Rroxscaffold_5G00340590

EF hand

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000286
Physical Location & Seq
Forward (+)
9051613 .. 9064804
13192 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00340590.1

Sequence Viewer

Length: 1305 bp
ATGGCTACACAAGGTGCAGAACAAATCAGCTACACTGTGTTCAACGATTTCTACAAGCAGAATGGCTACGACAAGATTATTAATGATCCACACTTGTTCCACAAACTTGACCGCAGCGGTAATGGCAGCCTCGATTTCTGGGAGATGTTCACCTTCTACTACATCATCCGCTCAAGGTACTTCAACTGCCGAGAATGTCAGGTGTTCCTTAGCGGGTTGTATTTTACCTTCGTTTCTTGCTTTGATGGAGGAGCTCATTATTGCCATCCTCATTCTGATCCCGGCACCTATAATCTATGTGCTGCCTGCTATCGCAGTAGGAATTTCAACACCCTCAACACACATACTCCTTGGATAACCACATATTGCTATGCTCCAAAAGAGGATAAAAATTACCATTATAGCCCCTCCCTTGTTTCTTCTATTATGACTAATTTTATTGGGTGTTTGGCCCATGATCCGGCTACCCGACCACCCACTCCACACCCTGTAGCCGTCGAACGCCAATCGCCAAATATCCACACTGCGTCGTCGCTTAAGAAGAAGAAGAGACATACCCAACCCAGGCCAATGAAGAGAAGCCAAAACCGGGAACCTCCGGATCCCAAGAGCCCTTCCGCAACACCCCGCCGTTCGTCGATGAGGCATGGAGCCACGATCAACGTGGGAACACCATCAAACAGATCGAGTTCCGGCGGAGTTTGGGCAGCTCCGAGATCAAGCGCTGCTTCAAGTTACTGGACAAAACCGGAGACGGCAAGTTGGATTTCAACGAATTCATCACTCGTGGAGAGTGGGAGAGGGGTTTTCTGTGATGGCCATGGATGTAAGGCCTCCCCTTTTCTCAACGGACTGTATTTTACTTGCGTTGAGTGCTTCCACAACGACGAAGCTGCAACGTTCGATCTCTGCACCTCCTGCTACCGCGATGGAAAGTATATTCACAACCATGCCAGCTTTTTGGATAACTACGTCTTGCTGCGTTCCAAGGCTGCTTGTGAATCCACAACACCAACGGAAGATGATCATCATGAGTACCAGCTCGACTTGAGCCAGCACATTACTAAGCCGATGAACGGTGAACTCGGAATTACAGCTATTCTCACCCATGGCGGTGCTAGAAGGTGGCGAAGATTCATGTATTCGGACTTGATCGGTTCTTCTATCTCCGACGTCGCCGAAGCTTCAAATCAACCATGGGGACTTTGCGGCAGCCTCCGGATCAATCGTGGTGGTTGTTTGGATCGATTCGCCCGAAACTTGGTTCAACTCGAATTGAATAGTAATCCACGACTTGTAAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EF-hand_1 EF-hand_5 EF-hand_6 EF-hand_8 ZZ

Protein Analysis

434

Amino Acids

48.9

Weight (kDa)

8.75

Isoelectric Point (pI)

55.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000286)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G13440 AT4G13440
fragaria_vesca FvH4_3g15000 FvH4_3g15000 FvH4_3g15020 FvH4_4g04740 FvH4_4g04740 FvH4_4g04740 FvH4_4g04760 FvH4_4g04850 FvH4_4g04860 FvH4_4g04900 FvH4_4g04980 FvH4_4g04980 FvH4_4g04990 FvH4_4g04990
malus_domestica MD05G1227800.v1.1 MD05G1228500.v1.1
prunus_persica Prupe.1G049600_v2.0.a1 Prupe.1G049700_v2.0.a1 Prupe.1G049800_v2.0.a1 Prupe.1G050000_v2.0.a1 Prupe.1G050100_v2.0.a1 Prupe.4G134500_v2.0.a1 Prupe.6G152600_v2.0.a1
pyrus_communis pycom13g19680 pycom13g19690
rosa_chinensis RchiOBHm_Chr4g0395461 RchiOBHm_Chr4g0395551 RchiOBHm_Chr4g0395571 RchiOBHm_Chr4g0395741 RchiOBHm_Chr4g0395751 RchiOBHm_Chr4g0395781 RchiOBHm_Chr4g0395801 RchiOBHm_Chr4g0397571 RchiOBHm_Chr5g0024631 RchiOBHm_Chr5g0024661
rosa_laevigata RLG00000009594 RLG00000009595 RLG00000009596 RLG00000009607 RLG00000009608 RLG00000009610 RLG00000009612 RLG00000009621 RLG00000032811
rosa_multiflora Rmu_co8376147.1_g000001 Rmu_sc0000041.1_g000020 Rmu_sc0001103.1_g000038 Rmu_sc0001757.1_g000010 Rmu_sc0004598.1_g000029 Rmu_sc0004849.1_g000001 Rmu_sc0005389.1_g000025 Rmu_sc0005431.1_g000010 Rmu_sc0005431.1_g000020 Rmu_sc0005653.1_g000008 Rmu_sc0008351.1_g000022 Rmu_sc0011701.1_g000009
rosa_roxburghii Rroxscaffold_1G00054620 Rroxscaffold_1G00054630 Rroxscaffold_1G00054640 Rroxscaffold_5G00340400 Rroxscaffold_5G00340540 Rroxscaffold_5G00340550 Rroxscaffold_5G00340590 Rroxscaffold_5G00340630 Rroxscaffold_5G00340640 Rroxscaffold_5G00340760
rosa_rugosa Rorug03G0342500 Rorug03G0354500 Rorug03G0355100 Rorug03G0355200 Rorug03G0355300 Rorug03G0356100 Rorug03G0356400 Rorug03G0356500 Rorug05G0084400
rosa_samantha Rh4AG060000 Rh4AG060900 Rh4AG061200 Rh4BG058600 Rh4BG060300 Rh4BG060500 Rh4BG061200 Rh4BG061400 Rh4BG061700 Rh4BG062000 Rh4BG062100 Rh4BG077000 Rh4CG064400 Rh4CG064600 Rh4CG065900 Rh4CG066000 Rh4CG066300 Rh4CG067400 Rh4CG068000 Rh4CG068300 Rh4CG068400 Rh4CG084600 Rh4DG056100 Rh4DG056200 Rh4DG056600 Rh4DG056800 Rh4DG056900 Rh4DG057000 Rh4DG072000 Rh5BG173500 Rh5CG189600 Rh5CG190000
rosa_wichuraiana Rw0G006720 Rw0G022980 Rw0G023000 Rw2G038350 Rw4G004810 Rw4G004850 Rw4G004870 Rw4G004880 Rw4G004990 Rw4G005000 Rw4G005080 Rw4G005110 Rw4G005120 Rw4G005130 Rw4G006450 Rw5G015940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1176
AccB1I GGYRCC 1 cut(s) 284
AccBSI CCGCTC 1 cut(s) 171
AccII CGCG 1 cut(s) 927
AccIII TCCGGA 2 cut(s) 598, 1218
AclI AACGTT 1 cut(s) 899
AclWI GGATC 7 cut(s) 80, 272, 452, 596, 609, 1229, 1251
AcoI YGGCCR 1 cut(s) 817
AcsI RAATTY 2 cut(s) 322, 775
AcyI GRCGYC 1 cut(s) 1173
AdeI CACNNNGTG 1 cut(s) 14
AfaI GTAC 2 cut(s) 179, 1037
AfeI AGCGCT 1 cut(s) 724
AfiI CCNNNNNNNGG 5 cut(s) 460, 564, 589, 1076, 1261
AflII CTTAAG 1 cut(s) 536
AgsI TTSAA 8 cut(s) 43, 184, 328, 732, 771, 1188, 1268, 1279
AjnI CCWGG 1 cut(s) 563
AluBI AGCT 8 cut(s) 30, 254, 710, 893, 957, 1042, 1097, 1184
AluI AGCT 8 cut(s) 30, 254, 710, 893, 957, 1042, 1097, 1184
Alw21I GWGCWC 1 cut(s) 256
Alw26I GTCTC 2 cut(s) 544, 746
AlwI GGATC 7 cut(s) 80, 272, 452, 596, 609, 1229, 1251
Aor13HI TCCGGA 2 cut(s) 598, 1218
Aor51HI AGCGCT 1 cut(s) 724
AoxI GGCC 4 cut(s) 450, 566, 817, 831
ApeKI GCWGC 9 cut(s) 114, 126, 302, 707, 725, 893, 979, 992, 1212
ApoI RAATTY 2 cut(s) 322, 775
AseI ATTAAT 1 cut(s) 81
AspLEI GCGC 1 cut(s) 725
AspS9I GGNCC 1 cut(s) 451
AsuC2I CCSGG 2 cut(s) 282, 590
AsuHPI GGTGA 3 cut(s) 142, 1091, 1096
BalI TGGCCA 1 cut(s) 819
BamHI GGATCC 1 cut(s) 601
BanI GGYRCC 1 cut(s) 284
BanII GRGCYC 2 cut(s) 256, 614
BarI GAAGNNNNNNTAC 2 cut(s) 212, 244
BauI CACGAG 1 cut(s) 785
Bbv12I GWGCWC 1 cut(s) 256
BbvI GCAGC 9 cut(s) 126, 138, 289, 712, 719, 880, 966, 979, 1224
BccI CCATC 5 cut(s) 239, 273, 682, 809, 923
BceAI ACGGC 3 cut(s) 479, 615, 771
BcgI CGANNNNNNTGC 2 cut(s) 875, 909
BciT130I CCWGG 1 cut(s) 565
BclI TGATCA 1 cut(s) 1024
BcnI CCSGG 2 cut(s) 282, 590
BcoDI GTCTC 2 cut(s) 544, 746
BfaI CTAG 1 cut(s) 1119
BfmI CTRYAG 1 cut(s) 489
BfoI RGCGCY 1 cut(s) 726
BfrI CTTAAG 1 cut(s) 536
Bme1390I CCNGG 3 cut(s) 282, 565, 590
BmgT120I GGNCC 1 cut(s) 451
BmiI GGNNCC 4 cut(s) 286, 594, 603, 652
BmrFI CCNGG 3 cut(s) 282, 565, 590
Bpu10I CCTNAGC 1 cut(s) 209
BpuEI CTTGAG 2 cut(s) 157, 1069
BpuMI CCSGG 2 cut(s) 282, 590
Bsa29I ATCGAT 1 cut(s) 1246
BsaBI GATNNNNATC 1 cut(s) 1026
BsaHI GRCGYC 1 cut(s) 1173
BsaJI CCNNGG 6 cut(s) 350, 563, 820, 987, 1108, 1196
BsaWI WCCGGW 3 cut(s) 598, 748, 1218
BsaXI ACNNNNNCTCC 2 cut(s) 331, 361
Bsc4I CCNNNNNNNGG 5 cut(s) 460, 564, 589, 1076, 1261
Bse1I ACTGG 1 cut(s) 743
Bse8I GATNNNNATC 1 cut(s) 1026
BseAI TCCGGA 2 cut(s) 598, 1218
BseBI CCWGG 1 cut(s) 565
BseCI ATCGAT 1 cut(s) 1246
BseDI CCNNGG 6 cut(s) 350, 563, 820, 987, 1108, 1196
BseGI GGATG 3 cut(s) 165, 265, 830
BseJI GATNNNNATC 1 cut(s) 1026
BseLI CCNNNNNNNGG 5 cut(s) 460, 564, 589, 1076, 1261
BseNI ACTGG 1 cut(s) 743
BseRI GAGGAG 1 cut(s) 264
BseXI GCAGC 9 cut(s) 126, 138, 289, 712, 719, 880, 966, 979, 1224
BsgI GTGCAG 2 cut(s) 36, 895
Bsh1236I CGCG 1 cut(s) 927
BshFI GGCC 4 cut(s) 452, 568, 819, 833
BshNI GGYRCC 1 cut(s) 284
BshVI ATCGAT 1 cut(s) 1246
BsiHKAI GWGCWC 1 cut(s) 256
BsiSI CCGG 7 cut(s) 282, 461, 589, 599, 693, 749, 1219
BslFI GGGAC 1 cut(s) 1215
BslI CCNNNNNNNGG 5 cut(s) 460, 564, 589, 1076, 1261
BsmAI GTCTC 2 cut(s) 544, 746
BsmBI CGTCTC 1 cut(s) 746
BsmFI GGGAC 1 cut(s) 1215
BsnI GGCC 4 cut(s) 452, 568, 819, 833
Bsp1286I GDGCHC 2 cut(s) 256, 614
Bsp13I TCCGGA 2 cut(s) 598, 1218
Bsp19I CCATGG 3 cut(s) 820, 1108, 1196
BspANI GGCC 4 cut(s) 452, 568, 819, 833
BspDI ATCGAT 1 cut(s) 1246
BspEI TCCGGA 2 cut(s) 598, 1218
BspFNI CGCG 1 cut(s) 927
BspHI TCATGA 1 cut(s) 1030
BspLI GGNNCC 4 cut(s) 286, 594, 603, 652
BspPI GGATC 7 cut(s) 80, 272, 452, 596, 609, 1229, 1251
BspT107I GGYRCC 1 cut(s) 284
BspTI CTTAAG 1 cut(s) 536
BsrBI CCGCTC 1 cut(s) 171
BsrI ACTGG 1 cut(s) 743
BssECI CCNNGG 6 cut(s) 350, 563, 820, 987, 1108, 1196
BssNI GRCGYC 1 cut(s) 1173
BssSI CACGAG 1 cut(s) 785
BssT1I CCWWGG 5 cut(s) 350, 820, 987, 1108, 1196
Bst2BI CACGAG 1 cut(s) 785
Bst2UI CCWGG 1 cut(s) 565
Bst4CI ACNGT 3 cut(s) 37, 855, 1079
Bst6I CTCTTC 2 cut(s) 542, 569
BstACI GRCGYC 1 cut(s) 1173
BstAFI CTTAAG 1 cut(s) 536
BstAPI GCANNNNNTGC 1 cut(s) 918
BstC8I GCNNGC 3 cut(s) 307, 955, 1055
BstDEI CTNAG 2 cut(s) 209, 1065
BstDSI CCRYGG 3 cut(s) 820, 1108, 1196
BstF5I GGATG 3 cut(s) 165, 265, 830
BstFNI CGCG 1 cut(s) 927
BstH2I RGCGCY 1 cut(s) 726
BstHHI GCGC 1 cut(s) 725
BstMAI GTCTC 2 cut(s) 544, 746
BstMWI GCNNNNNNNGC 3 cut(s) 123, 873, 918
BstNI CCWGG 1 cut(s) 565
BstSCI CCNGG 3 cut(s) 280, 563, 588
BstSFI CTRYAG 1 cut(s) 489
BstUI CGCG 1 cut(s) 927
BstV1I GCAGC 9 cut(s) 126, 138, 289, 712, 719, 880, 966, 979, 1224
BstX2I RGATCY 1 cut(s) 601
BstXI CCANNNNNNTGG 1 cut(s) 961
BstYI RGATCY 1 cut(s) 601
Bsu15I ATCGAT 1 cut(s) 1246
BsuRI GGCC 4 cut(s) 452, 568, 819, 833
BsuTUI ATCGAT 1 cut(s) 1246
BtgI CCRYGG 3 cut(s) 820, 1108, 1196
BtgZI GCGATG 1 cut(s) 942
BtsCI GGATG 3 cut(s) 165, 265, 830
BtsI GCAGTG 1 cut(s) 522
BtsIMutI CAGTG 2 cut(s) 33, 522
Cac8I GCNNGC 3 cut(s) 307, 955, 1055
CciI TCATGA 1 cut(s) 1030
CfoI GCGC 1 cut(s) 725
Cfr13I GGNCC 1 cut(s) 451
ClaI ATCGAT 1 cut(s) 1246
CseI GACGC 1 cut(s) 516
Csp6I GTAC 2 cut(s) 178, 1036
CspCI CAANNNNNGTGG 2 cut(s) 1213, 1248
CviAII CATG 8 cut(s) 455, 647, 821, 950, 1031, 1109, 1138, 1197
CviQI GTAC 2 cut(s) 178, 1036
DdeI CTNAG 2 cut(s) 209, 1065
DraIII CACNNNGTG 1 cut(s) 14
EaeI YGGCCR 1 cut(s) 817
Eam1104I CTCTTC 2 cut(s) 542, 569
EarI CTCTTC 2 cut(s) 542, 569
EciI GGCGGA 1 cut(s) 711
Ecl136II GAGCTC 1 cut(s) 254
Eco130I CCWWGG 5 cut(s) 350, 820, 987, 1108, 1196
Eco147I AGGCCT 1 cut(s) 833
Eco24I GRGCYC 2 cut(s) 256, 614
Eco47III AGCGCT 1 cut(s) 724
Eco53kI GAGCTC 1 cut(s) 254
EcoICRI GAGCTC 1 cut(s) 254
EcoRI GAATTC 1 cut(s) 775
EcoRII CCWGG 1 cut(s) 563
EcoT14I CCWWGG 5 cut(s) 350, 820, 987, 1108, 1196
EcoT38I GRGCYC 2 cut(s) 256, 614
ErhI CCWWGG 5 cut(s) 350, 820, 987, 1108, 1196
Esp3I CGTCTC 1 cut(s) 746
FaeI CATG 8 cut(s) 458, 650, 824, 953, 1034, 1112, 1141, 1200
FalI AAGNNNNNCTT 2 cut(s) 712, 744
FaqI GGGAC 1 cut(s) 1215
FatI CATG 8 cut(s) 454, 646, 820, 949, 1030, 1108, 1137, 1196
FauI CCCGC 2 cut(s) 206, 635
FbaI TGATCA 1 cut(s) 1024
FokI GGATG 3 cut(s) 152, 252, 837
FriOI GRGCYC 2 cut(s) 256, 614
FspBI CTAG 1 cut(s) 1119
GlaI GCGC 1 cut(s) 724
HaeII RGCGCY 1 cut(s) 726
HaeIII GGCC 4 cut(s) 452, 568, 819, 833
HapII CCGG 7 cut(s) 282, 461, 589, 599, 693, 749, 1219
HgaI GACGC 1 cut(s) 516
HhaI GCGC 1 cut(s) 725
Hin1I GRCGYC 1 cut(s) 1173
Hin1II CATG 8 cut(s) 458, 650, 824, 953, 1034, 1112, 1141, 1200
Hin6I GCGC 1 cut(s) 723
HinP1I GCGC 1 cut(s) 723
HindIII AAGCTT 1 cut(s) 1182
HinfI GANTC 3 cut(s) 1001, 1134, 1248
HpaII CCGG 7 cut(s) 282, 461, 589, 599, 693, 749, 1219
HphI GGTGA 3 cut(s) 142, 1091, 1096
Hpy166II GTNNAC 2 cut(s) 150, 1082
Hpy188I TCNGA 5 cut(s) 277, 714, 1088, 1147, 1171
Hpy188III TCNNGA 3 cut(s) 599, 1031, 1219
Hpy8I GTNNAC 2 cut(s) 150, 1082
Hpy99I CGWCG 7 cut(s) 500, 532, 535, 640, 890, 1175, 1178
HpyAV CCTTC 4 cut(s) 163, 238, 624, 1116
HpyCH4III ACNGT 3 cut(s) 37, 855, 1079
HpyCH4IV ACGT 4 cut(s) 663, 899, 972, 1173
HpyCH4V TGCA 3 cut(s) 17, 896, 912
HpyF10VI GCNNNNNNNGC 3 cut(s) 123, 873, 918
HpyF3I CTNAG 2 cut(s) 209, 1065
HpySE526I ACGT 4 cut(s) 663, 899, 972, 1173
Hsp92I GRCGYC 1 cut(s) 1173
Hsp92II CATG 8 cut(s) 458, 650, 824, 953, 1034, 1112, 1141, 1200
HspAI GCGC 1 cut(s) 723
Kpn2I TCCGGA 2 cut(s) 598, 1218
Ksp22I TGATCA 1 cut(s) 1024
LmnI GCTCC 4 cut(s) 251, 379, 650, 715
Lsp1109I GCAGC 9 cut(s) 126, 138, 289, 712, 719, 880, 966, 979, 1224
MaeI CTAG 1 cut(s) 1119
MaeII ACGT 4 cut(s) 663, 899, 972, 1173
MaeIII GTNAC 1 cut(s) 734
MbiI CCGCTC 1 cut(s) 171
MboII GAAGA 8 cut(s) 411, 553, 556, 559, 586, 1031, 1143, 1152
MflI RGATCY 1 cut(s) 601
MhlI GDGCHC 2 cut(s) 256, 614
MlsI TGGCCA 1 cut(s) 819
MluCI AATT 6 cut(s) 322, 391, 433, 775, 1089, 1274
MluNI TGGCCA 1 cut(s) 819
MmeI TCCRAC 2 cut(s) 743, 1194
Mox20I TGGCCA 1 cut(s) 819
MroI TCCGGA 2 cut(s) 598, 1218
MscI TGGCCA 1 cut(s) 819
MseI TTAA 2 cut(s) 81, 537
MslI CAYNNNNRTG 2 cut(s) 948, 1113
Msp20I TGGCCA 1 cut(s) 819
MspA1I CMGCKG 1 cut(s) 117
MspCI CTTAAG 1 cut(s) 536
MspI CCGG 7 cut(s) 282, 461, 589, 599, 693, 749, 1219
MspR9I CCNGG 3 cut(s) 282, 565, 590
MvaI CCWGG 1 cut(s) 565
MvnI CGCG 1 cut(s) 927
MwoI GCNNNNNNNGC 3 cut(s) 123, 873, 918
NciI CCSGG 2 cut(s) 282, 590
NcoI CCATGG 3 cut(s) 820, 1108, 1196
NlaIII CATG 8 cut(s) 458, 650, 824, 953, 1034, 1112, 1141, 1200
NlaIV GGNNCC 4 cut(s) 286, 594, 603, 652
NmeAIII GCCGAG 1 cut(s) 215
PagI TCATGA 1 cut(s) 1030
PceI AGGCCT 1 cut(s) 833
PcsI WCGNNNNNNNCGW 1 cut(s) 1252
PfeI GAWTC 3 cut(s) 1001, 1134, 1248
PshBI ATTAAT 1 cut(s) 81
Psp124BI GAGCTC 1 cut(s) 256
Psp1406I AACGTT 1 cut(s) 899
Psp6I CCWGG 1 cut(s) 563
PspGI CCWGG 1 cut(s) 563
PspN4I GGNNCC 4 cut(s) 286, 594, 603, 652
PspPI GGNCC 1 cut(s) 451
PsuI RGATCY 1 cut(s) 601
RsaI GTAC 2 cut(s) 179, 1037
RsaNI GTAC 2 cut(s) 178, 1036
RseI CAYNNNNRTG 2 cut(s) 948, 1113
SacI GAGCTC 1 cut(s) 256
SaqAI TTAA 2 cut(s) 81, 537
Sau96I GGNCC 1 cut(s) 451
ScrFI CCNGG 3 cut(s) 282, 565, 590
SduI GDGCHC 2 cut(s) 256, 614
SfcI CTRYAG 1 cut(s) 489
SmiMI CAYNNNNRTG 2 cut(s) 948, 1113
SmlI CTYRAG 3 cut(s) 172, 536, 1048
SmoI CTYRAG 3 cut(s) 172, 536, 1048
Sse9I AATT 6 cut(s) 322, 391, 433, 775, 1089, 1274
SseBI AGGCCT 1 cut(s) 833
SspMI CTAG 1 cut(s) 1119
SstI GAGCTC 1 cut(s) 256
StuI AGGCCT 1 cut(s) 833
StyD4I CCNGG 3 cut(s) 280, 563, 588
StyI CCWWGG 5 cut(s) 350, 820, 987, 1108, 1196
TaaI ACNGT 3 cut(s) 37, 855, 1079
TaiI ACGT 4 cut(s) 666, 902, 975, 1176
TaqI TCGA 8 cut(s) 132, 498, 638, 686, 903, 1044, 1246, 1272
TasI AATT 6 cut(s) 322, 391, 433, 775, 1089, 1274
TauI GCSGC 1 cut(s) 1212
TfiI GAWTC 3 cut(s) 1001, 1134, 1248
Tru1I TTAA 2 cut(s) 81, 537
Tru9I TTAA 2 cut(s) 81, 537
TscAI CASTG 2 cut(s) 40, 529
TseI GCWGC 9 cut(s) 114, 126, 302, 707, 725, 893, 979, 992, 1212
TspDTI ATGAA 4 cut(s) 587, 768, 1088, 1126
TspGWI ACGGA 2 cut(s) 864, 1031
TspRI CASTG 2 cut(s) 40, 529
Vha464I CTTAAG 1 cut(s) 536
VspI ATTAAT 1 cut(s) 81
XapI RAATTY 2 cut(s) 322, 775
XcmI CCANNNNNNNNNTGG 1 cut(s) 661
XspI CTAG 1 cut(s) 1119
ZraI GACGTC 1 cut(s) 1174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.