Rroxscaffold_3G00231830

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000274
Physical Location & Seq
Reverse (-)
17227646 .. 17234022
6377 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00231830.1

Sequence Viewer

Length: 1944 bp
ATGGGTCTCTACTCTTACGTTGTGAGATTAAAGAATAAGAAAAGAACACAGAAAAAGGACAGCATTTACTTGGTGGGGAGATGTGAAAGCAAAACGACGAAGAAAGCAAAGGAGATTGAAGAGAGATTGAAAGATGTCGAAAAGAAAGAAAAAGAAAAGGATTTGAAGGCCTCACTACAAGATGCTGAACAGTATACTTCGGGATGGAAGACAGATGGGGCACGAGTTTCAAGACAGGATTTAAAAGACATGATCATGGATGAACCGATAGCAAGCAATTGCATCGAATGTTATGGAATTCTCTTGATCGATCGACCGTTGGAGAAACAATCTCAAGACTTGGATGTCCCAACTTTTATGAATCCCTTATGCCGGATTGGATTGCGGACTTTTTGTAATGTACACAATGGAGAAAATTTCGAAAAAGAGAGAGTTCCAAAGAAGCTCACAAAGGATGATATTTTGAATTTTAGAGCTCATGTTGTCAAGTCATTTGCAGAAAGTAGGCACAGCTGGAACTCAACACATGAAGAATCAAAAAAACTGGAAGGAACTGAAGATGAAGAAGAATCAAATGAAGAACAAGTCAGCAGTAAGAAGAAGAATAAGGATAAAAAGGAGAAAACTAAAAAGGAGAAAAGAAGAAACAGGGAAGAAACCGAAGATGAAGAAGAAGTTCGTGCTAAGAAGAAGAAGAAAATGGATAAAAGGAAGACAAAAAAAGAGAGTACAAAGAAGAAGGAAGAAACCGACGAGGAAGAAGATACAAAGGATGATGAAGAGGAAAAAGTCCCAGCGAAGAGAAAAAGATATGAGTGCCGAATCCGGGTTATCGCACCAAAGACCAAAGAAGGGGCATACGTATCTGAGTTCGTGACTAAATACTTTGACAAAAAGCAGAGGATCAACAAGGCGGCTGCAGAGGAAGCTTTGAAGAAGGCATTGGCGAAACTCCGAAACAGGAGAAGAAAAACGAAACGGACGAAATGTTGCCGTATTAGTACTCTTGAACCTTTTCATCAAACTCCTGTTCCCAAACTCGGAGGAACAATATCTTGGGATTATATAAGAGTCTGTGAAGAGGTGGAAAGTCCGGGAAAATATAGCTGGGCAAAGGAAGTTGGCGACTTCCTTAAAAAATCAATTAAACGAAAGGGAAAAGATTCACAAAACATGGCAGGTTGCGTGATATTGGTGATGAAAGAATTGGAGACAAATCTTCAGAAAAAGGAAGAAGAGCTAAGAGATGTGGAAATAGAGAAAAAGGGCTTGGAAGAAAAAATAAGGAAATTGGAGAAAGGACTGGAAACAAGAGAAAAGAAAGCGGACCACATTAACAATGAGAAGATGGAGACAGAGATAGGGAAGACCAATGAAGAGAAGAATGAATTACGAGAGAAAGTGGAGGGAAAGGAAGAAGAGATAAGTGCTTTGAAAAAAGAACTTCAGGAGAAAGAAAAGGAAATTGGCAGAATAAAAGAAGAGATGGAGGATGTATTATTGGAAAATGAGGTGCTGAAAATTGAGAAAGCCTCAATGATTGAAAGAGGGAAAATTGGCGTAACGTACGAAGAGAAGGATGATGTGTTAATGGAAAATGAGGTGCTGAAAGTTGAGAGAGCCTCACCGATTAAAAGAGTGAAGCAATTGGAGGGCATAGTGATGGCACTAACCGAGAAGTACGAGTCTCCAATAGCACGTCCGGTGATGACAACTACTCAACTCCTCCTCCACCACCACCTAGTTTCCCTCCACCAAAATCAAAGGCCCCTCAAAGACAAGCCAACCGACGCAAGCACTCCAAAAACACAAAATCTCAAGCCGGAATTCAGAAACTCAATCACAACCTCGCCTACTCCACGCAAGCGCATCCGAGATGACATCGCGAACTCGACTCTACCAACCGAGGACATCGGTCACCACTTGAATGCCTTGCCCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

647

Amino Acids

75.52

Weight (kDa)

9.08

Isoelectric Point (pI)

52.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000274)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06730 FvH4_3g06731 FvH4_3g17150 FvH4_3g24490 FvH4_3g24741 FvH4_3g25201 FvH4_3g29860 FvH4_3g33300 FvH4_3g33780 FvH4_4g04830 FvH4_4g04901 FvH4_4g04910 FvH4_4g09190 FvH4_4g09870 FvH4_4g09880 FvH4_4g10501 FvH4_4g10502 FvH4_4g16800 FvH4_4g16810 FvH4_5g33260 FvH4_6g06051 FvH4_6g06060 FvH4_6g06060 FvH4_6g22011 FvH4_6g34230 FvH4_6g34231 FvH4_6g36690 FvH4_6g36710 FvH4_6g36720 FvH4_6g36740 FvH4_6g36750 FvH4_6g39110 FvH4_7g04250 FvH4_7g04250 FvH4_7g04380 FvH4_7g04390 FvH4_7g09690 FvH4_7g32810 FvH4_7g32820
pyrus_communis pycom02g10120
rosa_chinensis RchiOBHm_Chr0c39g0503121 RchiOBHm_Chr1g0327221 RchiOBHm_Chr1g0358931 RchiOBHm_Chr1g0358941 RchiOBHm_Chr3g0467921 RchiOBHm_Chr4g0402241 RchiOBHm_Chr6g0280581 RchiOBHm_Chr6g0298971 RchiOBHm_Chr7g0226761 RchiOBHm_Chr7g0226841 RchiOBHm_Chr7g0238631 RchiOBHm_Chr7g0243901
rosa_laevigata RLG00000015279 RLG00000029539
rosa_multiflora Rmu_co8451743.1_g000001 Rmu_sc0000270.1_g000001 Rmu_sc0000532.1_g000016 Rmu_sc0000885.1_g000002 Rmu_sc0001913.1_g000026 Rmu_sc0002080.1_g000032 Rmu_sc0002202.1_g000003 Rmu_sc0002202.1_g000006 Rmu_sc0005023.1_g000028 Rmu_sc0006388.1_g000017 Rmu_sc0011497.1_g000007 Rmu_sc0019088.1_g000001 Rmu_ssc0000064.1_g000017 Rmu_ssc0000170.1_g000013
rosa_roxburghii Rroxscaffold_1G00003820 Rroxscaffold_1G00015970 Rroxscaffold_1G00020360 Rroxscaffold_1G00064040 Rroxscaffold_1G00064120 Rroxscaffold_2G00086010 Rroxscaffold_2G00086020 Rroxscaffold_2G00095500 Rroxscaffold_2G00095510 Rroxscaffold_2G00102440 Rroxscaffold_2G00102970 Rroxscaffold_3G00231570 Rroxscaffold_3G00231830 Rroxscaffold_3G00250710 Rroxscaffold_3G00259420 Rroxscaffold_4G00277040 Rroxscaffold_4G00289320 Rroxscaffold_4G00289330 Rroxscaffold_4G00300150 Rroxscaffold_4G00328410 Rroxscaffold_5G00339120 Rroxscaffold_5G00349810 Rroxscaffold_5G00353990 Rroxscaffold_5G00366720 Rroxscaffold_5G00371400 Rroxscaffold_6G00411690 Rroxscaffold_6G00422190 Rroxscaffold_7G00157730 Rroxscaffold_7G00194130 Rroxscaffold_7G00196760 Rroxscaffold_7G00196770 Rroxscaffold_7G00208770
rosa_rugosa Rorug01G0230300 Rorug01G0261600 Rorug01G0360700 Rorug01G0489500 Rorug02G0176000 Rorug02G0337500 Rorug02G0570100 Rorug03G0270700 Rorug04G0114700 Rorug04G0130400 Rorug05G0073400 Rorug05G0565300 Rorug05G0565300
rosa_samantha Rh2BG158000 Rh2DG158000 Rh3AG113900 Rh3BG116900 Rh3CG119800 Rh3DG118800 Rh4BG396700 Rh5BG187400 Rh5BG211200 Rh7AG238800 Rh7AG300700 Rh7BG277000 Rh7CG068900 Rh7CG319200 Rh7CG472000 Rh7DG244600 Rh7DG475400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 344
Acc36I ACCTGC 1 cut(s) 1169
AccI GTMKAC 1 cut(s) 194
AccII CGCG 1 cut(s) 1886
AciI CCGC 3 cut(s) 385, 914, 1325
AclWI GGATC 1 cut(s) 911
AcsI RAATTY 4 cut(s) 297, 415, 466, 1826
AcuI CTGAAG 3 cut(s) 576, 1205, 1430
AfaI GTAC 5 cut(s) 402, 730, 1003, 1568, 1682
AfiI CCNNNNNNNGG 4 cut(s) 372, 826, 852, 1040
AjiI CACGTC 1 cut(s) 1700
AjuI GAANNNNNNNTTGG 8 cut(s) 926, 958, 1039, 1071, 1253, 1285, 1449, 1481
AluBI AGCT 6 cut(s) 445, 476, 513, 929, 1107, 1240
AluI AGCT 6 cut(s) 445, 476, 513, 929, 1107, 1240
Alw21I GWGCWC 1 cut(s) 478
Alw26I GTCTC 4 cut(s) 11, 1205, 1346, 1692
AlwI GGATC 1 cut(s) 911
AoxI GGCC 2 cut(s) 168, 1766
ApeKI GCWGC 1 cut(s) 917
ApoI RAATTY 4 cut(s) 297, 415, 466, 1826
Asp700I GAANNNNTTC 3 cut(s) 675, 1014, 1162
AspLEI GCGC 1 cut(s) 1869
AspS9I GGNCC 2 cut(s) 1327, 1767
AsuC2I CCSGG 2 cut(s) 827, 1095
AsuHPI GGTGA 4 cut(s) 1207, 1617, 1717, 1910
AsuII TTCGAA 1 cut(s) 420
AvaII GGWCC 1 cut(s) 1327
BaeGI GKGCMC 1 cut(s) 223
BanII GRGCYC 1 cut(s) 478
BauI CACGAG 1 cut(s) 222
BbsI GAAGAC 3 cut(s) 215, 719, 1373
Bbv12I GWGCWC 1 cut(s) 478
BbvI GCAGC 1 cut(s) 904
BccI CCATC 5 cut(s) 198, 209, 1342, 1480, 1657
BceAI ACGGC 1 cut(s) 978
BcgI CGANNNNNNTGC 2 cut(s) 265, 299
BclI TGATCA 1 cut(s) 252
BcnI CCSGG 2 cut(s) 827, 1095
BcoDI GTCTC 4 cut(s) 11, 1205, 1346, 1692
BfaI CTAG 1 cut(s) 1742
BfmI CTRYAG 1 cut(s) 918
BfuAI ACCTGC 1 cut(s) 1169
BisI GCNGC 2 cut(s) 915, 918
BlsI GCNGC 2 cut(s) 916, 919
BmcAI AGTACT 1 cut(s) 1003
Bme1390I CCNGG 2 cut(s) 827, 1095
Bme18I GGWCC 1 cut(s) 1327
BmgBI CACGTC 1 cut(s) 1700
BmgT120I GGNCC 2 cut(s) 1327, 1767
BmiI GGNNCC 1 cut(s) 1769
BmrFI CCNGG 2 cut(s) 827, 1095
BmsI GCATC 3 cut(s) 172, 291, 1878
BoxI GACNNNNGTC 1 cut(s) 1914
BpiI GAAGAC 3 cut(s) 215, 719, 1373
BplI GAGNNNNNCTC 4 cut(s) 1517, 1549, 1607, 1639
Bpu14I TTCGAA 1 cut(s) 420
BpuEI CTTGAG 2 cut(s) 318, 1802
BpuMI CCSGG 2 cut(s) 827, 1095
Bsa29I ATCGAT 1 cut(s) 309
BsaAI YACGTR 1 cut(s) 862
BsaI GGTCTC 1 cut(s) 11
BsaJI CCNNGG 1 cut(s) 1905
BsaWI WCCGGW 1 cut(s) 1702
BsaXI ACNNNNNCTCC 2 cut(s) 1713, 1743
Bsc4I CCNNNNNNNGG 4 cut(s) 372, 826, 852, 1040
Bse1I ACTGG 2 cut(s) 549, 1308
BseCI ATCGAT 1 cut(s) 309
BseDI CCNNGG 1 cut(s) 1905
BseGI GGATG 8 cut(s) 209, 265, 349, 460, 778, 1498, 1585, 1869
BseLI CCNNNNNNNGG 4 cut(s) 372, 826, 852, 1040
BseMII CTCAG 1 cut(s) 858
BseNI ACTGG 2 cut(s) 549, 1308
BseRI GAGGAG 2 cut(s) 1715, 1718
BseSI GKGCMC 1 cut(s) 223
BseXI GCAGC 1 cut(s) 904
BseYI CCCAGC 2 cut(s) 793, 1107
Bsh1236I CGCG 1 cut(s) 1886
Bsh1285I CGRYCG 2 cut(s) 313, 317
BshFI GGCC 2 cut(s) 170, 1768
BshVI ATCGAT 1 cut(s) 309
BsiEI CGRYCG 2 cut(s) 313, 317
BsiHKAI GWGCWC 1 cut(s) 478
BsiSI CCGG 5 cut(s) 373, 826, 1094, 1703, 1823
BsiWI CGTACG 1 cut(s) 1566
BslFI GGGAC 2 cut(s) 332, 776
BslI CCNNNNNNNGG 4 cut(s) 372, 826, 852, 1040
BsmAI GTCTC 4 cut(s) 11, 1205, 1346, 1692
BsmFI GGGAC 2 cut(s) 332, 776
BsmI GAATGC 1 cut(s) 1933
BsnI GGCC 2 cut(s) 170, 1768
Bso31I GGTCTC 1 cut(s) 11
Bsp119I TTCGAA 1 cut(s) 420
Bsp1286I GDGCHC 2 cut(s) 223, 478
Bsp1407I TGTACA 1 cut(s) 400
Bsp143I GATC 4 cut(s) 252, 306, 310, 903
Bsp68I TCGCGA 1 cut(s) 1886
BspACI CCGC 3 cut(s) 385, 914, 1325
BspANI GGCC 2 cut(s) 170, 1768
BspCNI CTCAG 1 cut(s) 859
BspDI ATCGAT 1 cut(s) 309
BspFNI CGCG 1 cut(s) 1886
BspLI GGNNCC 1 cut(s) 1769
BspMAI CTGCAG 1 cut(s) 922
BspMI ACCTGC 1 cut(s) 1169
BspPI GGATC 1 cut(s) 911
BspQI GCTCTTC 1 cut(s) 1230
BspT104I TTCGAA 1 cut(s) 420
BspTNI GGTCTC 1 cut(s) 11
BsrGI TGTACA 1 cut(s) 400
BsrI ACTGG 2 cut(s) 549, 1308
BssECI CCNNGG 1 cut(s) 1905
BssMI GATC 4 cut(s) 252, 306, 310, 903
BssNAI GTATAC 1 cut(s) 195
BssSI CACGAG 1 cut(s) 222
Bst1107I GTATAC 1 cut(s) 195
Bst2BI CACGAG 1 cut(s) 222
Bst4CI ACNGT 2 cut(s) 192, 318
Bst6I CTCTTC 9 cut(s) 114, 774, 794, 1074, 1230, 1371, 1413, 1476, 1566
BstAUI TGTACA 1 cut(s) 400
BstBAI YACGTR 1 cut(s) 862
BstBI TTCGAA 1 cut(s) 420
BstC8I GCNNGC 3 cut(s) 274, 1795, 1865
BstDEI CTNAG 3 cut(s) 684, 867, 1241
BstEII GGTNACC 1 cut(s) 1916
BstF5I GGATG 8 cut(s) 209, 265, 349, 460, 778, 1498, 1585, 1869
BstFNI CGCG 1 cut(s) 1886
BstHHI GCGC 1 cut(s) 1869
BstKTI GATC 4 cut(s) 255, 309, 313, 906
BstMAI GTCTC 4 cut(s) 11, 1205, 1346, 1692
BstMBI GATC 4 cut(s) 252, 306, 310, 903
BstMCI CGRYCG 2 cut(s) 313, 317
BstMWI GCNNNNNNNGC 1 cut(s) 926
BstPAI GACNNNNGTC 1 cut(s) 1914
BstPI GGTNACC 1 cut(s) 1916
BstSCI CCNGG 2 cut(s) 825, 1093
BstSFI CTRYAG 1 cut(s) 918
BstSLI GKGCMC 1 cut(s) 223
BstSNI TACGTA 1 cut(s) 862
BstUI CGCG 1 cut(s) 1886
BstV1I GCAGC 1 cut(s) 904
BstV2I GAAGAC 3 cut(s) 215, 719, 1373
BstZ17I GTATAC 1 cut(s) 195
Bsu15I ATCGAT 1 cut(s) 309
BsuRI GGCC 2 cut(s) 170, 1768
BsuTUI ATCGAT 1 cut(s) 309
BtgZI GCGATG 1 cut(s) 1867
BtrI CACGTC 1 cut(s) 1700
BtsCI GGATG 8 cut(s) 209, 265, 349, 460, 778, 1498, 1585, 1869
BtuMI TCGCGA 1 cut(s) 1886
BveI ACCTGC 1 cut(s) 1169
Cac8I GCNNGC 3 cut(s) 274, 1795, 1865
CfoI GCGC 1 cut(s) 1869
Cfr13I GGNCC 2 cut(s) 1327, 1767
ClaI ATCGAT 1 cut(s) 309
CseI GACGC 1 cut(s) 1799
Csp6I GTAC 5 cut(s) 401, 729, 1002, 1567, 1681
CviAII CATG 5 cut(s) 250, 256, 479, 527, 1174
CviQI GTAC 5 cut(s) 401, 729, 1002, 1567, 1681
DdeI CTNAG 3 cut(s) 684, 867, 1241
DpnI GATC 4 cut(s) 254, 308, 312, 905
DpnII GATC 4 cut(s) 252, 306, 310, 903
DraI TTTAAA 1 cut(s) 243
DrdI GACNNNNNNGTC 1 cut(s) 344
DseDI GACNNNNNNGTC 1 cut(s) 344
Eam1104I CTCTTC 9 cut(s) 114, 774, 794, 1074, 1230, 1371, 1413, 1476, 1566
EarI CTCTTC 9 cut(s) 114, 774, 794, 1074, 1230, 1371, 1413, 1476, 1566
Ecl136II GAGCTC 1 cut(s) 476
Eco105I TACGTA 1 cut(s) 862
Eco147I AGGCCT 1 cut(s) 170
Eco24I GRGCYC 1 cut(s) 478
Eco31I GGTCTC 1 cut(s) 11
Eco47I GGWCC 1 cut(s) 1327
Eco53kI GAGCTC 1 cut(s) 476
Eco57I CTGAAG 3 cut(s) 576, 1205, 1430
Eco91I GGTNACC 1 cut(s) 1916
EcoICRI GAGCTC 1 cut(s) 476
EcoO109I RGGNCCY 1 cut(s) 1767
EcoO65I GGTNACC 1 cut(s) 1916
EcoRI GAATTC 2 cut(s) 297, 1826
EcoT38I GRGCYC 1 cut(s) 478
FaeI CATG 5 cut(s) 253, 259, 482, 530, 1177
FaqI GGGAC 2 cut(s) 332, 776
FatI CATG 5 cut(s) 249, 255, 478, 526, 1173
FbaI TGATCA 1 cut(s) 252
FblI GTMKAC 1 cut(s) 194
Fnu4HI GCNGC 2 cut(s) 915, 918
FokI GGATG 8 cut(s) 216, 272, 356, 467, 785, 1505, 1592, 1856
FriOI GRGCYC 1 cut(s) 478
Fsp4HI GCNGC 2 cut(s) 915, 918
FspBI CTAG 1 cut(s) 1742
GlaI GCGC 1 cut(s) 1868
GluI GCNGC 2 cut(s) 915, 918
GsaI CCCAGC 2 cut(s) 797, 1111
HaeIII GGCC 2 cut(s) 170, 1768
HapII CCGG 5 cut(s) 373, 826, 1094, 1703, 1823
HgaI GACGC 1 cut(s) 1799
HhaI GCGC 1 cut(s) 1869
Hin1II CATG 5 cut(s) 253, 259, 482, 530, 1177
Hin6I GCGC 1 cut(s) 1867
HinP1I GCGC 1 cut(s) 1867
HindIII AAGCTT 1 cut(s) 927
HinfI GANTC 8 cut(s) 361, 533, 569, 822, 1071, 1163, 1685, 1894
HpaII CCGG 5 cut(s) 373, 826, 1094, 1703, 1823
HphI GGTGA 4 cut(s) 1207, 1617, 1717, 1910
Hpy166II GTNNAC 2 cut(s) 195, 403
Hpy188I TCNGA 6 cut(s) 868, 956, 1043, 1224, 1832, 1874
Hpy188III TCNNGA 8 cut(s) 201, 231, 304, 335, 874, 1007, 1448, 1885
Hpy8I GTNNAC 2 cut(s) 195, 403
Hpy99I CGWCG 3 cut(s) 100, 755, 1793
HpyAV CCTTC 6 cut(s) 160, 542, 733, 845, 931, 1570
HpyCH4III ACNGT 2 cut(s) 192, 318
HpyCH4IV ACGT 4 cut(s) 18, 861, 1565, 1699
HpyCH4V TGCA 3 cut(s) 282, 497, 920
HpyF10VI GCNNNNNNNGC 1 cut(s) 926
HpyF3I CTNAG 3 cut(s) 684, 867, 1241
HpySE526I ACGT 4 cut(s) 18, 861, 1565, 1699
Hsp92II CATG 5 cut(s) 253, 259, 482, 530, 1177
HspAI GCGC 1 cut(s) 1867
Ksp22I TGATCA 1 cut(s) 252
Kzo9I GATC 4 cut(s) 252, 306, 310, 903
LguI GCTCTTC 1 cut(s) 1230
Lsp1109I GCAGC 1 cut(s) 904
LweI GCATC 3 cut(s) 172, 291, 1878
MaeI CTAG 1 cut(s) 1742
MaeII ACGT 4 cut(s) 18, 861, 1565, 1699
MaeIII GTNAC 3 cut(s) 874, 1561, 1916
MalI GATC 4 cut(s) 254, 308, 312, 905
MboI GATC 4 cut(s) 252, 306, 310, 903
MfeI CAATTG 2 cut(s) 277, 1646
MhlI GDGCHC 2 cut(s) 223, 478
MlyI GAGTC 3 cut(s) 1080, 1694, 1888
MmeI TCCRAC 1 cut(s) 300
MroXI GAANNNNTTC 3 cut(s) 675, 1014, 1162
MseI TTAA 7 cut(s) 29, 242, 1134, 1146, 1335, 1589, 1632
MslI CAYNNNNRTG 3 cut(s) 254, 1661, 1926
MspA1I CMGCKG 1 cut(s) 513
MspI CCGG 5 cut(s) 373, 826, 1094, 1703, 1823
MspR9I CCNGG 2 cut(s) 827, 1095
MunI CAATTG 2 cut(s) 277, 1646
Mva1269I GAATGC 1 cut(s) 1933
MvnI CGCG 1 cut(s) 1886
MwoI GCNNNNNNNGC 1 cut(s) 926
NciI CCSGG 2 cut(s) 827, 1095
NdeII GATC 4 cut(s) 252, 306, 310, 903
NlaIII CATG 5 cut(s) 253, 259, 482, 530, 1177
NlaIV GGNNCC 1 cut(s) 1769
NmuCI GTSAC 2 cut(s) 874, 1916
NruI TCGCGA 1 cut(s) 1886
NspV TTCGAA 1 cut(s) 420
PceI AGGCCT 1 cut(s) 170
PciSI GCTCTTC 1 cut(s) 1230
PcsI WCGNNNNNNNCGW 1 cut(s) 980
PctI GAATGC 1 cut(s) 1933
PdmI GAANNNNTTC 3 cut(s) 675, 1014, 1162
PfeI GAWTC 5 cut(s) 361, 533, 569, 822, 1163
Pfl23II CGTACG 1 cut(s) 1566
PfoI TCCNGGA 1 cut(s) 1093
PkrI GCNGC 2 cut(s) 916, 919
Ple19I CGATCG 1 cut(s) 313
PleI GAGTC 3 cut(s) 1079, 1693, 1888
PpsI GAGTC 3 cut(s) 1079, 1693, 1888
Ppu21I YACGTR 1 cut(s) 862
PshAI GACNNNNGTC 1 cut(s) 1914
Psp124BI GAGCTC 1 cut(s) 478
PspEI GGTNACC 1 cut(s) 1916
PspFI CCCAGC 2 cut(s) 793, 1107
PspLI CGTACG 1 cut(s) 1566
PspN4I GGNNCC 1 cut(s) 1769
PspPI GGNCC 2 cut(s) 1327, 1767
PstI CTGCAG 1 cut(s) 922
PvuI CGATCG 1 cut(s) 313
PvuII CAGCTG 1 cut(s) 513
RruI TCGCGA 1 cut(s) 1886
RsaI GTAC 5 cut(s) 402, 730, 1003, 1568, 1682
RsaNI GTAC 5 cut(s) 401, 729, 1002, 1567, 1681
RseI CAYNNNNRTG 3 cut(s) 254, 1661, 1926
SacI GAGCTC 1 cut(s) 478
SapI GCTCTTC 1 cut(s) 1230
SaqAI TTAA 7 cut(s) 29, 242, 1134, 1146, 1335, 1589, 1632
SatI GCNGC 2 cut(s) 915, 918
Sau3AI GATC 4 cut(s) 252, 306, 310, 903
Sau96I GGNCC 2 cut(s) 1327, 1767
ScaI AGTACT 1 cut(s) 1003
SchI GAGTC 3 cut(s) 1080, 1694, 1888
ScrFI CCNGG 2 cut(s) 827, 1095
SduI GDGCHC 2 cut(s) 223, 478
SfaNI GCATC 3 cut(s) 172, 291, 1878
SfcI CTRYAG 1 cut(s) 918
SfuI TTCGAA 1 cut(s) 420
SinI GGWCC 1 cut(s) 1327
SmiMI CAYNNNNRTG 3 cut(s) 254, 1661, 1926
SmlI CTYRAG 2 cut(s) 333, 1817
SmoI CTYRAG 2 cut(s) 333, 1817
SnaBI TACGTA 1 cut(s) 862
SseBI AGGCCT 1 cut(s) 170
SsiI CCGC 3 cut(s) 385, 914, 1325
SspMI CTAG 1 cut(s) 1742
SstI GAGCTC 1 cut(s) 478
StuI AGGCCT 1 cut(s) 170
StyD4I CCNGG 2 cut(s) 825, 1093
TaaI ACNGT 2 cut(s) 192, 318
TaiI ACGT 4 cut(s) 21, 864, 1568, 1702
TaqI TCGA 6 cut(s) 138, 285, 309, 313, 420, 1892
TaqII GACCGA 1 cut(s) 1904
TatI WGTACW 3 cut(s) 400, 728, 1001
TauI GCSGC 1 cut(s) 917
TfiI GAWTC 5 cut(s) 361, 533, 569, 822, 1163
Tru1I TTAA 7 cut(s) 29, 242, 1134, 1146, 1335, 1589, 1632
Tru9I TTAA 7 cut(s) 29, 242, 1134, 1146, 1335, 1589, 1632
TseFI GTSAC 2 cut(s) 874, 1916
TseI GCWGC 1 cut(s) 917
Tsp45I GTSAC 2 cut(s) 874, 1916
TspGWI ACGGA 1 cut(s) 994
VpaK11BI GGWCC 1 cut(s) 1327
XapI RAATTY 4 cut(s) 297, 415, 466, 1826
XmiI GTMKAC 1 cut(s) 194
XmnI GAANNNNTTC 3 cut(s) 675, 1014, 1162
XspI CTAG 1 cut(s) 1742
ZrmI AGTACT 1 cut(s) 1003
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.