MD01G1172100.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
27436542 .. 27439699
3158 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1172100.v1.1.491

Sequence Viewer

Length: 3081 bp
ATGGACATAACCATGATAGTTGTTTTACTTCTAATCAGGGCTCTAGCTATTGCAACCATTTCAATTAGTTTTGGTTCCTGCAATGAAAATCTGGGCTGGACTTCGCTTTGCAAAGAAAACGAAAAGCAATCCCTTTTGATGTTCAAGCAAGATCTCAAGGACCCTGCAAATCGGCTTTCTTCGTGGGTTGATGAAGAAGATTCCGACTGTTGTACTTGGACCGGAGTTATCTGCGATGACTTAACTGGTCACATCCGCAAGCTTCATCTTGGTAATTCCAACCCTTCATTGAATTTCAACTCTTCCTTGGGTGGCAAGGTAAGTCATTCTTTGCTCAATTTAAAGCATCTCAACTACTTGGACTTAAGCAACAATGATTTTCAAGAAGCACAGGTTCCAAAGTTCTTTGGTTCTCTTAGAAGTTTAAGATATCTTAACCTCTCAAAAGCAGGATTCGCAGGAATAATTCCTCATCAGTTGGGAAATCTCTCGAGTCTACGCTACCTCTCTCTCAGTAATTACATGCTTAAGGCTGAGAACCTTCAATGGATTTCTGGTCTCTCTCATTTGGAACACCTGGACATGAACTCTGTTGATCTTAGCAAAGCATCCGACTGGTTGCAAGTCACAAACATGCTCCCCTCTTTGAAAGAGTTGCATATGTTCGACTGCAGACTTGATCACATTCCACCTCTGCCTTCAATTAATTTTACTTCGCTTGCCATTCTCGATCTTTCTGCAAACATGTTTGCTTCTTCGATTCCCAAATGGGTTTTCAGTCTTGAAAATCTAGTTTCTCTTTCCCTCGGTAACTGTGGTTTCCGGGGTCCAATCCCAAACTATCCACAAAACATCAGCTCTCTCAGGGAAATTGATTTCTCGTTGAACAATCTTAGTCTTCCGATACCCAAATGGCTGTTCAACCATAAAGACCTTGCTTCTTTGAATCTAGGATACAATTCTCTTGAAGGACCAATTCCACATGGTATTCTAAACATGACTGGTCTTAAAGTTCTTAATCTCGAGTCGAACCTCTTCAATTGTACTATACCTGAATGGCTGTACAGTTTTAGCAATCTCGAGTCCTTGTTTCTTTCTAGCAATCACTTGCAGGGTGAAATTTCAAGCTCCGTTGGAAAATTGACATCCATTGTTAGCCTTCGGTTGGATAATAATCAGCTGGAAGGGAAAATCCCAAAGTCATTGGAAAAGCTTTGTAAGTTGATGGATCTTGATCTGTCGATGAACAACTTCACAGTTGGAAAGGTATCAGAAATCATCGACAGTTTGTCCGGTGTGTGTGCTTCAGCTAAAATGAAGTCTTTGTCGTTGAGTTATTGCAATCTTTCTGGTCATTTGACAGAGAAGATAGGAGATTTTAAAAGTTTAAGCAACCTTGATCTTTCTGGTAATTCAATATCAGGTCCCGTTCCAGTGTCACTAGGGAATTTGTCATTCCTAGTTAACCTAGACATCTCTGACAATCAATTCAATGGGACACTTCCAGAAATTATTGGTCAGCTCGAATTTCTTACGAATTTGGATGTGTCATATAATTCATTAGAAGGCGTGGTGTCTGAAGTCCATTTTACTAGGCTCACAAGACTGCTGGAGTTCAATGCAAAAGGAAACTCATTCATTCTGAATACTAGTAAAAAATGGCTTCCTCCTTTTCAACTTCACCAGTTATACCTAGATTCTTGGCATTTGGGGCCTGAATTGCCTAACTGGCTTCGATCACAAACTCAAGTTTGGTCTCTAAGCTTGTCGAATACAGGGATTTCGGAGGTTCAAGATATGGTGGTTGGCCCTTCATTAGTGATCGACATGGGTTCTAACCGGTTCAATGGTTCATTACCTTTGCTTCCCTCCACAGTTTATATGCTAGATCTTTCCAATTCATCCTTTTCCGGATCTGTCTCCCGCTTCTTTTGTGATAGTGTGGACGAACCAAAAGAACTCTATCTTCTCAATCTTGGAAAAAATCTTCTCACCGGAAAAATTCCTGATTGTTGGATGAATTGGCAAAAGTTGGCGGTCTTAAATTTGGAAAGCAACAATTTAACTGGGTACATTCCAAGCTCCATTGGATACTTGTTCAACCTCAAATCATTGCAGTTGCTCAATAATCAACTATCCGGAGAATTACCTCTGTCCCTACAGAACTGTACCGAGTTGTCTGTTGTTGACCTTGGTGGGAATAAGTTTATCGGAAGCTTGCCAATGTGGATAGGGAAAAGCCTCTCAAATTTGATGCTTTTGAACTTCCGTTCGAACAAGCTTCATGGAGACATTCCTCATGAACTCTGTAATCTCATAAATCTCCAAATCTTGGACCTAGCGGATAACAATCTTTCAGGGACAATACCAAGATGCTTCCACAATTTTAGTGCCATGGCCACCTTGTCAAATTCAAACAGTCCGAATATTTTGTTGTTTGACATTTTTTCTTATGGGAGGTACCTAGTCGAAGCAATCCTGGTGACCAAGGGTAGAAAAATGGAATATCGCGAAATTCTTGGATTGGTAACTAGCATGGACCTTTCGAACAACATTATATCCGGAGAGATCCCTGAGGAACTGACCAGCCTACTCCATTTACGAACACTGAACTTATCAAAAAATCTTTTGACTGGAGGAATCCCTTCAAAGGTTGGAAACTTGAGACGAATTGAATCTCTTGACTTTTCGATGAACCAGCTTGATGGAGAAATTCCTCAAAGCATGAGGAGTTTGACATTCTTGAGTCACTTAAACTTGTCCGACAACAATTTGATGGGACAGATTCCAGAAAGCACTCAGCTCCAGAGCCTTGATCCGTCCAGCTTTATCGGCAATGAACTCTGTGGTGCTCCACTTGACGATTGCAGTGCAACTCGGGTGATACCGGCAGCAGTTGAGAAAGACAGAGAATACAATTTGCTTGAAGACAAGTGGTTCTATGTTAGCTTGGGATTGGGATTCATGTTCGGTTTTTGGACTTTACTTGGTTTGTTGCTGGTAGACACGCCATTGAGCAATGTTATCTTAAGATTCCTAAATAGTATCGTAGGAAAAATTTATGGTGTAATTGTTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1027

Amino Acids

113.84

Weight (kDa)

5.34

Isoelectric Point (pI)

30.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 79 1.1e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 106 - 269 6.1e-12 Leucine-rich repeat region
LRR_8 PF13855 312 - 370 4.7e-06 Leucine rich repeat
LRR_14 PF23598 429 - 527 7.1e-07 Leucine-rich repeat region
LRR_14 PF23598 674 - 783 3.4e-07 Leucine-rich repeat region
LRR_8 PF13855 725 - 785 3e-06 Leucine rich repeat
LRR_14 PF23598 859 - 939 4.2e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 2460
AccB1I GGYRCC 1 cut(s) 2460
AccB7I CCANNNNNTGG 1 cut(s) 2332
AccI GTMKAC 2 cut(s) 496, 3003
AccII CGCG 1 cut(s) 2511
AccIII TCCGGA 3 cut(s) 1910, 2138, 2561
AciI CCGC 4 cut(s) 256, 1924, 2036, 2342
AclWI GGATC 4 cut(s) 1236, 1921, 2563, 2810
AcoI YGGCCR 1 cut(s) 2397
AcuI CTGAAG 2 cut(s) 1290, 1599
AfaI GTAC 6 cut(s) 214, 1045, 1064, 2072, 2170, 2462
AfiI CCNNNNNNNGG 3 cut(s) 1165, 2332, 2650
AflII CTTAAG 3 cut(s) 364, 527, 3028
AflIII ACRYGT 1 cut(s) 744
AgeI ACCGGT 1 cut(s) 1839
AhdI GACNNNNNGTC 1 cut(s) 1288
AhlI ACTAGT 1 cut(s) 1649
AjnI CCWGG 2 cut(s) 576, 2478
AjuI GAANNNNNNNTTGG 4 cut(s) 758, 790, 902, 934
Alw21I GWGCWC 1 cut(s) 2854
Alw26I GTCTC 5 cut(s) 563, 1761, 1924, 2283, 2659
AlwI GGATC 4 cut(s) 1236, 1921, 2563, 2810
Ama87I CYCGRG 4 cut(s) 490, 1022, 1079, 2877
Aor13HI TCCGGA 3 cut(s) 1910, 2138, 2561
AoxI GGCC 3 cut(s) 1712, 1807, 2397
ApeKI GCWGC 1 cut(s) 2891
AseI ATTAAT 1 cut(s) 705
AsiGI ACCGGT 1 cut(s) 1839
Asp700I GAANNNNTTC 3 cut(s) 1034, 1250, 2644
Asp718I GGTACC 1 cut(s) 2460
AspS9I GGNCC 9 cut(s) 160, 219, 827, 971, 1424, 1712, 1808, 2335, 2539
AsuC2I CCSGG 1 cut(s) 824
AsuHPI GGTGA 5 cut(s) 1127, 1673, 1984, 2494, 2893
AsuII TTCGAA 2 cut(s) 2273, 2546
AvaI CYCGRG 4 cut(s) 490, 1022, 1079, 2877
AvaII GGWCC 7 cut(s) 160, 219, 827, 971, 1424, 2335, 2539
AxyI CCTNAGG 1 cut(s) 2574
BalI TGGCCA 1 cut(s) 2399
BanI GGYRCC 1 cut(s) 2460
BanII GRGCYC 1 cut(s) 43
BbsI GAAGAC 2 cut(s) 890, 2934
Bbv12I GWGCWC 1 cut(s) 2854
BbvI GCAGC 1 cut(s) 2903
BccI CCATC 3 cut(s) 1219, 2699, 2770
BcgI CGANNNNNNTGC 4 cut(s) 719, 753, 2852, 2886
BciT130I CCWGG 2 cut(s) 578, 2480
BciVI GTATCC 2 cut(s) 947, 2084
BclI TGATCA 1 cut(s) 679
BcnI CCSGG 1 cut(s) 824
BcoDI GTCTC 5 cut(s) 563, 1761, 1924, 2283, 2659
BcuI ACTAGT 1 cut(s) 1649
BfmI CTRYAG 2 cut(s) 670, 2159
BfrI CTTAAG 3 cut(s) 364, 527, 3028
BfuI GTATCC 2 cut(s) 947, 2084
BglI GCCNNNNNGGC 1 cut(s) 1729
BglII AGATCT 2 cut(s) 151, 1888
BisI GCNGC 1 cut(s) 2892
BlsI GCNGC 1 cut(s) 2893
Bme1390I CCNGG 3 cut(s) 578, 824, 2480
Bme18I GGWCC 7 cut(s) 160, 219, 827, 971, 1424, 2335, 2539
BmeRI GACNNNNNGTC 1 cut(s) 1288
BmeT110I CYCGRG 4 cut(s) 490, 1022, 1079, 2877
BmgT120I GGNCC 9 cut(s) 160, 219, 827, 971, 1424, 1712, 1808, 2335, 2539
BmiI GGNNCC 7 cut(s) 76, 162, 396, 828, 1426, 1713, 2462
BmrFI CCNGG 3 cut(s) 578, 824, 2480
BmrI ACTGGG 1 cut(s) 2076
BmsI GCATC 4 cut(s) 355, 617, 2244, 2363
BmuI ACTGGG 1 cut(s) 2076
BpiI GAAGAC 2 cut(s) 890, 2934
BpmI CTGGAG 3 cut(s) 1631, 2655, 2789
Bpu14I TTCGAA 2 cut(s) 2273, 2546
BpuEI CTTGAG 4 cut(s) 140, 1731, 2683, 2764
BpuMI CCSGG 1 cut(s) 824
BsaBI GATNNNNATC 3 cut(s) 1173, 1233, 2349
BsaI GGTCTC 2 cut(s) 563, 1761
BsaJI CCNNGG 6 cut(s) 306, 805, 823, 2191, 2394, 2487
BsaWI WCCGGW 7 cut(s) 221, 1292, 1839, 1910, 1994, 2138, 2561
Bsc4I CCNNNNNNNGG 3 cut(s) 1165, 2332, 2650
Bse118I RCCGGY 2 cut(s) 1839, 2887
Bse1I ACTGG 8 cut(s) 250, 620, 1006, 1433, 1684, 1733, 2071, 2638
Bse21I CCTNAGG 1 cut(s) 2574
Bse3DI GCAATG 4 cut(s) 88, 2111, 2842, 3025
Bse8I GATNNNNATC 3 cut(s) 1173, 1233, 2349
BseAI TCCGGA 3 cut(s) 1910, 2138, 2561
BseBI CCWGG 2 cut(s) 578, 2480
BseDI CCNNGG 6 cut(s) 306, 805, 823, 2191, 2394, 2487
BseGI GGATG 6 cut(s) 252, 608, 1145, 1549, 1901, 2022
BseJI GATNNNNATC 3 cut(s) 1173, 1233, 2349
BseLI CCNNNNNNNGG 3 cut(s) 1165, 2332, 2650
BseMI GCAATG 4 cut(s) 88, 2111, 2842, 3025
BseMII CTCAG 5 cut(s) 525, 526, 877, 2565, 2813
BseNI ACTGG 8 cut(s) 250, 620, 1006, 1433, 1684, 1733, 2071, 2638
BseRI GAGGAG 1 cut(s) 2743
BseXI GCAGC 1 cut(s) 2903
Bsh1236I CGCG 1 cut(s) 2511
BshFI GGCC 3 cut(s) 1714, 1809, 2399
BshNI GGYRCC 1 cut(s) 2460
BshTI ACCGGT 1 cut(s) 1839
BsiHKAI GWGCWC 1 cut(s) 2854
BsiHKCI CYCGRG 4 cut(s) 490, 1022, 1079, 2877
BsiSI CCGG 9 cut(s) 222, 823, 1293, 1840, 1911, 1995, 2139, 2562, 2888
BslFI GGGAC 5 cut(s) 1410, 1510, 2140, 2374, 2793
BslI CCNNNNNNNGG 3 cut(s) 1165, 2332, 2650
BsmAI GTCTC 5 cut(s) 563, 1761, 1924, 2283, 2659
BsmBI CGTCTC 1 cut(s) 2659
BsmFI GGGAC 5 cut(s) 1410, 1510, 2140, 2374, 2793
BsnI GGCC 3 cut(s) 1714, 1809, 2399
Bso31I GGTCTC 2 cut(s) 563, 1761
BsoBI CYCGRG 4 cut(s) 490, 1022, 1079, 2877
Bsp119I TTCGAA 2 cut(s) 2273, 2546
Bsp1286I GDGCHC 2 cut(s) 43, 2854
Bsp13I TCCGGA 3 cut(s) 1910, 2138, 2561
Bsp1407I TGTACA 1 cut(s) 1062
Bsp19I CCATGG 1 cut(s) 2394
Bsp68I TCGCGA 1 cut(s) 2511
BspACI CCGC 4 cut(s) 256, 1924, 2036, 2342
BspANI GGCC 3 cut(s) 1714, 1809, 2399
BspCNI CTCAG 5 cut(s) 525, 526, 876, 2566, 2812
BspEI TCCGGA 3 cut(s) 1910, 2138, 2561
BspFNI CGCG 1 cut(s) 2511
BspHI TCATGA 1 cut(s) 2299
BspLI GGNNCC 7 cut(s) 76, 162, 396, 828, 1426, 1713, 2462
BspMAI CTGCAG 1 cut(s) 674
BspPI GGATC 4 cut(s) 1236, 1921, 2563, 2810
BspT104I TTCGAA 2 cut(s) 2273, 2546
BspT107I GGYRCC 1 cut(s) 2460
BspTI CTTAAG 3 cut(s) 364, 527, 3028
BspTNI GGTCTC 2 cut(s) 563, 1761
BsrDI GCAATG 4 cut(s) 88, 2111, 2842, 3025
BsrFI RCCGGY 2 cut(s) 1839, 2887
BsrGI TGTACA 1 cut(s) 1062
BsrI ACTGG 8 cut(s) 250, 620, 1006, 1433, 1684, 1733, 2071, 2638
BssAI RCCGGY 2 cut(s) 1839, 2887
BssECI CCNNGG 6 cut(s) 306, 805, 823, 2191, 2394, 2487
BssT1I CCWWGG 4 cut(s) 306, 2191, 2394, 2487
Bst2UI CCWGG 2 cut(s) 578, 2480
Bst4CI ACNGT 8 cut(s) 209, 815, 1067, 1258, 1286, 1876, 2168, 2420
Bst6I CTCTTC 2 cut(s) 307, 1040
BstAFI CTTAAG 3 cut(s) 364, 527, 3028
BstAUI TGTACA 1 cut(s) 1062
BstBI TTCGAA 2 cut(s) 2273, 2546
BstC8I GCNNGC 3 cut(s) 260, 720, 2219
BstDEI CTNAG 9 cut(s) 416, 512, 534, 599, 863, 893, 1760, 2574, 2799
BstDSI CCRYGG 1 cut(s) 2394
BstEII GGTNACC 1 cut(s) 2482
BstF5I GGATG 6 cut(s) 252, 608, 1145, 1549, 1901, 2022
BstFNI CGCG 1 cut(s) 2511
BstMAI GTCTC 5 cut(s) 563, 1761, 1924, 2283, 2659
BstMWI GCNNNNNNNGC 5 cut(s) 455, 1711, 1720, 1729, 2832
BstNI CCWGG 2 cut(s) 578, 2480
BstNSI RCATGY 3 cut(s) 526, 637, 748
BstPI GGTNACC 1 cut(s) 2482
BstSCI CCNGG 3 cut(s) 576, 822, 2478
BstSFI CTRYAG 2 cut(s) 670, 2159
BstUI CGCG 1 cut(s) 2511
BstV1I GCAGC 1 cut(s) 2903
BstV2I GAAGAC 2 cut(s) 890, 2934
BstX2I RGATCY 5 cut(s) 151, 1228, 1888, 1913, 2568
BstXI CCANNNNNNTGG 1 cut(s) 2705
BstYI RGATCY 5 cut(s) 151, 1228, 1888, 1913, 2568
Bsu36I CCTNAGG 1 cut(s) 2574
BsuI GTATCC 2 cut(s) 947, 2084
BsuRI GGCC 3 cut(s) 1714, 1809, 2399
BtgI CCRYGG 1 cut(s) 2394
BtgZI GCGATG 1 cut(s) 249
BtsCI GGATG 6 cut(s) 252, 608, 1145, 1549, 1901, 2022
BtsI GCAGTG 1 cut(s) 2875
BtsIMutI CAGTG 3 cut(s) 1440, 2606, 2875
BtuMI TCGCGA 1 cut(s) 2511
Cac8I GCNNGC 3 cut(s) 260, 720, 2219
CciI TCATGA 1 cut(s) 2299
Cfr10I RCCGGY 2 cut(s) 1839, 2887
Cfr13I GGNCC 9 cut(s) 160, 219, 827, 971, 1424, 1712, 1808, 2335, 2539
Csp6I GTAC 6 cut(s) 213, 1044, 1063, 2071, 2169, 2461
CspAI ACCGGT 1 cut(s) 1839
CviQI GTAC 6 cut(s) 213, 1044, 1063, 2071, 2169, 2461
DdeI CTNAG 9 cut(s) 416, 512, 534, 599, 863, 893, 1760, 2574, 2799
DraI TTTAAA 2 cut(s) 342, 1381
DriI GACNNNNNGTC 1 cut(s) 1288
EaeI YGGCCR 1 cut(s) 2397
Eam1104I CTCTTC 2 cut(s) 307, 1040
Eam1105I GACNNNNNGTC 1 cut(s) 1288
EarI CTCTTC 2 cut(s) 307, 1040
Eco130I CCWWGG 4 cut(s) 306, 2191, 2394, 2487
Eco24I GRGCYC 1 cut(s) 43
Eco31I GGTCTC 2 cut(s) 563, 1761
Eco32I GATATC 1 cut(s) 431
Eco47I GGWCC 7 cut(s) 160, 219, 827, 971, 1424, 2335, 2539
Eco57I CTGAAG 2 cut(s) 1290, 1599
Eco81I CCTNAGG 1 cut(s) 2574
Eco88I CYCGRG 4 cut(s) 490, 1022, 1079, 2877
Eco91I GGTNACC 1 cut(s) 2482
EcoO109I RGGNCCY 3 cut(s) 160, 1424, 1712
EcoO65I GGTNACC 1 cut(s) 2482
EcoRII CCWGG 2 cut(s) 576, 2478
EcoRV GATATC 1 cut(s) 431
EcoT14I CCWWGG 4 cut(s) 306, 2191, 2394, 2487
EcoT38I GRGCYC 1 cut(s) 43
ErhI CCWWGG 4 cut(s) 306, 2191, 2394, 2487
Esp3I CGTCTC 1 cut(s) 2659
FalI AAGNNNNNCTT 2 cut(s) 313, 345
FaqI GGGAC 5 cut(s) 1410, 1510, 2140, 2374, 2793
FauI CCCGC 1 cut(s) 1931
FauNDI CATATG 1 cut(s) 660
FbaI TGATCA 1 cut(s) 679
FblI GTMKAC 2 cut(s) 496, 3003
Fnu4HI GCNGC 1 cut(s) 2892
FokI GGATG 6 cut(s) 239, 595, 1132, 1556, 1888, 2029
FriOI GRGCYC 1 cut(s) 43
Fsp4HI GCNGC 1 cut(s) 2892
GluI GCNGC 1 cut(s) 2892
GsuI CTGGAG 3 cut(s) 1631, 2655, 2789
HaeIII GGCC 3 cut(s) 1714, 1809, 2399
HapII CCGG 9 cut(s) 222, 823, 1293, 1840, 1911, 1995, 2139, 2562, 2888
HincII GTYRAC 2 cut(s) 1465, 2188
HindII GTYRAC 2 cut(s) 1465, 2188
HindIII AAGCTT 5 cut(s) 260, 1211, 1762, 2215, 2279
HpaI GTTAAC 1 cut(s) 1465
HpaII CCGG 9 cut(s) 222, 823, 1293, 1840, 1911, 1995, 2139, 2562, 2888
HphI GGTGA 5 cut(s) 1127, 1673, 1984, 2494, 2893
Hpy166II GTNNAC 5 cut(s) 497, 1465, 1945, 2188, 3004
Hpy8I GTNNAC 5 cut(s) 497, 1465, 1945, 2188, 3004
HpyAV CCTTC 9 cut(s) 294, 551, 708, 962, 1169, 1178, 1559, 1821, 2655
HpyCH4III ACNGT 8 cut(s) 209, 815, 1067, 1258, 1286, 1876, 2168, 2420
HpyF10VI GCNNNNNNNGC 5 cut(s) 455, 1711, 1720, 1729, 2832
HpyF3I CTNAG 9 cut(s) 416, 512, 534, 599, 863, 893, 1760, 2574, 2799
Kpn2I TCCGGA 3 cut(s) 1910, 2138, 2561
KpnI GGTACC 1 cut(s) 2464
Ksp22I TGATCA 1 cut(s) 679
KspAI GTTAAC 1 cut(s) 1465
LmnI GCTCC 5 cut(s) 642, 1133, 2087, 2808, 2857
Lsp1109I GCAGC 1 cut(s) 2903
LweI GCATC 4 cut(s) 355, 617, 2244, 2363
MaeIII GTNAC 7 cut(s) 248, 625, 809, 1437, 2482, 2527, 2747
MfeI CAATTG 1 cut(s) 1039
MflI RGATCY 5 cut(s) 151, 1228, 1888, 1913, 2568
MhlI GDGCHC 2 cut(s) 43, 2854
MlsI TGGCCA 1 cut(s) 2399
MluNI TGGCCA 1 cut(s) 2399
MlyI GAGTC 4 cut(s) 502, 1034, 1091, 2755
MmeI TCCRAC 9 cut(s) 228, 303, 636, 1114, 1146, 1240, 1994, 2635, 2787
Mox20I TGGCCA 1 cut(s) 2399
MroI TCCGGA 3 cut(s) 1910, 2138, 2561
MroXI GAANNNNTTC 3 cut(s) 1034, 1250, 2644
MscI TGGCCA 1 cut(s) 2399
MslI CAYNNNNRTG 2 cut(s) 11, 632
Msp20I TGGCCA 1 cut(s) 2399
MspA1I CMGCKG 1 cut(s) 1180
MspCI CTTAAG 3 cut(s) 364, 527, 3028
MspI CCGG 9 cut(s) 222, 823, 1293, 1840, 1911, 1995, 2139, 2562, 2888
MspR9I CCNGG 3 cut(s) 578, 824, 2480
MunI CAATTG 1 cut(s) 1039
MvaI CCWGG 2 cut(s) 578, 2480
MvnI CGCG 1 cut(s) 2511
MwoI GCNNNNNNNGC 5 cut(s) 455, 1711, 1720, 1729, 2832
NciI CCSGG 1 cut(s) 824
NcoI CCATGG 1 cut(s) 2394
NdeI CATATG 1 cut(s) 660
NlaIV GGNNCC 7 cut(s) 76, 162, 396, 828, 1426, 1713, 2462
NmuCI GTSAC 5 cut(s) 248, 625, 1437, 2482, 2747
NruI TCGCGA 1 cut(s) 2511
NspI RCATGY 3 cut(s) 526, 637, 748
NspV TTCGAA 2 cut(s) 2273, 2546
PaeR7I CTCGAG 3 cut(s) 490, 1022, 1079
PagI TCATGA 1 cut(s) 2299
PciI ACATGT 1 cut(s) 744
PdmI GAANNNNTTC 3 cut(s) 1034, 1250, 2644
PflMI CCANNNNNTGG 1 cut(s) 2332
PinAI ACCGGT 1 cut(s) 1839
PkrI GCNGC 1 cut(s) 2893
PleI GAGTC 4 cut(s) 501, 1033, 1090, 2754
PpsI GAGTC 4 cut(s) 501, 1033, 1090, 2754
PpuMI RGGWCCY 2 cut(s) 160, 1424
PscI ACATGT 1 cut(s) 744
PshBI ATTAAT 1 cut(s) 705
Psp5II RGGWCCY 2 cut(s) 160, 1424
Psp6I CCWGG 2 cut(s) 576, 2478
PspEI GGTNACC 1 cut(s) 2482
PspGI CCWGG 2 cut(s) 576, 2478
PspN4I GGNNCC 7 cut(s) 76, 162, 396, 828, 1426, 1713, 2462
PspPI GGNCC 9 cut(s) 160, 219, 827, 971, 1424, 1712, 1808, 2335, 2539
PspPPI RGGWCCY 2 cut(s) 160, 1424
PstI CTGCAG 1 cut(s) 674
PsuI RGATCY 5 cut(s) 151, 1228, 1888, 1913, 2568
PvuII CAGCTG 1 cut(s) 1180
RruI TCGCGA 1 cut(s) 2511
RsaI GTAC 6 cut(s) 214, 1045, 1064, 2072, 2170, 2462
RsaNI GTAC 6 cut(s) 213, 1044, 1063, 2071, 2169, 2461
RseI CAYNNNNRTG 2 cut(s) 11, 632
SatI GCNGC 1 cut(s) 2892
Sau96I GGNCC 9 cut(s) 160, 219, 827, 971, 1424, 1712, 1808, 2335, 2539
SchI GAGTC 4 cut(s) 502, 1034, 1091, 2755
ScrFI CCNGG 3 cut(s) 578, 824, 2480
SduI GDGCHC 2 cut(s) 43, 2854
SfaNI GCATC 4 cut(s) 355, 617, 2244, 2363
SfcI CTRYAG 2 cut(s) 670, 2159
Sfr274I CTCGAG 3 cut(s) 490, 1022, 1079
SfuI TTCGAA 2 cut(s) 2273, 2546
SinI GGWCC 7 cut(s) 160, 219, 827, 971, 1424, 2335, 2539
SlaI CTCGAG 3 cut(s) 490, 1022, 1079
SmiMI CAYNNNNRTG 2 cut(s) 11, 632
SpeI ACTAGT 1 cut(s) 1649
SsiI CCGC 4 cut(s) 256, 1924, 2036, 2342
SspI AATATT 1 cut(s) 2428
StyD4I CCNGG 3 cut(s) 576, 822, 2478
StyI CCWWGG 4 cut(s) 306, 2191, 2394, 2487
TaaI ACNGT 8 cut(s) 209, 815, 1067, 1258, 1286, 1876, 2168, 2420
TatI WGTACW 3 cut(s) 212, 1043, 1062
TscAI CASTG 3 cut(s) 1440, 2613, 2875
TseFI GTSAC 5 cut(s) 248, 625, 1437, 2482, 2747
TseI GCWGC 1 cut(s) 2891
Tsp45I GTSAC 5 cut(s) 248, 625, 1437, 2482, 2747
TspGWI ACGGA 3 cut(s) 1120, 2258, 2808
TspRI CASTG 3 cut(s) 1440, 2613, 2875
Van91I CCANNNNNTGG 1 cut(s) 2332
Vha464I CTTAAG 3 cut(s) 364, 527, 3028
VpaK11BI GGWCC 7 cut(s) 160, 219, 827, 971, 1424, 2335, 2539
VspI ATTAAT 1 cut(s) 705
XceI RCATGY 3 cut(s) 526, 637, 748
XhoI CTCGAG 3 cut(s) 490, 1022, 1079
XmiI GTMKAC 2 cut(s) 496, 3003
XmnI GAANNNNTTC 3 cut(s) 1034, 1250, 2644
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.