Rmu_sc0001790.1_g000022
RLK Family

Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001790.1
OG0000146
Physical Location & Seq
Forward (+)
95093 .. 100434
5342 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001790.1_g000022.1.cds

Sequence Viewer

Length: 1752 bp
atggcctataacgccagagtgccactctctttggcgttggcgccaagcctacctctgtgtagggtggcgctacgtcttctcgtggggacgtacttcattgcaggcatgtttgcagcatatttgtgcgatctcgtcacattaacagggatcaagatgagacatagtggggacaggccacgacaatttctggctagtgaaaaaatagtggctaatacccgaggcataaaagaatcattttctacaggatctcgacaagacgacaaggaattttgctaccttaggactaatattcttacggccgccatttaccggggcttcagtcgtcagctcccttgtcatcaggtcaccaactttcttgacattccaacactgggcaggcgtcagcccccatacatggtcttacaactttgggagacctgtgttttcggaaaacagtcgctcgaggttggtcaatgcgaccccctttgtgaggaggcaccccttttctctagaaagatcataagtgattcgagctgtaattctgacatcagccttcatctatcaaaaggtcggcggtgtcctctgtctttttcaggtcgtctgttcccttcaaggttaacttcacctgtctacatcagcttcacattcaagaccggcctccatctcttccgattgccctggtcacgtccatctcttcggatcgaattcatcacttcctcgaattcgggtttcccggggtccgtgaagagcacccagatcgtcggcccaggcaccaatctcttccggcaccggtctcgatccagtcccatccggccacctggtccatctccgaccgttctttcgtccacgattgtgcccagacttggctcagtccggcgtcgtcctccggtcgctcgcctcactcggtcggaacagccacattcggtcaactcgatcagagccaactcggtcagagctaactcagtcaactcagtctcactcggtggtaataaaagtgaaggtcagggttctaaggccaatgaggttcagaaagttgaggtctctgttaagagctcagaaggtggttcttttggaggtaccaaactcactggtcctaatttccgaacatggaagaagattatgtccgtttatcttcgtgggatacacaagatgagacatgtgactggaacaatcaaggttcctagtgaagatgacgtggaggcttatgctaagtgggaagatgatgatgggtttgtaatgtccattctatttagagccatgactgatgatgtgctacagatggtagaggaatgtgaaactgctgaggcaatatggaagacgttgggagatctctataccaatgagtctgattttatacaggttcatgaactgatgtgcaatgctgcaggaatgcaacagaatgggcaaccagtgtcagtgttttttaccaagctgaagaatgtatgggctgagattgaccagaagcatccttgcaagatcaagaatcaggaggatattacatggtaccagaaagagaaagaacttgagtgggttcatgcattcttgagaggacttgatgcgaaacatattagtgccaagggagagttgctcagaatgccagaccctcctagcttaaccacagcttttacatatattcgtatggatgaatctcagcaggaaagtcttaaacatgcacaagttgaagtttctagcttagccattcaagcaccagcacctttactccagcagcagcagcattcggttgatgcagctaaaagcaagcgcataatttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotran_gag_2

Protein Analysis

583

Amino Acids

65.14

Weight (kDa)

9.42

Isoelectric Point (pI)

49.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000146)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19561 FvH4_1g25371 FvH4_1g25961 FvH4_2g00352 FvH4_2g00861 FvH4_2g04952 FvH4_2g05413 FvH4_2g07531 FvH4_2g08961 FvH4_2g25141 FvH4_2g27292 FvH4_3g18164 FvH4_3g19921 FvH4_3g43870 FvH4_4g14441 FvH4_4g15581 FvH4_4g15582 FvH4_4g16890 FvH4_4g19782 FvH4_4g33444 FvH4_4g33921 FvH4_5g22281 FvH4_5g22282 FvH4_5g32571 FvH4_5g37451 FvH4_5g39631 FvH4_6g04721 FvH4_6g11661 FvH4_6g20571 FvH4_6g32791 FvH4_7g23184
prunus_persica Prupe.1G090900_v2.0.a1 Prupe.1G241200_v2.0.a1 Prupe.1G534100_v2.0.a1 Prupe.3G076700_v2.0.a1 Prupe.4G150800_v2.0.a1 Prupe.4G181800_v2.0.a1 Prupe.4G240900_v2.0.a1 Prupe.4G247600_v2.0.a1 Prupe.6G115900_v2.0.a1 Prupe.6G327500_v2.0.a1 Prupe.8G071700_v2.0.a1
pyrus_communis pycom06g11480 pycom10g08330 pycom15g04320 pycom15g04350 pycom15g12620 pycom2874g00060
rosa_chinensis RchiOBHm_Chr1g0317241 RchiOBHm_Chr1g0341801 RchiOBHm_Chr1g0341931 RchiOBHm_Chr1g0359621 RchiOBHm_Chr2g0113741 RchiOBHm_Chr2g0117261 RchiOBHm_Chr2g0138831 RchiOBHm_Chr2g0141421 RchiOBHm_Chr2g0145281 RchiOBHm_Chr2g0152991 RchiOBHm_Chr3g0448001 RchiOBHm_Chr3g0450981 RchiOBHm_Chr3g0455161 RchiOBHm_Chr3g0457401 RchiOBHm_Chr3g0460001 RchiOBHm_Chr4g0387431 RchiOBHm_Chr4g0388741 RchiOBHm_Chr4g0444201 RchiOBHm_Chr4g0444261 RchiOBHm_Chr5g0010221 RchiOBHm_Chr6g0271721 RchiOBHm_Chr6g0274641 RchiOBHm_Chr6g0294691 RchiOBHm_Chr7g0237031 RchiOBHm_Chr7g0238461 RchiOBHm_Chr7g0239981
rosa_laevigata RLG00000009017
rosa_multiflora Rmu_co7986768.1_g000001 Rmu_co8302239.1_g000001 Rmu_co8485799.1_g000001 Rmu_sc0000061.1_g000013 Rmu_sc0000303.1_g000034 Rmu_sc0000303.1_g000035 Rmu_sc0000315.1_g000017 Rmu_sc0000349.1_g000003 Rmu_sc0000498.1_g000068 Rmu_sc0000508.1_g000014 Rmu_sc0000602.1_g000001 Rmu_sc0000633.1_g000002 Rmu_sc0000638.1_g000030 Rmu_sc0000756.1_g000016 Rmu_sc0000756.1_g000017 Rmu_sc0000785.1_g000037 Rmu_sc0000795.1_g000017 Rmu_sc0000796.1_g000030 Rmu_sc0000863.1_g000023 Rmu_sc0000920.1_g000021 Rmu_sc0000960.1_g000015 Rmu_sc0000982.1_g000102 Rmu_sc0001036.1_g000008 Rmu_sc0001036.1_g000009 Rmu_sc0001643.1_g000029 Rmu_sc0001687.1_g000026 Rmu_sc0001708.1_g000037 Rmu_sc0001768.1_g000015 Rmu_sc0001790.1_g000022 Rmu_sc0002180.1_g000007 Rmu_sc0002211.1_g000006 Rmu_sc0002270.1_g000010 Rmu_sc0002404.1_g000031 Rmu_sc0002858.1_g000016 Rmu_sc0003063.1_g000028 Rmu_sc0003730.1_g000017 Rmu_sc0004087.1_g000020 Rmu_sc0004618.1_g000048 Rmu_sc0004724.1_g000005 Rmu_sc0005167.1_g000036 Rmu_sc0005781.1_g000003 Rmu_sc0005878.1_g000012 Rmu_sc0006011.1_g000003 Rmu_sc0006343.1_g000011 Rmu_sc0006573.1_g000007 Rmu_sc0006599.1_g000007 Rmu_sc0006803.1_g000014 Rmu_sc0006836.1_g000002 Rmu_sc0006849.1_g000002 Rmu_sc0007109.1_g000009 Rmu_sc0009268.1_g000016 Rmu_sc0009618.1_g000017 Rmu_sc0009674.1_g000009 Rmu_sc0010244.1_g000009 Rmu_sc0011151.1_g000004 Rmu_sc0011356.1_g000001 Rmu_sc0011674.1_g000002 Rmu_sc0011778.1_g000016 Rmu_sc0012342.1_g000001 Rmu_sc0012467.1_g000002 Rmu_sc0012574.1_g000003 Rmu_sc0012913.1_g000005 Rmu_sc0013612.1_g000020 Rmu_sc0014824.1_g000001 Rmu_sc0017869.1_g000002 Rmu_sc0018085.1_g000003 Rmu_sc0024789.1_g000001 Rmu_sc0025106.1_g000013 Rmu_sc0034502.1_g000001 Rmu_sc0034547.1_g000001 Rmu_sc0035094.1_g000001 Rmu_sc0035095.1_g000001 Rmu_ssc0000100.1_g000027 Rmu_ssc0000244.1_g000005 Rmu_ssc0000371.1_g000029 Rmu_ssc0000381.1_g000004
rosa_roxburghii Rroxscaffold_1G00015480 Rroxscaffold_1G00023580 Rroxscaffold_1G00039340 Rroxscaffold_1G00047080 Rroxscaffold_2G00095820 Rroxscaffold_2G00125200 Rroxscaffold_2G00128330 Rroxscaffold_3G00270860
rosa_rugosa Rorug06G0120700
rosa_samantha Rh3BG173100 Rh6AG089600 Rh7AG488100 Rh7DG389600
rosa_wichuraiana Rw0G001150 Rw0G001990 Rw0G002010 Rw0G019540 Rw1G013730 Rw1G024110 Rw1G029190 Rw2G018850 Rw2G021090 Rw2G022260 Rw2G023180 Rw2G027280 Rw3G010190 Rw3G020660 Rw3G029380 Rw4G002390 Rw4G002690 Rw4G033260 Rw5G011960 Rw5G023110 Rw5G025250 Rw5G028950 Rw5G033740 Rw5G033950 Rw5G037900 Rw6G009640 Rw6G011620 Rw6G027720 Rw7G010680 Rw7G042070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 1055, 1482
AccB1I GGYRCC 6 cut(s) 40, 475, 749, 765, 1055, 1482
AccI GTMKAC 1 cut(s) 609
AciI CCGC 2 cut(s) 300, 553
AclWI GGATC 4 cut(s) 155, 253, 686, 771
AcoI YGGCCR 2 cut(s) 297, 791
AcsI RAATTY 3 cut(s) 266, 683, 700
AcuI CTGAAG 2 cut(s) 301, 1433
AcyI GRCGYC 3 cut(s) 41, 379, 856
AdeI CACNNNGTG 1 cut(s) 962
AfaI GTAC 3 cut(s) 92, 1057, 1484
AfiI CCNNNNNNNGG 5 cut(s) 309, 371, 394, 469, 842
AflIII ACRYGT 1 cut(s) 1135
AgeI ACCGGT 1 cut(s) 768
AgsI TTSAA 4 cut(s) 591, 628, 1661, 1682
AjiI CACGTC 2 cut(s) 665, 1174
AjnI CCWGG 3 cut(s) 656, 745, 796
AleI CACNNNNGTG 1 cut(s) 830
Alw21I GWGCWC 2 cut(s) 731, 1034
Alw26I GTCTC 6 cut(s) 151, 407, 777, 958, 1024, 1126
AlwI GGATC 4 cut(s) 155, 253, 686, 771
Ama87I CYCGRG 3 cut(s) 216, 440, 712
AoxI GGCC 7 cut(s) 3, 173, 297, 634, 742, 791, 993
ApeKI GCWGC 6 cut(s) 113, 1361, 1705, 1708, 1711, 1727
ApoI RAATTY 3 cut(s) 266, 683, 700
ArsI GACNNNNNNTTYG 2 cut(s) 802, 834
AsiGI ACCGGT 1 cut(s) 768
Asp718I GGTACC 2 cut(s) 1055, 1482
AspLEI GCGC 3 cut(s) 43, 70, 1743
AspS9I GGNCC 4 cut(s) 717, 743, 800, 1070
AsuC2I CCSGG 3 cut(s) 311, 713, 714
AsuHPI GGTGA 2 cut(s) 337, 594
AvaI CYCGRG 3 cut(s) 216, 440, 712
AvaII GGWCC 3 cut(s) 717, 800, 1070
AxyI CCTNAGG 1 cut(s) 278
BaeGI GKGCMC 1 cut(s) 837
BanI GGYRCC 6 cut(s) 40, 475, 749, 765, 1055, 1482
BanII GRGCYC 1 cut(s) 1034
BauI CACGAG 1 cut(s) 80
BbsI GAAGAC 2 cut(s) 68, 1301
Bbv12I GWGCWC 2 cut(s) 731, 1034
BbvCI CCTCAGC 1 cut(s) 1281
BbvI GCAGC 6 cut(s) 125, 1348, 1717, 1720, 1723, 1739
BccI CCATC 6 cut(s) 648, 676, 794, 811, 1199, 1252
BceAI ACGGC 1 cut(s) 312
BcgI CGANNNNNNTGC 4 cut(s) 718, 752, 755, 789
BciT130I CCWGG 3 cut(s) 658, 747, 798
BciVI GTATCC 1 cut(s) 1113
BcnI CCSGG 3 cut(s) 311, 713, 714
BcoDI GTCTC 6 cut(s) 151, 407, 777, 958, 1024, 1126
BfaI CTAG 5 cut(s) 192, 489, 1161, 1587, 1668
BfmI CTRYAG 3 cut(s) 240, 1253, 1362
BfoI RGCGCY 2 cut(s) 44, 71
BfuI GTATCC 1 cut(s) 1113
BglII AGATCT 1 cut(s) 1306
BisI GCNGC 7 cut(s) 114, 300, 1362, 1706, 1709, 1712, 1728
BlpI GCTNAGC 1 cut(s) 1672
BlsI GCNGC 7 cut(s) 115, 301, 1363, 1707, 1710, 1713, 1729
Bme1390I CCNGG 6 cut(s) 311, 658, 713, 714, 747, 798
Bme18I GGWCC 3 cut(s) 717, 800, 1070
BmeT110I CYCGRG 3 cut(s) 216, 440, 712
BmgBI CACGTC 2 cut(s) 665, 1174
BmgT120I GGNCC 4 cut(s) 717, 743, 800, 1070
BmiI GGNNCC 8 cut(s) 42, 477, 718, 751, 767, 1057, 1158, 1484
BmrFI CCNGG 6 cut(s) 311, 658, 713, 714, 747, 798
BmrI ACTGGG 1 cut(s) 380
BmsI GCATC 3 cut(s) 1453, 1525, 1714
BmuI ACTGGG 1 cut(s) 380
BpiI GAAGAC 2 cut(s) 68, 1301
BplI GAGNNNNNCTC 4 cut(s) 9, 41, 1551, 1583
BpmI CTGGAG 1 cut(s) 1685
Bpu10I CCTNAGC 1 cut(s) 1281
Bpu1102I GCTNAGC 1 cut(s) 1672
BpuEI CTTGAG 2 cut(s) 1523, 1543
BpuMI CCSGG 3 cut(s) 311, 713, 714
BsaHI GRCGYC 3 cut(s) 41, 379, 856
BsaI GGTCTC 3 cut(s) 407, 777, 1024
BsaJI CCNNGG 7 cut(s) 217, 310, 656, 712, 713, 745, 1554
BsaWI WCCGGW 2 cut(s) 768, 865
BsaXI ACNNNNNCTCC 2 cut(s) 1683, 1713
Bsc4I CCNNNNNNNGG 5 cut(s) 309, 371, 394, 469, 842
Bse118I RCCGGY 2 cut(s) 632, 768
Bse1I ACTGG 5 cut(s) 375, 780, 1072, 1147, 1388
Bse21I CCTNAGG 1 cut(s) 278
Bse3DI GCAATG 2 cut(s) 96, 1363
BseBI CCWGG 3 cut(s) 658, 747, 798
BseDI CCNNGG 7 cut(s) 217, 310, 656, 712, 713, 745, 1554
BseGI GGATG 3 cut(s) 786, 1444, 1627
BseLI CCNNNNNNNGG 5 cut(s) 309, 371, 394, 469, 842
BseMI GCAATG 2 cut(s) 96, 1363
BseMII CTCAG 8 cut(s) 861, 954, 963, 1047, 1272, 1419, 1582, 1643
BseNI ACTGG 5 cut(s) 375, 780, 1072, 1147, 1388
BseRI GAGGAG 1 cut(s) 485
BseSI GKGCMC 1 cut(s) 837
BseX3I CGGCCG 1 cut(s) 297
BseXI GCAGC 6 cut(s) 125, 1348, 1717, 1720, 1723, 1739
Bsh1285I CGRYCG 4 cut(s) 300, 813, 870, 887
BshFI GGCC 7 cut(s) 5, 175, 299, 636, 744, 793, 995
BshNI GGYRCC 6 cut(s) 40, 475, 749, 765, 1055, 1482
BshTI ACCGGT 1 cut(s) 768
BsiEI CGRYCG 4 cut(s) 300, 813, 870, 887
BsiHKAI GWGCWC 2 cut(s) 731, 1034
BsiHKCI CYCGRG 3 cut(s) 216, 440, 712
BsiSI CCGG 8 cut(s) 310, 633, 713, 763, 769, 790, 853, 866
BslFI GGGAC 3 cut(s) 100, 182, 768
BslI CCNNNNNNNGG 5 cut(s) 309, 371, 394, 469, 842
BsmAI GTCTC 6 cut(s) 151, 407, 777, 958, 1024, 1126
BsmFI GGGAC 3 cut(s) 100, 182, 768
BsmI GAATGC 4 cut(s) 1374, 1517, 1578, 1714
BsnI GGCC 7 cut(s) 5, 175, 299, 636, 744, 793, 995
Bso31I GGTCTC 3 cut(s) 407, 777, 1024
BsoBI CYCGRG 3 cut(s) 216, 440, 712
Bsp1286I GDGCHC 3 cut(s) 731, 837, 1034
Bsp1720I GCTNAGC 1 cut(s) 1672
BspACI CCGC 2 cut(s) 300, 553
BspANI GGCC 7 cut(s) 5, 175, 299, 636, 744, 793, 995
BspCNI CTCAG 8 cut(s) 860, 953, 962, 1046, 1273, 1420, 1581, 1642
BspHI TCATGA 1 cut(s) 1342
BspLI GGNNCC 8 cut(s) 42, 477, 718, 751, 767, 1057, 1158, 1484
BspMAI CTGCAG 1 cut(s) 1366
BspPI GGATC 4 cut(s) 155, 253, 686, 771
BspQI GCTCTTC 1 cut(s) 719
BspT107I GGYRCC 6 cut(s) 40, 475, 749, 765, 1055, 1482
BspTNI GGTCTC 3 cut(s) 407, 777, 1024
BsrDI GCAATG 2 cut(s) 96, 1363
BsrFI RCCGGY 2 cut(s) 632, 768
BsrI ACTGG 5 cut(s) 375, 780, 1072, 1147, 1388
BssAI RCCGGY 2 cut(s) 632, 768
BssECI CCNNGG 7 cut(s) 217, 310, 656, 712, 713, 745, 1554
BssNI GRCGYC 3 cut(s) 41, 379, 856
BssSI CACGAG 1 cut(s) 80
BssT1I CCWWGG 1 cut(s) 1554
Bst2BI CACGAG 1 cut(s) 80
Bst2UI CCWGG 3 cut(s) 658, 747, 798
Bst4CI ACNGT 2 cut(s) 435, 814
Bst6I CTCTTC 4 cut(s) 650, 678, 719, 764
BstACI GRCGYC 3 cut(s) 41, 379, 856
BstC8I GCNNGC 4 cut(s) 103, 377, 874, 1739
BstEII GGTNACC 1 cut(s) 343
BstENI CCTNNNNNAGG 1 cut(s) 467
BstF5I GGATG 3 cut(s) 786, 1444, 1627
BstH2I RGCGCY 2 cut(s) 44, 71
BstHHI GCGC 3 cut(s) 43, 70, 1743
BstMAI GTCTC 6 cut(s) 151, 407, 777, 958, 1024, 1126
BstMCI CGRYCG 4 cut(s) 300, 813, 870, 887
BstMWI GCNNNNNNNGC 4 cut(s) 11, 1573, 1682, 1711
BstNI CCWGG 3 cut(s) 658, 747, 798
BstNSI RCATGY 3 cut(s) 109, 1139, 1652
BstPI GGTNACC 1 cut(s) 343
BstSCI CCNGG 6 cut(s) 309, 656, 711, 712, 745, 796
BstSFI CTRYAG 3 cut(s) 240, 1253, 1362
BstSLI GKGCMC 1 cut(s) 837
BstV1I GCAGC 6 cut(s) 125, 1348, 1717, 1720, 1723, 1739
BstV2I GAAGAC 2 cut(s) 68, 1301
BstX2I RGATCY 2 cut(s) 245, 1306
BstYI RGATCY 2 cut(s) 245, 1306
BstZI CGGCCG 1 cut(s) 297
Bsu36I CCTNAGG 1 cut(s) 278
BsuI GTATCC 1 cut(s) 1113
BsuRI GGCC 7 cut(s) 5, 175, 299, 636, 744, 793, 995
BtrI CACGTC 2 cut(s) 665, 1174
BtsCI GGATG 3 cut(s) 786, 1444, 1627
BtsIMutI CAGTG 4 cut(s) 368, 1065, 1395, 1401
Cac8I GCNNGC 4 cut(s) 103, 377, 874, 1739
CciI TCATGA 1 cut(s) 1342
CfoI GCGC 3 cut(s) 43, 70, 1743
Cfr10I RCCGGY 2 cut(s) 632, 768
Cfr13I GGNCC 4 cut(s) 717, 743, 800, 1070
Cfr9I CCCGGG 1 cut(s) 712
CseI GACGC 2 cut(s) 368, 845
CsiI ACCWGGT 1 cut(s) 796
Csp6I GTAC 3 cut(s) 91, 1056, 1483
CspAI ACCGGT 1 cut(s) 768
CspCI CAANNNNNGTGG 2 cut(s) 12, 47
CviAII CATG 9 cut(s) 106, 394, 1086, 1136, 1237, 1343, 1479, 1514, 1649
CviQI GTAC 3 cut(s) 91, 1056, 1483
DinI GGCGCC 1 cut(s) 42
DraIII CACNNNGTG 1 cut(s) 962
EaeI YGGCCR 2 cut(s) 297, 791
EagI CGGCCG 1 cut(s) 297
Eam1104I CTCTTC 4 cut(s) 650, 678, 719, 764
EarI CTCTTC 4 cut(s) 650, 678, 719, 764
Ecl136II GAGCTC 1 cut(s) 1032
EclXI CGGCCG 1 cut(s) 297
Eco130I CCWWGG 1 cut(s) 1554
Eco24I GRGCYC 1 cut(s) 1034
Eco31I GGTCTC 3 cut(s) 407, 777, 1024
Eco47I GGWCC 3 cut(s) 717, 800, 1070
Eco52I CGGCCG 1 cut(s) 297
Eco53kI GAGCTC 1 cut(s) 1032
Eco57I CTGAAG 2 cut(s) 301, 1433
Eco81I CCTNAGG 1 cut(s) 278
Eco88I CYCGRG 3 cut(s) 216, 440, 712
Eco91I GGTNACC 1 cut(s) 343
EcoICRI GAGCTC 1 cut(s) 1032
EcoNI CCTNNNNNAGG 1 cut(s) 467
EcoO65I GGTNACC 1 cut(s) 343
EcoRI GAATTC 2 cut(s) 683, 700
EcoRII CCWGG 3 cut(s) 656, 745, 796
EcoT14I CCWWGG 1 cut(s) 1554
EcoT22I ATGCAT 1 cut(s) 1519
EcoT38I GRGCYC 1 cut(s) 1034
EgeI GGCGCC 1 cut(s) 42
EheI GGCGCC 1 cut(s) 42
ErhI CCWWGG 1 cut(s) 1554
FaeI CATG 9 cut(s) 109, 397, 1089, 1139, 1240, 1346, 1482, 1517, 1652
FalI AAGNNNNNCTT 2 cut(s) 583, 615
FaqI GGGAC 3 cut(s) 100, 182, 768
FatI CATG 9 cut(s) 105, 393, 1085, 1135, 1236, 1342, 1478, 1513, 1648
FblI GTMKAC 1 cut(s) 609
Fnu4HI GCNGC 7 cut(s) 114, 300, 1362, 1706, 1709, 1712, 1728
FokI GGATG 3 cut(s) 773, 1431, 1634
FriOI GRGCYC 1 cut(s) 1034
Fsp4HI GCNGC 7 cut(s) 114, 300, 1362, 1706, 1709, 1712, 1728
FspBI CTAG 5 cut(s) 192, 489, 1161, 1587, 1668
GlaI GCGC 3 cut(s) 42, 69, 1742
GluI GCNGC 7 cut(s) 114, 300, 1362, 1706, 1709, 1712, 1728
GsuI CTGGAG 1 cut(s) 1685
HaeII RGCGCY 2 cut(s) 44, 71
HaeIII GGCC 7 cut(s) 5, 175, 299, 636, 744, 793, 995
HapII CCGG 8 cut(s) 310, 633, 713, 763, 769, 790, 853, 866
HgaI GACGC 2 cut(s) 368, 845
HhaI GCGC 3 cut(s) 43, 70, 1743
Hin1I GRCGYC 3 cut(s) 41, 379, 856
Hin1II CATG 9 cut(s) 109, 397, 1089, 1139, 1240, 1346, 1482, 1517, 1652
Hin6I GCGC 3 cut(s) 41, 68, 1741
HinP1I GCGC 3 cut(s) 41, 68, 1741
HincII GTYRAC 3 cut(s) 597, 907, 946
HindII GTYRAC 3 cut(s) 597, 907, 946
HinfI GANTC 5 cut(s) 230, 506, 1322, 1462, 1625
HpaI GTTAAC 1 cut(s) 597
HpaII CCGG 8 cut(s) 310, 633, 713, 763, 769, 790, 853, 866
HphI GGTGA 2 cut(s) 337, 594
Hpy166II GTNNAC 5 cut(s) 597, 610, 825, 907, 946
Hpy8I GTNNAC 5 cut(s) 597, 610, 825, 907, 946
Hpy99I CGWCG 2 cut(s) 743, 861
HpyAV CCTTC 4 cut(s) 542, 597, 971, 1031
HpyCH4III ACNGT 2 cut(s) 435, 814
HpyCH4IV ACGT 5 cut(s) 73, 89, 664, 1173, 1298
HpyCH4V TGCA 9 cut(s) 101, 113, 1356, 1364, 1372, 1452, 1517, 1652, 1727
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 1573, 1682, 1711
HpySE526I ACGT 5 cut(s) 73, 89, 664, 1173, 1298
Hsp92I GRCGYC 3 cut(s) 41, 379, 856
Hsp92II CATG 9 cut(s) 109, 397, 1089, 1139, 1240, 1346, 1482, 1517, 1652
HspAI GCGC 3 cut(s) 41, 68, 1741
KasI GGCGCC 1 cut(s) 40
KpnI GGTACC 2 cut(s) 1059, 1486
KspAI GTTAAC 1 cut(s) 597
LguI GCTCTTC 1 cut(s) 719
LmnI GCTCC 1 cut(s) 333
Lsp1109I GCAGC 6 cut(s) 125, 1348, 1717, 1720, 1723, 1739
LweI GCATC 3 cut(s) 1453, 1525, 1714
MabI ACCWGGT 1 cut(s) 796
MaeI CTAG 5 cut(s) 192, 489, 1161, 1587, 1668
MaeII ACGT 5 cut(s) 73, 89, 664, 1173, 1298
MaeIII GTNAC 4 cut(s) 133, 343, 660, 1138
MflI RGATCY 2 cut(s) 245, 1306
MhlI GDGCHC 3 cut(s) 731, 837, 1034
MluCI AATT 7 cut(s) 182, 266, 517, 683, 700, 1075, 1746
Mly113I GGCGCC 1 cut(s) 41
MlyI GAGTC 1 cut(s) 1331
MmeI TCCRAC 3 cut(s) 389, 833, 867
Mph1103I ATGCAT 1 cut(s) 1519
MseI TTAA 6 cut(s) 140, 596, 1026, 1592, 1644, 1750
MslI CAYNNNNRTG 3 cut(s) 121, 830, 1548
MspI CCGG 8 cut(s) 310, 633, 713, 763, 769, 790, 853, 866
MspR9I CCNGG 6 cut(s) 311, 658, 713, 714, 747, 798
Mva1269I GAATGC 4 cut(s) 1374, 1517, 1578, 1714
MvaI CCWGG 3 cut(s) 658, 747, 798
MwoI GCNNNNNNNGC 4 cut(s) 11, 1573, 1682, 1711
NarI GGCGCC 1 cut(s) 41
NciI CCSGG 3 cut(s) 311, 713, 714
NlaIII CATG 9 cut(s) 109, 397, 1089, 1139, 1240, 1346, 1482, 1517, 1652
NlaIV GGNNCC 8 cut(s) 42, 477, 718, 751, 767, 1057, 1158, 1484
NmuCI GTSAC 4 cut(s) 133, 343, 660, 1138
NsiI ATGCAT 1 cut(s) 1519
NspI RCATGY 3 cut(s) 109, 1139, 1652
OliI CACNNNNGTG 1 cut(s) 830
PaeR7I CTCGAG 1 cut(s) 440
PagI TCATGA 1 cut(s) 1342
PciI ACATGT 1 cut(s) 1135
PciSI GCTCTTC 1 cut(s) 719
PcsI WCGNNNNNNNCGW 1 cut(s) 908
PctI GAATGC 4 cut(s) 1374, 1517, 1578, 1714
PfeI GAWTC 4 cut(s) 230, 506, 1462, 1625
PinAI ACCGGT 1 cut(s) 768
PkrI GCNGC 7 cut(s) 115, 301, 1363, 1707, 1710, 1713, 1729
PleI GAGTC 1 cut(s) 1330
PluTI GGCGCC 1 cut(s) 44
PpsI GAGTC 1 cut(s) 1330
PscI ACATGT 1 cut(s) 1135
Psp124BI GAGCTC 1 cut(s) 1034
Psp6I CCWGG 3 cut(s) 656, 745, 796
PspEI GGTNACC 1 cut(s) 343
PspGI CCWGG 3 cut(s) 656, 745, 796
PspN4I GGNNCC 8 cut(s) 42, 477, 718, 751, 767, 1057, 1158, 1484
PspPI GGNCC 4 cut(s) 717, 743, 800, 1070
PspXI VCTCGAGB 1 cut(s) 440
PstI CTGCAG 1 cut(s) 1366
PsuI RGATCY 2 cut(s) 245, 1306
RsaI GTAC 3 cut(s) 92, 1057, 1484
RsaNI GTAC 3 cut(s) 91, 1056, 1483
RseI CAYNNNNRTG 3 cut(s) 121, 830, 1548
SacI GAGCTC 1 cut(s) 1034
SapI GCTCTTC 1 cut(s) 719
SaqAI TTAA 6 cut(s) 140, 596, 1026, 1592, 1644, 1750
SatI GCNGC 7 cut(s) 114, 300, 1362, 1706, 1709, 1712, 1728
Sau96I GGNCC 4 cut(s) 717, 743, 800, 1070
SchI GAGTC 1 cut(s) 1331
ScrFI CCNGG 6 cut(s) 311, 658, 713, 714, 747, 798
SduI GDGCHC 3 cut(s) 731, 837, 1034
SexAI ACCWGGT 1 cut(s) 796
SfaNI GCATC 3 cut(s) 1453, 1525, 1714
SfcI CTRYAG 3 cut(s) 240, 1253, 1362
SfoI GGCGCC 1 cut(s) 42
Sfr274I CTCGAG 1 cut(s) 440
SinI GGWCC 3 cut(s) 717, 800, 1070
SlaI CTCGAG 1 cut(s) 440
SmaI CCCGGG 1 cut(s) 714
SmiMI CAYNNNNRTG 3 cut(s) 121, 830, 1548
SmlI CTYRAG 3 cut(s) 440, 1502, 1522
SmoI CTYRAG 3 cut(s) 440, 1502, 1522
Sse9I AATT 7 cut(s) 182, 266, 517, 683, 700, 1075, 1746
SsiI CCGC 2 cut(s) 300, 553
SspDI GGCGCC 1 cut(s) 40
SspI AATATT 1 cut(s) 289
SspMI CTAG 5 cut(s) 192, 489, 1161, 1587, 1668
SstI GAGCTC 1 cut(s) 1034
StyD4I CCNGG 6 cut(s) 309, 656, 711, 712, 745, 796
StyI CCWWGG 1 cut(s) 1554
TaaI ACNGT 2 cut(s) 435, 814
TaiI ACGT 5 cut(s) 76, 92, 667, 1176, 1301
TaqI TCGA 7 cut(s) 250, 441, 509, 681, 698, 775, 911
TaqII GACCGA 3 cut(s) 873, 892, 916
TasI AATT 7 cut(s) 182, 266, 517, 683, 700, 1075, 1746
TauI GCSGC 1 cut(s) 302
TfiI GAWTC 4 cut(s) 230, 506, 1462, 1625
Tru1I TTAA 6 cut(s) 140, 596, 1026, 1592, 1644, 1750
Tru9I TTAA 6 cut(s) 140, 596, 1026, 1592, 1644, 1750
TscAI CASTG 4 cut(s) 375, 1072, 1395, 1401
TseFI GTSAC 4 cut(s) 133, 343, 660, 1138
TseI GCWGC 6 cut(s) 113, 1361, 1705, 1708, 1711, 1727
Tsp45I GTSAC 4 cut(s) 133, 343, 660, 1138
TspDTI ATGAA 7 cut(s) 85, 524, 676, 1331, 1359, 1502, 1638
TspGWI ACGGA 2 cut(s) 709, 1093
TspMI CCCGGG 1 cut(s) 712
TspRI CASTG 4 cut(s) 375, 1072, 1395, 1401
VpaK11BI GGWCC 3 cut(s) 717, 800, 1070
XagI CCTNNNNNAGG 1 cut(s) 467
XapI RAATTY 3 cut(s) 266, 683, 700
XbaI TCTAGA 1 cut(s) 488
XceI RCATGY 3 cut(s) 109, 1139, 1652
XhoI CTCGAG 1 cut(s) 440
XmaI CCCGGG 1 cut(s) 712
XmiI GTMKAC 1 cut(s) 609
XspI CTAG 5 cut(s) 192, 489, 1161, 1587, 1668
Zsp2I ATGCAT 1 cut(s) 1519
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.