RchiOBHm_Chr3g0450981

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000146
Physical Location & Seq
Reverse (-)
2268848 .. 2270388
1541 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ41829

Sequence Viewer

Length: 1116 bp
ATGGTTGACGACGGAAACCCACAACAAATCTTTCCACCTCCATCATCATCTGCATCGTCAACCCCACCAATTGTTCATGTTCAGTATCACAGTGACAATTCACCATTTCCTACCGGCGTTATCCTGGATGAAACCAATTATTCTCTTTGGTCTCAAGTCATGGAGATGCGTATTGGTGCGCGCAACAAAGCCAGCTACCTTACCGGCACAGCCATCAAACCAGCACCCGGAGAATCCAACTATGATACGTGGGTTACTGACAACCACAAAGTCAAAAGCTGGCTTATTGATTCAATGATTCCATCACTGATGCAGAGATTCATTCGTCTTGGCACAGCTCAAGAAATCTGGAAAGCTGTTTCCAAAACCTTTTATGATGGGTCTGATGAGACCCGCATTTTTGAGTTGAACCGGAAATCATTCACCACTCTACAGAATTGTAGACCTCTCTCTACATATTATAATGAATTGATTGCTATTTTTCAAGAAATTGATCATAGGAGCACAACTCAAGAAGACACGGTGGAAGGAGTTATTCAGCTCAGCACTTCAATGCAAAGACTGCGGGTTCATATCTTCTTGAGTGGTCTTGATTCAGACTTTGACCAGGTACGTGGAGAAATTTTGCGGAAGGAACCAAAGCTGGATCTTGAAAGCAGTTATGCCTATGTGCGTATGGTGGAGCAACAAAAGAAGACTATGGGAAATTCTTCAGTGAATACAGAAAGTACAGTTATGGCTGTCAATAGACTTAACCTGGAGGGCTCCGCTGCAATTACCAATCGTCCTAGACAAGGCCCACCTCCAGGATTCCCACAAACAAAACCCGGAGCTTCTCAACAAAGTTTTCAGCCTCGGAATAGCTCTTTCATACGACCCGGTGGTTTGGTGTGTCACCATTGTGGGGAAGCTGGTCACTCTAAGTGGAAATGTTATGAAATTGTGGGTTATCCCGAATGGTGGGATTTCACCAAGAAGCCTCGGAAGAACATTAAAGGCAAAGCTGCAGTTGCAACTACGGAAACATCTAAAAAAACAGATACTTGCTCGCTGCCTCAAGCAAATGTGACTCAAACAGGACATCCTAACCCGGAAGATTCTTGGCTTTGGTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotran_gag_2

Protein Analysis

371

Amino Acids

41.77

Weight (kDa)

7.64

Isoelectric Point (pI)

43.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_3 PF14244 38 - 75 8e-08 gag-polypeptide of LTR copia-type
Retrotran_gag_2 PF14223 60 - 165 1.5e-06 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000146)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19561 FvH4_1g25371 FvH4_1g25961 FvH4_2g00352 FvH4_2g00861 FvH4_2g04952 FvH4_2g05413 FvH4_2g07531 FvH4_2g08961 FvH4_2g25141 FvH4_2g27292 FvH4_3g18164 FvH4_3g19921 FvH4_3g43870 FvH4_4g14441 FvH4_4g15581 FvH4_4g15582 FvH4_4g16890 FvH4_4g19782 FvH4_4g33444 FvH4_4g33921 FvH4_5g22281 FvH4_5g22282 FvH4_5g32571 FvH4_5g37451 FvH4_5g39631 FvH4_6g04721 FvH4_6g11661 FvH4_6g20571 FvH4_6g32791 FvH4_7g23184
prunus_persica Prupe.1G090900_v2.0.a1 Prupe.1G241200_v2.0.a1 Prupe.1G534100_v2.0.a1 Prupe.3G076700_v2.0.a1 Prupe.4G150800_v2.0.a1 Prupe.4G181800_v2.0.a1 Prupe.4G240900_v2.0.a1 Prupe.4G247600_v2.0.a1 Prupe.6G115900_v2.0.a1 Prupe.6G327500_v2.0.a1 Prupe.8G071700_v2.0.a1
pyrus_communis pycom06g11480 pycom10g08330 pycom15g04320 pycom15g04350 pycom15g12620 pycom2874g00060
rosa_chinensis RchiOBHm_Chr1g0317241 RchiOBHm_Chr1g0341801 RchiOBHm_Chr1g0341931 RchiOBHm_Chr1g0359621 RchiOBHm_Chr2g0113741 RchiOBHm_Chr2g0117261 RchiOBHm_Chr2g0138831 RchiOBHm_Chr2g0141421 RchiOBHm_Chr2g0145281 RchiOBHm_Chr2g0152991 RchiOBHm_Chr3g0448001 RchiOBHm_Chr3g0450981 RchiOBHm_Chr3g0455161 RchiOBHm_Chr3g0457401 RchiOBHm_Chr3g0460001 RchiOBHm_Chr4g0387431 RchiOBHm_Chr4g0388741 RchiOBHm_Chr4g0444201 RchiOBHm_Chr4g0444261 RchiOBHm_Chr5g0010221 RchiOBHm_Chr6g0271721 RchiOBHm_Chr6g0274641 RchiOBHm_Chr6g0294691 RchiOBHm_Chr7g0237031 RchiOBHm_Chr7g0238461 RchiOBHm_Chr7g0239981
rosa_laevigata RLG00000009017
rosa_multiflora Rmu_co7986768.1_g000001 Rmu_co8302239.1_g000001 Rmu_co8485799.1_g000001 Rmu_sc0000061.1_g000013 Rmu_sc0000303.1_g000034 Rmu_sc0000303.1_g000035 Rmu_sc0000315.1_g000017 Rmu_sc0000349.1_g000003 Rmu_sc0000498.1_g000068 Rmu_sc0000508.1_g000014 Rmu_sc0000602.1_g000001 Rmu_sc0000633.1_g000002 Rmu_sc0000638.1_g000030 Rmu_sc0000756.1_g000016 Rmu_sc0000756.1_g000017 Rmu_sc0000785.1_g000037 Rmu_sc0000795.1_g000017 Rmu_sc0000796.1_g000030 Rmu_sc0000863.1_g000023 Rmu_sc0000920.1_g000021 Rmu_sc0000960.1_g000015 Rmu_sc0000982.1_g000102 Rmu_sc0001036.1_g000008 Rmu_sc0001036.1_g000009 Rmu_sc0001643.1_g000029 Rmu_sc0001687.1_g000026 Rmu_sc0001708.1_g000037 Rmu_sc0001768.1_g000015 Rmu_sc0001790.1_g000022 Rmu_sc0002180.1_g000007 Rmu_sc0002211.1_g000006 Rmu_sc0002270.1_g000010 Rmu_sc0002404.1_g000031 Rmu_sc0002858.1_g000016 Rmu_sc0003063.1_g000028 Rmu_sc0003730.1_g000017 Rmu_sc0004087.1_g000020 Rmu_sc0004618.1_g000048 Rmu_sc0004724.1_g000005 Rmu_sc0005167.1_g000036 Rmu_sc0005781.1_g000003 Rmu_sc0005878.1_g000012 Rmu_sc0006011.1_g000003 Rmu_sc0006343.1_g000011 Rmu_sc0006573.1_g000007 Rmu_sc0006599.1_g000007 Rmu_sc0006803.1_g000014 Rmu_sc0006836.1_g000002 Rmu_sc0006849.1_g000002 Rmu_sc0007109.1_g000009 Rmu_sc0009268.1_g000016 Rmu_sc0009618.1_g000017 Rmu_sc0009674.1_g000009 Rmu_sc0010244.1_g000009 Rmu_sc0011151.1_g000004 Rmu_sc0011356.1_g000001 Rmu_sc0011674.1_g000002 Rmu_sc0011778.1_g000016 Rmu_sc0012342.1_g000001 Rmu_sc0012467.1_g000002 Rmu_sc0012574.1_g000003 Rmu_sc0012913.1_g000005 Rmu_sc0013612.1_g000020 Rmu_sc0014824.1_g000001 Rmu_sc0017869.1_g000002 Rmu_sc0018085.1_g000003 Rmu_sc0024789.1_g000001 Rmu_sc0025106.1_g000013 Rmu_sc0034502.1_g000001 Rmu_sc0034547.1_g000001 Rmu_sc0035094.1_g000001 Rmu_sc0035095.1_g000001 Rmu_ssc0000100.1_g000027 Rmu_ssc0000244.1_g000005 Rmu_ssc0000371.1_g000029 Rmu_ssc0000381.1_g000004
rosa_roxburghii Rroxscaffold_1G00015480 Rroxscaffold_1G00023580 Rroxscaffold_1G00039340 Rroxscaffold_1G00047080 Rroxscaffold_2G00095820 Rroxscaffold_2G00125200 Rroxscaffold_2G00128330 Rroxscaffold_3G00270860
rosa_rugosa Rorug06G0120700
rosa_samantha Rh3BG173100 Rh6AG089600 Rh7AG488100 Rh7DG389600
rosa_wichuraiana Rw0G001150 Rw0G001990 Rw0G002010 Rw0G019540 Rw1G013730 Rw1G024110 Rw1G029190 Rw2G018850 Rw2G021090 Rw2G022260 Rw2G023180 Rw2G027280 Rw3G010190 Rw3G020660 Rw3G029380 Rw4G002390 Rw4G002690 Rw4G033260 Rw5G011960 Rw5G023110 Rw5G025250 Rw5G028950 Rw5G033740 Rw5G033950 Rw5G037900 Rw6G009640 Rw6G011620 Rw6G027720 Rw7G010680 Rw7G042070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 462
AccI GTMKAC 1 cut(s) 442
AccII CGCG 1 cut(s) 181
AciI CCGC 4 cut(s) 394, 565, 628, 768
AclWI GGATC 1 cut(s) 654
AcsI RAATTY 2 cut(s) 621, 706
AcuI CTGAAG 1 cut(s) 696
AfaI GTAC 2 cut(s) 612, 730
AfiI CCNNNNNNNGG 5 cut(s) 227, 794, 806, 904, 960
AgsI TTSAA 5 cut(s) 294, 409, 485, 552, 653
AjnI CCWGG 4 cut(s) 123, 606, 756, 805
AleI CACNNNNGTG 1 cut(s) 900
Alw21I GWGCWC 1 cut(s) 506
Alw26I GTCTC 2 cut(s) 156, 383
AlwI GGATC 1 cut(s) 654
AoxI GGCC 1 cut(s) 796
ApeKI GCWGC 3 cut(s) 770, 1004, 1051
ApoI RAATTY 2 cut(s) 621, 706
Asp700I GAANNNNTTC 2 cut(s) 419, 709
AspLEI GCGC 2 cut(s) 181, 183
AspS9I GGNCC 1 cut(s) 797
AsuC2I CCSGG 4 cut(s) 228, 828, 879, 1091
AsuHPI GGTGA 4 cut(s) 93, 415, 887, 961
BaeI ACNNNNGTAYC 2 cut(s) 237, 270
BanII GRGCYC 1 cut(s) 767
BbsI GAAGAC 2 cut(s) 522, 701
Bbv12I GWGCWC 1 cut(s) 506
BbvI GCAGC 3 cut(s) 757, 991, 1038
BccI CCATC 4 cut(s) 49, 221, 310, 371
BciT130I CCWGG 4 cut(s) 125, 608, 758, 807
BclI TGATCA 1 cut(s) 493
BcnI CCSGG 4 cut(s) 228, 828, 879, 1091
BcoDI GTCTC 2 cut(s) 156, 383
BfaI CTAG 1 cut(s) 789
BfmI CTRYAG 2 cut(s) 431, 1005
BisI GCNGC 3 cut(s) 771, 1005, 1052
BlpI GCTNAGC 1 cut(s) 542
BlsI GCNGC 3 cut(s) 772, 1006, 1053
Bme1390I CCNGG 8 cut(s) 125, 228, 608, 758, 807, 828, 879, 1091
BmgT120I GGNCC 1 cut(s) 797
BmiI GGNNCC 2 cut(s) 636, 766
BmrFI CCNGG 8 cut(s) 125, 228, 608, 758, 807, 828, 879, 1091
BmsI GCATC 3 cut(s) 62, 156, 300
BpiI GAAGAC 2 cut(s) 522, 701
BplI GAGNNNNNCTC 2 cut(s) 493, 525
BpmI CTGGAG 2 cut(s) 779, 789
Bpu1102I GCTNAGC 1 cut(s) 542
BpuEI CTTGAG 5 cut(s) 138, 324, 495, 601, 1041
BpuMI CCSGG 4 cut(s) 228, 828, 879, 1091
BsaAI YACGTR 2 cut(s) 249, 614
BsaI GGTCTC 2 cut(s) 156, 383
BsaJI CCNNGG 2 cut(s) 854, 980
BsaWI WCCGGW 1 cut(s) 411
Bsc4I CCNNNNNNNGG 5 cut(s) 227, 794, 806, 904, 960
Bse118I RCCGGY 2 cut(s) 113, 203
BseBI CCWGG 4 cut(s) 125, 608, 758, 807
BseDI CCNNGG 2 cut(s) 854, 980
BseGI GGATG 2 cut(s) 133, 1081
BseLI CCNNNNNNNGG 5 cut(s) 227, 794, 806, 904, 960
BseMII CTCAG 1 cut(s) 556
BsePI GCGCGC 1 cut(s) 179
BseXI GCAGC 3 cut(s) 757, 991, 1038
Bsh1236I CGCG 1 cut(s) 181
BshFI GGCC 1 cut(s) 798
BsiHKAI GWGCWC 1 cut(s) 506
BsiSI CCGG 7 cut(s) 114, 204, 228, 412, 828, 879, 1091
BslI CCNNNNNNNGG 5 cut(s) 227, 794, 806, 904, 960
BsmAI GTCTC 2 cut(s) 156, 383
BsnI GGCC 1 cut(s) 798
Bso31I GGTCTC 2 cut(s) 156, 383
Bsp1286I GDGCHC 2 cut(s) 506, 767
Bsp143I GATC 2 cut(s) 493, 646
Bsp1720I GCTNAGC 1 cut(s) 542
BspACI CCGC 4 cut(s) 394, 565, 628, 768
BspANI GGCC 1 cut(s) 798
BspCNI CTCAG 1 cut(s) 555
BspFNI CGCG 1 cut(s) 181
BspLI GGNNCC 2 cut(s) 636, 766
BspMAI CTGCAG 1 cut(s) 1009
BspPI GGATC 1 cut(s) 654
BspTNI GGTCTC 2 cut(s) 156, 383
BsrFI RCCGGY 2 cut(s) 113, 203
BssAI RCCGGY 2 cut(s) 113, 203
BssECI CCNNGG 2 cut(s) 854, 980
BssHII GCGCGC 1 cut(s) 179
BssMI GATC 2 cut(s) 493, 646
Bst2UI CCWGG 4 cut(s) 125, 608, 758, 807
Bst4CI ACNGT 3 cut(s) 92, 523, 733
BstAPI GCANNNNNTGC 1 cut(s) 562
BstBAI YACGTR 2 cut(s) 249, 614
BstC8I GCNNGC 4 cut(s) 181, 193, 281, 1049
BstDEI CTNAG 2 cut(s) 542, 921
BstENI CCTNNNNNAGG 1 cut(s) 792
BstF5I GGATG 2 cut(s) 133, 1081
BstFNI CGCG 1 cut(s) 181
BstHHI GCGC 2 cut(s) 181, 183
BstKTI GATC 2 cut(s) 496, 649
BstMAI GTCTC 2 cut(s) 156, 383
BstMBI GATC 2 cut(s) 493, 646
BstMWI GCNNNNNNNGC 2 cut(s) 562, 1010
BstNI CCWGG 4 cut(s) 125, 608, 758, 807
BstSCI CCNGG 8 cut(s) 123, 226, 606, 756, 805, 826, 877, 1089
BstSFI CTRYAG 2 cut(s) 431, 1005
BstUI CGCG 1 cut(s) 181
BstV1I GCAGC 3 cut(s) 757, 991, 1038
BstV2I GAAGAC 2 cut(s) 522, 701
BstX2I RGATCY 1 cut(s) 646
BstXI CCANNNNNNTGG 1 cut(s) 614
BstYI RGATCY 1 cut(s) 646
BsuRI GGCC 1 cut(s) 798
BtsCI GGATG 2 cut(s) 133, 1081
BtsIMutI CAGTG 3 cut(s) 97, 305, 720
Cac8I GCNNGC 4 cut(s) 181, 193, 281, 1049
CfoI GCGC 2 cut(s) 181, 183
Cfr10I RCCGGY 2 cut(s) 113, 203
Cfr13I GGNCC 1 cut(s) 797
CsiI ACCWGGT 1 cut(s) 606
Csp6I GTAC 2 cut(s) 611, 729
CviAII CATG 2 cut(s) 77, 160
CviQI GTAC 2 cut(s) 611, 729
DdeI CTNAG 2 cut(s) 542, 921
DpnI GATC 2 cut(s) 495, 648
DpnII GATC 2 cut(s) 493, 646
Eco24I GRGCYC 1 cut(s) 767
Eco31I GGTCTC 2 cut(s) 156, 383
Eco57I CTGAAG 1 cut(s) 696
EcoNI CCTNNNNNAGG 1 cut(s) 792
EcoRII CCWGG 4 cut(s) 123, 606, 756, 805
EcoT38I GRGCYC 1 cut(s) 767
FaeI CATG 2 cut(s) 80, 163
FatI CATG 2 cut(s) 76, 159
FauI CCCGC 2 cut(s) 401, 558
FbaI TGATCA 1 cut(s) 493
FblI GTMKAC 1 cut(s) 442
Fnu4HI GCNGC 3 cut(s) 771, 1005, 1052
FokI GGATG 2 cut(s) 140, 1068
FriOI GRGCYC 1 cut(s) 767
Fsp4HI GCNGC 3 cut(s) 771, 1005, 1052
FspBI CTAG 1 cut(s) 789
GlaI GCGC 2 cut(s) 180, 182
GluI GCNGC 3 cut(s) 771, 1005, 1052
GsuI CTGGAG 2 cut(s) 779, 789
HaeIII GGCC 1 cut(s) 798
HapII CCGG 7 cut(s) 114, 204, 228, 412, 828, 879, 1091
HhaI GCGC 2 cut(s) 181, 183
Hin1II CATG 2 cut(s) 80, 163
Hin6I GCGC 2 cut(s) 179, 181
HinP1I GCGC 2 cut(s) 179, 181
HincII GTYRAC 2 cut(s) 7, 60
HindII GTYRAC 2 cut(s) 7, 60
HinfI GANTC 8 cut(s) 233, 290, 298, 318, 593, 810, 1069, 1097
HpaII CCGG 7 cut(s) 114, 204, 228, 412, 828, 879, 1091
HphI GGTGA 4 cut(s) 93, 415, 887, 961
Hpy166II GTNNAC 3 cut(s) 7, 60, 443
Hpy188I TCNGA 4 cut(s) 385, 598, 858, 984
Hpy188III TCNNGA 8 cut(s) 341, 349, 485, 512, 580, 590, 650, 953
Hpy8I GTNNAC 3 cut(s) 7, 60, 443
Hpy99I CGWCG 1 cut(s) 14
HpyAV CCTTC 2 cut(s) 521, 625
HpyCH4III ACNGT 3 cut(s) 92, 523, 733
HpyCH4IV ACGT 2 cut(s) 248, 613
HpyCH4V TGCA 6 cut(s) 53, 313, 556, 773, 1007, 1013
HpyF10VI GCNNNNNNNGC 2 cut(s) 562, 1010
HpyF3I CTNAG 2 cut(s) 542, 921
HpySE526I ACGT 2 cut(s) 248, 613
Hsp92II CATG 2 cut(s) 80, 163
HspAI GCGC 2 cut(s) 179, 181
Ksp22I TGATCA 1 cut(s) 493
Kzo9I GATC 2 cut(s) 493, 646
LmnI GCTCC 4 cut(s) 501, 682, 770, 830
Lsp1109I GCAGC 3 cut(s) 757, 991, 1038
LweI GCATC 3 cut(s) 62, 156, 300
MabI ACCWGGT 1 cut(s) 606
MaeI CTAG 1 cut(s) 789
MaeII ACGT 2 cut(s) 248, 613
MaeIII GTNAC 5 cut(s) 92, 253, 893, 914, 1066
MalI GATC 2 cut(s) 495, 648
MboI GATC 2 cut(s) 493, 646
MboII GAAGA 6 cut(s) 527, 568, 702, 706, 997, 1106
MfeI CAATTG 1 cut(s) 69
MflI RGATCY 1 cut(s) 646
MhlI GDGCHC 2 cut(s) 506, 767
MlyI GAGTC 1 cut(s) 1063
MmeI TCCRAC 1 cut(s) 261
MnlI CCTC 7 cut(s) 48, 456, 754, 813, 864, 990, 1065
MroXI GAANNNNTTC 2 cut(s) 419, 709
MseI TTAA 2 cut(s) 753, 993
MslI CAYNNNNRTG 3 cut(s) 164, 551, 900
MspA1I CMGCKG 1 cut(s) 770
MspI CCGG 7 cut(s) 114, 204, 228, 412, 828, 879, 1091
MspR9I CCNGG 8 cut(s) 125, 228, 608, 758, 807, 828, 879, 1091
MunI CAATTG 1 cut(s) 69
MvaI CCWGG 4 cut(s) 125, 608, 758, 807
MvnI CGCG 1 cut(s) 181
MwoI GCNNNNNNNGC 2 cut(s) 562, 1010
NciI CCSGG 4 cut(s) 228, 828, 879, 1091
NdeII GATC 2 cut(s) 493, 646
NlaIII CATG 2 cut(s) 80, 163
NlaIV GGNNCC 2 cut(s) 636, 766
NmuCI GTSAC 4 cut(s) 92, 893, 914, 1066
OliI CACNNNNGTG 1 cut(s) 900
PauI GCGCGC 1 cut(s) 179
PdmI GAANNNNTTC 2 cut(s) 419, 709
PfeI GAWTC 7 cut(s) 233, 290, 298, 318, 593, 810, 1097
PfoI TCCNGGA 2 cut(s) 123, 805
PkrI GCNGC 3 cut(s) 772, 1006, 1053
PleI GAGTC 1 cut(s) 1063
PpsI GAGTC 1 cut(s) 1063
Ppu21I YACGTR 2 cut(s) 249, 614
PsiI TTATAA 1 cut(s) 462
Psp6I CCWGG 4 cut(s) 123, 606, 756, 805
PspGI CCWGG 4 cut(s) 123, 606, 756, 805
PspN4I GGNNCC 2 cut(s) 636, 766
PspPI GGNCC 1 cut(s) 797
PstI CTGCAG 1 cut(s) 1009
PsuI RGATCY 1 cut(s) 646
PteI GCGCGC 1 cut(s) 179
RsaI GTAC 2 cut(s) 612, 730
RsaNI GTAC 2 cut(s) 611, 729
RseI CAYNNNNRTG 3 cut(s) 164, 551, 900
SaqAI TTAA 2 cut(s) 753, 993
SatI GCNGC 3 cut(s) 771, 1005, 1052
Sau3AI GATC 2 cut(s) 493, 646
Sau96I GGNCC 1 cut(s) 797
SchI GAGTC 1 cut(s) 1063
ScrFI CCNGG 8 cut(s) 125, 228, 608, 758, 807, 828, 879, 1091
SduI GDGCHC 2 cut(s) 506, 767
SexAI ACCWGGT 1 cut(s) 606
SfaNI GCATC 3 cut(s) 62, 156, 300
SfcI CTRYAG 2 cut(s) 431, 1005
SmiMI CAYNNNNRTG 3 cut(s) 164, 551, 900
SmlI CTYRAG 5 cut(s) 153, 339, 510, 580, 1056
SmoI CTYRAG 5 cut(s) 153, 339, 510, 580, 1056
SsiI CCGC 4 cut(s) 394, 565, 628, 768
SspMI CTAG 1 cut(s) 789
StyD4I CCNGG 8 cut(s) 123, 226, 606, 756, 805, 826, 877, 1089
TaaI ACNGT 3 cut(s) 92, 523, 733
TaiI ACGT 2 cut(s) 251, 616
TatI WGTACW 1 cut(s) 728
TfiI GAWTC 7 cut(s) 233, 290, 298, 318, 593, 810, 1097
Tru1I TTAA 2 cut(s) 753, 993
Tru9I TTAA 2 cut(s) 753, 993
TscAI CASTG 3 cut(s) 97, 312, 720
TseFI GTSAC 4 cut(s) 92, 893, 914, 1066
TseI GCWGC 3 cut(s) 770, 1004, 1051
Tsp45I GTSAC 4 cut(s) 92, 893, 914, 1066
TspDTI ATGAA 7 cut(s) 65, 144, 310, 480, 560, 859, 951
TspGWI ACGGA 2 cut(s) 27, 1034
TspRI CASTG 3 cut(s) 97, 312, 720
XagI CCTNNNNNAGG 1 cut(s) 792
XapI RAATTY 2 cut(s) 621, 706
XmiI GTMKAC 1 cut(s) 442
XmnI GAANNNNTTC 2 cut(s) 419, 709
XspI CTAG 1 cut(s) 789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.