Rmu_sc0034547.1_g000001
RLK Family

Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0034547.1
Physical Location & Seq
Forward (+)
1 .. 516
516 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0034547.1_g000001.1.cds

Sequence Viewer

Length: 336 bp
gaggaatgtgaaactgctgaggcaatatggaagacgttgggagatctctataccaatgagtctgattttatacaggttcataaactgatgtgcaaagctgcaggaatgcaacagaatgggcaaccagtgtcagtgttttttaccaagctgaagaaggtatgggctgagattgaccagaagcgtccttgcaagatcaagaatcaggaggatattacatgccattcaagcaccagcacctttactccagcagcagcagcagcattcgattccactccatcaacaaggacctccaccaggttttgcccaccgccctcgtcctcagtgttcttattgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

111

Amino Acids

12.32

Weight (kDa)

6.97

Isoelectric Point (pI)

45.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000146)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19561 FvH4_1g25371 FvH4_1g25961 FvH4_2g00352 FvH4_2g00861 FvH4_2g04952 FvH4_2g05413 FvH4_2g07531 FvH4_2g08961 FvH4_2g25141 FvH4_2g27292 FvH4_3g18164 FvH4_3g19921 FvH4_3g43870 FvH4_4g14441 FvH4_4g15581 FvH4_4g15582 FvH4_4g16890 FvH4_4g19782 FvH4_4g33444 FvH4_4g33921 FvH4_5g22281 FvH4_5g22282 FvH4_5g32571 FvH4_5g37451 FvH4_5g39631 FvH4_6g04721 FvH4_6g11661 FvH4_6g20571 FvH4_6g32791 FvH4_7g23184
prunus_persica Prupe.1G090900_v2.0.a1 Prupe.1G241200_v2.0.a1 Prupe.1G534100_v2.0.a1 Prupe.3G076700_v2.0.a1 Prupe.4G150800_v2.0.a1 Prupe.4G181800_v2.0.a1 Prupe.4G240900_v2.0.a1 Prupe.4G247600_v2.0.a1 Prupe.6G115900_v2.0.a1 Prupe.6G327500_v2.0.a1 Prupe.8G071700_v2.0.a1
pyrus_communis pycom06g11480 pycom10g08330 pycom15g04320 pycom15g04350 pycom15g12620 pycom2874g00060
rosa_chinensis RchiOBHm_Chr1g0317241 RchiOBHm_Chr1g0341801 RchiOBHm_Chr1g0341931 RchiOBHm_Chr1g0359621 RchiOBHm_Chr2g0113741 RchiOBHm_Chr2g0117261 RchiOBHm_Chr2g0138831 RchiOBHm_Chr2g0141421 RchiOBHm_Chr2g0145281 RchiOBHm_Chr2g0152991 RchiOBHm_Chr3g0448001 RchiOBHm_Chr3g0450981 RchiOBHm_Chr3g0455161 RchiOBHm_Chr3g0457401 RchiOBHm_Chr3g0460001 RchiOBHm_Chr4g0387431 RchiOBHm_Chr4g0388741 RchiOBHm_Chr4g0444201 RchiOBHm_Chr4g0444261 RchiOBHm_Chr5g0010221 RchiOBHm_Chr6g0271721 RchiOBHm_Chr6g0274641 RchiOBHm_Chr6g0294691 RchiOBHm_Chr7g0237031 RchiOBHm_Chr7g0238461 RchiOBHm_Chr7g0239981
rosa_laevigata RLG00000009017
rosa_multiflora Rmu_co7986768.1_g000001 Rmu_co8302239.1_g000001 Rmu_co8485799.1_g000001 Rmu_sc0000061.1_g000013 Rmu_sc0000303.1_g000034 Rmu_sc0000303.1_g000035 Rmu_sc0000315.1_g000017 Rmu_sc0000349.1_g000003 Rmu_sc0000498.1_g000068 Rmu_sc0000508.1_g000014 Rmu_sc0000602.1_g000001 Rmu_sc0000633.1_g000002 Rmu_sc0000638.1_g000030 Rmu_sc0000756.1_g000016 Rmu_sc0000756.1_g000017 Rmu_sc0000785.1_g000037 Rmu_sc0000795.1_g000017 Rmu_sc0000796.1_g000030 Rmu_sc0000863.1_g000023 Rmu_sc0000920.1_g000021 Rmu_sc0000960.1_g000015 Rmu_sc0000982.1_g000102 Rmu_sc0001036.1_g000008 Rmu_sc0001036.1_g000009 Rmu_sc0001643.1_g000029 Rmu_sc0001687.1_g000026 Rmu_sc0001708.1_g000037 Rmu_sc0001768.1_g000015 Rmu_sc0001790.1_g000022 Rmu_sc0002180.1_g000007 Rmu_sc0002211.1_g000006 Rmu_sc0002270.1_g000010 Rmu_sc0002404.1_g000031 Rmu_sc0002858.1_g000016 Rmu_sc0003063.1_g000028 Rmu_sc0003730.1_g000017 Rmu_sc0004087.1_g000020 Rmu_sc0004618.1_g000048 Rmu_sc0004724.1_g000005 Rmu_sc0005167.1_g000036 Rmu_sc0005781.1_g000003 Rmu_sc0005878.1_g000012 Rmu_sc0006011.1_g000003 Rmu_sc0006343.1_g000011 Rmu_sc0006573.1_g000007 Rmu_sc0006599.1_g000007 Rmu_sc0006803.1_g000014 Rmu_sc0006836.1_g000002 Rmu_sc0006849.1_g000002 Rmu_sc0007109.1_g000009 Rmu_sc0009268.1_g000016 Rmu_sc0009618.1_g000017 Rmu_sc0009674.1_g000009 Rmu_sc0010244.1_g000009 Rmu_sc0011151.1_g000004 Rmu_sc0011356.1_g000001 Rmu_sc0011674.1_g000002 Rmu_sc0011778.1_g000016 Rmu_sc0012342.1_g000001 Rmu_sc0012467.1_g000002 Rmu_sc0012574.1_g000003 Rmu_sc0012913.1_g000005 Rmu_sc0013612.1_g000020 Rmu_sc0014824.1_g000001 Rmu_sc0017869.1_g000002 Rmu_sc0018085.1_g000003 Rmu_sc0024789.1_g000001 Rmu_sc0025106.1_g000013 Rmu_sc0034502.1_g000001 Rmu_sc0034547.1_g000001 Rmu_sc0035094.1_g000001 Rmu_sc0035095.1_g000001 Rmu_ssc0000100.1_g000027 Rmu_ssc0000244.1_g000005 Rmu_ssc0000371.1_g000029 Rmu_ssc0000381.1_g000004
rosa_roxburghii Rroxscaffold_1G00015480 Rroxscaffold_1G00023580 Rroxscaffold_1G00039340 Rroxscaffold_1G00047080 Rroxscaffold_2G00095820 Rroxscaffold_2G00125200 Rroxscaffold_2G00128330 Rroxscaffold_3G00270860
rosa_rugosa Rorug06G0120700
rosa_samantha Rh3BG173100 Rh6AG089600 Rh7AG488100 Rh7DG389600
rosa_wichuraiana Rw0G001150 Rw0G001990 Rw0G002010 Rw0G019540 Rw1G013730 Rw1G024110 Rw1G029190 Rw2G018850 Rw2G021090 Rw2G022260 Rw2G023180 Rw2G027280 Rw3G010190 Rw3G020660 Rw3G029380 Rw4G002390 Rw4G002690 Rw4G033260 Rw5G011960 Rw5G023110 Rw5G025250 Rw5G028950 Rw5G033740 Rw5G033950 Rw5G037900 Rw6G009640 Rw6G011620 Rw6G027720 Rw7G010680 Rw7G042070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 308
AcuI CTGAAG 1 cut(s) 170
AfiI CCNNNNNNNGG 1 cut(s) 294
AgsI TTSAA 1 cut(s) 225
AjnI CCWGG 1 cut(s) 293
AluBI AGCT 2 cut(s) 98, 148
AluI AGCT 2 cut(s) 98, 148
ApeKI GCWGC 5 cut(s) 98, 248, 251, 254, 257
AspS9I GGNCC 1 cut(s) 285
AvaII GGWCC 1 cut(s) 285
BbsI GAAGAC 1 cut(s) 38
BbvCI CCTCAGC 1 cut(s) 18
BbvI GCAGC 5 cut(s) 85, 260, 263, 266, 269
BccI CCATC 1 cut(s) 283
BciT130I CCWGG 1 cut(s) 295
BfmI CTRYAG 1 cut(s) 99
BglII AGATCT 1 cut(s) 43
BisI GCNGC 5 cut(s) 99, 249, 252, 255, 258
BlsI GCNGC 5 cut(s) 100, 250, 253, 256, 259
Bme1390I CCNGG 1 cut(s) 295
Bme18I GGWCC 1 cut(s) 285
BmgT120I GGNCC 1 cut(s) 285
BmrFI CCNGG 1 cut(s) 295
BpiI GAAGAC 1 cut(s) 38
BpmI CTGGAG 1 cut(s) 228
Bpu10I CCTNAGC 1 cut(s) 18
BsaXI ACNNNNNCTCC 2 cut(s) 226, 256
Bsc4I CCNNNNNNNGG 1 cut(s) 294
Bse1I ACTGG 1 cut(s) 125
BseBI CCWGG 1 cut(s) 295
BseLI CCNNNNNNNGG 1 cut(s) 294
BseMII CTCAG 3 cut(s) 9, 156, 333
BseNI ACTGG 1 cut(s) 125
BseXI GCAGC 5 cut(s) 85, 260, 263, 266, 269
BslI CCNNNNNNNGG 1 cut(s) 294
BsmI GAATGC 2 cut(s) 111, 260
Bsp143I GATC 2 cut(s) 43, 192
BspACI CCGC 1 cut(s) 308
BspCNI CTCAG 3 cut(s) 10, 157, 332
BspMAI CTGCAG 1 cut(s) 103
BsrI ACTGG 1 cut(s) 125
BssMI GATC 2 cut(s) 43, 192
Bst2UI CCWGG 1 cut(s) 295
BstDEI CTNAG 3 cut(s) 18, 165, 319
BstENI CCTNNNNNAGG 1 cut(s) 292
BstKTI GATC 2 cut(s) 46, 195
BstMBI GATC 2 cut(s) 43, 192
BstMWI GCNNNNNNNGC 3 cut(s) 225, 254, 257
BstNI CCWGG 1 cut(s) 295
BstNSI RCATGY 1 cut(s) 219
BstSCI CCNGG 1 cut(s) 293
BstSFI CTRYAG 1 cut(s) 99
BstV1I GCAGC 5 cut(s) 85, 260, 263, 266, 269
BstV2I GAAGAC 1 cut(s) 38
BstX2I RGATCY 1 cut(s) 43
BstYI RGATCY 1 cut(s) 43
BtsIMutI CAGTG 3 cut(s) 132, 138, 327
Cfr13I GGNCC 1 cut(s) 285
CseI GACGC 1 cut(s) 170
CsiI ACCWGGT 1 cut(s) 293
CviAII CATG 1 cut(s) 216
CviJI RGCY 3 cut(s) 98, 148, 164
CviKI_1 RGCY 3 cut(s) 98, 148, 164
DdeI CTNAG 3 cut(s) 18, 165, 319
DpnI GATC 2 cut(s) 45, 194
DpnII GATC 2 cut(s) 43, 192
Eco47I GGWCC 1 cut(s) 285
Eco57I CTGAAG 1 cut(s) 170
EcoNI CCTNNNNNAGG 1 cut(s) 292
EcoO109I RGGNCCY 1 cut(s) 285
EcoRII CCWGG 1 cut(s) 293
FaeI CATG 1 cut(s) 219
FaiI YATR 6 cut(s) 28, 51, 71, 81, 160, 217
FatI CATG 1 cut(s) 215
Fnu4HI GCNGC 5 cut(s) 99, 249, 252, 255, 258
Fsp4HI GCNGC 5 cut(s) 99, 249, 252, 255, 258
GluI GCNGC 5 cut(s) 99, 249, 252, 255, 258
GsuI CTGGAG 1 cut(s) 228
HgaI GACGC 1 cut(s) 170
Hin1II CATG 1 cut(s) 219
HinfI GANTC 3 cut(s) 59, 199, 266
Hpy188I TCNGA 1 cut(s) 64
Hpy188III TCNNGA 2 cut(s) 196, 203
HpyAV CCTTC 1 cut(s) 148
HpyCH4IV ACGT 1 cut(s) 35
HpyCH4V TGCA 4 cut(s) 93, 101, 109, 189
HpyF10VI GCNNNNNNNGC 3 cut(s) 225, 254, 257
HpyF3I CTNAG 3 cut(s) 18, 165, 319
HpySE526I ACGT 1 cut(s) 35
Hsp92II CATG 1 cut(s) 219
Kzo9I GATC 2 cut(s) 43, 192
LpnPI CCDG 9 cut(s) 59, 87, 138, 188, 188, 244, 258, 280, 307
Lsp1109I GCAGC 5 cut(s) 85, 260, 263, 266, 269
MabI ACCWGGT 1 cut(s) 293
MaeII ACGT 1 cut(s) 35
MalI GATC 2 cut(s) 45, 194
MboI GATC 2 cut(s) 43, 192
MboII GAAGA 2 cut(s) 43, 163
MflI RGATCY 1 cut(s) 43
MlyI GAGTC 1 cut(s) 68
MnlI CCTC 5 cut(s) 13, 199, 298, 322, 328
MspR9I CCNGG 1 cut(s) 295
Mva1269I GAATGC 2 cut(s) 111, 260
MvaI CCWGG 1 cut(s) 295
MwoI GCNNNNNNNGC 3 cut(s) 225, 254, 257
NdeII GATC 2 cut(s) 43, 192
NlaIII CATG 1 cut(s) 219
NspI RCATGY 1 cut(s) 219
PctI GAATGC 2 cut(s) 111, 260
PfeI GAWTC 2 cut(s) 199, 266
PkrI GCNGC 5 cut(s) 100, 250, 253, 256, 259
PleI GAGTC 1 cut(s) 67
PpsI GAGTC 1 cut(s) 67
PpuMI RGGWCCY 1 cut(s) 285
Psp5II RGGWCCY 1 cut(s) 285
Psp6I CCWGG 1 cut(s) 293
PspGI CCWGG 1 cut(s) 293
PspPI GGNCC 1 cut(s) 285
PspPPI RGGWCCY 1 cut(s) 285
PstI CTGCAG 1 cut(s) 103
PsuI RGATCY 1 cut(s) 43
SatI GCNGC 5 cut(s) 99, 249, 252, 255, 258
Sau3AI GATC 2 cut(s) 43, 192
Sau96I GGNCC 1 cut(s) 285
SchI GAGTC 1 cut(s) 68
ScrFI CCNGG 1 cut(s) 295
SetI ASST 8 cut(s) 38, 78, 100, 150, 159, 239, 290, 299
SexAI ACCWGGT 1 cut(s) 293
SfcI CTRYAG 1 cut(s) 99
SinI GGWCC 1 cut(s) 285
SsiI CCGC 1 cut(s) 308
StyD4I CCNGG 1 cut(s) 293
TaiI ACGT 1 cut(s) 38
TaqI TCGA 1 cut(s) 264
TfiI GAWTC 2 cut(s) 199, 266
TscAI CASTG 3 cut(s) 132, 138, 327
TseI GCWGC 5 cut(s) 98, 248, 251, 254, 257
TspDTI ATGAA 1 cut(s) 68
TspRI CASTG 3 cut(s) 132, 138, 327
VpaK11BI GGWCC 1 cut(s) 285
XagI CCTNNNNNAGG 1 cut(s) 292
XceI RCATGY 1 cut(s) 219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.