Rw0G001150
RLK Family

cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00036
OG0000146
Physical Location & Seq
Reverse (-)
167066 .. 168564
1499 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G001150.1

Sequence Viewer

Length: 1179 bp
ATGGTGGACTTGAAGATCACTGATGGGAAAAGTGAGTCTGGAGAGACAAGTTTTGTGGCCCGTGAGGTCGTCATTGTTCAGAATGTCACAGATAACTCAAGTTTTGGCGTCAAACTTGATGGTACCAATTATCAGTTATGGCAGAAACTTATGAAGATCCATATTCAGGGGATTGGAAAGTGGAGTTATGTTACCGGTAGTGCAGCAAGACCTATTGCAGGTCAAAAAGCTGATGAATGGGATACGACAAATAATAATGTGATGGGAATTCTTCTCAAAGCTATGACTCCAGAGGTGATGAGATTATTTGCTAACTATGATTCTCCCAAAGCAATTTGGGATTCTGTTGCTGCTACATATTATGATGGGAGTGATTTTGCTCGTGTTCATGAATTGCATGTCAAAGCTTTCAAAATAACTCAGAGTGGACAGCCTGTTGCAACTTTTTATGCAAATTTAAAGACAATTTGGCAGGAGCTTGATCAGAGGAACTCTAATCCTATGACTTGTGAAGCGGATATTAATTCCTATCAGAATGAGCAGGACAAGATGCGTGTCCATATTTTTCTTGCTGGCTTGGACCCTCACTTTGAAGGGGCAAAGAATGAGTTATTGCGTCTTGCAACTCCACCTACGTTGGAGCAAGCCTTTGCTTATATCCGAAGAGATGAAGGTAACAAGGCTGCCGCTCAGAACCTTCATACTGAAATTTCTAGTTTGGCTATCCATGCAGCATCCCCATCTACCCTAGTTCCTTCTCAAACCCAGTATCAACCACGGACTCAGGGATATCAGCAGAATCAGAATTATAACCAAATGACTTGTAACTATTGCAAGGAAGCTGGACATTTCAAGAATCAATGCCCTAAGCTACGAAGGTTTAATTATAGCAACTCTGGTTGGAAAGGAGGCAATAATTTTGGAGGTCGTGGAGGACGTGGTGGTGGTCAAAGAGGCAAAGCTGCAATTCAATTAGTGCCAGAACCTGACTTCTATAGCATTGAGGGACAAGATCCCTCAAAGGGTAATGTTTCATTGACTAAGGAAACTCGAGAATATGTGCACCAGGGTGATCATGGGCAAGGGAGACCTGAGGGGAAGACTGTTTCACTTGGATTGCATGTACGCAGAGCCAATACAAGCACCGGAACTACCTTTGGCCCTGACATTGAATTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_2 Retrotran_gag_3 Retrotrans_gag gag_pre-integrs rve

Protein Analysis

392

Amino Acids

43.58

Weight (kDa)

8.2

Isoelectric Point (pI)

32.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 52 - 164 1.2e-06 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000146)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19561 FvH4_1g25371 FvH4_1g25961 FvH4_2g00352 FvH4_2g00861 FvH4_2g04952 FvH4_2g05413 FvH4_2g07531 FvH4_2g08961 FvH4_2g25141 FvH4_2g27292 FvH4_3g18164 FvH4_3g19921 FvH4_3g43870 FvH4_4g14441 FvH4_4g15581 FvH4_4g15582 FvH4_4g16890 FvH4_4g19782 FvH4_4g33444 FvH4_4g33921 FvH4_5g22281 FvH4_5g22282 FvH4_5g32571 FvH4_5g37451 FvH4_5g39631 FvH4_6g04721 FvH4_6g11661 FvH4_6g20571 FvH4_6g32791 FvH4_7g23184
prunus_persica Prupe.1G090900_v2.0.a1 Prupe.1G241200_v2.0.a1 Prupe.1G534100_v2.0.a1 Prupe.3G076700_v2.0.a1 Prupe.4G150800_v2.0.a1 Prupe.4G181800_v2.0.a1 Prupe.4G240900_v2.0.a1 Prupe.4G247600_v2.0.a1 Prupe.6G115900_v2.0.a1 Prupe.6G327500_v2.0.a1 Prupe.8G071700_v2.0.a1
pyrus_communis pycom06g11480 pycom10g08330 pycom15g04320 pycom15g04350 pycom15g12620 pycom2874g00060
rosa_chinensis RchiOBHm_Chr1g0317241 RchiOBHm_Chr1g0341801 RchiOBHm_Chr1g0341931 RchiOBHm_Chr1g0359621 RchiOBHm_Chr2g0113741 RchiOBHm_Chr2g0117261 RchiOBHm_Chr2g0138831 RchiOBHm_Chr2g0141421 RchiOBHm_Chr2g0145281 RchiOBHm_Chr2g0152991 RchiOBHm_Chr3g0448001 RchiOBHm_Chr3g0450981 RchiOBHm_Chr3g0455161 RchiOBHm_Chr3g0457401 RchiOBHm_Chr3g0460001 RchiOBHm_Chr4g0387431 RchiOBHm_Chr4g0388741 RchiOBHm_Chr4g0444201 RchiOBHm_Chr4g0444261 RchiOBHm_Chr5g0010221 RchiOBHm_Chr6g0271721 RchiOBHm_Chr6g0274641 RchiOBHm_Chr6g0294691 RchiOBHm_Chr7g0237031 RchiOBHm_Chr7g0238461 RchiOBHm_Chr7g0239981
rosa_laevigata RLG00000009017
rosa_multiflora Rmu_co7986768.1_g000001 Rmu_co8302239.1_g000001 Rmu_co8485799.1_g000001 Rmu_sc0000061.1_g000013 Rmu_sc0000303.1_g000034 Rmu_sc0000303.1_g000035 Rmu_sc0000315.1_g000017 Rmu_sc0000349.1_g000003 Rmu_sc0000498.1_g000068 Rmu_sc0000508.1_g000014 Rmu_sc0000602.1_g000001 Rmu_sc0000633.1_g000002 Rmu_sc0000638.1_g000030 Rmu_sc0000756.1_g000016 Rmu_sc0000756.1_g000017 Rmu_sc0000785.1_g000037 Rmu_sc0000795.1_g000017 Rmu_sc0000796.1_g000030 Rmu_sc0000863.1_g000023 Rmu_sc0000920.1_g000021 Rmu_sc0000960.1_g000015 Rmu_sc0000982.1_g000102 Rmu_sc0001036.1_g000008 Rmu_sc0001036.1_g000009 Rmu_sc0001643.1_g000029 Rmu_sc0001687.1_g000026 Rmu_sc0001708.1_g000037 Rmu_sc0001768.1_g000015 Rmu_sc0001790.1_g000022 Rmu_sc0002180.1_g000007 Rmu_sc0002211.1_g000006 Rmu_sc0002270.1_g000010 Rmu_sc0002404.1_g000031 Rmu_sc0002858.1_g000016 Rmu_sc0003063.1_g000028 Rmu_sc0003730.1_g000017 Rmu_sc0004087.1_g000020 Rmu_sc0004618.1_g000048 Rmu_sc0004724.1_g000005 Rmu_sc0005167.1_g000036 Rmu_sc0005781.1_g000003 Rmu_sc0005878.1_g000012 Rmu_sc0006011.1_g000003 Rmu_sc0006343.1_g000011 Rmu_sc0006573.1_g000007 Rmu_sc0006599.1_g000007 Rmu_sc0006803.1_g000014 Rmu_sc0006836.1_g000002 Rmu_sc0006849.1_g000002 Rmu_sc0007109.1_g000009 Rmu_sc0009268.1_g000016 Rmu_sc0009618.1_g000017 Rmu_sc0009674.1_g000009 Rmu_sc0010244.1_g000009 Rmu_sc0011151.1_g000004 Rmu_sc0011356.1_g000001 Rmu_sc0011674.1_g000002 Rmu_sc0011778.1_g000016 Rmu_sc0012342.1_g000001 Rmu_sc0012467.1_g000002 Rmu_sc0012574.1_g000003 Rmu_sc0012913.1_g000005 Rmu_sc0013612.1_g000020 Rmu_sc0014824.1_g000001 Rmu_sc0017869.1_g000002 Rmu_sc0018085.1_g000003 Rmu_sc0024789.1_g000001 Rmu_sc0025106.1_g000013 Rmu_sc0034502.1_g000001 Rmu_sc0034547.1_g000001 Rmu_sc0035094.1_g000001 Rmu_sc0035095.1_g000001 Rmu_ssc0000100.1_g000027 Rmu_ssc0000244.1_g000005 Rmu_ssc0000371.1_g000029 Rmu_ssc0000381.1_g000004
rosa_roxburghii Rroxscaffold_1G00015480 Rroxscaffold_1G00023580 Rroxscaffold_1G00039340 Rroxscaffold_1G00047080 Rroxscaffold_2G00095820 Rroxscaffold_2G00125200 Rroxscaffold_2G00128330 Rroxscaffold_3G00270860
rosa_rugosa Rorug06G0120700
rosa_samantha Rh3BG173100 Rh6AG089600 Rh7AG488100 Rh7DG389600
rosa_wichuraiana Rw0G001150 Rw0G001990 Rw0G002010 Rw0G019540 Rw1G013730 Rw1G024110 Rw1G029190 Rw2G018850 Rw2G021090 Rw2G022260 Rw2G023180 Rw2G027280 Rw3G010190 Rw3G020660 Rw3G029380 Rw4G002390 Rw4G002690 Rw4G033260 Rw5G011960 Rw5G023110 Rw5G025250 Rw5G028950 Rw5G033740 Rw5G033950 Rw5G037900 Rw6G009640 Rw6G011620 Rw6G027720 Rw7G010680 Rw7G042070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 810
Acc36I ACCTGC 1 cut(s) 209
Acc65I GGTACC 1 cut(s) 122
AccB1I GGYRCC 1 cut(s) 122
AccBSI CCGCTC 1 cut(s) 689
AciI CCGC 2 cut(s) 515, 687
AclWI GGATC 2 cut(s) 151, 1007
AcsI RAATTY 4 cut(s) 267, 454, 708, 1172
AcyI GRCGYC 1 cut(s) 108
AfaI GTAC 2 cut(s) 124, 1125
AfiI CCNNNNNNNGG 3 cut(s) 166, 218, 1022
AgeI ACCGGT 1 cut(s) 194
AgsI TTSAA 6 cut(s) 13, 412, 593, 853, 971, 1172
AjiI CACGTC 1 cut(s) 938
AjnI CCWGG 1 cut(s) 1065
AleI CACNNNNGTG 1 cut(s) 1068
AluBI AGCT 7 cut(s) 230, 281, 407, 478, 842, 871, 962
AluI AGCT 7 cut(s) 230, 281, 407, 478, 842, 871, 962
Alw21I GWGCWC 1 cut(s) 1065
Alw26I GTCTC 2 cut(s) 38, 1081
Alw44I GTGCAC 1 cut(s) 1061
AlwI GGATC 2 cut(s) 151, 1007
AlwNI CAGNNNCTG 1 cut(s) 986
Ama87I CYCGRG 1 cut(s) 1050
AoxI GGCC 2 cut(s) 57, 1159
ApaLI GTGCAC 1 cut(s) 1061
ApeKI GCWGC 5 cut(s) 203, 350, 683, 731, 962
ApoI RAATTY 4 cut(s) 267, 454, 708, 1172
ArsI GACNNNNNNTTYG 2 cut(s) 572, 604
AseI ATTAAT 1 cut(s) 522
AsiGI ACCGGT 1 cut(s) 194
Asp718I GGTACC 1 cut(s) 122
AspS9I GGNCC 3 cut(s) 58, 580, 1160
AsuHPI GGTGA 2 cut(s) 307, 1082
AvaI CYCGRG 1 cut(s) 1050
AvaII GGWCC 1 cut(s) 580
AxyI CCTNAGG 1 cut(s) 1092
BaeGI GKGCMC 1 cut(s) 1065
BanI GGYRCC 1 cut(s) 122
BauI CACGAG 1 cut(s) 381
BbsI GAAGAC 1 cut(s) 1106
Bbv12I GWGCWC 1 cut(s) 1065
BbvI GCAGC 5 cut(s) 215, 337, 670, 743, 949
BccI CCATC 5 cut(s) 17, 113, 256, 359, 748
BciT130I CCWGG 1 cut(s) 1067
BciVI GTATCC 1 cut(s) 235
BclI TGATCA 2 cut(s) 481, 1072
BcoDI GTCTC 2 cut(s) 38, 1081
BfaI CTAG 2 cut(s) 714, 749
BfmI CTRYAG 1 cut(s) 994
BfuAI ACCTGC 1 cut(s) 209
BfuI GTATCC 1 cut(s) 235
BisI GCNGC 6 cut(s) 204, 351, 684, 687, 732, 963
BlsI GCNGC 6 cut(s) 205, 352, 685, 688, 733, 964
Bme1390I CCNGG 1 cut(s) 1067
Bme18I GGWCC 1 cut(s) 580
BmeT110I CYCGRG 1 cut(s) 1050
BmgBI CACGTC 1 cut(s) 938
BmgT120I GGNCC 3 cut(s) 58, 580, 1160
BmiI GGNNCC 2 cut(s) 124, 582
BmrFI CCNGG 1 cut(s) 1067
BmrI ACTGGG 1 cut(s) 760
BmsI GCATC 2 cut(s) 540, 743
BmuI ACTGGG 1 cut(s) 760
BpiI GAAGAC 1 cut(s) 1106
BpmI CTGGAG 2 cut(s) 60, 273
Bpu10I CCTNAGC 1 cut(s) 867
BpuEI CTTGAG 1 cut(s) 82
BsaHI GRCGYC 1 cut(s) 108
BsaI GGTCTC 1 cut(s) 1081
BsaJI CCNNGG 2 cut(s) 776, 1066
BsaWI WCCGGW 2 cut(s) 194, 1145
Bsc4I CCNNNNNNNGG 3 cut(s) 166, 218, 1022
Bse118I RCCGGY 1 cut(s) 194
Bse1I ACTGG 1 cut(s) 766
Bse21I CCTNAGG 1 cut(s) 1092
BseBI CCWGG 1 cut(s) 1067
BseDI CCNNGG 2 cut(s) 776, 1066
BseGI GGATG 1 cut(s) 734
BseLI CCNNNNNNNGG 3 cut(s) 166, 218, 1022
BseMII CTCAG 4 cut(s) 434, 704, 797, 1083
BseNI ACTGG 1 cut(s) 766
BseSI GKGCMC 1 cut(s) 1065
BseXI GCAGC 5 cut(s) 215, 337, 670, 743, 949
BsgI GTGCAG 1 cut(s) 222
BshFI GGCC 2 cut(s) 59, 1161
BshNI GGYRCC 1 cut(s) 122
BshTI ACCGGT 1 cut(s) 194
BsiHKAI GWGCWC 1 cut(s) 1065
BsiHKCI CYCGRG 1 cut(s) 1050
BsiSI CCGG 2 cut(s) 195, 1146
BslFI GGGAC 1 cut(s) 1020
BslI CCNNNNNNNGG 3 cut(s) 166, 218, 1022
BsmAI GTCTC 2 cut(s) 38, 1081
BsmFI GGGAC 1 cut(s) 1020
BsnI GGCC 2 cut(s) 59, 1161
Bso31I GGTCTC 1 cut(s) 1081
BsoBI CYCGRG 1 cut(s) 1050
Bsp1286I GDGCHC 1 cut(s) 1065
Bsp143I GATC 5 cut(s) 15, 156, 481, 1012, 1072
BspACI CCGC 2 cut(s) 515, 687
BspANI GGCC 2 cut(s) 59, 1161
BspCNI CTCAG 4 cut(s) 433, 703, 796, 1084
BspHI TCATGA 1 cut(s) 388
BspLI GGNNCC 2 cut(s) 124, 582
BspMI ACCTGC 1 cut(s) 209
BspPI GGATC 2 cut(s) 151, 1007
BspT107I GGYRCC 1 cut(s) 122
BspTNI GGTCTC 1 cut(s) 1081
BsrBI CCGCTC 1 cut(s) 689
BsrFI RCCGGY 1 cut(s) 194
BsrI ACTGG 1 cut(s) 766
BssAI RCCGGY 1 cut(s) 194
BssECI CCNNGG 2 cut(s) 776, 1066
BssMI GATC 5 cut(s) 15, 156, 481, 1012, 1072
BssNI GRCGYC 1 cut(s) 108
BssSI CACGAG 1 cut(s) 381
Bst2BI CACGAG 1 cut(s) 381
Bst2UI CCWGG 1 cut(s) 1067
Bst4CI ACNGT 1 cut(s) 1105
Bst6I CTCTTC 1 cut(s) 658
BstACI GRCGYC 1 cut(s) 108
BstC8I GCNNGC 2 cut(s) 574, 645
BstDEI CTNAG 6 cut(s) 420, 690, 783, 867, 1041, 1092
BstDSI CCRYGG 1 cut(s) 776
BstENI CCTNNNNNAGG 1 cut(s) 216
BstF5I GGATG 1 cut(s) 734
BstKTI GATC 5 cut(s) 18, 159, 484, 1015, 1075
BstMAI GTCTC 2 cut(s) 38, 1081
BstMBI GATC 5 cut(s) 15, 156, 481, 1012, 1072
BstMWI GCNNNNNNNGC 1 cut(s) 728
BstNI CCWGG 1 cut(s) 1067
BstNSI RCATGY 2 cut(s) 401, 1124
BstSCI CCNGG 1 cut(s) 1065
BstSFI CTRYAG 1 cut(s) 994
BstSLI GKGCMC 1 cut(s) 1065
BstV1I GCAGC 5 cut(s) 215, 337, 670, 743, 949
BstV2I GAAGAC 1 cut(s) 1106
BstX2I RGATCY 2 cut(s) 156, 1012
BstYI RGATCY 2 cut(s) 156, 1012
Bsu36I CCTNAGG 1 cut(s) 1092
BsuI GTATCC 1 cut(s) 235
BsuRI GGCC 2 cut(s) 59, 1161
BtgI CCRYGG 1 cut(s) 776
BtrI CACGTC 1 cut(s) 938
BtsCI GGATG 1 cut(s) 734
BtsIMutI CAGTG 1 cut(s) 18
BveI ACCTGC 1 cut(s) 209
Cac8I GCNNGC 2 cut(s) 574, 645
CaiI CAGNNNCTG 1 cut(s) 986
CciI TCATGA 1 cut(s) 388
Cfr10I RCCGGY 1 cut(s) 194
Cfr13I GGNCC 3 cut(s) 58, 580, 1160
CseI GACGC 2 cut(s) 97, 605
Csp6I GTAC 2 cut(s) 123, 1124
CspAI ACCGGT 1 cut(s) 194
CspCI CAANNNNNGTGG 4 cut(s) 36, 71, 618, 653
CviAII CATG 5 cut(s) 389, 398, 728, 1076, 1121
CviQI GTAC 2 cut(s) 123, 1124
DdeI CTNAG 6 cut(s) 420, 690, 783, 867, 1041, 1092
DpnI GATC 5 cut(s) 17, 158, 483, 1014, 1074
DpnII GATC 5 cut(s) 15, 156, 481, 1012, 1072
DraI TTTAAA 1 cut(s) 459
Eam1104I CTCTTC 1 cut(s) 658
EarI CTCTTC 1 cut(s) 658
Eco31I GGTCTC 1 cut(s) 1081
Eco32I GATATC 1 cut(s) 791
Eco47I GGWCC 1 cut(s) 580
Eco81I CCTNAGG 1 cut(s) 1092
Eco88I CYCGRG 1 cut(s) 1050
EcoNI CCTNNNNNAGG 1 cut(s) 216
EcoRI GAATTC 2 cut(s) 267, 1172
EcoRII CCWGG 1 cut(s) 1065
EcoRV GATATC 1 cut(s) 791
FaeI CATG 5 cut(s) 392, 401, 731, 1079, 1124
FaqI GGGAC 1 cut(s) 1020
FatI CATG 5 cut(s) 388, 397, 727, 1075, 1120
FbaI TGATCA 2 cut(s) 481, 1072
Fnu4HI GCNGC 6 cut(s) 204, 351, 684, 687, 732, 963
FokI GGATG 1 cut(s) 721
Fsp4HI GCNGC 6 cut(s) 204, 351, 684, 687, 732, 963
FspBI CTAG 2 cut(s) 714, 749
GluI GCNGC 6 cut(s) 204, 351, 684, 687, 732, 963
GsuI CTGGAG 2 cut(s) 60, 273
HaeIII GGCC 2 cut(s) 59, 1161
HapII CCGG 2 cut(s) 195, 1146
HgaI GACGC 2 cut(s) 97, 605
Hin1I GRCGYC 1 cut(s) 108
Hin1II CATG 5 cut(s) 392, 401, 731, 1079, 1124
HindIII AAGCTT 1 cut(s) 405
HinfI GANTC 7 cut(s) 35, 286, 320, 341, 781, 799, 856
HpaII CCGG 2 cut(s) 195, 1146
HphI GGTGA 2 cut(s) 307, 1082
Hpy166II GTNNAC 3 cut(s) 7, 428, 1063
Hpy188I TCNGA 8 cut(s) 81, 423, 486, 534, 662, 693, 804, 1178
Hpy188III TCNNGA 5 cut(s) 39, 290, 389, 853, 1052
Hpy8I GTNNAC 3 cut(s) 7, 428, 1063
HpyAV CCTTC 5 cut(s) 587, 665, 707, 765, 870
HpyCH4III ACNGT 1 cut(s) 1105
HpyCH4IV ACGT 2 cut(s) 635, 937
HpyF10VI GCNNNNNNNGC 1 cut(s) 728
HpyF3I CTNAG 6 cut(s) 420, 690, 783, 867, 1041, 1092
HpySE526I ACGT 2 cut(s) 635, 937
Hsp92I GRCGYC 1 cut(s) 108
Hsp92II CATG 5 cut(s) 392, 401, 731, 1079, 1124
KpnI GGTACC 1 cut(s) 126
Ksp22I TGATCA 2 cut(s) 481, 1072
Kzo9I GATC 5 cut(s) 15, 156, 481, 1012, 1072
LmnI GCTCC 2 cut(s) 475, 640
Lsp1109I GCAGC 5 cut(s) 215, 337, 670, 743, 949
LweI GCATC 2 cut(s) 540, 743
MaeI CTAG 2 cut(s) 714, 749
MaeII ACGT 2 cut(s) 635, 937
MaeIII GTNAC 4 cut(s) 85, 190, 674, 824
MalI GATC 5 cut(s) 17, 158, 483, 1014, 1074
MbiI CCGCTC 1 cut(s) 689
MboI GATC 5 cut(s) 15, 156, 481, 1012, 1072
MboII GAAGA 5 cut(s) 25, 166, 263, 675, 1111
MflI RGATCY 2 cut(s) 156, 1012
MhlI GDGCHC 1 cut(s) 1065
MlyI GAGTC 3 cut(s) 44, 280, 775
MmeI TCCRAC 2 cut(s) 618, 881
MseI TTAA 3 cut(s) 458, 522, 882
MslI CAYNNNNRTG 1 cut(s) 1068
MspI CCGG 2 cut(s) 195, 1146
MspR9I CCNGG 1 cut(s) 1067
MvaI CCWGG 1 cut(s) 1067
MwoI GCNNNNNNNGC 1 cut(s) 728
NdeII GATC 5 cut(s) 15, 156, 481, 1012, 1072
NlaIII CATG 5 cut(s) 392, 401, 731, 1079, 1124
NlaIV GGNNCC 2 cut(s) 124, 582
NmuCI GTSAC 1 cut(s) 85
NspI RCATGY 2 cut(s) 401, 1124
OliI CACNNNNGTG 1 cut(s) 1068
PaeR7I CTCGAG 1 cut(s) 1050
PagI TCATGA 1 cut(s) 388
PcsI WCGNNNNNNNCGW 1 cut(s) 934
PfeI GAWTC 4 cut(s) 320, 341, 799, 856
PinAI ACCGGT 1 cut(s) 194
PkrI GCNGC 6 cut(s) 205, 352, 685, 688, 733, 964
PleI GAGTC 3 cut(s) 43, 280, 775
PpsI GAGTC 3 cut(s) 43, 280, 775
PshBI ATTAAT 1 cut(s) 522
PsiI TTATAA 1 cut(s) 810
Psp6I CCWGG 1 cut(s) 1065
PspGI CCWGG 1 cut(s) 1065
PspN4I GGNNCC 2 cut(s) 124, 582
PspPI GGNCC 3 cut(s) 58, 580, 1160
PstNI CAGNNNCTG 1 cut(s) 986
PsuI RGATCY 2 cut(s) 156, 1012
RsaI GTAC 2 cut(s) 124, 1125
RsaNI GTAC 2 cut(s) 123, 1124
RseI CAYNNNNRTG 1 cut(s) 1068
SaqAI TTAA 3 cut(s) 458, 522, 882
SatI GCNGC 6 cut(s) 204, 351, 684, 687, 732, 963
Sau3AI GATC 5 cut(s) 15, 156, 481, 1012, 1072
Sau96I GGNCC 3 cut(s) 58, 580, 1160
SchI GAGTC 3 cut(s) 44, 280, 775
ScrFI CCNGG 1 cut(s) 1067
SduI GDGCHC 1 cut(s) 1065
SfaNI GCATC 2 cut(s) 540, 743
SfcI CTRYAG 1 cut(s) 994
Sfr274I CTCGAG 1 cut(s) 1050
SinI GGWCC 1 cut(s) 580
SlaI CTCGAG 1 cut(s) 1050
SmiMI CAYNNNNRTG 1 cut(s) 1068
SmlI CTYRAG 2 cut(s) 97, 1050
SmoI CTYRAG 2 cut(s) 97, 1050
SsiI CCGC 2 cut(s) 515, 687
SspMI CTAG 2 cut(s) 714, 749
StyD4I CCNGG 1 cut(s) 1065
TaaI ACNGT 1 cut(s) 1105
TaiI ACGT 2 cut(s) 638, 940
TaqI TCGA 1 cut(s) 1051
TauI GCSGC 1 cut(s) 689
TfiI GAWTC 4 cut(s) 320, 341, 799, 856
Tru1I TTAA 3 cut(s) 458, 522, 882
Tru9I TTAA 3 cut(s) 458, 522, 882
TscAI CASTG 1 cut(s) 25
TseFI GTSAC 1 cut(s) 85
TseI GCWGC 5 cut(s) 203, 350, 683, 731, 962
Tsp45I GTSAC 1 cut(s) 85
TspDTI ATGAA 7 cut(s) 167, 249, 377, 405, 684, 689, 1023
TspGWI ACGGA 1 cut(s) 793
TspRI CASTG 1 cut(s) 25
VneI GTGCAC 1 cut(s) 1061
VpaK11BI GGWCC 1 cut(s) 580
VspI ATTAAT 1 cut(s) 522
XagI CCTNNNNNAGG 1 cut(s) 216
XapI RAATTY 4 cut(s) 267, 454, 708, 1172
XceI RCATGY 2 cut(s) 401, 1124
XcmI CCANNNNNNNNNTGG 1 cut(s) 1073
XhoI CTCGAG 1 cut(s) 1050
XspI CTAG 2 cut(s) 714, 749
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.