transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 110 |
| AciI | CCGC | 3 cut(s) | 335, 450, 828 |
| AclWI | GGATC | 5 cut(s) | 476, 528, 545, 558, 973 |
| AcsI | RAATTY | 1 cut(s) | 16 |
| AcuI | CTGAAG | 1 cut(s) | 828 |
| AfaI | GTAC | 1 cut(s) | 484 |
| AgeI | ACCGGT | 1 cut(s) | 155 |
| AgsI | TTSAA | 5 cut(s) | 236, 388, 460, 709, 757 |
| AjnI | CCWGG | 2 cut(s) | 267, 784 |
| AleI | CACNNNNGTG | 1 cut(s) | 778 |
| AluBI | AGCT | 7 cut(s) | 103, 599, 650, 760, 806, 849, 904 |
| AluI | AGCT | 7 cut(s) | 103, 599, 650, 760, 806, 849, 904 |
| Alw21I | GWGCWC | 2 cut(s) | 750, 946 |
| Alw26I | GTCTC | 3 cut(s) | 135, 311, 661 |
| AlwI | GGATC | 5 cut(s) | 476, 528, 545, 558, 973 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 653 |
| AoxI | GGCC | 2 cut(s) | 32, 782 |
| ApeKI | GCWGC | 3 cut(s) | 452, 650, 813 |
| ApoI | RAATTY | 1 cut(s) | 16 |
| AsiGI | ACCGGT | 1 cut(s) | 155 |
| AsuC2I | CCSGG | 1 cut(s) | 281 |
| AsuHPI | GGTGA | 1 cut(s) | 809 |
| AsuII | TTCGAA | 1 cut(s) | 683 |
| BamHI | GGATCC | 1 cut(s) | 550 |
| BanI | GGYRCC | 1 cut(s) | 110 |
| Bbv12I | GWGCWC | 2 cut(s) | 750, 946 |
| BbvI | GCAGC | 3 cut(s) | 439, 637, 825 |
| BccI | CCATC | 1 cut(s) | 101 |
| BceAI | ACGGC | 2 cut(s) | 406, 825 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 434, 468 |
| BciT130I | CCWGG | 2 cut(s) | 269, 786 |
| BclI | TGATCA | 1 cut(s) | 877 |
| BcnI | CCSGG | 1 cut(s) | 281 |
| BcoDI | GTCTC | 3 cut(s) | 135, 311, 661 |
| BfaI | CTAG | 2 cut(s) | 501, 873 |
| BisI | GCNGC | 3 cut(s) | 453, 651, 814 |
| BlsI | GCNGC | 3 cut(s) | 454, 652, 815 |
| Bme1390I | CCNGG | 3 cut(s) | 269, 281, 786 |
| BmiI | GGNNCC | 3 cut(s) | 112, 552, 839 |
| BmrFI | CCNGG | 3 cut(s) | 269, 281, 786 |
| BmsI | GCATC | 3 cut(s) | 232, 322, 358 |
| BpmI | CTGGAG | 2 cut(s) | 204, 251 |
| Bpu10I | CCTNAGC | 1 cut(s) | 988 |
| Bpu14I | TTCGAA | 1 cut(s) | 683 |
| BpuEI | CTTGAG | 1 cut(s) | 918 |
| BpuMI | CCSGG | 1 cut(s) | 281 |
| BsaBI | GATNNNNATC | 2 cut(s) | 414, 519 |
| BsaI | GGTCTC | 1 cut(s) | 135 |
| BsaJI | CCNNGG | 3 cut(s) | 279, 615, 776 |
| BsaWI | WCCGGW | 1 cut(s) | 155 |
| Bse118I | RCCGGY | 1 cut(s) | 155 |
| Bse1I | ACTGG | 2 cut(s) | 85, 187 |
| Bse8I | GATNNNNATC | 2 cut(s) | 414, 519 |
| BseBI | CCWGG | 2 cut(s) | 269, 786 |
| BseDI | CCNNGG | 3 cut(s) | 279, 615, 776 |
| BseGI | GGATG | 2 cut(s) | 337, 706 |
| BseJI | GATNNNNATC | 2 cut(s) | 414, 519 |
| BseMII | CTCAG | 1 cut(s) | 914 |
| BseNI | ACTGG | 2 cut(s) | 85, 187 |
| BseRI | GAGGAG | 1 cut(s) | 837 |
| BseXI | GCAGC | 3 cut(s) | 439, 637, 825 |
| BshFI | GGCC | 2 cut(s) | 34, 784 |
| BshNI | GGYRCC | 1 cut(s) | 110 |
| BshTI | ACCGGT | 1 cut(s) | 155 |
| BsiHKAI | GWGCWC | 2 cut(s) | 750, 946 |
| BsiSI | CCGG | 2 cut(s) | 156, 281 |
| BsmAI | GTCTC | 3 cut(s) | 135, 311, 661 |
| BsmBI | CGTCTC | 1 cut(s) | 311 |
| BsnI | GGCC | 2 cut(s) | 34, 784 |
| Bso31I | GGTCTC | 1 cut(s) | 135 |
| Bsp119I | TTCGAA | 1 cut(s) | 683 |
| Bsp1286I | GDGCHC | 2 cut(s) | 750, 946 |
| Bsp143I | GATC | 7 cut(s) | 254, 468, 520, 550, 608, 877, 965 |
| Bsp19I | CCATGG | 1 cut(s) | 615 |
| BspACI | CCGC | 3 cut(s) | 335, 450, 828 |
| BspANI | GGCC | 2 cut(s) | 34, 784 |
| BspCNI | CTCAG | 1 cut(s) | 913 |
| BspLI | GGNNCC | 3 cut(s) | 112, 552, 839 |
| BspPI | GGATC | 5 cut(s) | 476, 528, 545, 558, 973 |
| BspT104I | TTCGAA | 1 cut(s) | 683 |
| BspT107I | GGYRCC | 1 cut(s) | 110 |
| BspTNI | GGTCTC | 1 cut(s) | 135 |
| BsrFI | RCCGGY | 1 cut(s) | 155 |
| BsrI | ACTGG | 2 cut(s) | 85, 187 |
| BssAI | RCCGGY | 1 cut(s) | 155 |
| BssECI | CCNNGG | 3 cut(s) | 279, 615, 776 |
| BssMI | GATC | 7 cut(s) | 254, 468, 520, 550, 608, 877, 965 |
| BssT1I | CCWWGG | 2 cut(s) | 615, 776 |
| Bst2UI | CCWGG | 2 cut(s) | 269, 786 |
| Bst4CI | ACNGT | 1 cut(s) | 752 |
| Bst6I | CTCTTC | 1 cut(s) | 51 |
| BstBI | TTCGAA | 1 cut(s) | 683 |
| BstC8I | GCNNGC | 4 cut(s) | 321, 591, 946, 950 |
| BstDEI | CTNAG | 6 cut(s) | 99, 251, 675, 732, 900, 988 |
| BstDSI | CCRYGG | 1 cut(s) | 615 |
| BstF5I | GGATG | 2 cut(s) | 337, 706 |
| BstKTI | GATC | 7 cut(s) | 257, 471, 523, 553, 611, 880, 968 |
| BstMAI | GTCTC | 3 cut(s) | 135, 311, 661 |
| BstMBI | GATC | 7 cut(s) | 254, 468, 520, 550, 608, 877, 965 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 100, 846 |
| BstNI | CCWGG | 2 cut(s) | 269, 786 |
| BstNSI | RCATGY | 3 cut(s) | 323, 593, 740 |
| BstSCI | CCNGG | 3 cut(s) | 267, 279, 784 |
| BstV1I | GCAGC | 3 cut(s) | 439, 637, 825 |
| BstX2I | RGATCY | 2 cut(s) | 550, 965 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 121, 780 |
| BstYI | RGATCY | 2 cut(s) | 550, 965 |
| BsuRI | GGCC | 2 cut(s) | 34, 784 |
| BtgI | CCRYGG | 1 cut(s) | 615 |
| BtsCI | GGATG | 2 cut(s) | 337, 706 |
| BtsIMutI | CAGTG | 1 cut(s) | 748 |
| Cac8I | GCNNGC | 4 cut(s) | 321, 591, 946, 950 |
| CaiI | CAGNNNCTG | 1 cut(s) | 653 |
| Cfr10I | RCCGGY | 1 cut(s) | 155 |
| CseI | GACGC | 1 cut(s) | 293 |
| Csp6I | GTAC | 1 cut(s) | 483 |
| CspAI | ACCGGT | 1 cut(s) | 155 |
| CviAII | CATG | 7 cut(s) | 228, 258, 320, 430, 590, 616, 737 |
| CviQI | GTAC | 1 cut(s) | 483 |
| DdeI | CTNAG | 6 cut(s) | 99, 251, 675, 732, 900, 988 |
| DpnI | GATC | 7 cut(s) | 256, 470, 522, 552, 610, 879, 967 |
| DpnII | GATC | 7 cut(s) | 254, 468, 520, 550, 608, 877, 965 |
| Eam1104I | CTCTTC | 1 cut(s) | 51 |
| EarI | CTCTTC | 1 cut(s) | 51 |
| EciI | GGCGGA | 1 cut(s) | 843 |
| Eco130I | CCWWGG | 2 cut(s) | 615, 776 |
| Eco31I | GGTCTC | 1 cut(s) | 135 |
| Eco57I | CTGAAG | 1 cut(s) | 828 |
| EcoRII | CCWGG | 2 cut(s) | 267, 784 |
| EcoT14I | CCWWGG | 2 cut(s) | 615, 776 |
| EcoT22I | ATGCAT | 1 cut(s) | 583 |
| ErhI | CCWWGG | 2 cut(s) | 615, 776 |
| Esp3I | CGTCTC | 1 cut(s) | 311 |
| FaeI | CATG | 7 cut(s) | 231, 261, 323, 433, 593, 619, 740 |
| FatI | CATG | 7 cut(s) | 227, 257, 319, 429, 589, 615, 736 |
| FauNDI | CATATG | 1 cut(s) | 583 |
| FbaI | TGATCA | 1 cut(s) | 877 |
| Fnu4HI | GCNGC | 3 cut(s) | 453, 651, 814 |
| FokI | GGATG | 2 cut(s) | 344, 713 |
| Fsp4HI | GCNGC | 3 cut(s) | 453, 651, 814 |
| FspBI | CTAG | 2 cut(s) | 501, 873 |
| GluI | GCNGC | 3 cut(s) | 453, 651, 814 |
| GsuI | CTGGAG | 2 cut(s) | 204, 251 |
| HaeIII | GGCC | 2 cut(s) | 34, 784 |
| HapII | CCGG | 2 cut(s) | 156, 281 |
| HgaI | GACGC | 1 cut(s) | 293 |
| Hin1II | CATG | 7 cut(s) | 231, 261, 323, 433, 593, 619, 740 |
| HindIII | AAGCTT | 1 cut(s) | 101 |
| HinfI | GANTC | 1 cut(s) | 311 |
| HpaII | CCGG | 2 cut(s) | 156, 281 |
| HphI | GGTGA | 1 cut(s) | 809 |
| Hpy188I | TCNGA | 6 cut(s) | 168, 316, 691, 729, 882, 958 |
| Hpy188III | TCNNGA | 5 cut(s) | 68, 308, 472, 512, 935 |
| HpyAV | CCTTC | 4 cut(s) | 469, 632, 787, 803 |
| HpyCH4III | ACNGT | 1 cut(s) | 752 |
| HpyCH4IV | ACGT | 1 cut(s) | 481 |
| HpyCH4V | TGCA | 2 cut(s) | 581, 589 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 100, 846 |
| HpyF3I | CTNAG | 6 cut(s) | 99, 251, 675, 732, 900, 988 |
| HpySE526I | ACGT | 1 cut(s) | 481 |
| Hsp92II | CATG | 7 cut(s) | 231, 261, 323, 433, 593, 619, 740 |
| Ksp22I | TGATCA | 1 cut(s) | 877 |
| Kzo9I | GATC | 7 cut(s) | 254, 468, 520, 550, 608, 877, 965 |
| LmnI | GCTCC | 2 cut(s) | 837, 854 |
| Lsp1109I | GCAGC | 3 cut(s) | 439, 637, 825 |
| LweI | GCATC | 3 cut(s) | 232, 322, 358 |
| MaeI | CTAG | 2 cut(s) | 501, 873 |
| MaeII | ACGT | 1 cut(s) | 481 |
| MalI | GATC | 7 cut(s) | 256, 470, 522, 552, 610, 879, 967 |
| MboI | GATC | 7 cut(s) | 254, 468, 520, 550, 608, 877, 965 |
| MboII | GAAGA | 8 cut(s) | 12, 17, 38, 202, 248, 251, 861, 900 |
| MflI | RGATCY | 2 cut(s) | 550, 965 |
| MhlI | GDGCHC | 2 cut(s) | 750, 946 |
| MluCI | AATT | 5 cut(s) | 16, 25, 55, 115, 383 |
| MlyI | GAGTC | 1 cut(s) | 305 |
| MmeI | TCCRAC | 1 cut(s) | 146 |
| MnlI | CCTC | 7 cut(s) | 45, 349, 353, 571, 640, 815, 818 |
| Mph1103I | ATGCAT | 1 cut(s) | 583 |
| MseI | TTAA | 1 cut(s) | 507 |
| MslI | CAYNNNNRTG | 2 cut(s) | 620, 778 |
| MspA1I | CMGCKG | 2 cut(s) | 452, 650 |
| MspI | CCGG | 2 cut(s) | 156, 281 |
| MspR9I | CCNGG | 3 cut(s) | 269, 281, 786 |
| MvaI | CCWGG | 2 cut(s) | 269, 786 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 100, 846 |
| NciI | CCSGG | 1 cut(s) | 281 |
| NcoI | CCATGG | 1 cut(s) | 615 |
| NdeI | CATATG | 1 cut(s) | 583 |
| NdeII | GATC | 7 cut(s) | 254, 468, 520, 550, 608, 877, 965 |
| NlaIII | CATG | 7 cut(s) | 231, 261, 323, 433, 593, 619, 740 |
| NlaIV | GGNNCC | 3 cut(s) | 112, 552, 839 |
| NmeAIII | GCCGAG | 1 cut(s) | 10 |
| NsiI | ATGCAT | 1 cut(s) | 583 |
| NspI | RCATGY | 3 cut(s) | 323, 593, 740 |
| NspV | TTCGAA | 1 cut(s) | 683 |
| OliI | CACNNNNGTG | 1 cut(s) | 778 |
| PaeI | GCATGC | 2 cut(s) | 323, 593 |
| PinAI | ACCGGT | 1 cut(s) | 155 |
| PkrI | GCNGC | 3 cut(s) | 454, 652, 815 |
| PleI | GAGTC | 1 cut(s) | 305 |
| PpsI | GAGTC | 1 cut(s) | 305 |
| Psp6I | CCWGG | 2 cut(s) | 267, 784 |
| PspGI | CCWGG | 2 cut(s) | 267, 784 |
| PspN4I | GGNNCC | 3 cut(s) | 112, 552, 839 |
| PstNI | CAGNNNCTG | 1 cut(s) | 653 |
| PsuI | RGATCY | 2 cut(s) | 550, 965 |
| PvuII | CAGCTG | 1 cut(s) | 650 |
| RsaI | GTAC | 1 cut(s) | 484 |
| RsaNI | GTAC | 1 cut(s) | 483 |
| RseI | CAYNNNNRTG | 2 cut(s) | 620, 778 |
| SaqAI | TTAA | 1 cut(s) | 507 |
| SatI | GCNGC | 3 cut(s) | 453, 651, 814 |
| Sau3AI | GATC | 7 cut(s) | 254, 468, 520, 550, 608, 877, 965 |
| SchI | GAGTC | 1 cut(s) | 305 |
| ScrFI | CCNGG | 3 cut(s) | 269, 281, 786 |
| SduI | GDGCHC | 2 cut(s) | 750, 946 |
| SfaNI | GCATC | 3 cut(s) | 232, 322, 358 |
| SfuI | TTCGAA | 1 cut(s) | 683 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 620, 778 |
| SmlI | CTYRAG | 1 cut(s) | 933 |
| SmoI | CTYRAG | 1 cut(s) | 933 |
| SphI | GCATGC | 2 cut(s) | 323, 593 |
| Sse9I | AATT | 5 cut(s) | 16, 25, 55, 115, 383 |
| SsiI | CCGC | 3 cut(s) | 335, 450, 828 |
| SspMI | CTAG | 2 cut(s) | 501, 873 |
| StyD4I | CCNGG | 3 cut(s) | 267, 279, 784 |
| StyI | CCWWGG | 2 cut(s) | 615, 776 |
| TaaI | ACNGT | 1 cut(s) | 752 |
| TaiI | ACGT | 1 cut(s) | 484 |
| TaqI | TCGA | 3 cut(s) | 309, 471, 683 |
| TasI | AATT | 5 cut(s) | 16, 25, 55, 115, 383 |
| Tru1I | TTAA | 1 cut(s) | 507 |
| Tru9I | TTAA | 1 cut(s) | 507 |
| TscAI | CASTG | 1 cut(s) | 755 |
| TseI | GCWGC | 3 cut(s) | 452, 650, 813 |
| TspDTI | ATGAA | 4 cut(s) | 92, 211, 396, 446 |
| TspRI | CASTG | 1 cut(s) | 755 |
| XapI | RAATTY | 1 cut(s) | 16 |
| XceI | RCATGY | 3 cut(s) | 323, 593, 740 |
| XspI | CTAG | 2 cut(s) | 501, 873 |
| Zsp2I | ATGCAT | 1 cut(s) | 583 |