Rw6G009640
RLK Family

Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000146
Physical Location & Seq
Forward (+)
16203768 .. 16205095
1328 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G009640.1

Sequence Viewer

Length: 1017 bp
ATGTCCGTTTATCTTCGTGGGATACACAAGATGGGACATGTGACTGGAACAATCAAGGTTCCTAGTGAAGATGACGTGGAGGCTTATGCTAAGTGGGAAGATGATGATGGGTTTGTAATGTCCATTCTATTTAGAGCCATGACTGATGATGTGCTACAGATGGTAGAGGAATGTGAAACTGCTGAGGCAATATGGAAGACGTTGGGAGATCTCTATACCAATGAGTCTGATTTTATACAGGTTCATGAACTGATGTGCAAAGCTGCAGGAATGCAACAGAATGGACAACCAGTGTCAGTGTTTTTTACCAAGCTGAATAATGTATGGGCTGAGACTGACCAGAAGCGTCCTTGCAAGATCAAGAATCAGGAGGATATTACATGGTACCAGAAAGAGAAAGAACTTGAGCAGGTTCATGCATTCTTGAGAGGACTTGATGCGAAACATAATAGTGCCAAGGGAGAGTTGCTCAGAATGTCAGACCCTCCTAGCTTAACCACAGCTTTTACATATATTCGTAAGGATGAATCTCAGCAGGAAAGTCTCAAACAGGCACAAGTTGAAGTTTCTAGCCTAGCCATTCAAGCACCAGCACCTTTACTCCAGCAGCAGCAGCATTCGGTCCCACTCCATCAACAAGGACCTCCACCAGGTTTTGCCCACCGCCCTCGTCCTCAGTGTTCTTATTGCAACGATATTGGGCATGTTCGAGAGACTTGTTGGAAACTGCACCCACATCTTAAACCTAAAAAGCAAGGTTATCGTCCTAAGGCGAAAGCAGCTGCTGTTCAATTGGTTCAAGAACCAGATTTCTATGGAGTGGCTGGACAGGATCATCATACAACAGGTGGGGCTATTCCTACAGCCTCTATAGCTGGTCGTGGTAAGATTGGATCTTCTCACCAGGGAGTTAATTGGTCGGGGGTATCTGAGGGGCAGGTTGTTCCATCTGGATCAGACATACGCAGGGGAGAAACCAGGAGCACAGTCCCGCGCCGCTTTGACTTTGAATTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotran_gag_2

Protein Analysis

338

Amino Acids

37.86

Weight (kDa)

6.4

Isoelectric Point (pI)

44.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 11 - 105 4.4e-09 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000146)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19561 FvH4_1g25371 FvH4_1g25961 FvH4_2g00352 FvH4_2g00861 FvH4_2g04952 FvH4_2g05413 FvH4_2g07531 FvH4_2g08961 FvH4_2g25141 FvH4_2g27292 FvH4_3g18164 FvH4_3g19921 FvH4_3g43870 FvH4_4g14441 FvH4_4g15581 FvH4_4g15582 FvH4_4g16890 FvH4_4g19782 FvH4_4g33444 FvH4_4g33921 FvH4_5g22281 FvH4_5g22282 FvH4_5g32571 FvH4_5g37451 FvH4_5g39631 FvH4_6g04721 FvH4_6g11661 FvH4_6g20571 FvH4_6g32791 FvH4_7g23184
prunus_persica Prupe.1G090900_v2.0.a1 Prupe.1G241200_v2.0.a1 Prupe.1G534100_v2.0.a1 Prupe.3G076700_v2.0.a1 Prupe.4G150800_v2.0.a1 Prupe.4G181800_v2.0.a1 Prupe.4G240900_v2.0.a1 Prupe.4G247600_v2.0.a1 Prupe.6G115900_v2.0.a1 Prupe.6G327500_v2.0.a1 Prupe.8G071700_v2.0.a1
pyrus_communis pycom06g11480 pycom10g08330 pycom15g04320 pycom15g04350 pycom15g12620 pycom2874g00060
rosa_chinensis RchiOBHm_Chr1g0317241 RchiOBHm_Chr1g0341801 RchiOBHm_Chr1g0341931 RchiOBHm_Chr1g0359621 RchiOBHm_Chr2g0113741 RchiOBHm_Chr2g0117261 RchiOBHm_Chr2g0138831 RchiOBHm_Chr2g0141421 RchiOBHm_Chr2g0145281 RchiOBHm_Chr2g0152991 RchiOBHm_Chr3g0448001 RchiOBHm_Chr3g0450981 RchiOBHm_Chr3g0455161 RchiOBHm_Chr3g0457401 RchiOBHm_Chr3g0460001 RchiOBHm_Chr4g0387431 RchiOBHm_Chr4g0388741 RchiOBHm_Chr4g0444201 RchiOBHm_Chr4g0444261 RchiOBHm_Chr5g0010221 RchiOBHm_Chr6g0271721 RchiOBHm_Chr6g0274641 RchiOBHm_Chr6g0294691 RchiOBHm_Chr7g0237031 RchiOBHm_Chr7g0238461 RchiOBHm_Chr7g0239981
rosa_laevigata RLG00000009017
rosa_multiflora Rmu_co7986768.1_g000001 Rmu_co8302239.1_g000001 Rmu_co8485799.1_g000001 Rmu_sc0000061.1_g000013 Rmu_sc0000303.1_g000034 Rmu_sc0000303.1_g000035 Rmu_sc0000315.1_g000017 Rmu_sc0000349.1_g000003 Rmu_sc0000498.1_g000068 Rmu_sc0000508.1_g000014 Rmu_sc0000602.1_g000001 Rmu_sc0000633.1_g000002 Rmu_sc0000638.1_g000030 Rmu_sc0000756.1_g000016 Rmu_sc0000756.1_g000017 Rmu_sc0000785.1_g000037 Rmu_sc0000795.1_g000017 Rmu_sc0000796.1_g000030 Rmu_sc0000863.1_g000023 Rmu_sc0000920.1_g000021 Rmu_sc0000960.1_g000015 Rmu_sc0000982.1_g000102 Rmu_sc0001036.1_g000008 Rmu_sc0001036.1_g000009 Rmu_sc0001643.1_g000029 Rmu_sc0001687.1_g000026 Rmu_sc0001708.1_g000037 Rmu_sc0001768.1_g000015 Rmu_sc0001790.1_g000022 Rmu_sc0002180.1_g000007 Rmu_sc0002211.1_g000006 Rmu_sc0002270.1_g000010 Rmu_sc0002404.1_g000031 Rmu_sc0002858.1_g000016 Rmu_sc0003063.1_g000028 Rmu_sc0003730.1_g000017 Rmu_sc0004087.1_g000020 Rmu_sc0004618.1_g000048 Rmu_sc0004724.1_g000005 Rmu_sc0005167.1_g000036 Rmu_sc0005781.1_g000003 Rmu_sc0005878.1_g000012 Rmu_sc0006011.1_g000003 Rmu_sc0006343.1_g000011 Rmu_sc0006573.1_g000007 Rmu_sc0006599.1_g000007 Rmu_sc0006803.1_g000014 Rmu_sc0006836.1_g000002 Rmu_sc0006849.1_g000002 Rmu_sc0007109.1_g000009 Rmu_sc0009268.1_g000016 Rmu_sc0009618.1_g000017 Rmu_sc0009674.1_g000009 Rmu_sc0010244.1_g000009 Rmu_sc0011151.1_g000004 Rmu_sc0011356.1_g000001 Rmu_sc0011674.1_g000002 Rmu_sc0011778.1_g000016 Rmu_sc0012342.1_g000001 Rmu_sc0012467.1_g000002 Rmu_sc0012574.1_g000003 Rmu_sc0012913.1_g000005 Rmu_sc0013612.1_g000020 Rmu_sc0014824.1_g000001 Rmu_sc0017869.1_g000002 Rmu_sc0018085.1_g000003 Rmu_sc0024789.1_g000001 Rmu_sc0025106.1_g000013 Rmu_sc0034502.1_g000001 Rmu_sc0034547.1_g000001 Rmu_sc0035094.1_g000001 Rmu_sc0035095.1_g000001 Rmu_ssc0000100.1_g000027 Rmu_ssc0000244.1_g000005 Rmu_ssc0000371.1_g000029 Rmu_ssc0000381.1_g000004
rosa_roxburghii Rroxscaffold_1G00015480 Rroxscaffold_1G00023580 Rroxscaffold_1G00039340 Rroxscaffold_1G00047080 Rroxscaffold_2G00095820 Rroxscaffold_2G00125200 Rroxscaffold_2G00128330 Rroxscaffold_3G00270860
rosa_rugosa Rorug06G0120700
rosa_samantha Rh3BG173100 Rh6AG089600 Rh7AG488100 Rh7DG389600
rosa_wichuraiana Rw0G001150 Rw0G001990 Rw0G002010 Rw0G019540 Rw1G013730 Rw1G024110 Rw1G029190 Rw2G018850 Rw2G021090 Rw2G022260 Rw2G023180 Rw2G027280 Rw3G010190 Rw3G020660 Rw3G029380 Rw4G002390 Rw4G002690 Rw4G033260 Rw5G011960 Rw5G023110 Rw5G025250 Rw5G028950 Rw5G033740 Rw5G033950 Rw5G037900 Rw6G009640 Rw6G011620 Rw6G027720 Rw7G010680 Rw7G042070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 400, 928
Acc65I GGTACC 1 cut(s) 384
AccB1I GGYRCC 1 cut(s) 384
AccII CGCG 1 cut(s) 994
AciI CCGC 3 cut(s) 664, 992, 997
AclWI GGATC 3 cut(s) 840, 901, 961
AcsI RAATTY 1 cut(s) 1010
AfaI GTAC 1 cut(s) 386
AfiI CCNNNNNNNGG 1 cut(s) 650
AflIII ACRYGT 1 cut(s) 37
AgsI TTSAA 5 cut(s) 563, 584, 791, 800, 1010
AjiI CACGTC 1 cut(s) 76
AjnI CCWGG 3 cut(s) 649, 903, 977
AluBI AGCT 6 cut(s) 263, 313, 492, 503, 782, 875
AluI AGCT 6 cut(s) 263, 313, 492, 503, 782, 875
Alw21I GWGCWC 1 cut(s) 986
Alw26I GTCTC 3 cut(s) 326, 548, 707
AlwI GGATC 3 cut(s) 840, 901, 961
AlwNI CAGNNNCTG 1 cut(s) 785
ApeKI GCWGC 6 cut(s) 263, 607, 610, 613, 779, 782
ApoI RAATTY 1 cut(s) 1010
Asp718I GGTACC 1 cut(s) 384
AspLEI GCGC 1 cut(s) 996
AspS9I GGNCC 2 cut(s) 622, 641
AsuHPI GGTGA 1 cut(s) 893
AvaII GGWCC 2 cut(s) 622, 641
AxyI CCTNAGG 1 cut(s) 768
BanI GGYRCC 1 cut(s) 384
BbsI GAAGAC 1 cut(s) 203
Bbv12I GWGCWC 1 cut(s) 986
BbvCI CCTCAGC 1 cut(s) 183
BbvI GCAGC 6 cut(s) 250, 619, 622, 625, 769, 791
BccI CCATC 5 cut(s) 25, 101, 154, 639, 955
BcgI CGANNNNNNTGC 2 cut(s) 743, 777
BciT130I CCWGG 3 cut(s) 651, 905, 979
BciVI GTATCC 1 cut(s) 15
BcoDI GTCTC 3 cut(s) 326, 548, 707
BfaI CTAG 4 cut(s) 63, 489, 570, 575
BfmI CTRYAG 4 cut(s) 155, 264, 861, 870
BfuAI ACCTGC 2 cut(s) 400, 928
BfuI GTATCC 1 cut(s) 15
BglII AGATCT 1 cut(s) 208
BisI GCNGC 7 cut(s) 264, 608, 611, 614, 780, 783, 997
BlsI GCNGC 7 cut(s) 265, 609, 612, 615, 781, 784, 998
Bme1390I CCNGG 3 cut(s) 651, 905, 979
Bme18I GGWCC 2 cut(s) 622, 641
BmgBI CACGTC 1 cut(s) 76
BmgT120I GGNCC 2 cut(s) 622, 641
BmiI GGNNCC 3 cut(s) 60, 386, 624
BmrFI CCNGG 3 cut(s) 651, 905, 979
BmsI GCATC 1 cut(s) 427
BpiI GAAGAC 1 cut(s) 203
BplI GAGNNNNNCTC 2 cut(s) 453, 485
BpmI CTGGAG 1 cut(s) 587
Bpu10I CCTNAGC 1 cut(s) 183
BpuEI CTTGAG 2 cut(s) 425, 445
BsaJI CCNNGG 2 cut(s) 456, 904
BsaXI ACNNNNNCTCC 2 cut(s) 585, 615
Bsc4I CCNNNNNNNGG 1 cut(s) 650
Bse1I ACTGG 2 cut(s) 49, 290
Bse21I CCTNAGG 1 cut(s) 768
BseBI CCWGG 3 cut(s) 651, 905, 979
BseDI CCNNGG 2 cut(s) 456, 904
BseGI GGATG 1 cut(s) 529
BseLI CCNNNNNNNGG 1 cut(s) 650
BseMII CTCAG 6 cut(s) 174, 321, 484, 545, 689, 921
BseNI ACTGG 2 cut(s) 49, 290
BseXI GCAGC 6 cut(s) 250, 619, 622, 625, 769, 791
BsgI GTGCAG 1 cut(s) 713
Bsh1236I CGCG 1 cut(s) 994
BshNI GGYRCC 1 cut(s) 384
BsiHKAI GWGCWC 1 cut(s) 986
BslFI GGGAC 3 cut(s) 48, 608, 974
BslI CCNNNNNNNGG 1 cut(s) 650
BsmAI GTCTC 3 cut(s) 326, 548, 707
BsmFI GGGAC 3 cut(s) 48, 608, 974
BsmI GAATGC 3 cut(s) 276, 419, 616
Bsp1286I GDGCHC 1 cut(s) 986
Bsp143I GATC 5 cut(s) 208, 357, 832, 893, 953
BspACI CCGC 3 cut(s) 664, 992, 997
BspCNI CTCAG 6 cut(s) 175, 322, 483, 544, 688, 922
BspFNI CGCG 1 cut(s) 994
BspHI TCATGA 1 cut(s) 244
BspLI GGNNCC 3 cut(s) 60, 386, 624
BspMAI CTGCAG 1 cut(s) 268
BspMI ACCTGC 2 cut(s) 400, 928
BspPI GGATC 3 cut(s) 840, 901, 961
BspT107I GGYRCC 1 cut(s) 384
BsrI ACTGG 2 cut(s) 49, 290
BssECI CCNNGG 2 cut(s) 456, 904
BssMI GATC 5 cut(s) 208, 357, 832, 893, 953
BssT1I CCWWGG 1 cut(s) 456
Bst2UI CCWGG 3 cut(s) 651, 905, 979
Bst4CI ACNGT 1 cut(s) 988
BstDEI CTNAG 8 cut(s) 90, 183, 330, 470, 531, 675, 768, 930
BstENI CCTNNNNNAGG 1 cut(s) 648
BstF5I GGATG 1 cut(s) 529
BstFNI CGCG 1 cut(s) 994
BstHHI GCGC 1 cut(s) 996
BstKTI GATC 5 cut(s) 211, 360, 835, 896, 956
BstMAI GTCTC 3 cut(s) 326, 548, 707
BstMBI GATC 5 cut(s) 208, 357, 832, 893, 953
BstMWI GCNNNNNNNGC 4 cut(s) 584, 613, 779, 872
BstNI CCWGG 3 cut(s) 651, 905, 979
BstNSI RCATGY 2 cut(s) 41, 707
BstSCI CCNGG 3 cut(s) 649, 903, 977
BstSFI CTRYAG 4 cut(s) 155, 264, 861, 870
BstUI CGCG 1 cut(s) 994
BstV1I GCAGC 6 cut(s) 250, 619, 622, 625, 769, 791
BstV2I GAAGAC 1 cut(s) 203
BstX2I RGATCY 2 cut(s) 208, 893
BstYI RGATCY 2 cut(s) 208, 893
Bsu36I CCTNAGG 1 cut(s) 768
BsuI GTATCC 1 cut(s) 15
BtrI CACGTC 1 cut(s) 76
BtsCI GGATG 1 cut(s) 529
BtsIMutI CAGTG 3 cut(s) 297, 303, 683
BveI ACCTGC 2 cut(s) 400, 928
CaiI CAGNNNCTG 1 cut(s) 785
CciI TCATGA 1 cut(s) 244
CfoI GCGC 1 cut(s) 996
Cfr13I GGNCC 2 cut(s) 622, 641
CseI GACGC 1 cut(s) 335
CsiI ACCWGGT 1 cut(s) 649
Csp6I GTAC 1 cut(s) 385
CviAII CATG 6 cut(s) 38, 139, 245, 381, 416, 704
CviQI GTAC 1 cut(s) 385
DdeI CTNAG 8 cut(s) 90, 183, 330, 470, 531, 675, 768, 930
DpnI GATC 5 cut(s) 210, 359, 834, 895, 955
DpnII GATC 5 cut(s) 208, 357, 832, 893, 953
Eco130I CCWWGG 1 cut(s) 456
Eco47I GGWCC 2 cut(s) 622, 641
Eco81I CCTNAGG 1 cut(s) 768
EcoNI CCTNNNNNAGG 1 cut(s) 648
EcoO109I RGGNCCY 1 cut(s) 641
EcoRI GAATTC 1 cut(s) 1010
EcoRII CCWGG 3 cut(s) 649, 903, 977
EcoT14I CCWWGG 1 cut(s) 456
EcoT22I ATGCAT 1 cut(s) 421
ErhI CCWWGG 1 cut(s) 456
FaeI CATG 6 cut(s) 41, 142, 248, 384, 419, 707
FaqI GGGAC 3 cut(s) 48, 608, 974
FatI CATG 6 cut(s) 37, 138, 244, 380, 415, 703
FauI CCCGC 1 cut(s) 999
Fnu4HI GCNGC 7 cut(s) 264, 608, 611, 614, 780, 783, 997
FokI GGATG 1 cut(s) 536
Fsp4HI GCNGC 7 cut(s) 264, 608, 611, 614, 780, 783, 997
FspBI CTAG 4 cut(s) 63, 489, 570, 575
GlaI GCGC 1 cut(s) 995
GluI GCNGC 7 cut(s) 264, 608, 611, 614, 780, 783, 997
GsuI CTGGAG 1 cut(s) 587
HgaI GACGC 1 cut(s) 335
HhaI GCGC 1 cut(s) 996
Hin1II CATG 6 cut(s) 41, 142, 248, 384, 419, 707
Hin6I GCGC 1 cut(s) 994
HinP1I GCGC 1 cut(s) 994
HinfI GANTC 3 cut(s) 224, 364, 527
HphI GGTGA 1 cut(s) 893
Hpy188I TCNGA 6 cut(s) 229, 473, 481, 931, 958, 1016
Hpy188III TCNNGA 7 cut(s) 245, 361, 368, 424, 710, 800, 951
HpyCH4III ACNGT 1 cut(s) 988
HpyCH4IV ACGT 2 cut(s) 75, 200
HpyCH4V TGCA 7 cut(s) 258, 266, 274, 354, 419, 690, 730
HpyF10VI GCNNNNNNNGC 4 cut(s) 584, 613, 779, 872
HpyF3I CTNAG 8 cut(s) 90, 183, 330, 470, 531, 675, 768, 930
HpySE526I ACGT 2 cut(s) 75, 200
Hsp92II CATG 6 cut(s) 41, 142, 248, 384, 419, 707
HspAI GCGC 1 cut(s) 994
KpnI GGTACC 1 cut(s) 388
Kzo9I GATC 5 cut(s) 208, 357, 832, 893, 953
LmnI GCTCC 1 cut(s) 981
Lsp1109I GCAGC 6 cut(s) 250, 619, 622, 625, 769, 791
LweI GCATC 1 cut(s) 427
MabI ACCWGGT 1 cut(s) 649
MaeI CTAG 4 cut(s) 63, 489, 570, 575
MaeII ACGT 2 cut(s) 75, 200
MaeIII GTNAC 1 cut(s) 40
MalI GATC 5 cut(s) 210, 359, 834, 895, 955
MboI GATC 5 cut(s) 208, 357, 832, 893, 953
MboII GAAGA 5 cut(s) 5, 80, 110, 208, 888
MfeI CAATTG 1 cut(s) 791
MflI RGATCY 2 cut(s) 208, 893
MhlI GDGCHC 1 cut(s) 986
MluCI AATT 3 cut(s) 791, 913, 1010
MlyI GAGTC 1 cut(s) 233
MmeI TCCRAC 1 cut(s) 701
Mph1103I ATGCAT 1 cut(s) 421
MseI TTAA 3 cut(s) 494, 741, 912
MslI CAYNNNNRTG 1 cut(s) 450
MspA1I CMGCKG 1 cut(s) 782
MspR9I CCNGG 3 cut(s) 651, 905, 979
MunI CAATTG 1 cut(s) 791
Mva1269I GAATGC 3 cut(s) 276, 419, 616
MvaI CCWGG 3 cut(s) 651, 905, 979
MvnI CGCG 1 cut(s) 994
MwoI GCNNNNNNNGC 4 cut(s) 584, 613, 779, 872
NdeII GATC 5 cut(s) 208, 357, 832, 893, 953
NlaIII CATG 6 cut(s) 41, 142, 248, 384, 419, 707
NlaIV GGNNCC 3 cut(s) 60, 386, 624
NmuCI GTSAC 1 cut(s) 40
NsiI ATGCAT 1 cut(s) 421
NspI RCATGY 2 cut(s) 41, 707
PagI TCATGA 1 cut(s) 244
PciI ACATGT 1 cut(s) 37
PctI GAATGC 3 cut(s) 276, 419, 616
PfeI GAWTC 2 cut(s) 364, 527
PkrI GCNGC 7 cut(s) 265, 609, 612, 615, 781, 784, 998
PleI GAGTC 1 cut(s) 232
PpsI GAGTC 1 cut(s) 232
PpuMI RGGWCCY 1 cut(s) 641
PscI ACATGT 1 cut(s) 37
Psp5II RGGWCCY 1 cut(s) 641
Psp6I CCWGG 3 cut(s) 649, 903, 977
PspGI CCWGG 3 cut(s) 649, 903, 977
PspN4I GGNNCC 3 cut(s) 60, 386, 624
PspPI GGNCC 2 cut(s) 622, 641
PspPPI RGGWCCY 1 cut(s) 641
PstI CTGCAG 1 cut(s) 268
PstNI CAGNNNCTG 1 cut(s) 785
PsuI RGATCY 2 cut(s) 208, 893
PvuII CAGCTG 1 cut(s) 782
RsaI GTAC 1 cut(s) 386
RsaNI GTAC 1 cut(s) 385
RseI CAYNNNNRTG 1 cut(s) 450
SaqAI TTAA 3 cut(s) 494, 741, 912
SatI GCNGC 7 cut(s) 264, 608, 611, 614, 780, 783, 997
Sau3AI GATC 5 cut(s) 208, 357, 832, 893, 953
Sau96I GGNCC 2 cut(s) 622, 641
SchI GAGTC 1 cut(s) 233
ScrFI CCNGG 3 cut(s) 651, 905, 979
SduI GDGCHC 1 cut(s) 986
SexAI ACCWGGT 1 cut(s) 649
SfaNI GCATC 1 cut(s) 427
SfcI CTRYAG 4 cut(s) 155, 264, 861, 870
SinI GGWCC 2 cut(s) 622, 641
SmiMI CAYNNNNRTG 1 cut(s) 450
SmlI CTYRAG 2 cut(s) 404, 424
SmoI CTYRAG 2 cut(s) 404, 424
Sse9I AATT 3 cut(s) 791, 913, 1010
SsiI CCGC 3 cut(s) 664, 992, 997
SspMI CTAG 4 cut(s) 63, 489, 570, 575
StyD4I CCNGG 3 cut(s) 649, 903, 977
StyI CCWWGG 1 cut(s) 456
TaaI ACNGT 1 cut(s) 988
TaiI ACGT 2 cut(s) 78, 203
TaqI TCGA 1 cut(s) 709
TaqII GACCGA 1 cut(s) 610
TasI AATT 3 cut(s) 791, 913, 1010
TauI GCSGC 1 cut(s) 999
TfiI GAWTC 2 cut(s) 364, 527
Tru1I TTAA 3 cut(s) 494, 741, 912
Tru9I TTAA 3 cut(s) 494, 741, 912
TscAI CASTG 3 cut(s) 297, 303, 683
TseFI GTSAC 1 cut(s) 40
TseI GCWGC 6 cut(s) 263, 607, 610, 613, 779, 782
Tsp45I GTSAC 1 cut(s) 40
TspDTI ATGAA 4 cut(s) 233, 261, 404, 540
TspRI CASTG 3 cut(s) 297, 303, 683
VpaK11BI GGWCC 2 cut(s) 622, 641
XagI CCTNNNNNAGG 1 cut(s) 648
XapI RAATTY 1 cut(s) 1010
XceI RCATGY 2 cut(s) 41, 707
XspI CTAG 4 cut(s) 63, 489, 570, 575
Zsp2I ATGCAT 1 cut(s) 421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.