FvH4_4g09880

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000274
Physical Location & Seq
Reverse (-)
12196736 .. 12200410
3675 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g09880.t1

Sequence Viewer

Length: 2592 bp
ATGAACGCATTTAATGAAGAAGGAAAGAAGAGAAAGAGGATAGTTGATGAAGGAGCAAAGAAGAGAAAGAGGACAGTGGATGAAGAGGCTGATGGTGTACTGCTGTCCAAACTATTTCTGGGACAGGAAAAAAGAAGGAGAAAAGAAGAGAAGAAAAATAAGATAGAGGAGCCAAAGAAGAAGAAGGCCTTGAAGAAGACATCTCAAATAGAGGAGGAGGAAGAAGAAGAAGATGAGACAGAGAAGAAGAAATCAAATCAGTTCAGATCAACATGGCCTGAAGTGGACAGTTTTAGAGAAGTATTAGATGAAGAAGCACTGAATGAGCTGAGAAATGGCCCGTTTGGTTTACTTTTTGAAGGATTTTATGAGCATGTCAACAAAAAGCACTTTGGGAAGTCGAACAAGCTCATTGAAACAATCGCCGACACTTACAATGAAAAGCTTGATGCATTTGTGATCGGGGAAGGAAGATACAGAATCACAAGCAGAGATGTATCTGAGATTCTAGGACTTCCTAGAAAAGGTGGCTTCTTTGAGACAATGGAAGTGGAAGAGAATGCAGCAGAGACATTGTTTGGGAAAAACAAAAGAGTGACAAAAAAGTGTGTGATGGACGCTTTAAGAGAGCTCAAGGACCAGCAGCCAACAAATGATGAAGAAAGAAGAAAGAAGAGAAAAAATTTGGTTAGGCTGCTCATTTTAGAAATTTGCATAAAGTTTCTATTTGCAAATGGGGGAGGGAGTGTCTCAAATGAGCTGGTAAATGCAGTATGGGGGAACATACAGAGCTGTGGATGGGCTCAAGAGGTTAGAAGATTTTTGTCGGGTTGTTTAAGACAACGACTAAAATCAAAGGGTAAGGGGTTGAGCGGGTTGAACACAGGAGGCTGTGCACACTTAATTCTGTATTGGCTCTGTGAGAAGACAAACGCCATAAAGCCGATTGAAGGCACAGAGGATGAGGAACATAAGATGAGGAAATGGGACCTCACAAAGCTACCCAAGAATGCTGAATTCAAAACATTGAAGCAACTGTTCGCTGGAATCAAGTCTGATCCAGAAGAAACAGATTGTGAATCTGAAGCAGAAGAAGAAGAAACAGTGCAGAAGAAACTGATGGATAAAGAAGAAACATGGCAGGCAGCAGAGGAAGGAGAAAGGCCACCGTCCTCGTTAATATCCGGTCAAAGCCAAAAAGCAAAGGAGGTTGAAATGAGACGGCTAACAGAGGAGAACGAAAGGCTGCGCTGTCAAACTGAAAGCTTGAAAGAGGAAATGAGAAACATGGCAGAGGACTATGAATCAAGGCAGACAGAACTACAGGAGAAGATGGAAAATGCAGTACAGGATTTGATGATTGAGAGGTTAATTAACAATGAAACAAGGTTGCAGAATGAAAAACTCAATGAAGAACTAAAGAAGTTGCAAGCTTTGGTGGCGGCATTAGCACCAAACTCTCAAGATGAGAGAGCTCTGGAAAGCAATGAAGATGATCAGGATCCTGATGGAGGAGCAAACGAGGGAGGAAAAAACAATGAAGATCTGAAGGACAAGGAAGCTGATAAGGCAGCTGAAAAAGATGATGATAAGGAAGCGGATAAGGATCCTGAAGGAACTCGCAAGGAAGATGAAGCAGCTGAGAAAATGGAGGAGGAGGAGGAGAAAGATGCCAATGCTGAAGATAAGAGTGAGGCAGCAGCGAACATAGCTCAGCTTTCAATGCAAAATTCGGAAGAATTAGATCTTCAAGCATTAGAAGAGATTCCAACCCAAAATTCAGAAGACTTATATGTTGAAGAATTAGAACGGGTTGAGGAAGAGCTTAAAAAGAAGAAGAAAGCAGACGATGAAACGAAGGCTTACAGTGAGCAACCACCAGAGTCACCACCAAGGAGGACGGTTGCGGAAGAAGCGCGTTGGTCGCCGAAAACACCGGTGACAGAGATGCCTTCTTTTGATTTGGGAATCTCTCCCTGGGTATCTTGGAATAGCCCATTGGTGACTGGAATAATAACCATACCAGAGAAGAATTTCAATACTCCCTCTAGCCCTCAAATCATTGACCTTACGATGATGGAACGAGAACCTGCAAAATACCAGATGATCGTATCTCCACAGGTAGCAGTTCCTGTCATTAATCTAGATGAAGAGGAGAGTGATATTGAGATTGAGCTGACAGAGGAAAACTCTGGAAGGACAGCATCATCCTTGGGGATGTATTCATATGTTGCTCGGATCAAGAACAAGCAGAGAAGGCCGGCTAAAAGAGATGATATATACTGGTGGGGGGAGGTTAAAAACACCAGAGAGAAGAAGGCCAGAGAAATAGCAGAAGAAAGGAAGAAAAATCTGGAGCAGAAGAACAAGATAGCTGAAGGAGAAGAACTGAACGAGTATGGACATGTAATTCATACTATTGGTGCTGATGAAATGAAACCAATGCCAATACAGATTGTGCCAACCACCGCGAGAGCAATACGGGTTATGACTCAGAAGGCGGTTTGGACAACTTCCAAAGCATTCAAGTGCATGGATCCATTGACAAAGAAAAAATGGACAACTTGCTGGGAAAGCTTAGATGACGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

864

Amino Acids

99.16

Weight (kDa)

5.02

Isoelectric Point (pI)

59.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000274)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06730 FvH4_3g06731 FvH4_3g17150 FvH4_3g24490 FvH4_3g24741 FvH4_3g25201 FvH4_3g29860 FvH4_3g33300 FvH4_3g33780 FvH4_4g04830 FvH4_4g04901 FvH4_4g04910 FvH4_4g09190 FvH4_4g09870 FvH4_4g09880 FvH4_4g10501 FvH4_4g10502 FvH4_4g16800 FvH4_4g16810 FvH4_5g33260 FvH4_6g06051 FvH4_6g06060 FvH4_6g06060 FvH4_6g22011 FvH4_6g34230 FvH4_6g34231 FvH4_6g36690 FvH4_6g36710 FvH4_6g36720 FvH4_6g36740 FvH4_6g36750 FvH4_6g39110 FvH4_7g04250 FvH4_7g04250 FvH4_7g04380 FvH4_7g04390 FvH4_7g09690 FvH4_7g32810 FvH4_7g32820
pyrus_communis pycom02g10120
rosa_chinensis RchiOBHm_Chr0c39g0503121 RchiOBHm_Chr1g0327221 RchiOBHm_Chr1g0358931 RchiOBHm_Chr1g0358941 RchiOBHm_Chr3g0467921 RchiOBHm_Chr4g0402241 RchiOBHm_Chr6g0280581 RchiOBHm_Chr6g0298971 RchiOBHm_Chr7g0226761 RchiOBHm_Chr7g0226841 RchiOBHm_Chr7g0238631 RchiOBHm_Chr7g0243901
rosa_laevigata RLG00000015279 RLG00000029539
rosa_multiflora Rmu_co8451743.1_g000001 Rmu_sc0000270.1_g000001 Rmu_sc0000532.1_g000016 Rmu_sc0000885.1_g000002 Rmu_sc0001913.1_g000026 Rmu_sc0002080.1_g000032 Rmu_sc0002202.1_g000003 Rmu_sc0002202.1_g000006 Rmu_sc0005023.1_g000028 Rmu_sc0006388.1_g000017 Rmu_sc0011497.1_g000007 Rmu_sc0019088.1_g000001 Rmu_ssc0000064.1_g000017 Rmu_ssc0000170.1_g000013
rosa_roxburghii Rroxscaffold_1G00003820 Rroxscaffold_1G00015970 Rroxscaffold_1G00020360 Rroxscaffold_1G00064040 Rroxscaffold_1G00064120 Rroxscaffold_2G00086010 Rroxscaffold_2G00086020 Rroxscaffold_2G00095500 Rroxscaffold_2G00095510 Rroxscaffold_2G00102440 Rroxscaffold_2G00102970 Rroxscaffold_3G00231570 Rroxscaffold_3G00231830 Rroxscaffold_3G00250710 Rroxscaffold_3G00259420 Rroxscaffold_4G00277040 Rroxscaffold_4G00289320 Rroxscaffold_4G00289330 Rroxscaffold_4G00300150 Rroxscaffold_4G00328410 Rroxscaffold_5G00339120 Rroxscaffold_5G00349810 Rroxscaffold_5G00353990 Rroxscaffold_5G00366720 Rroxscaffold_5G00371400 Rroxscaffold_6G00411690 Rroxscaffold_6G00422190 Rroxscaffold_7G00157730 Rroxscaffold_7G00194130 Rroxscaffold_7G00196760 Rroxscaffold_7G00196770 Rroxscaffold_7G00208770
rosa_rugosa Rorug01G0230300 Rorug01G0261600 Rorug01G0360700 Rorug01G0489500 Rorug02G0176000 Rorug02G0337500 Rorug02G0570100 Rorug03G0270700 Rorug04G0114700 Rorug04G0130400 Rorug05G0073400 Rorug05G0565300 Rorug05G0565300
rosa_samantha Rh2BG158000 Rh2DG158000 Rh3AG113900 Rh3BG116900 Rh3CG119800 Rh3DG118800 Rh4BG396700 Rh5BG187400 Rh5BG211200 Rh7AG238800 Rh7AG300700 Rh7BG277000 Rh7CG068900 Rh7CG319200 Rh7CG472000 Rh7DG244600 Rh7DG475400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2098
AccBSI CCGCTC 1 cut(s) 873
AccII CGCG 2 cut(s) 1918, 2471
AciI CCGC 6 cut(s) 873, 1442, 1598, 1907, 2469, 2501
AclWI GGATC 8 cut(s) 1052, 1496, 1509, 1601, 1614, 2246, 2531, 2544
AcsI RAATTY 6 cut(s) 682, 708, 1016, 1729, 1777, 2032
AcuI CTGAAG 6 cut(s) 300, 1104, 1568, 1632, 1701, 2397
AfaI GTAC 2 cut(s) 99, 1347
AfiI CCNNNNNNNGG 3 cut(s) 524, 950, 1511
AflIII ACRYGT 1 cut(s) 2404
AgeI ACCGGT 1 cut(s) 1936
AjnI CCWGG 1 cut(s) 1976
AjuI GAANNNNNNNTTGG 4 cut(s) 1762, 1794, 1982, 2014
Alw21I GWGCWC 3 cut(s) 633, 898, 1477
Alw26I GTCTC 5 cut(s) 230, 533, 563, 754, 1213
Alw44I GTGCAC 1 cut(s) 894
AlwI GGATC 8 cut(s) 1052, 1496, 1509, 1601, 1614, 2246, 2531, 2544
AlwNI CAGNNNCTG 1 cut(s) 2132
AoxI GGCC 6 cut(s) 186, 275, 337, 1163, 2258, 2319
ApaLI GTGCAC 1 cut(s) 894
ApeKI GCWGC 9 cut(s) 563, 643, 694, 1145, 1246, 1571, 1637, 1697, 1700
ApoI RAATTY 6 cut(s) 682, 708, 1016, 1729, 1777, 2032
AseI ATTAAT 1 cut(s) 2139
AsiGI ACCGGT 1 cut(s) 1936
Asp700I GAANNNNTTC 2 cut(s) 1764, 2033
AspLEI GCGC 2 cut(s) 1251, 1918
AspS9I GGNCC 3 cut(s) 338, 637, 988
AsuHPI GGTGA 3 cut(s) 1878, 1951, 2014
AvaII GGWCC 2 cut(s) 637, 988
BaeGI GKGCMC 1 cut(s) 898
BamHI GGATCC 3 cut(s) 1501, 1606, 2536
BanII GRGCYC 3 cut(s) 633, 805, 1477
BbsI GAAGAC 3 cut(s) 203, 932, 1791
Bbv12I GWGCWC 3 cut(s) 633, 898, 1477
BbvI GCAGC 9 cut(s) 575, 655, 681, 1157, 1233, 1583, 1649, 1709, 1712
BccI CCATC 7 cut(s) 86, 607, 792, 1114, 1327, 1502, 2071
BceAI ACGGC 1 cut(s) 1238
BciT130I CCWGG 1 cut(s) 1978
BclI TGATCA 1 cut(s) 1495
BcoDI GTCTC 5 cut(s) 230, 533, 563, 754, 1213
BfaI CTAG 4 cut(s) 509, 519, 2049, 2144
BfmI CTRYAG 1 cut(s) 1322
BfuAI ACCTGC 1 cut(s) 2098
BglII AGATCT 2 cut(s) 1543, 1744
BlpI GCTNAGC 1 cut(s) 1713
Bme1390I CCNGG 1 cut(s) 1978
Bme18I GGWCC 2 cut(s) 637, 988
BmgT120I GGNCC 3 cut(s) 338, 637, 988
BmiI GGNNCC 5 cut(s) 171, 989, 1503, 1608, 2538
BmrFI CCNGG 1 cut(s) 1978
BmsI GCATC 4 cut(s) 439, 1660, 1938, 2213
BpiI GAAGAC 3 cut(s) 203, 932, 1791
BplI GAGNNNNNCTC 2 cut(s) 2174, 2206
BpmI CTGGAG 1 cut(s) 2375
Bpu1102I GCTNAGC 1 cut(s) 1713
BpuEI CTTGAG 3 cut(s) 617, 789, 1446
BsaBI GATNNNNATC 2 cut(s) 1500, 1605
BsaJI CCNNGG 4 cut(s) 1892, 1976, 1977, 2211
BsaWI WCCGGW 2 cut(s) 1184, 1936
BsaXI ACNNNNNCTCC 2 cut(s) 732, 762
Bsc4I CCNNNNNNNGG 3 cut(s) 524, 950, 1511
Bse118I RCCGGY 2 cut(s) 1936, 2260
Bse1I ACTGG 2 cut(s) 2011, 2288
Bse3DI GCAATG 1 cut(s) 1492
Bse8I GATNNNNATC 2 cut(s) 1500, 1605
BseBI CCWGG 1 cut(s) 1978
BseDI CCNNGG 4 cut(s) 1892, 1976, 1977, 2211
BseGI GGATG 5 cut(s) 85, 803, 967, 2207, 2223
BseJI GATNNNNATC 2 cut(s) 1500, 1605
BseLI CCNNNNNNNGG 3 cut(s) 524, 950, 1511
BseMI GCAATG 1 cut(s) 1492
BseMII CTCAG 5 cut(s) 320, 492, 1632, 1727, 2507
BseNI ACTGG 2 cut(s) 2011, 2288
BseSI GKGCMC 1 cut(s) 898
BseXI GCAGC 9 cut(s) 575, 655, 681, 1157, 1233, 1583, 1649, 1709, 1712
BseYI CCCAGC 1 cut(s) 2568
BsgI GTGCAG 1 cut(s) 1127
Bsh1236I CGCG 2 cut(s) 1918, 2471
BshFI GGCC 6 cut(s) 188, 277, 339, 1165, 2260, 2321
BshTI ACCGGT 1 cut(s) 1936
BsiHKAI GWGCWC 3 cut(s) 633, 898, 1477
BsiSI CCGG 3 cut(s) 1185, 1937, 2261
BslFI GGGAC 2 cut(s) 135, 1001
BslI CCNNNNNNNGG 3 cut(s) 524, 950, 1511
BsmAI GTCTC 5 cut(s) 230, 533, 563, 754, 1213
BsmBI CGTCTC 1 cut(s) 1213
BsmFI GGGAC 2 cut(s) 135, 1001
BsmI GAATGC 3 cut(s) 565, 1015, 2522
BsnI GGCC 6 cut(s) 188, 277, 339, 1165, 2260, 2321
Bsp1286I GDGCHC 4 cut(s) 633, 805, 898, 1477
Bsp1720I GCTNAGC 1 cut(s) 1713
BspACI CCGC 6 cut(s) 873, 1442, 1598, 1907, 2469, 2501
BspANI GGCC 6 cut(s) 188, 277, 339, 1165, 2260, 2321
BspCNI CTCAG 5 cut(s) 321, 493, 1633, 1726, 2506
BspFNI CGCG 2 cut(s) 1918, 2471
BspLI GGNNCC 5 cut(s) 171, 989, 1503, 1608, 2538
BspMI ACCTGC 1 cut(s) 2098
BspPI GGATC 8 cut(s) 1052, 1496, 1509, 1601, 1614, 2246, 2531, 2544
BspQI GCTCTTC 1 cut(s) 1815
BsrBI CCGCTC 1 cut(s) 873
BsrDI GCAATG 1 cut(s) 1492
BsrFI RCCGGY 2 cut(s) 1936, 2260
BsrI ACTGG 2 cut(s) 2011, 2288
BssAI RCCGGY 2 cut(s) 1936, 2260
BssECI CCNNGG 4 cut(s) 1892, 1976, 1977, 2211
BssT1I CCWWGG 2 cut(s) 1892, 2211
Bst2UI CCWGG 1 cut(s) 1978
Bst4CI ACNGT 7 cut(s) 76, 290, 1038, 1105, 1170, 1868, 1903
Bst6I CTCTTC 9 cut(s) 23, 56, 78, 141, 549, 668, 1755, 1815, 2145
BstC8I GCNNGC 3 cut(s) 1143, 1431, 2262
BstDEI CTNAG 6 cut(s) 329, 501, 1641, 1713, 2493, 2578
BstENI CCTNNNNNAGG 2 cut(s) 522, 1509
BstF5I GGATG 5 cut(s) 85, 803, 967, 2207, 2223
BstFNI CGCG 2 cut(s) 1918, 2471
BstHHI GCGC 2 cut(s) 1251, 1918
BstMAI GTCTC 5 cut(s) 230, 533, 563, 754, 1213
BstMWI GCNNNNNNNGC 9 cut(s) 1439, 1448, 1568, 1709, 1723, 1913, 1924, 2257, 2574
BstNI CCWGG 1 cut(s) 1978
BstNSI RCATGY 2 cut(s) 377, 2408
BstSCI CCNGG 1 cut(s) 1976
BstSFI CTRYAG 1 cut(s) 1322
BstSLI GKGCMC 1 cut(s) 898
BstUI CGCG 2 cut(s) 1918, 2471
BstV1I GCAGC 9 cut(s) 575, 655, 681, 1157, 1233, 1583, 1649, 1709, 1712
BstV2I GAAGAC 3 cut(s) 203, 932, 1791
BstX2I RGATCY 5 cut(s) 1501, 1543, 1606, 1744, 2536
BstYI RGATCY 5 cut(s) 1501, 1543, 1606, 1744, 2536
BsuRI GGCC 6 cut(s) 188, 277, 339, 1165, 2260, 2321
BtsCI GGATG 5 cut(s) 85, 803, 967, 2207, 2223
BtsIMutI CAGTG 4 cut(s) 81, 317, 1110, 1873
BveI ACCTGC 1 cut(s) 2098
Cac8I GCNNGC 3 cut(s) 1143, 1431, 2262
CaiI CAGNNNCTG 1 cut(s) 2132
CfoI GCGC 2 cut(s) 1251, 1918
Cfr10I RCCGGY 2 cut(s) 1936, 2260
Cfr13I GGNCC 3 cut(s) 338, 637, 988
CseI GACGC 1 cut(s) 626
Csp6I GTAC 2 cut(s) 98, 1346
CspAI ACCGGT 1 cut(s) 1936
CspCI CAANNNNNGTGG 2 cut(s) 531, 566
CviAII CATG 6 cut(s) 273, 374, 1137, 1288, 2405, 2533
CviQI GTAC 2 cut(s) 98, 1346
DdeI CTNAG 6 cut(s) 329, 501, 1641, 1713, 2493, 2578
Eam1104I CTCTTC 9 cut(s) 23, 56, 78, 141, 549, 668, 1755, 1815, 2145
EarI CTCTTC 9 cut(s) 23, 56, 78, 141, 549, 668, 1755, 1815, 2145
Ecl136II GAGCTC 2 cut(s) 631, 1475
Eco130I CCWWGG 2 cut(s) 1892, 2211
Eco147I AGGCCT 1 cut(s) 188
Eco24I GRGCYC 3 cut(s) 633, 805, 1477
Eco47I GGWCC 2 cut(s) 637, 988
Eco53kI GAGCTC 2 cut(s) 631, 1475
Eco57I CTGAAG 6 cut(s) 300, 1104, 1568, 1632, 1701, 2397
EcoICRI GAGCTC 2 cut(s) 631, 1475
EcoNI CCTNNNNNAGG 2 cut(s) 522, 1509
EcoO109I RGGNCCY 1 cut(s) 988
EcoRI GAATTC 1 cut(s) 1016
EcoRII CCWGG 1 cut(s) 1976
EcoT14I CCWWGG 2 cut(s) 1892, 2211
EcoT22I ATGCAT 1 cut(s) 454
EcoT38I GRGCYC 3 cut(s) 633, 805, 1477
ErhI CCWWGG 2 cut(s) 1892, 2211
Esp3I CGTCTC 1 cut(s) 1213
FaeI CATG 6 cut(s) 276, 377, 1140, 1291, 2408, 2536
FalI AAGNNNNNCTT 2 cut(s) 173, 205
FaqI GGGAC 2 cut(s) 135, 1001
FatI CATG 6 cut(s) 272, 373, 1136, 1287, 2404, 2532
FauI CCCGC 1 cut(s) 866
FauNDI CATATG 1 cut(s) 2227
FbaI TGATCA 1 cut(s) 1495
FokI GGATG 5 cut(s) 92, 810, 974, 2194, 2230
FriOI GRGCYC 3 cut(s) 633, 805, 1477
FspBI CTAG 4 cut(s) 509, 519, 2049, 2144
GlaI GCGC 2 cut(s) 1250, 1917
GsaI CCCAGC 1 cut(s) 2572
GsuI CTGGAG 1 cut(s) 2375
HaeIII GGCC 6 cut(s) 188, 277, 339, 1165, 2260, 2321
HapII CCGG 3 cut(s) 1185, 1937, 2261
HgaI GACGC 1 cut(s) 626
HhaI GCGC 2 cut(s) 1251, 1918
Hin1II CATG 6 cut(s) 276, 377, 1140, 1291, 2408, 2536
Hin6I GCGC 2 cut(s) 1249, 1916
HinP1I GCGC 2 cut(s) 1249, 1916
HincII GTYRAC 1 cut(s) 379
HindII GTYRAC 1 cut(s) 379
HindIII AAGCTT 4 cut(s) 443, 1264, 1431, 2575
HinfI GANTC 9 cut(s) 480, 505, 1047, 1079, 1304, 1765, 1883, 1968, 2491
HpaII CCGG 3 cut(s) 1185, 1937, 2261
HphI GGTGA 3 cut(s) 1878, 1951, 2014
Hpy166II GTNNAC 5 cut(s) 98, 286, 350, 379, 896
Hpy188I TCNGA 9 cut(s) 266, 502, 1057, 1084, 1548, 1735, 1783, 2238, 2496
Hpy8I GTNNAC 5 cut(s) 98, 286, 350, 379, 896
HpyCH4III ACNGT 7 cut(s) 76, 290, 1038, 1105, 1170, 1868, 1903
HpyF10VI GCNNNNNNNGC 9 cut(s) 1439, 1448, 1568, 1709, 1723, 1913, 1924, 2257, 2574
HpyF3I CTNAG 6 cut(s) 329, 501, 1641, 1713, 2493, 2578
Hsp92II CATG 6 cut(s) 276, 377, 1140, 1291, 2408, 2536
HspAI GCGC 2 cut(s) 1249, 1916
KroI GCCGGC 1 cut(s) 2260
KroNI GCCGGC 1 cut(s) 2262
Ksp22I TGATCA 1 cut(s) 1495
LguI GCTCTTC 1 cut(s) 1815
LmnI GCTCC 4 cut(s) 53, 169, 1514, 2356
Lsp1109I GCAGC 9 cut(s) 575, 655, 681, 1157, 1233, 1583, 1649, 1709, 1712
LweI GCATC 4 cut(s) 439, 1660, 1938, 2213
MaeI CTAG 4 cut(s) 509, 519, 2049, 2144
MaeIII GTNAC 4 cut(s) 595, 1884, 1939, 2002
MbiI CCGCTC 1 cut(s) 873
MflI RGATCY 5 cut(s) 1501, 1543, 1606, 1744, 2536
MhlI GDGCHC 4 cut(s) 633, 805, 898, 1477
MlyI GAGTC 2 cut(s) 1892, 2485
MmeI TCCRAC 1 cut(s) 1793
Mph1103I ATGCAT 1 cut(s) 454
MroNI GCCGGC 1 cut(s) 2260
MroXI GAANNNNTTC 2 cut(s) 1764, 2033
MslI CAYNNNNRTG 1 cut(s) 2527
MspA1I CMGCKG 2 cut(s) 1574, 1640
MspI CCGG 3 cut(s) 1185, 1937, 2261
MspR9I CCNGG 1 cut(s) 1978
Mva1269I GAATGC 3 cut(s) 565, 1015, 2522
MvaI CCWGG 1 cut(s) 1978
MvnI CGCG 2 cut(s) 1918, 2471
MwoI GCNNNNNNNGC 9 cut(s) 1439, 1448, 1568, 1709, 1723, 1913, 1924, 2257, 2574
NaeI GCCGGC 1 cut(s) 2262
NdeI CATATG 1 cut(s) 2227
NgoMIV GCCGGC 1 cut(s) 2260
NlaIII CATG 6 cut(s) 276, 377, 1140, 1291, 2408, 2536
NlaIV GGNNCC 5 cut(s) 171, 989, 1503, 1608, 2538
NmuCI GTSAC 4 cut(s) 595, 1884, 1939, 2002
NsiI ATGCAT 1 cut(s) 454
NspI RCATGY 2 cut(s) 377, 2408
PacI TTAATTAA 1 cut(s) 1374
PasI CCCWGGG 1 cut(s) 1977
PceI AGGCCT 1 cut(s) 188
PciI ACATGT 1 cut(s) 2404
PciSI GCTCTTC 1 cut(s) 1815
PctI GAATGC 3 cut(s) 565, 1015, 2522
PdiI GCCGGC 1 cut(s) 2262
PdmI GAANNNNTTC 2 cut(s) 1764, 2033
PfeI GAWTC 7 cut(s) 480, 505, 1047, 1079, 1304, 1765, 1968
PinAI ACCGGT 1 cut(s) 1936
PleI GAGTC 2 cut(s) 1891, 2485
PpsI GAGTC 2 cut(s) 1891, 2485
PpuMI RGGWCCY 1 cut(s) 988
PscI ACATGT 1 cut(s) 2404
PshBI ATTAAT 1 cut(s) 2139
Psp124BI GAGCTC 2 cut(s) 633, 1477
Psp5II RGGWCCY 1 cut(s) 988
Psp6I CCWGG 1 cut(s) 1976
PspFI CCCAGC 1 cut(s) 2568
PspGI CCWGG 1 cut(s) 1976
PspN4I GGNNCC 5 cut(s) 171, 989, 1503, 1608, 2538
PspPI GGNCC 3 cut(s) 338, 637, 988
PspPPI RGGWCCY 1 cut(s) 988
PstNI CAGNNNCTG 1 cut(s) 2132
PsuI RGATCY 5 cut(s) 1501, 1543, 1606, 1744, 2536
PvuII CAGCTG 2 cut(s) 1574, 1640
RsaI GTAC 2 cut(s) 99, 1347
RsaNI GTAC 2 cut(s) 98, 1346
RseI CAYNNNNRTG 1 cut(s) 2527
SacI GAGCTC 2 cut(s) 633, 1477
SapI GCTCTTC 1 cut(s) 1815
Sau96I GGNCC 3 cut(s) 338, 637, 988
SchI GAGTC 2 cut(s) 1892, 2485
ScrFI CCNGG 1 cut(s) 1978
SduI GDGCHC 4 cut(s) 633, 805, 898, 1477
SfaNI GCATC 4 cut(s) 439, 1660, 1938, 2213
SfcI CTRYAG 1 cut(s) 1322
SgrAI CRCCGGYG 1 cut(s) 1936
SinI GGWCC 2 cut(s) 637, 988
SmiMI CAYNNNNRTG 1 cut(s) 2527
SmlI CTYRAG 3 cut(s) 632, 804, 1461
SmoI CTYRAG 3 cut(s) 632, 804, 1461
SseBI AGGCCT 1 cut(s) 188
SsiI CCGC 6 cut(s) 873, 1442, 1598, 1907, 2469, 2501
SspMI CTAG 4 cut(s) 509, 519, 2049, 2144
SstI GAGCTC 2 cut(s) 633, 1477
StuI AGGCCT 1 cut(s) 188
StyD4I CCNGG 1 cut(s) 1976
StyI CCWWGG 2 cut(s) 1892, 2211
TaaI ACNGT 7 cut(s) 76, 290, 1038, 1105, 1170, 1868, 1903
TaqI TCGA 1 cut(s) 401
TatI WGTACW 2 cut(s) 97, 1345
TauI GCSGC 1 cut(s) 1445
TfiI GAWTC 7 cut(s) 480, 505, 1047, 1079, 1304, 1765, 1968
TscAI CASTG 4 cut(s) 81, 324, 1110, 1873
TseFI GTSAC 4 cut(s) 595, 1884, 1939, 2002
TseI GCWGC 9 cut(s) 563, 643, 694, 1145, 1246, 1571, 1637, 1697, 1700
Tsp45I GTSAC 4 cut(s) 595, 1884, 1939, 2002
TspRI CASTG 4 cut(s) 81, 324, 1110, 1873
VneI GTGCAC 1 cut(s) 894
VpaK11BI GGWCC 2 cut(s) 637, 988
VspI ATTAAT 1 cut(s) 2139
XagI CCTNNNNNAGG 2 cut(s) 522, 1509
XapI RAATTY 6 cut(s) 682, 708, 1016, 1729, 1777, 2032
XbaI TCTAGA 1 cut(s) 2143
XceI RCATGY 2 cut(s) 377, 2408
XcmI CCANNNNNNNNNTGG 1 cut(s) 115
XmnI GAANNNNTTC 2 cut(s) 1764, 2033
XspI CTAG 4 cut(s) 509, 519, 2049, 2144
Zsp2I ATGCAT 1 cut(s) 454
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.