RchiOBHm_Chr3g0457401
RLK Family

Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000146
Physical Location & Seq
Forward (+)
6539405 .. 6540963
1559 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42415

Sequence Viewer

Length: 1191 bp
ATGGCTGGCCCTGATGCTCCACTTTTAGAAGGAAGGAATACCAGCAATTCTGGACTTCAGAAAATTGAAGTTTCCGTTCAACACCCAGATTCTTCCTTAAGTTCATTCGGAGGAGCAAAACTAAATGGACCTGGGAATTACAGGACATGGAAGAAGATGATTTCCGCTCACCTTCGTGGAATCCATAAGATGGGTCATGTCGTCGGTACCATTAAGGCACCGCTGAATGAAGAAAGTGAAGAATATGTCAAGTGGGAAGATGCTGATGGACTTGTACTATCAATTTTGTACAAAGCCATGACTGATGAGGTGATCCAATTAATCATTGGGTGTGACACTGCTGCAGAAGTTTGGAAGACACTCAATGATCTCTATCTGAATGAATCAGATTTTTCTCAAATCTATGAGTTGTTGTGCAAGGCAACAAGGATGAAGCAAGATGGGCAAGCAGTTTCAGTGTTTTACACCCAGCTGAAAAATGTTTGGGCTGAGATCGATCAGCGACGACCAAACAAATTGAAGAATGCTGAGGATATTACTTGGTACCAAAAAGAGAAGGAGTTGGAGCGTGTGCACCAATTTCTGAGTGGATTAAATGCTAGACATGACAGTGCCAAAGGAGAGTTGTTGCGTCGGCAAGAGCCTCCTTCCCTTACTGAGGCTTTTACCTACATCCGTAAGGATGAGTCTCAGCAAGACAGCACAAAGGCAGTCCATTCTGAAATCTCCAGCCTGACAATCCAAGCTAAGCCCCCACGGGCTCAAGGTCCACCTCCTGGCTTCAGTACACCACTATCAGGATTACAACCCATAACTCAGGGTCCATATCCAGGCAAGTCTGTATGTCAACATTGCAAACTACCTGGACATACCAAGGAGACTTGTTATAAGTTAGTTGGGTACCCTGCTGGATACTTCAGCAAACCCAAGCCAACTGAACATCGAGGCAGAGGAAAGGCAGTTGTCCATCTTGTTCAGAGTTCAGAGTCCTTTGGAGTCGTTGGGCAAGATCATACCACTAGCGGTGATGGCCCTCCCTCAGTCTCAATGGTTGCTAGACGTACTGGATCTTCTGACCAGGGAAGTTATTGGCAAGGGGTATATGAGGGGAAGACTGTTTCATCTGGATCAGGCTTATGCCGGGGAGAGGCCAAGGAAGAATGTCCCAGTTGCTTTGACAATGGCTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotran_gag_2

Protein Analysis

396

Amino Acids

43.59

Weight (kDa)

7.18

Isoelectric Point (pI)

40.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 67 - 164 5.1e-09 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000146)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19561 FvH4_1g25371 FvH4_1g25961 FvH4_2g00352 FvH4_2g00861 FvH4_2g04952 FvH4_2g05413 FvH4_2g07531 FvH4_2g08961 FvH4_2g25141 FvH4_2g27292 FvH4_3g18164 FvH4_3g19921 FvH4_3g43870 FvH4_4g14441 FvH4_4g15581 FvH4_4g15582 FvH4_4g16890 FvH4_4g19782 FvH4_4g33444 FvH4_4g33921 FvH4_5g22281 FvH4_5g22282 FvH4_5g32571 FvH4_5g37451 FvH4_5g39631 FvH4_6g04721 FvH4_6g11661 FvH4_6g20571 FvH4_6g32791 FvH4_7g23184
prunus_persica Prupe.1G090900_v2.0.a1 Prupe.1G241200_v2.0.a1 Prupe.1G534100_v2.0.a1 Prupe.3G076700_v2.0.a1 Prupe.4G150800_v2.0.a1 Prupe.4G181800_v2.0.a1 Prupe.4G240900_v2.0.a1 Prupe.4G247600_v2.0.a1 Prupe.6G115900_v2.0.a1 Prupe.6G327500_v2.0.a1 Prupe.8G071700_v2.0.a1
pyrus_communis pycom06g11480 pycom10g08330 pycom15g04320 pycom15g04350 pycom15g12620 pycom2874g00060
rosa_chinensis RchiOBHm_Chr1g0317241 RchiOBHm_Chr1g0341801 RchiOBHm_Chr1g0341931 RchiOBHm_Chr1g0359621 RchiOBHm_Chr2g0113741 RchiOBHm_Chr2g0117261 RchiOBHm_Chr2g0138831 RchiOBHm_Chr2g0141421 RchiOBHm_Chr2g0145281 RchiOBHm_Chr2g0152991 RchiOBHm_Chr3g0448001 RchiOBHm_Chr3g0450981 RchiOBHm_Chr3g0455161 RchiOBHm_Chr3g0457401 RchiOBHm_Chr3g0460001 RchiOBHm_Chr4g0387431 RchiOBHm_Chr4g0388741 RchiOBHm_Chr4g0444201 RchiOBHm_Chr4g0444261 RchiOBHm_Chr5g0010221 RchiOBHm_Chr6g0271721 RchiOBHm_Chr6g0274641 RchiOBHm_Chr6g0294691 RchiOBHm_Chr7g0237031 RchiOBHm_Chr7g0238461 RchiOBHm_Chr7g0239981
rosa_laevigata RLG00000009017
rosa_multiflora Rmu_co7986768.1_g000001 Rmu_co8302239.1_g000001 Rmu_co8485799.1_g000001 Rmu_sc0000061.1_g000013 Rmu_sc0000303.1_g000034 Rmu_sc0000303.1_g000035 Rmu_sc0000315.1_g000017 Rmu_sc0000349.1_g000003 Rmu_sc0000498.1_g000068 Rmu_sc0000508.1_g000014 Rmu_sc0000602.1_g000001 Rmu_sc0000633.1_g000002 Rmu_sc0000638.1_g000030 Rmu_sc0000756.1_g000016 Rmu_sc0000756.1_g000017 Rmu_sc0000785.1_g000037 Rmu_sc0000795.1_g000017 Rmu_sc0000796.1_g000030 Rmu_sc0000863.1_g000023 Rmu_sc0000920.1_g000021 Rmu_sc0000960.1_g000015 Rmu_sc0000982.1_g000102 Rmu_sc0001036.1_g000008 Rmu_sc0001036.1_g000009 Rmu_sc0001643.1_g000029 Rmu_sc0001687.1_g000026 Rmu_sc0001708.1_g000037 Rmu_sc0001768.1_g000015 Rmu_sc0001790.1_g000022 Rmu_sc0002180.1_g000007 Rmu_sc0002211.1_g000006 Rmu_sc0002270.1_g000010 Rmu_sc0002404.1_g000031 Rmu_sc0002858.1_g000016 Rmu_sc0003063.1_g000028 Rmu_sc0003730.1_g000017 Rmu_sc0004087.1_g000020 Rmu_sc0004618.1_g000048 Rmu_sc0004724.1_g000005 Rmu_sc0005167.1_g000036 Rmu_sc0005781.1_g000003 Rmu_sc0005878.1_g000012 Rmu_sc0006011.1_g000003 Rmu_sc0006343.1_g000011 Rmu_sc0006573.1_g000007 Rmu_sc0006599.1_g000007 Rmu_sc0006803.1_g000014 Rmu_sc0006836.1_g000002 Rmu_sc0006849.1_g000002 Rmu_sc0007109.1_g000009 Rmu_sc0009268.1_g000016 Rmu_sc0009618.1_g000017 Rmu_sc0009674.1_g000009 Rmu_sc0010244.1_g000009 Rmu_sc0011151.1_g000004 Rmu_sc0011356.1_g000001 Rmu_sc0011674.1_g000002 Rmu_sc0011778.1_g000016 Rmu_sc0012342.1_g000001 Rmu_sc0012467.1_g000002 Rmu_sc0012574.1_g000003 Rmu_sc0012913.1_g000005 Rmu_sc0013612.1_g000020 Rmu_sc0014824.1_g000001 Rmu_sc0017869.1_g000002 Rmu_sc0018085.1_g000003 Rmu_sc0024789.1_g000001 Rmu_sc0025106.1_g000013 Rmu_sc0034502.1_g000001 Rmu_sc0034547.1_g000001 Rmu_sc0035094.1_g000001 Rmu_sc0035095.1_g000001 Rmu_ssc0000100.1_g000027 Rmu_ssc0000244.1_g000005 Rmu_ssc0000371.1_g000029 Rmu_ssc0000381.1_g000004
rosa_roxburghii Rroxscaffold_1G00015480 Rroxscaffold_1G00023580 Rroxscaffold_1G00039340 Rroxscaffold_1G00047080 Rroxscaffold_2G00095820 Rroxscaffold_2G00125200 Rroxscaffold_2G00128330 Rroxscaffold_3G00270860
rosa_rugosa Rorug06G0120700
rosa_samantha Rh3BG173100 Rh6AG089600 Rh7AG488100 Rh7DG389600
rosa_wichuraiana Rw0G001150 Rw0G001990 Rw0G002010 Rw0G019540 Rw1G013730 Rw1G024110 Rw1G029190 Rw2G018850 Rw2G021090 Rw2G022260 Rw2G023180 Rw2G027280 Rw3G010190 Rw3G020660 Rw3G029380 Rw4G002390 Rw4G002690 Rw4G033260 Rw5G011960 Rw5G023110 Rw5G025250 Rw5G028950 Rw5G033740 Rw5G033950 Rw5G037900 Rw6G009640 Rw6G011620 Rw6G027720 Rw7G010680 Rw7G042070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 888
Acc65I GGTACC 3 cut(s) 206, 543, 900
AccB1I GGYRCC 4 cut(s) 206, 217, 543, 900
AccB7I CCANNNNNTGG 2 cut(s) 190, 776
AccBSI CCGCTC 1 cut(s) 167
AciI CCGC 3 cut(s) 165, 221, 1023
AclWI GGATC 3 cut(s) 307, 1075, 1135
AcuI CTGAAG 3 cut(s) 41, 766, 901
AfaI GTAC 7 cut(s) 208, 276, 290, 545, 787, 902, 1063
AfiI CCNNNNNNNGG 6 cut(s) 190, 658, 776, 797, 830, 1147
AflII CTTAAG 1 cut(s) 97
AgsI TTSAA 3 cut(s) 68, 80, 520
AjnI CCWGG 5 cut(s) 130, 775, 829, 862, 1077
AleI CACNNNNGTG 1 cut(s) 174
AluBI AGCT 2 cut(s) 472, 746
AluI AGCT 2 cut(s) 472, 746
Alw21I GWGCWC 1 cut(s) 576
Alw26I GTCTC 3 cut(s) 693, 872, 1048
Alw44I GTGCAC 1 cut(s) 572
AlwI GGATC 3 cut(s) 307, 1075, 1135
AoxI GGCC 3 cut(s) 7, 1030, 1149
ApaLI GTGCAC 1 cut(s) 572
ApeKI GCWGC 1 cut(s) 341
AseI ATTAAT 1 cut(s) 320
Asp718I GGTACC 3 cut(s) 206, 543, 900
AspS9I GGNCC 5 cut(s) 8, 128, 767, 821, 1031
AsuC2I CCSGG 1 cut(s) 1142
AsuHPI GGTGA 3 cut(s) 161, 322, 1037
AvaII GGWCC 3 cut(s) 128, 767, 821
BaeGI GKGCMC 1 cut(s) 576
BanI GGYRCC 4 cut(s) 206, 217, 543, 900
BanII GRGCYC 1 cut(s) 763
BarI GAAGNNNNNNTAC 2 cut(s) 1054, 1086
BbsI GAAGAC 2 cut(s) 362, 1118
Bbv12I GWGCWC 1 cut(s) 576
BbvCI CCTCAGC 1 cut(s) 528
BbvI GCAGC 1 cut(s) 328
BccI CCATC 5 cut(s) 184, 260, 434, 975, 1022
BciT130I CCWGG 5 cut(s) 132, 777, 831, 864, 1079
BciVI GTATCC 1 cut(s) 905
BcnI CCSGG 1 cut(s) 1142
BcoDI GTCTC 3 cut(s) 693, 872, 1048
BfaI CTAG 3 cut(s) 600, 1020, 1056
BfmI CTRYAG 1 cut(s) 342
BfrI CTTAAG 1 cut(s) 97
BfuI GTATCC 1 cut(s) 905
BisI GCNGC 1 cut(s) 342
BlpI GCTNAGC 1 cut(s) 747
BlsI GCNGC 1 cut(s) 343
Bme1390I CCNGG 6 cut(s) 132, 777, 831, 864, 1079, 1142
Bme18I GGWCC 3 cut(s) 128, 767, 821
BmgT120I GGNCC 5 cut(s) 8, 128, 767, 821, 1031
BmiI GGNNCC 5 cut(s) 208, 219, 545, 822, 902
BmrFI CCNGG 6 cut(s) 132, 777, 831, 864, 1079, 1142
BmrI ACTGGG 1 cut(s) 1161
BmsI GCATC 2 cut(s) 4, 250
BmuI ACTGGG 1 cut(s) 1161
BpiI GAAGAC 2 cut(s) 362, 1118
BpmI CTGGAG 1 cut(s) 712
Bpu10I CCTNAGC 1 cut(s) 528
Bpu1102I GCTNAGC 1 cut(s) 747
BpuEI CTTGAG 1 cut(s) 747
BpuMI CCSGG 1 cut(s) 1142
Bsa29I ATCGAT 1 cut(s) 495
BsaBI GATNNNNATC 1 cut(s) 372
BsaJI CCNNGG 6 cut(s) 131, 755, 873, 1078, 1141, 1152
Bsc4I CCNNNNNNNGG 6 cut(s) 190, 658, 776, 797, 830, 1147
Bse1I ACTGG 2 cut(s) 1069, 1167
Bse3DI GCAATG 1 cut(s) 850
Bse8I GATNNNNATC 1 cut(s) 372
BseBI CCWGG 5 cut(s) 132, 777, 831, 864, 1079
BseCI ATCGAT 1 cut(s) 495
BseDI CCNNGG 6 cut(s) 131, 755, 873, 1078, 1141, 1152
BseGI GGATG 3 cut(s) 435, 672, 688
BseJI GATNNNNATC 1 cut(s) 372
BseLI CCNNNNNNNGG 6 cut(s) 190, 658, 776, 797, 830, 1147
BseMI GCAATG 1 cut(s) 850
BseMII CTCAG 7 cut(s) 480, 519, 575, 648, 704, 830, 1053
BseNI ACTGG 2 cut(s) 1069, 1167
BseRI GAGGAG 1 cut(s) 126
BseSI GKGCMC 1 cut(s) 576
BseXI GCAGC 1 cut(s) 328
BseYI CCCAGC 1 cut(s) 468
BshFI GGCC 3 cut(s) 9, 1032, 1151
BshNI GGYRCC 4 cut(s) 206, 217, 543, 900
BshVI ATCGAT 1 cut(s) 495
BsiHKAI GWGCWC 1 cut(s) 576
BsiSI CCGG 1 cut(s) 1141
BslFI GGGAC 1 cut(s) 1149
BslI CCNNNNNNNGG 6 cut(s) 190, 658, 776, 797, 830, 1147
BsmAI GTCTC 3 cut(s) 693, 872, 1048
BsmFI GGGAC 1 cut(s) 1149
BsmI GAATGC 1 cut(s) 529
BsnI GGCC 3 cut(s) 9, 1032, 1151
Bsp1286I GDGCHC 2 cut(s) 576, 763
Bsp1407I TGTACA 1 cut(s) 288
Bsp143I GATC 7 cut(s) 312, 367, 492, 496, 1009, 1067, 1127
Bsp1720I GCTNAGC 1 cut(s) 747
BspACI CCGC 3 cut(s) 165, 221, 1023
BspANI GGCC 3 cut(s) 9, 1032, 1151
BspCNI CTCAG 7 cut(s) 481, 520, 576, 649, 703, 829, 1052
BspDI ATCGAT 1 cut(s) 495
BspLI GGNNCC 5 cut(s) 208, 219, 545, 822, 902
BspMAI CTGCAG 1 cut(s) 346
BspPI GGATC 3 cut(s) 307, 1075, 1135
BspT107I GGYRCC 4 cut(s) 206, 217, 543, 900
BspTI CTTAAG 1 cut(s) 97
BsrBI CCGCTC 1 cut(s) 167
BsrDI GCAATG 1 cut(s) 850
BsrGI TGTACA 1 cut(s) 288
BsrI ACTGG 2 cut(s) 1069, 1167
BssECI CCNNGG 6 cut(s) 131, 755, 873, 1078, 1141, 1152
BssMI GATC 7 cut(s) 312, 367, 492, 496, 1009, 1067, 1127
BssT1I CCWWGG 2 cut(s) 873, 1152
Bst2UI CCWGG 5 cut(s) 132, 777, 831, 864, 1079
Bst4CI ACNGT 2 cut(s) 611, 1117
BstAFI CTTAAG 1 cut(s) 97
BstAUI TGTACA 1 cut(s) 288
BstC8I GCNNGC 2 cut(s) 7, 447
BstDEI CTNAG 8 cut(s) 489, 528, 584, 657, 690, 747, 816, 1039
BstDSI CCRYGG 1 cut(s) 755
BstENI CCTNNNNNAGG 1 cut(s) 656
BstF5I GGATG 3 cut(s) 435, 672, 688
BstKTI GATC 7 cut(s) 315, 370, 495, 499, 1012, 1070, 1130
BstMAI GTCTC 3 cut(s) 693, 872, 1048
BstMBI GATC 7 cut(s) 312, 367, 492, 496, 1009, 1067, 1127
BstMWI GCNNNNNNNGC 2 cut(s) 442, 1029
BstNI CCWGG 5 cut(s) 132, 777, 831, 864, 1079
BstSCI CCNGG 6 cut(s) 130, 775, 829, 862, 1077, 1140
BstSFI CTRYAG 1 cut(s) 342
BstSLI GKGCMC 1 cut(s) 576
BstV1I GCAGC 1 cut(s) 328
BstV2I GAAGAC 2 cut(s) 362, 1118
BstX2I RGATCY 1 cut(s) 1067
BstYI RGATCY 1 cut(s) 1067
Bsu15I ATCGAT 1 cut(s) 495
BsuI GTATCC 1 cut(s) 905
BsuRI GGCC 3 cut(s) 9, 1032, 1151
BsuTUI ATCGAT 1 cut(s) 495
BtgI CCRYGG 1 cut(s) 755
BtsCI GGATG 3 cut(s) 435, 672, 688
BtsI GCAGTG 1 cut(s) 336
BtsIMutI CAGTG 3 cut(s) 336, 462, 616
Cac8I GCNNGC 2 cut(s) 7, 447
Cfr13I GGNCC 5 cut(s) 8, 128, 767, 821, 1031
ClaI ATCGAT 1 cut(s) 495
CseI GACGC 1 cut(s) 620
Csp6I GTAC 7 cut(s) 207, 275, 289, 544, 786, 901, 1062
CviAII CATG 4 cut(s) 147, 197, 298, 605
CviQI GTAC 7 cut(s) 207, 275, 289, 544, 786, 901, 1062
DdeI CTNAG 8 cut(s) 489, 528, 584, 657, 690, 747, 816, 1039
DpnI GATC 7 cut(s) 314, 369, 494, 498, 1011, 1069, 1129
DpnII GATC 7 cut(s) 312, 367, 492, 496, 1009, 1067, 1127
Eco130I CCWWGG 2 cut(s) 873, 1152
Eco24I GRGCYC 1 cut(s) 763
Eco47I GGWCC 3 cut(s) 128, 767, 821
Eco57I CTGAAG 3 cut(s) 41, 766, 901
EcoNI CCTNNNNNAGG 1 cut(s) 656
EcoRII CCWGG 5 cut(s) 130, 775, 829, 862, 1077
EcoT14I CCWWGG 2 cut(s) 873, 1152
EcoT38I GRGCYC 1 cut(s) 763
ErhI CCWWGG 2 cut(s) 873, 1152
FaeI CATG 4 cut(s) 150, 200, 301, 608
FaqI GGGAC 1 cut(s) 1149
FatI CATG 4 cut(s) 146, 196, 297, 604
Fnu4HI GCNGC 1 cut(s) 342
FokI GGATG 3 cut(s) 442, 659, 695
FriOI GRGCYC 1 cut(s) 763
Fsp4HI GCNGC 1 cut(s) 342
FspBI CTAG 3 cut(s) 600, 1020, 1056
GluI GCNGC 1 cut(s) 342
GsaI CCCAGC 1 cut(s) 472
GsuI CTGGAG 1 cut(s) 712
HaeIII GGCC 3 cut(s) 9, 1032, 1151
HapII CCGG 1 cut(s) 1141
HgaI GACGC 1 cut(s) 620
Hin1II CATG 4 cut(s) 150, 200, 301, 608
HincII GTYRAC 1 cut(s) 848
HindII GTYRAC 1 cut(s) 848
HinfI GANTC 6 cut(s) 89, 180, 383, 686, 986, 996
HpaII CCGG 1 cut(s) 1141
HphI GGTGA 3 cut(s) 161, 322, 1037
Hpy166II GTNNAC 4 cut(s) 574, 770, 788, 848
Hpy188I TCNGA 9 cut(s) 60, 110, 378, 388, 585, 721, 978, 985, 1075
Hpy188III TCNNGA 3 cut(s) 51, 798, 1125
Hpy8I GTNNAC 4 cut(s) 574, 770, 788, 848
Hpy99I CGWCG 3 cut(s) 206, 507, 636
HpyAV CCTTC 5 cut(s) 23, 27, 182, 550, 657
HpyCH4III ACNGT 2 cut(s) 611, 1117
HpyCH4IV ACGT 1 cut(s) 1060
HpyCH4V TGCA 4 cut(s) 344, 417, 574, 855
HpyF10VI GCNNNNNNNGC 2 cut(s) 442, 1029
HpyF3I CTNAG 8 cut(s) 489, 528, 584, 657, 690, 747, 816, 1039
HpySE526I ACGT 1 cut(s) 1060
Hsp92II CATG 4 cut(s) 150, 200, 301, 608
KpnI GGTACC 3 cut(s) 210, 547, 904
Kzo9I GATC 7 cut(s) 312, 367, 492, 496, 1009, 1067, 1127
LmnI GCTCC 3 cut(s) 22, 113, 565
Lsp1109I GCAGC 1 cut(s) 328
LweI GCATC 2 cut(s) 4, 250
MaeI CTAG 3 cut(s) 600, 1020, 1056
MaeII ACGT 1 cut(s) 1060
MaeIII GTNAC 1 cut(s) 332
MalI GATC 7 cut(s) 314, 369, 494, 498, 1011, 1069, 1129
MbiI CCGCTC 1 cut(s) 167
MboI GATC 7 cut(s) 312, 367, 492, 496, 1009, 1067, 1127
MflI RGATCY 1 cut(s) 1067
MhlI GDGCHC 2 cut(s) 576, 763
MluCI AATT 7 cut(s) 46, 63, 136, 282, 317, 515, 578
MlyI GAGTC 3 cut(s) 695, 995, 1005
MmeI TCCRAC 1 cut(s) 543
MseI TTAA 4 cut(s) 98, 213, 320, 593
MslI CAYNNNNRTG 2 cut(s) 174, 609
MspA1I CMGCKG 2 cut(s) 223, 472
MspCI CTTAAG 1 cut(s) 97
MspI CCGG 1 cut(s) 1141
MspR9I CCNGG 6 cut(s) 132, 777, 831, 864, 1079, 1142
Mva1269I GAATGC 1 cut(s) 529
MvaI CCWGG 5 cut(s) 132, 777, 831, 864, 1079
MwoI GCNNNNNNNGC 2 cut(s) 442, 1029
NciI CCSGG 1 cut(s) 1142
NdeII GATC 7 cut(s) 312, 367, 492, 496, 1009, 1067, 1127
NlaIII CATG 4 cut(s) 150, 200, 301, 608
NlaIV GGNNCC 5 cut(s) 208, 219, 545, 822, 902
NmuCI GTSAC 1 cut(s) 332
OliI CACNNNNGTG 1 cut(s) 174
PctI GAATGC 1 cut(s) 529
PfeI GAWTC 3 cut(s) 89, 180, 383
PflMI CCANNNNNTGG 2 cut(s) 190, 776
PkrI GCNGC 1 cut(s) 343
PleI GAGTC 3 cut(s) 694, 994, 1004
PpsI GAGTC 3 cut(s) 694, 994, 1004
PshBI ATTAAT 1 cut(s) 320
PsiI TTATAA 1 cut(s) 888
Psp6I CCWGG 5 cut(s) 130, 775, 829, 862, 1077
PspFI CCCAGC 1 cut(s) 468
PspGI CCWGG 5 cut(s) 130, 775, 829, 862, 1077
PspN4I GGNNCC 5 cut(s) 208, 219, 545, 822, 902
PspPI GGNCC 5 cut(s) 8, 128, 767, 821, 1031
PstI CTGCAG 1 cut(s) 346
PsuI RGATCY 1 cut(s) 1067
PvuII CAGCTG 1 cut(s) 472
RsaI GTAC 7 cut(s) 208, 276, 290, 545, 787, 902, 1063
RsaNI GTAC 7 cut(s) 207, 275, 289, 544, 786, 901, 1062
RseI CAYNNNNRTG 2 cut(s) 174, 609
SaqAI TTAA 4 cut(s) 98, 213, 320, 593
SatI GCNGC 1 cut(s) 342
Sau3AI GATC 7 cut(s) 312, 367, 492, 496, 1009, 1067, 1127
Sau96I GGNCC 5 cut(s) 8, 128, 767, 821, 1031
SchI GAGTC 3 cut(s) 695, 995, 1005
ScrFI CCNGG 6 cut(s) 132, 777, 831, 864, 1079, 1142
SduI GDGCHC 2 cut(s) 576, 763
SfaNI GCATC 2 cut(s) 4, 250
SfcI CTRYAG 1 cut(s) 342
SinI GGWCC 3 cut(s) 128, 767, 821
SmiMI CAYNNNNRTG 2 cut(s) 174, 609
SmlI CTYRAG 2 cut(s) 97, 762
SmoI CTYRAG 2 cut(s) 97, 762
Sse9I AATT 7 cut(s) 46, 63, 136, 282, 317, 515, 578
SsiI CCGC 3 cut(s) 165, 221, 1023
SspMI CTAG 3 cut(s) 600, 1020, 1056
StyD4I CCNGG 6 cut(s) 130, 775, 829, 862, 1077, 1140
StyI CCWWGG 2 cut(s) 873, 1152
TaaI ACNGT 2 cut(s) 611, 1117
TaiI ACGT 1 cut(s) 1063
TaqI TCGA 2 cut(s) 495, 943
TasI AATT 7 cut(s) 46, 63, 136, 282, 317, 515, 578
TatI WGTACW 3 cut(s) 274, 288, 785
TfiI GAWTC 3 cut(s) 89, 180, 383
Tru1I TTAA 4 cut(s) 98, 213, 320, 593
Tru9I TTAA 4 cut(s) 98, 213, 320, 593
TscAI CASTG 3 cut(s) 343, 462, 616
TseFI GTSAC 1 cut(s) 332
TseI GCWGC 1 cut(s) 341
Tsp45I GTSAC 1 cut(s) 332
TspDTI ATGAA 5 cut(s) 93, 243, 396, 446, 1110
TspGWI ACGGA 2 cut(s) 64, 665
TspRI CASTG 3 cut(s) 343, 462, 616
Van91I CCANNNNNTGG 2 cut(s) 190, 776
Vha464I CTTAAG 1 cut(s) 97
VneI GTGCAC 1 cut(s) 572
VpaK11BI GGWCC 3 cut(s) 128, 767, 821
VspI ATTAAT 1 cut(s) 320
XagI CCTNNNNNAGG 1 cut(s) 656
XcmI CCANNNNNNNNNTGG 2 cut(s) 323, 584
XspI CTAG 3 cut(s) 600, 1020, 1056
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.