FvH4_3g29860

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000274
Physical Location & Seq
Forward (+)
22942985 .. 22946683
3699 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g29860.t1

Sequence Viewer

Length: 2001 bp
ATGAGAAGCATGGCAGAGGACTATGAATCAAGGCAGACAGAACTACAGGAGAAGATGGAAAATGCAGTACAGGATTTGATGATTGAGAGGTTAATTAACAATGAAACAAGGTTGCAGAATGAAAAACTCAATGAAGAACTGAAGAAGTTGCAAGCTTTGGTGGCGGCATTAGCACCAAACTCTCAAGATGAGAGAGCTCTGGAAAGCAATGAAGATGATCAGGATCCTGAAGGAGGAGCAAACAAGGGAGGAAAAAACAATGAAGATCTGAAGGACAAGGAAGCTGATAAGGCAGCTGAAAAAGATGATGATAAGGAAGCGGATAAGGATCCTGAAGGAACTGGCAAGGAAGATGAAGCAGCTGAGAAAATGGAGGGGGAGGAGGAGAAAGATGCCAATGCTGAAGATAAGAGTGAGGCAGCAGCGAACATAGCTCAGCTTTCAATGCAAAATTCGGAAGAATTAGATCTTCAAGCATTAGAAGAGGTTGAGAGAGAGCTAAAAAAAAACATGGCCGATGAGGATGATAAAGAGAAGGAAGAGGCAACAGAGAAAGTTGCAAGCGCTCATAAAAAAGAGATGAGTGAGCCTCAGATTCCAACCCAAAATTCAGAAGACTTATATGTTGAAGAATTAGAACGGGTTGAGGAAGAGCTTAAAAAGAAGAAGAAAGCAGACGATGAAACGAAGGCTTACAGTGAGCAACCACCAGAGTCACCACCAAGGAGGACGGTTGCGGAAGAAGCGCGTTGGTCGCCGAAAACACCAGTGACAGAGATGCCTTCTTTTGATTTGGGAATCTCTCCCTGGATATCTTGGAATAGCCCATTGGTGACTGGAATAATAACCATACCAGAGAAGAATTTCAATACTCCCTCTAGCCCTCAAATCATTGACCTTACGATGATGGAACGAGAACCTGCAAAATACCAGATGATCGTCTCTCCACAGGTAGCAGTTCCTGTCATTAATCTAGATGAAGAGGAGAGTGATATTGAGATTGAGCTGACAGAGGAAAACTCTGGAAGGACAGCATCATCCTTGGGGATGTATTCATATGTTGCTCGGATCAAGAACAAGCAGAGAAGGCCGGCTAAAAGAGATGATATATACTGGTGGGGGGAGGTTAAAAACACCAGAGAGAAGAAGGCCAGAGAAATAGCAGAAGAAAGGAAGAAAAATCTGGAGCAGAAGAACAAGATAGCTGAAGGAGAAGAACTGAACGAGTATGGAGATGTAATTCATACTATTGGTGCTGATGAAATGGAACCAATGCCAATACAGATTGTGTGCCAACCACCGCGAGAGCAATACGGAGACTTCATATGGGAAGGCCCATTGTATGGTTCAGAGATTACAAAGCTTGATCTGCTGGAGGTTATAATGGACAACGCAGTGGCATGCAATGTAATAGACTGCTTTGGTGCCATTATAGCTGACGAAATTTCTCAGCAAGATTCTCAGTCTATCGTTGTTCCTAGGGTTATGCAGACCATAGCATGGCACTCAACAGAACATCTTCATGGAAGGAACATGCACCACTACTTCCTTGACAAGTTATATGACTACTTGGGAGAAGCGACGATGATTTTCTTTCCAATGACAAGTGAAGCAACTATGGTTGAGTTATGGATGTCTGCAGTCAAAGAACAAGCAGATGACATGCTGAAGAAAGGCTCCCGCAGAAAAATGGACATGAACAGGAGCAGTTCAGAGAAGCTTGTAATGAAAAAAGTAAAGCTTACGGAGAGAGAGAGAAAGTCCATACAATGGGTCAAGAATAACTATATTGAAAACATCCCGATCAGTTGTCAAATAAATGGACCACTACCTCAGCAACGTCCCACATCATTGGATTGTGGGATATTCGTTATGTACTATATGGACAAACTTTCCAAGGAGGAAACGTTTGACAGAACACTGAAGAAGAATGATGTTTTGAAGCTTAGAGCAGAAGTGCGTGCCGCTGCACCGCAACGGCAGCGTCCCGCTGCGTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

667

Amino Acids

76.28

Weight (kDa)

4.71

Isoelectric Point (pI)

60.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000274)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06730 FvH4_3g06731 FvH4_3g17150 FvH4_3g24490 FvH4_3g24741 FvH4_3g25201 FvH4_3g29860 FvH4_3g33300 FvH4_3g33780 FvH4_4g04830 FvH4_4g04901 FvH4_4g04910 FvH4_4g09190 FvH4_4g09870 FvH4_4g09880 FvH4_4g10501 FvH4_4g10502 FvH4_4g16800 FvH4_4g16810 FvH4_5g33260 FvH4_6g06051 FvH4_6g06060 FvH4_6g06060 FvH4_6g22011 FvH4_6g34230 FvH4_6g34231 FvH4_6g36690 FvH4_6g36710 FvH4_6g36720 FvH4_6g36740 FvH4_6g36750 FvH4_6g39110 FvH4_7g04250 FvH4_7g04250 FvH4_7g04380 FvH4_7g04390 FvH4_7g09690 FvH4_7g32810 FvH4_7g32820
pyrus_communis pycom02g10120
rosa_chinensis RchiOBHm_Chr0c39g0503121 RchiOBHm_Chr1g0327221 RchiOBHm_Chr1g0358931 RchiOBHm_Chr1g0358941 RchiOBHm_Chr3g0467921 RchiOBHm_Chr4g0402241 RchiOBHm_Chr6g0280581 RchiOBHm_Chr6g0298971 RchiOBHm_Chr7g0226761 RchiOBHm_Chr7g0226841 RchiOBHm_Chr7g0238631 RchiOBHm_Chr7g0243901
rosa_laevigata RLG00000015279 RLG00000029539
rosa_multiflora Rmu_co8451743.1_g000001 Rmu_sc0000270.1_g000001 Rmu_sc0000532.1_g000016 Rmu_sc0000885.1_g000002 Rmu_sc0001913.1_g000026 Rmu_sc0002080.1_g000032 Rmu_sc0002202.1_g000003 Rmu_sc0002202.1_g000006 Rmu_sc0005023.1_g000028 Rmu_sc0006388.1_g000017 Rmu_sc0011497.1_g000007 Rmu_sc0019088.1_g000001 Rmu_ssc0000064.1_g000017 Rmu_ssc0000170.1_g000013
rosa_roxburghii Rroxscaffold_1G00003820 Rroxscaffold_1G00015970 Rroxscaffold_1G00020360 Rroxscaffold_1G00064040 Rroxscaffold_1G00064120 Rroxscaffold_2G00086010 Rroxscaffold_2G00086020 Rroxscaffold_2G00095500 Rroxscaffold_2G00095510 Rroxscaffold_2G00102440 Rroxscaffold_2G00102970 Rroxscaffold_3G00231570 Rroxscaffold_3G00231830 Rroxscaffold_3G00250710 Rroxscaffold_3G00259420 Rroxscaffold_4G00277040 Rroxscaffold_4G00289320 Rroxscaffold_4G00289330 Rroxscaffold_4G00300150 Rroxscaffold_4G00328410 Rroxscaffold_5G00339120 Rroxscaffold_5G00349810 Rroxscaffold_5G00353990 Rroxscaffold_5G00366720 Rroxscaffold_5G00371400 Rroxscaffold_6G00411690 Rroxscaffold_6G00422190 Rroxscaffold_7G00157730 Rroxscaffold_7G00194130 Rroxscaffold_7G00196760 Rroxscaffold_7G00196770 Rroxscaffold_7G00208770
rosa_rugosa Rorug01G0230300 Rorug01G0261600 Rorug01G0360700 Rorug01G0489500 Rorug02G0176000 Rorug02G0337500 Rorug02G0570100 Rorug03G0270700 Rorug04G0114700 Rorug04G0130400 Rorug05G0073400 Rorug05G0565300 Rorug05G0565300
rosa_samantha Rh2BG158000 Rh2DG158000 Rh3AG113900 Rh3BG116900 Rh3CG119800 Rh3DG118800 Rh4BG396700 Rh5BG187400 Rh5BG211200 Rh7AG238800 Rh7AG300700 Rh7BG277000 Rh7CG068900 Rh7CG319200 Rh7CG472000 Rh7DG244600 Rh7DG475400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1382
Acc36I ACCTGC 1 cut(s) 928
AccB1I GGYRCC 1 cut(s) 1424
AccB7I CCANNNNNTGG 3 cut(s) 1343, 1500, 1770
AccII CGCG 2 cut(s) 748, 1303
AciI CCGC 8 cut(s) 164, 320, 737, 1301, 1681, 1965, 1973, 1989
AclI AACGTT 1 cut(s) 1907
AclWI GGATC 5 cut(s) 218, 231, 323, 336, 1076
AcoI YGGCCR 1 cut(s) 513
AcsI RAATTY 4 cut(s) 451, 607, 862, 1443
AcuI CTGAAG 8 cut(s) 161, 249, 290, 354, 423, 1227, 1688, 1943
AfaI GTAC 2 cut(s) 69, 1877
AfeI AGCGCT 1 cut(s) 565
AfiI CCNNNNNNNGG 4 cut(s) 233, 1343, 1500, 1770
AgsI TTSAA 6 cut(s) 444, 473, 629, 868, 1793, 1942
AjnI CCWGG 1 cut(s) 806
AjuI GAANNNNNNNTTGG 4 cut(s) 592, 624, 812, 844
Alw21I GWGCWC 1 cut(s) 199
Alw26I GTCTC 2 cut(s) 946, 1311
AlwI GGATC 5 cut(s) 218, 231, 323, 336, 1076
AlwNI CAGNNNCTG 1 cut(s) 962
Aor51HI AGCGCT 1 cut(s) 565
AoxI GGCC 4 cut(s) 513, 1088, 1149, 1333
ApeKI GCWGC 7 cut(s) 293, 359, 419, 422, 1967, 1981, 1991
ApoI RAATTY 4 cut(s) 451, 607, 862, 1443
AseI ATTAAT 1 cut(s) 969
Asp700I GAANNNNTTC 2 cut(s) 863, 1518
AspA2I CCTAGG 1 cut(s) 1478
AspLEI GCGC 2 cut(s) 566, 748
AspS9I GGNCC 2 cut(s) 1334, 1823
AsuHPI GGTGA 2 cut(s) 708, 844
AvaII GGWCC 1 cut(s) 1823
AvrII CCTAGG 1 cut(s) 1478
BamHI GGATCC 2 cut(s) 223, 328
BanI GGYRCC 1 cut(s) 1424
BanII GRGCYC 1 cut(s) 199
BbsI GAAGAC 1 cut(s) 621
Bbv12I GWGCWC 1 cut(s) 199
BbvCI CCTCAGC 1 cut(s) 1833
BbvI GCAGC 7 cut(s) 305, 371, 431, 434, 1954, 1978, 1993
BccI CCATC 2 cut(s) 49, 901
BceAI ACGGC 1 cut(s) 1994
BciT130I CCWGG 1 cut(s) 808
BclI TGATCA 1 cut(s) 217
BcoDI GTCTC 2 cut(s) 946, 1311
BfaI CTAG 3 cut(s) 879, 974, 1479
BfmI CTRYAG 2 cut(s) 44, 1638
BfoI RGCGCY 1 cut(s) 567
BfuAI ACCTGC 1 cut(s) 928
BglII AGATCT 2 cut(s) 265, 466
BisI GCNGC 9 cut(s) 165, 294, 360, 420, 423, 1965, 1968, 1982, 1992
BlnI CCTAGG 1 cut(s) 1478
BlpI GCTNAGC 1 cut(s) 435
BlsI GCNGC 9 cut(s) 166, 295, 361, 421, 424, 1966, 1969, 1983, 1993
Bme1390I CCNGG 1 cut(s) 808
Bme18I GGWCC 1 cut(s) 1823
BmgT120I GGNCC 2 cut(s) 1334, 1823
BmiI GGNNCC 5 cut(s) 225, 330, 1269, 1426, 1678
BmrFI CCNGG 1 cut(s) 808
BmsI GCATC 3 cut(s) 382, 768, 1043
BpiI GAAGAC 1 cut(s) 621
BplI GAGNNNNNCTC 4 cut(s) 574, 606, 1004, 1036
BpmI CTGGAG 2 cut(s) 1205, 1394
Bpu10I CCTNAGC 1 cut(s) 1833
Bpu1102I GCTNAGC 1 cut(s) 435
BpuEI CTTGAG 1 cut(s) 168
BsaBI GATNNNNATC 2 cut(s) 222, 327
BsaJI CCNNGG 5 cut(s) 722, 806, 1041, 1478, 1896
BsaXI ACNNNNNCTCC 2 cut(s) 1892, 1922
Bsc4I CCNNNNNNNGG 4 cut(s) 233, 1343, 1500, 1770
Bse118I RCCGGY 1 cut(s) 1090
Bse1I ACTGG 4 cut(s) 346, 767, 841, 1118
Bse3DI GCAATG 2 cut(s) 214, 1411
Bse8I GATNNNNATC 2 cut(s) 222, 327
BseBI CCWGG 1 cut(s) 808
BseDI CCNNGG 5 cut(s) 722, 806, 1041, 1478, 1896
BseGI GGATG 5 cut(s) 529, 1037, 1053, 1638, 1797
BseJI GATNNNNATC 2 cut(s) 222, 327
BseLI CCNNNNNNNGG 4 cut(s) 233, 1343, 1500, 1770
BseMI GCAATG 2 cut(s) 214, 1411
BseMII CTCAG 6 cut(s) 354, 449, 605, 1463, 1475, 1847
BseNI ACTGG 4 cut(s) 346, 767, 841, 1118
BseRI GAGGAG 4 cut(s) 249, 395, 398, 998
BseXI GCAGC 7 cut(s) 305, 371, 431, 434, 1954, 1978, 1993
BsgI GTGCAG 1 cut(s) 1953
Bsh1236I CGCG 2 cut(s) 748, 1303
BshFI GGCC 4 cut(s) 515, 1090, 1151, 1335
BshNI GGYRCC 1 cut(s) 1424
BsiHKAI GWGCWC 1 cut(s) 199
BsiSI CCGG 1 cut(s) 1091
BslFI GGGAC 2 cut(s) 1827, 1971
BslI CCNNNNNNNGG 4 cut(s) 233, 1343, 1500, 1770
BsmAI GTCTC 2 cut(s) 946, 1311
BsmBI CGTCTC 1 cut(s) 946
BsmFI GGGAC 2 cut(s) 1827, 1971
BsnI GGCC 4 cut(s) 515, 1090, 1151, 1335
Bsp1286I GDGCHC 1 cut(s) 199
Bsp143I GATC 9 cut(s) 217, 223, 265, 328, 466, 936, 1068, 1366, 1803
Bsp1720I GCTNAGC 1 cut(s) 435
BspACI CCGC 8 cut(s) 164, 320, 737, 1301, 1681, 1965, 1973, 1989
BspANI GGCC 4 cut(s) 515, 1090, 1151, 1335
BspCNI CTCAG 6 cut(s) 355, 448, 604, 1462, 1474, 1846
BspFNI CGCG 2 cut(s) 748, 1303
BspLI GGNNCC 5 cut(s) 225, 330, 1269, 1426, 1678
BspMAI CTGCAG 1 cut(s) 1642
BspMI ACCTGC 1 cut(s) 928
BspPI GGATC 5 cut(s) 218, 231, 323, 336, 1076
BspQI GCTCTTC 1 cut(s) 645
BspT107I GGYRCC 1 cut(s) 1424
BsrDI GCAATG 2 cut(s) 214, 1411
BsrFI RCCGGY 1 cut(s) 1090
BsrI ACTGG 4 cut(s) 346, 767, 841, 1118
BssAI RCCGGY 1 cut(s) 1090
BssECI CCNNGG 5 cut(s) 722, 806, 1041, 1478, 1896
BssMI GATC 9 cut(s) 217, 223, 265, 328, 466, 936, 1068, 1366, 1803
BssT1I CCWWGG 4 cut(s) 722, 1041, 1478, 1896
Bst2UI CCWGG 1 cut(s) 808
Bst4CI ACNGT 2 cut(s) 698, 733
Bst6I CTCTTC 4 cut(s) 477, 534, 645, 975
BstC8I GCNNGC 5 cut(s) 153, 562, 1092, 1402, 1962
BstDEI CTNAG 7 cut(s) 363, 435, 591, 1449, 1461, 1833, 1946
BstENI CCTNNNNNAGG 1 cut(s) 231
BstF5I GGATG 5 cut(s) 529, 1037, 1053, 1638, 1797
BstFNI CGCG 2 cut(s) 748, 1303
BstH2I RGCGCY 1 cut(s) 567
BstHHI GCGC 2 cut(s) 566, 748
BstKTI GATC 9 cut(s) 220, 226, 268, 331, 469, 939, 1071, 1369, 1806
BstMAI GTCTC 2 cut(s) 946, 1311
BstMBI GATC 9 cut(s) 217, 223, 265, 328, 466, 936, 1068, 1366, 1803
BstNI CCWGG 1 cut(s) 808
BstNSI RCATGY 3 cut(s) 1404, 1537, 1666
BstSCI CCNGG 1 cut(s) 806
BstSFI CTRYAG 2 cut(s) 44, 1638
BstUI CGCG 2 cut(s) 748, 1303
BstV1I GCAGC 7 cut(s) 305, 371, 431, 434, 1954, 1978, 1993
BstV2I GAAGAC 1 cut(s) 621
BstX2I RGATCY 4 cut(s) 223, 265, 328, 466
BstXI CCANNNNNNTGG 1 cut(s) 1852
BstYI RGATCY 4 cut(s) 223, 265, 328, 466
BsuRI GGCC 4 cut(s) 515, 1090, 1151, 1335
BtsCI GGATG 5 cut(s) 529, 1037, 1053, 1638, 1797
BtsI GCAGTG 1 cut(s) 1401
BtsIMutI CAGTG 4 cut(s) 703, 774, 1401, 1919
BveI ACCTGC 1 cut(s) 928
Cac8I GCNNGC 5 cut(s) 153, 562, 1092, 1402, 1962
CaiI CAGNNNCTG 1 cut(s) 962
CfoI GCGC 2 cut(s) 566, 748
Cfr10I RCCGGY 1 cut(s) 1090
Cfr13I GGNCC 2 cut(s) 1334, 1823
CseI GACGC 1 cut(s) 1973
Csp6I GTAC 2 cut(s) 68, 1876
CviAII CATG 8 cut(s) 10, 511, 1401, 1500, 1523, 1534, 1663, 1696
CviQI GTAC 2 cut(s) 68, 1876
DdeI CTNAG 7 cut(s) 363, 435, 591, 1449, 1461, 1833, 1946
DpnI GATC 9 cut(s) 219, 225, 267, 330, 468, 938, 1070, 1368, 1805
DpnII GATC 9 cut(s) 217, 223, 265, 328, 466, 936, 1068, 1366, 1803
EaeI YGGCCR 1 cut(s) 513
Eam1104I CTCTTC 4 cut(s) 477, 534, 645, 975
EarI CTCTTC 4 cut(s) 477, 534, 645, 975
Ecl136II GAGCTC 1 cut(s) 197
Eco130I CCWWGG 4 cut(s) 722, 1041, 1478, 1896
Eco24I GRGCYC 1 cut(s) 199
Eco32I GATATC 1 cut(s) 813
Eco47I GGWCC 1 cut(s) 1823
Eco47III AGCGCT 1 cut(s) 565
Eco53kI GAGCTC 1 cut(s) 197
Eco57I CTGAAG 8 cut(s) 161, 249, 290, 354, 423, 1227, 1688, 1943
EcoICRI GAGCTC 1 cut(s) 197
EcoNI CCTNNNNNAGG 1 cut(s) 231
EcoRII CCWGG 1 cut(s) 806
EcoRV GATATC 1 cut(s) 813
EcoT14I CCWWGG 4 cut(s) 722, 1041, 1478, 1896
EcoT38I GRGCYC 1 cut(s) 199
ErhI CCWWGG 4 cut(s) 722, 1041, 1478, 1896
Esp3I CGTCTC 1 cut(s) 946
FaeI CATG 8 cut(s) 13, 514, 1404, 1503, 1526, 1537, 1666, 1699
FalI AAGNNNNNCTT 2 cut(s) 1725, 1757
FaqI GGGAC 2 cut(s) 1827, 1971
FatI CATG 8 cut(s) 9, 510, 1400, 1499, 1522, 1533, 1662, 1695
FauI CCCGC 2 cut(s) 1688, 1996
FauNDI CATATG 2 cut(s) 1057, 1325
FbaI TGATCA 1 cut(s) 217
Fnu4HI GCNGC 9 cut(s) 165, 294, 360, 420, 423, 1965, 1968, 1982, 1992
FokI GGATG 5 cut(s) 536, 1024, 1060, 1645, 1784
FriOI GRGCYC 1 cut(s) 199
Fsp4HI GCNGC 9 cut(s) 165, 294, 360, 420, 423, 1965, 1968, 1982, 1992
FspBI CTAG 3 cut(s) 879, 974, 1479
GlaI GCGC 2 cut(s) 565, 747
GluI GCNGC 9 cut(s) 165, 294, 360, 420, 423, 1965, 1968, 1982, 1992
GsuI CTGGAG 2 cut(s) 1205, 1394
HaeII RGCGCY 1 cut(s) 567
HaeIII GGCC 4 cut(s) 515, 1090, 1151, 1335
HapII CCGG 1 cut(s) 1091
HgaI GACGC 1 cut(s) 1973
HhaI GCGC 2 cut(s) 566, 748
Hin1II CATG 8 cut(s) 13, 514, 1404, 1503, 1526, 1537, 1666, 1699
Hin6I GCGC 2 cut(s) 564, 746
HinP1I GCGC 2 cut(s) 564, 746
HindIII AAGCTT 5 cut(s) 153, 1361, 1718, 1739, 1943
HinfI GANTC 5 cut(s) 26, 595, 713, 798, 1457
HpaII CCGG 1 cut(s) 1091
HphI GGTGA 2 cut(s) 708, 844
Hpy188I TCNGA 7 cut(s) 270, 457, 594, 613, 1068, 1351, 1714
Hpy99I CGWCG 1 cut(s) 1585
HpyCH4III ACNGT 2 cut(s) 698, 733
HpyCH4IV ACGT 2 cut(s) 1840, 1907
HpyF3I CTNAG 7 cut(s) 363, 435, 591, 1449, 1461, 1833, 1946
HpySE526I ACGT 2 cut(s) 1840, 1907
Hsp92II CATG 8 cut(s) 13, 514, 1404, 1503, 1526, 1537, 1666, 1699
HspAI GCGC 2 cut(s) 564, 746
KroI GCCGGC 1 cut(s) 1090
KroNI GCCGGC 1 cut(s) 1092
Ksp22I TGATCA 1 cut(s) 217
Kzo9I GATC 9 cut(s) 217, 223, 265, 328, 466, 936, 1068, 1366, 1803
LguI GCTCTTC 1 cut(s) 645
LmnI GCTCC 4 cut(s) 236, 1186, 1682, 1704
Lsp1109I GCAGC 7 cut(s) 305, 371, 431, 434, 1954, 1978, 1993
LweI GCATC 3 cut(s) 382, 768, 1043
MaeI CTAG 3 cut(s) 879, 974, 1479
MaeII ACGT 2 cut(s) 1840, 1907
MaeIII GTNAC 3 cut(s) 714, 769, 832
MalI GATC 9 cut(s) 219, 225, 267, 330, 468, 938, 1070, 1368, 1805
MboI GATC 9 cut(s) 217, 223, 265, 328, 466, 936, 1068, 1366, 1803
MflI RGATCY 4 cut(s) 223, 265, 328, 466
MhlI GDGCHC 1 cut(s) 199
MluCI AATT 8 cut(s) 93, 451, 461, 607, 632, 862, 1239, 1443
MlyI GAGTC 1 cut(s) 722
MmeI TCCRAC 1 cut(s) 623
MroNI GCCGGC 1 cut(s) 1090
MroXI GAANNNNTTC 2 cut(s) 863, 1518
MseI TTAA 5 cut(s) 92, 96, 657, 969, 1128
MslI CAYNNNNRTG 1 cut(s) 1521
MspA1I CMGCKG 4 cut(s) 296, 362, 1967, 1991
MspI CCGG 1 cut(s) 1091
MspR9I CCNGG 1 cut(s) 808
MvaI CCWGG 1 cut(s) 808
MvnI CGCG 2 cut(s) 748, 1303
NaeI GCCGGC 1 cut(s) 1092
NdeI CATATG 2 cut(s) 1057, 1325
NdeII GATC 9 cut(s) 217, 223, 265, 328, 466, 936, 1068, 1366, 1803
NgoMIV GCCGGC 1 cut(s) 1090
NlaIII CATG 8 cut(s) 13, 514, 1404, 1503, 1526, 1537, 1666, 1699
NlaIV GGNNCC 5 cut(s) 225, 330, 1269, 1426, 1678
NmuCI GTSAC 3 cut(s) 714, 769, 832
NspI RCATGY 3 cut(s) 1404, 1537, 1666
PacI TTAATTAA 1 cut(s) 96
PaeI GCATGC 1 cut(s) 1404
PciSI GCTCTTC 1 cut(s) 645
PdiI GCCGGC 1 cut(s) 1092
PdmI GAANNNNTTC 2 cut(s) 863, 1518
PfeI GAWTC 4 cut(s) 26, 595, 798, 1457
PflMI CCANNNNNTGG 3 cut(s) 1343, 1500, 1770
PkrI GCNGC 9 cut(s) 166, 295, 361, 421, 424, 1966, 1969, 1983, 1993
PleI GAGTC 1 cut(s) 721
PpsI GAGTC 1 cut(s) 721
PshBI ATTAAT 1 cut(s) 969
PsiI TTATAA 1 cut(s) 1382
Psp124BI GAGCTC 1 cut(s) 199
Psp1406I AACGTT 1 cut(s) 1907
Psp6I CCWGG 1 cut(s) 806
PspGI CCWGG 1 cut(s) 806
PspN4I GGNNCC 5 cut(s) 225, 330, 1269, 1426, 1678
PspPI GGNCC 2 cut(s) 1334, 1823
PstI CTGCAG 1 cut(s) 1642
PstNI CAGNNNCTG 1 cut(s) 962
PsuI RGATCY 4 cut(s) 223, 265, 328, 466
PvuII CAGCTG 2 cut(s) 296, 362
RsaI GTAC 2 cut(s) 69, 1877
RsaNI GTAC 2 cut(s) 68, 1876
RseI CAYNNNNRTG 1 cut(s) 1521
SacI GAGCTC 1 cut(s) 199
SapI GCTCTTC 1 cut(s) 645
SaqAI TTAA 5 cut(s) 92, 96, 657, 969, 1128
SatI GCNGC 9 cut(s) 165, 294, 360, 420, 423, 1965, 1968, 1982, 1992
Sau3AI GATC 9 cut(s) 217, 223, 265, 328, 466, 936, 1068, 1366, 1803
Sau96I GGNCC 2 cut(s) 1334, 1823
SchI GAGTC 1 cut(s) 722
ScrFI CCNGG 1 cut(s) 808
SduI GDGCHC 1 cut(s) 199
SfaNI GCATC 3 cut(s) 382, 768, 1043
SfcI CTRYAG 2 cut(s) 44, 1638
SinI GGWCC 1 cut(s) 1823
SmiMI CAYNNNNRTG 1 cut(s) 1521
SmlI CTYRAG 1 cut(s) 183
SmoI CTYRAG 1 cut(s) 183
SphI GCATGC 1 cut(s) 1404
Sse9I AATT 8 cut(s) 93, 451, 461, 607, 632, 862, 1239, 1443
SsiI CCGC 8 cut(s) 164, 320, 737, 1301, 1681, 1965, 1973, 1989
SspMI CTAG 3 cut(s) 879, 974, 1479
SstI GAGCTC 1 cut(s) 199
StyD4I CCNGG 1 cut(s) 806
StyI CCWWGG 4 cut(s) 722, 1041, 1478, 1896
TaaI ACNGT 2 cut(s) 698, 733
TaiI ACGT 2 cut(s) 1843, 1910
TasI AATT 8 cut(s) 93, 451, 461, 607, 632, 862, 1239, 1443
TatI WGTACW 2 cut(s) 67, 1875
TauI GCSGC 2 cut(s) 167, 1967
TfiI GAWTC 4 cut(s) 26, 595, 798, 1457
Tru1I TTAA 5 cut(s) 92, 96, 657, 969, 1128
Tru9I TTAA 5 cut(s) 92, 96, 657, 969, 1128
TscAI CASTG 4 cut(s) 703, 774, 1401, 1926
TseFI GTSAC 3 cut(s) 714, 769, 832
TseI GCWGC 7 cut(s) 293, 359, 419, 422, 1967, 1981, 1991
Tsp45I GTSAC 3 cut(s) 714, 769, 832
TspGWI ACGGA 2 cut(s) 1329, 1760
TspRI CASTG 4 cut(s) 703, 774, 1401, 1926
Van91I CCANNNNNTGG 3 cut(s) 1343, 1500, 1770
VpaK11BI GGWCC 1 cut(s) 1823
VspI ATTAAT 1 cut(s) 969
XagI CCTNNNNNAGG 1 cut(s) 231
XapI RAATTY 4 cut(s) 451, 607, 862, 1443
XbaI TCTAGA 1 cut(s) 973
XceI RCATGY 3 cut(s) 1404, 1537, 1666
XmaJI CCTAGG 1 cut(s) 1478
XmnI GAANNNNTTC 2 cut(s) 863, 1518
XspI CTAG 3 cut(s) 879, 974, 1479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.