994
FspBI CTAG 7 cut(s) 63, 267, 404, 489, 570, 575, 948
GlaI GCGC 1 cut(s) 555
GluI GCNGC 8 cut(s) 78, 183, 264, 608, 725, 777, 780, 994
HaeIII GGCC 1 cut(s) 80
HgaI GACGC 1 cut(s) 335
HhaI GCGC 1 cut(s) 556
Hin1II CATG 5 cut(s) 142, 248, 284, 419, 704
Hin6I GCGC 1 cut(s) 554
HinP1I GCGC 1 cut(s) 554
HinfI GANTC 3 cut(s) 224, 364, 527
HphI GGTGA 3 cut(s) 298, 646, 890
Hpy166II GTNNAC 1 cut(s) 216
Hpy188I TCNGA 5 cut(s) 229, 342, 928, 955, 1013
Hpy188III TCNNGA 7 cut(s) 245, 361, 368, 424, 707, 948, 988
Hpy8I GTNNAC 1 cut(s) 216
HpyAV CCTTC 3 cut(s) 385, 391, 766
HpyCH4III ACNGT 3 cut(s) 159, 662, 985
HpyCH4IV ACGT 2 cut(s) 39, 200
HpyCH4V TGCA 5 cut(s) 185, 274, 354, 687, 727
HpyF10VI GCNNNNNNNGC 6 cut(s) 86, 475, 584, 730, 776, 869
HpyF3I CTNAG 7 cut(s) 90, 425, 470, 531, 672, 765, 927
HpySE526I ACGT 2 cut(s) 39, 200
Hsp92II CATG 5 cut(s) 142, 248, 284, 419, 704
HspAI GCGC 1 cut(s) 554
KpnI GGTACC 1 cut(s) 388
Ksp22I TGATCA 1 cut(s) 337
Kzo9I GATC 7 cut(s) 110, 337, 373, 481, 829, 890, 950
LmnI GCTCC 3 cut(s) 64, 400, 978
Lsp1109I GCAGC 6 cut(s) 169, 275, 619, 711, 766, 788
LweI GCATC 2 cut(s) 64, 736
MaeI CTAG 7 cut(s) 63, 267, 404, 489, 570, 575, 948
MaeII ACGT 2 cut(s) 39, 200
MaeIII GTNAC 1 cut(s) 850
MalI GATC 7 cut(s) 112, 339, 375, 483, 831, 892, 952
MboI GATC 7 cut(s) 110, 337, 373, 481, 829, 890, 950
MboII GAAGA 9 cut(s) 5, 83, 158, 179, 208, 328, 383, 593, 885
MfeI CAATTG 1 cut(s) 788
MflI RGATCY 4 cut(s) 110, 373, 481, 890
MhlI GDGCHC 2 cut(s) 39, 983
MluCI AATT 4 cut(s) 248, 333, 788, 1007
MlyI GAGTC 2 cut(s) 233, 536
MroXI GAANNNNTTC 1 cut(s) 411
MslI CAYNNNNRTG 2 cut(s) 15, 450
MspA1I CMGCKG 1 cut(s) 779
MspR9I CCNGG 3 cut(s) 648, 902, 976
MunI CAATTG 1 cut(s) 788
Mva1269I GAATGC 1 cut(s) 480
MvaI CCWGG 3 cut(s) 648, 902, 976
MwoI GCNNNNNNNGC 6 cut(s) 86, 475, 584, 730, 776, 869
NdeII GATC 7 cut(s) 110, 337, 373, 481, 829, 890, 950
NlaIII CATG 5 cut(s) 142, 248, 284, 419, 704
NlaIV GGNNCC 1 cut(s) 386
NspI RCATGY 1 cut(s) 704
NspV TTCGAA 1 cut(s) 1005
PagI TCATGA 1 cut(s) 244
PaqCI CACCTGC 1 cut(s) 833
PctI GAATGC 1 cut(s) 480
PdmI GAANNNNTTC 1 cut(s) 411
PfeI GAWTC 1 cut(s) 364
PkrI GCNGC 8 cut(s) 79, 184, 265, 609, 726, 778, 781, 995
PleI GAGTC 2 cut(s) 232, 535
PmaCI CACGTG 1 cut(s) 40
PmlI CACGTG 1 cut(s) 40
PpsI GAGTC 2 cut(s) 232, 535
Ppu21I YACGTR 1 cut(s) 40
PpuMI RGGWCCY 1 cut(s) 638
Psp5II RGGWCCY 1 cut(s) 638
Psp6I CCWGG 3 cut(s) 646, 900, 974
PspCI CACGTG 1 cut(s) 40
PspGI CCWGG 3 cut(s) 646, 900, 974
PspN4I GGNNCC 1 cut(s) 386
PspPI GGNCC 2 cut(s) 638, 793
PspPPI RGGWCCY 1 cut(s) 638
PstNI CAGNNNCTG 2 cut(s) 296, 782
PsuI RGATCY 4 cut(s) 110, 373, 481, 890
PvuII CAGCTG 1 cut(s) 779
RsaI GTAC 2 cut(s) 386, 621
RsaNI GTAC 2 cut(s) 385, 620
RseI CAYNNNNRTG 2 cut(s) 15, 450
SatI GCNGC 8 cut(s) 78, 183, 264, 608, 725, 777, 780, 994
Sau3AI GATC 7 cut(s) 110, 337, 373, 481, 829, 890, 950
Sau96I GGNCC 2 cut(s) 638, 793
SchI GAGTC 2 cut(s) 233, 536
ScrFI CCNGG 3 cut(s) 648, 902, 976
SduI GDGCHC 2 cut(s) 39, 983
SfaNI GCATC 2 cut(s) 64, 736
SfcI CTRYAG 3 cut(s) 155, 858, 867
SfuI TTCGAA 1 cut(s) 1005
SinI GGWCC 2 cut(s) 638, 793
SmiMI CAYNNNNRTG 2 cut(s) 15, 450
Sse9I AATT 4 cut(s) 248, 333, 788, 1007
SsiI CCGC 3 cut(s) 77, 731, 994
SspMI CTAG 7 cut(s) 63, 267, 404, 489, 570, 575, 948
StyD4I CCNGG 3 cut(s) 646, 900, 974
StyI CCWWGG 2 cut(s) 456, 694
TaaI ACNGT 3 cut(s) 159, 662, 985
TaiI ACGT 2 cut(s) 42, 203
TaqI TCGA 1 cut(s) 1005
TaqII GACCGA 1 cut(s) 903
TasI AATT 4 cut(s) 248, 333, 788, 1007
TauI GCSGC 2 cut(s) 80, 996
TfiI GAWTC 1 cut(s) 364
TscAI CASTG 2 cut(s) 457, 680
TseI GCWGC 6 cut(s) 182, 263, 607, 724, 776, 779
TspDTI ATGAA 3 cut(s) 233, 261, 404
TspRI CASTG 2 cut(s) 457, 680
VpaK11BI GGWCC 2 cut(s) 638, 793
XagI CCTNNNNNAGG 1 cut(s) 645
XapI RAATTY 1 cut(s) 1007
XbaI TCTAGA 1 cut(s) 947
XceI RCATGY 1 cut(s) 704
XmiI GTMKAC 1 cut(s) 215
XmnI GAANNNNTTC 1 cut(s) 411
XspI CTAG 7 cut(s) 63, 267, 404, 489, 570, 575, 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.