Rmu_sc0034502.1_g000001
RLK Family

cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0034502.1
Physical Location & Seq
Reverse (-)
2 .. 449
448 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0034502.1_g000001.1.cds

Sequence Viewer

Length: 448 bp
atgcaacagcatgggcaaccagtagctgtgtatttcaccaagctgaagaatgtatgggctgaaattgatcagaagcgtccttgcaagattaagaatcaagaagatcttgtgtggtaccagaaagagaaggagctagaaagggtccatgtatttctgagagggcttgatgagaagcatagcagtgccaagggagaattgcttagaatgacagaccctcctagcctgaacacagcatttacttacatccgtaaggatgagtctcaacaggagagtgtcaaacatgcacagattgacgtctctagcttagccattcaggccaagccaccggcacctttccttcagcagcagagttcagccccatttcatctgcaaggttcaccacaaggtttcaccaatcgccctcgtcctcaatgttcttattgcaacgaccttgggcatgttcgggaga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

149

Amino Acids

17.16

Weight (kDa)

8.78

Isoelectric Point (pI)

51.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000146)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19561 FvH4_1g25371 FvH4_1g25961 FvH4_2g00352 FvH4_2g00861 FvH4_2g04952 FvH4_2g05413 FvH4_2g07531 FvH4_2g08961 FvH4_2g25141 FvH4_2g27292 FvH4_3g18164 FvH4_3g19921 FvH4_3g43870 FvH4_4g14441 FvH4_4g15581 FvH4_4g15582 FvH4_4g16890 FvH4_4g19782 FvH4_4g33444 FvH4_4g33921 FvH4_5g22281 FvH4_5g22282 FvH4_5g32571 FvH4_5g37451 FvH4_5g39631 FvH4_6g04721 FvH4_6g11661 FvH4_6g20571 FvH4_6g32791 FvH4_7g23184
prunus_persica Prupe.1G090900_v2.0.a1 Prupe.1G241200_v2.0.a1 Prupe.1G534100_v2.0.a1 Prupe.3G076700_v2.0.a1 Prupe.4G150800_v2.0.a1 Prupe.4G181800_v2.0.a1 Prupe.4G240900_v2.0.a1 Prupe.4G247600_v2.0.a1 Prupe.6G115900_v2.0.a1 Prupe.6G327500_v2.0.a1 Prupe.8G071700_v2.0.a1
pyrus_communis pycom06g11480 pycom10g08330 pycom15g04320 pycom15g04350 pycom15g12620 pycom2874g00060
rosa_chinensis RchiOBHm_Chr1g0317241 RchiOBHm_Chr1g0341801 RchiOBHm_Chr1g0341931 RchiOBHm_Chr1g0359621 RchiOBHm_Chr2g0113741 RchiOBHm_Chr2g0117261 RchiOBHm_Chr2g0138831 RchiOBHm_Chr2g0141421 RchiOBHm_Chr2g0145281 RchiOBHm_Chr2g0152991 RchiOBHm_Chr3g0448001 RchiOBHm_Chr3g0450981 RchiOBHm_Chr3g0455161 RchiOBHm_Chr3g0457401 RchiOBHm_Chr3g0460001 RchiOBHm_Chr4g0387431 RchiOBHm_Chr4g0388741 RchiOBHm_Chr4g0444201 RchiOBHm_Chr4g0444261 RchiOBHm_Chr5g0010221 RchiOBHm_Chr6g0271721 RchiOBHm_Chr6g0274641 RchiOBHm_Chr6g0294691 RchiOBHm_Chr7g0237031 RchiOBHm_Chr7g0238461 RchiOBHm_Chr7g0239981
rosa_laevigata RLG00000009017
rosa_multiflora Rmu_co7986768.1_g000001 Rmu_co8302239.1_g000001 Rmu_co8485799.1_g000001 Rmu_sc0000061.1_g000013 Rmu_sc0000303.1_g000034 Rmu_sc0000303.1_g000035 Rmu_sc0000315.1_g000017 Rmu_sc0000349.1_g000003 Rmu_sc0000498.1_g000068 Rmu_sc0000508.1_g000014 Rmu_sc0000602.1_g000001 Rmu_sc0000633.1_g000002 Rmu_sc0000638.1_g000030 Rmu_sc0000756.1_g000016 Rmu_sc0000756.1_g000017 Rmu_sc0000785.1_g000037 Rmu_sc0000795.1_g000017 Rmu_sc0000796.1_g000030 Rmu_sc0000863.1_g000023 Rmu_sc0000920.1_g000021 Rmu_sc0000960.1_g000015 Rmu_sc0000982.1_g000102 Rmu_sc0001036.1_g000008 Rmu_sc0001036.1_g000009 Rmu_sc0001643.1_g000029 Rmu_sc0001687.1_g000026 Rmu_sc0001708.1_g000037 Rmu_sc0001768.1_g000015 Rmu_sc0001790.1_g000022 Rmu_sc0002180.1_g000007 Rmu_sc0002211.1_g000006 Rmu_sc0002270.1_g000010 Rmu_sc0002404.1_g000031 Rmu_sc0002858.1_g000016 Rmu_sc0003063.1_g000028 Rmu_sc0003730.1_g000017 Rmu_sc0004087.1_g000020 Rmu_sc0004618.1_g000048 Rmu_sc0004724.1_g000005 Rmu_sc0005167.1_g000036 Rmu_sc0005781.1_g000003 Rmu_sc0005878.1_g000012 Rmu_sc0006011.1_g000003 Rmu_sc0006343.1_g000011 Rmu_sc0006573.1_g000007 Rmu_sc0006599.1_g000007 Rmu_sc0006803.1_g000014 Rmu_sc0006836.1_g000002 Rmu_sc0006849.1_g000002 Rmu_sc0007109.1_g000009 Rmu_sc0009268.1_g000016 Rmu_sc0009618.1_g000017 Rmu_sc0009674.1_g000009 Rmu_sc0010244.1_g000009 Rmu_sc0011151.1_g000004 Rmu_sc0011356.1_g000001 Rmu_sc0011674.1_g000002 Rmu_sc0011778.1_g000016 Rmu_sc0012342.1_g000001 Rmu_sc0012467.1_g000002 Rmu_sc0012574.1_g000003 Rmu_sc0012913.1_g000005 Rmu_sc0013612.1_g000020 Rmu_sc0014824.1_g000001 Rmu_sc0017869.1_g000002 Rmu_sc0018085.1_g000003 Rmu_sc0024789.1_g000001 Rmu_sc0025106.1_g000013 Rmu_sc0034502.1_g000001 Rmu_sc0034547.1_g000001 Rmu_sc0035094.1_g000001 Rmu_sc0035095.1_g000001 Rmu_ssc0000100.1_g000027 Rmu_ssc0000244.1_g000005 Rmu_ssc0000371.1_g000029 Rmu_ssc0000381.1_g000004
rosa_roxburghii Rroxscaffold_1G00015480 Rroxscaffold_1G00023580 Rroxscaffold_1G00039340 Rroxscaffold_1G00047080 Rroxscaffold_2G00095820 Rroxscaffold_2G00125200 Rroxscaffold_2G00128330 Rroxscaffold_3G00270860
rosa_rugosa Rorug06G0120700
rosa_samantha Rh3BG173100 Rh6AG089600 Rh7AG488100 Rh7DG389600
rosa_wichuraiana Rw0G001150 Rw0G001990 Rw0G002010 Rw0G019540 Rw1G013730 Rw1G024110 Rw1G029190 Rw2G018850 Rw2G021090 Rw2G022260 Rw2G023180 Rw2G027280 Rw3G010190 Rw3G020660 Rw3G029380 Rw4G002390 Rw4G002690 Rw4G033260 Rw5G011960 Rw5G023110 Rw5G025250 Rw5G028950 Rw5G033740 Rw5G033950 Rw5G037900 Rw6G009640 Rw6G011620 Rw6G027720 Rw7G010680 Rw7G042070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 297
Acc65I GGTACC 1 cut(s) 114
AccB1I GGYRCC 2 cut(s) 114, 328
AcuI CTGAAG 2 cut(s) 65, 323
AcyI GRCGYC 1 cut(s) 294
AfaI GTAC 1 cut(s) 116
AluBI AGCT 4 cut(s) 26, 43, 133, 303
AluI AGCT 4 cut(s) 26, 43, 133, 303
Alw26I GTCTC 2 cut(s) 264, 301
AlwNI CAGNNNCTG 1 cut(s) 26
AoxI GGCC 1 cut(s) 315
ApeKI GCWGC 1 cut(s) 343
Asp718I GGTACC 1 cut(s) 114
AspS9I GGNCC 1 cut(s) 142
AsuHPI GGTGA 3 cut(s) 28, 369, 382
AvaII GGWCC 1 cut(s) 142
BanI GGYRCC 2 cut(s) 114, 328
BbvI GCAGC 1 cut(s) 355
BclI TGATCA 1 cut(s) 67
BcoDI GTCTC 2 cut(s) 264, 301
BfaI CTAG 3 cut(s) 134, 219, 300
BglI GCCNNNNNGGC 1 cut(s) 314
BglII AGATCT 1 cut(s) 103
BisI GCNGC 1 cut(s) 344
BlpI GCTNAGC 1 cut(s) 304
BlsI GCNGC 1 cut(s) 345
Bme18I GGWCC 1 cut(s) 142
BmgT120I GGNCC 1 cut(s) 142
BmiI GGNNCC 3 cut(s) 116, 143, 330
Bpu1102I GCTNAGC 1 cut(s) 304
BsaHI GRCGYC 1 cut(s) 294
BsaJI CCNNGG 2 cut(s) 186, 430
BsaXI ACNNNNNCTCC 2 cut(s) 199, 229
Bse118I RCCGGY 1 cut(s) 325
Bse1I ACTGG 1 cut(s) 20
BseDI CCNNGG 2 cut(s) 186, 430
BseGI GGATG 2 cut(s) 243, 259
BseMII CTCAG 1 cut(s) 146
BseNI ACTGG 1 cut(s) 20
BseXI GCAGC 1 cut(s) 355
BshFI GGCC 1 cut(s) 317
BshNI GGYRCC 2 cut(s) 114, 328
BsiSI CCGG 1 cut(s) 326
BsmAI GTCTC 2 cut(s) 264, 301
BsmBI CGTCTC 1 cut(s) 301
BsnI GGCC 1 cut(s) 317
Bsp143I GATC 2 cut(s) 67, 103
Bsp1720I GCTNAGC 1 cut(s) 304
BspANI GGCC 1 cut(s) 317
BspCNI CTCAG 1 cut(s) 147
BspLI GGNNCC 3 cut(s) 116, 143, 330
BspT107I GGYRCC 2 cut(s) 114, 328
BsrFI RCCGGY 1 cut(s) 325
BsrI ACTGG 1 cut(s) 20
BssAI RCCGGY 1 cut(s) 325
BssECI CCNNGG 2 cut(s) 186, 430
BssMI GATC 2 cut(s) 67, 103
BssNI GRCGYC 1 cut(s) 294
BssT1I CCWWGG 2 cut(s) 186, 430
BstACI GRCGYC 1 cut(s) 294
BstDEI CTNAG 3 cut(s) 155, 200, 304
BstF5I GGATG 2 cut(s) 243, 259
BstKTI GATC 2 cut(s) 70, 106
BstMAI GTCTC 2 cut(s) 264, 301
BstMBI GATC 2 cut(s) 67, 103
BstMWI GCNNNNNNNGC 1 cut(s) 314
BstNSI RCATGY 2 cut(s) 284, 440
BstV1I GCAGC 1 cut(s) 355
BstX2I RGATCY 1 cut(s) 103
BstYI RGATCY 1 cut(s) 103
BsuRI GGCC 1 cut(s) 317
BtsCI GGATG 2 cut(s) 243, 259
BtsI GCAGTG 1 cut(s) 187
BtsIMutI CAGTG 1 cut(s) 187
CaiI CAGNNNCTG 1 cut(s) 26
Cfr10I RCCGGY 1 cut(s) 325
Cfr13I GGNCC 1 cut(s) 142
CseI GACGC 1 cut(s) 65
Csp6I GTAC 1 cut(s) 115
CviAII CATG 4 cut(s) 11, 146, 281, 437
CviQI GTAC 1 cut(s) 115
DdeI CTNAG 3 cut(s) 155, 200, 304
DpnI GATC 2 cut(s) 69, 105
DpnII GATC 2 cut(s) 67, 103
Eco130I CCWWGG 2 cut(s) 186, 430
Eco47I GGWCC 1 cut(s) 142
Eco57I CTGAAG 2 cut(s) 65, 323
EcoT14I CCWWGG 2 cut(s) 186, 430
ErhI CCWWGG 2 cut(s) 186, 430
Esp3I CGTCTC 1 cut(s) 301
FaeI CATG 4 cut(s) 14, 149, 284, 440
FaiI YATR 6 cut(s) 12, 55, 147, 177, 282, 438
FalI AAGNNNNNCTT 2 cut(s) 90, 122
FatI CATG 4 cut(s) 10, 145, 280, 436
FbaI TGATCA 1 cut(s) 67
Fnu4HI GCNGC 1 cut(s) 344
FokI GGATG 2 cut(s) 230, 266
Fsp4HI GCNGC 1 cut(s) 344
FspBI CTAG 3 cut(s) 134, 219, 300
GluI GCNGC 1 cut(s) 344
HaeIII GGCC 1 cut(s) 317
HapII CCGG 1 cut(s) 326
HgaI GACGC 1 cut(s) 65
Hin1I GRCGYC 1 cut(s) 294
Hin1II CATG 4 cut(s) 14, 149, 284, 440
HinfI GANTC 2 cut(s) 94, 257
HpaII CCGG 1 cut(s) 326
HphI GGTGA 3 cut(s) 28, 369, 382
Hpy166II GTNNAC 1 cut(s) 377
Hpy188I TCNGA 2 cut(s) 72, 156
Hpy188III TCNNGA 2 cut(s) 98, 443
Hpy8I GTNNAC 1 cut(s) 377
HpyAV CCTTC 2 cut(s) 121, 347
HpyCH4IV ACGT 1 cut(s) 294
HpyCH4V TGCA 5 cut(s) 4, 84, 284, 370, 423
HpyF10VI GCNNNNNNNGC 1 cut(s) 314
HpyF3I CTNAG 3 cut(s) 155, 200, 304
HpySE526I ACGT 1 cut(s) 294
Hsp92I GRCGYC 1 cut(s) 294
Hsp92II CATG 4 cut(s) 14, 149, 284, 440
KpnI GGTACC 1 cut(s) 118
Ksp22I TGATCA 1 cut(s) 67
Kzo9I GATC 2 cut(s) 67, 103
LmnI GCTCC 1 cut(s) 130
LpnPI CCDG 6 cut(s) 33, 131, 236, 251, 299, 339
Lsp1109I GCAGC 1 cut(s) 355
MaeI CTAG 3 cut(s) 134, 219, 300
MaeII ACGT 1 cut(s) 294
MalI GATC 2 cut(s) 69, 105
MboI GATC 2 cut(s) 67, 103
MboII GAAGA 2 cut(s) 58, 113
MflI RGATCY 1 cut(s) 103
MluCI AATT 2 cut(s) 63, 194
MlyI GAGTC 1 cut(s) 266
MnlI CCTC 4 cut(s) 152, 225, 411, 417
MseI TTAA 1 cut(s) 90
MslI CAYNNNNRTG 1 cut(s) 180
MspI CCGG 1 cut(s) 326
MwoI GCNNNNNNNGC 1 cut(s) 314
NdeII GATC 2 cut(s) 67, 103
NlaIII CATG 4 cut(s) 14, 149, 284, 440
NlaIV GGNNCC 3 cut(s) 116, 143, 330
NspI RCATGY 2 cut(s) 284, 440
PfeI GAWTC 1 cut(s) 94
PkrI GCNGC 1 cut(s) 345
PleI GAGTC 1 cut(s) 265
PpsI GAGTC 1 cut(s) 265
PspN4I GGNNCC 3 cut(s) 116, 143, 330
PspPI GGNCC 1 cut(s) 142
PstNI CAGNNNCTG 1 cut(s) 26
PsuI RGATCY 1 cut(s) 103
RsaI GTAC 1 cut(s) 116
RsaNI GTAC 1 cut(s) 115
RseI CAYNNNNRTG 1 cut(s) 180
SaqAI TTAA 1 cut(s) 90
SatI GCNGC 1 cut(s) 344
Sau3AI GATC 2 cut(s) 67, 103
Sau96I GGNCC 1 cut(s) 142
SchI GAGTC 1 cut(s) 266
SetI ASST 9 cut(s) 28, 45, 135, 297, 305, 334, 376, 388, 432
SinI GGWCC 1 cut(s) 142
SmiMI CAYNNNNRTG 1 cut(s) 180
Sse9I AATT 2 cut(s) 63, 194
SspMI CTAG 3 cut(s) 134, 219, 300
StyI CCWWGG 2 cut(s) 186, 430
TaiI ACGT 1 cut(s) 297
TasI AATT 2 cut(s) 63, 194
TfiI GAWTC 1 cut(s) 94
Tru1I TTAA 1 cut(s) 90
Tru9I TTAA 1 cut(s) 90
TscAI CASTG 1 cut(s) 187
TseI GCWGC 1 cut(s) 343
TspDTI ATGAA 1 cut(s) 353
TspGWI ACGGA 1 cut(s) 236
TspRI CASTG 1 cut(s) 187
VpaK11BI GGWCC 1 cut(s) 142
XceI RCATGY 2 cut(s) 284, 440
XspI CTAG 3 cut(s) 134, 219, 300
ZraI GACGTC 1 cut(s) 295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.