pycom420g00350

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_420
Physical Location & Seq
Reverse (-)
448558 .. 450741
2184 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom420g00350.1

Sequence Viewer

Length: 2184 bp
ATGCCAAGTGGTATTGTGAACTTGACAAATCTTAAAGTTCTTGATCTTGCTGACAATGATGTCAACTCTACCATACCTACATGGTTGTACAGTTTGGGCAATCTTGAGTCCCTCAATCTTTCTTTCAATGCTTTCCATGGTGAAATTTCGAGTTCCCTTGGAAACTTGACTGCCCTTGTTGATCTTCAATTAAGTGGGAATGAGCTTGAAGGGGAAATCCCAAACTCCTTGGGAAAACTTTGTAGGTTGACTTCTGTTGGTCTAAGGGTGAACAATTTTAGGGGGAGGGTATCAGAAATCTTAGAAAGTTTGTCTCGGTGTAGTTTTGATCAAATAGATAATTTAGATTTTTCGAATAATAATTTTTCAGGTCATTTATCTAGTATGCTAGGAATTTTTAAAAATTTAAGTTATCTTGATCTTTCGTATAATTCTATATCAGGTCTCATTCCGGTGTCCTTAGGAAATCTATCATGCTTACAATACTTGAGCATTGATCATAATTCATTCGAGGGTGTTGTCTCTGAAGCTCATTTTACTAATCTTACAAGATTGAAAATGTTTACTGCAAATGAGAACTCCTTGACTCTTAAAACCAACTATGACTGGTTTCCTCCTTTTCAACTTTCTACCTTGAGTTTAGGTTCTTGGCGTCTGGACCCATCAGAGTTGCCTACATGGCTTCAAAGTCAAAATCAGTTGTCTATTCTTAACATGTCCAATACAGGAATTTCAGGTACCATTCCGACTTGGTTCTGGAACATCTTTTCATATGATTTAGCAAACTATGTGGTTCTCTCGAGTAATCAATTGTCCGGGGAGGTTCCAAACATAGTTTCTGCCAACTGGCTAAAACCAAAACACCATTCCAATTCTTTCTCTATGGGTTCAAATTTTGTAATTGACTTAAGATCGATCCAGTTCAACGGTTCATTGCCTCTTGTGTCTTCGGCAGTGTCTATTCTAGATCTTTCCAATTCATCATTTTCGGGAACTCTCTCTCACTTCTTTTGTGATAGGAGTGATGCACCTAAAACCCTTCAAGCTCTTCATCTTGACAACAATCTCCTCGATGGAGAAATTCCTGATTGTCTGTCGTACTGGCCAAACTTGACAACTGTGAATTTAGAAGACAACAATTTGACGGGGAAAATTCCAAGCTCTATTAGAGACTTACTTTTCTTTCGATCATTGCACTTGCGCAATAATAGCCTATCTGGAGAATTACCCGTGTCCCTACAAAATTGTGAGTGGTTGTTTCTTCTTGACCTTGCTGGAGGCATTCCAATATGGTTTGGCCCAAGCTTGGCAGTTCTTAGTCTTCGTTCAAATAAGTTCCATGGTTTCATTCCAGATGAACTCTGTAGTCTCACAAATCTCCAAATCTTGGACCTTGCTTATAACAATCTCTCGGGAACGATACCAAGATGCTTCCAAAATTTTTCATCCATGGCCACTACCCTTTCAAGCGAAGGAGGTACCAGTTTTGAAGATGCTTTTTTTTTGTATGGTATGATTGGTAAGACCAACATAGAGATGATTGGTAGGACCTACATAGAGAATGTGGGTTTTGTGACCAAAGGCAGAGAAGTGAAATACGACACAATGCTTCTTTTGGTAACTAGCTTGGACCTTTCAAGCAACATGATATCTGGAGAAATCCCCGAAGAGCTGACCAGCCTCATTATCTTGCAAACATTGAATTTATCCAATAATCTTCTGACCGGAAGAATCCCTTCCAAAATCGGTGATATGAAAATGTTAGAGTCACTTGATTTGTCTGTGAACCAACTTTCTGGCGAAATTTCTCCAAGCATATCGAACTTGACATTTCTCAGTTATCTGAATTTGTCCTATAACAAGCTGATAGGGCAGATTCCGATAAGCACTCAGCTTCAGAGCTTTGATCAGTCTAGTTATGTTGGCAACAAACTATGCGGACCTCCGTTGAAAGAGCGTTGTAGTGTAAATGAGGCCATGCCACCGGTAGGTGATGACAAGCACGTAGAAGGTTATTTACTTGAAGACGGTGGGTTCTATTTGAGCTTGGGGCTTGGATTTGCATTCAGGTTTTGGATTGTTCTTGGTTCATTGTTGTCTAATGTGCCATGGAGCAATGCATTTTCTCAGTTTCAAAATCGCATTGTGAAGAAGCTTTATGCTGCAATTGTTGAATGTTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

728

Amino Acids

80.39

Weight (kDa)

4.85

Isoelectric Point (pI)

34.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 1 - 122 1.7e-07 Leucine-rich repeat region
LRR_8 PF13855 113 - 169 2.1e-06 Leucine rich repeat
LRR_8 PF13855 434 - 483 4.1e-06 Leucine rich repeat
LRR_8 PF13855 540 - 598 7.9e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1401
AasI GACNNNNNNGTC 1 cut(s) 59
Acc16I TGCGCA 1 cut(s) 1202
Acc65I GGTACC 2 cut(s) 737, 1478
AccB1I GGYRCC 2 cut(s) 737, 1478
AccB7I CCANNNNNTGG 1 cut(s) 1387
AciI CCGC 1 cut(s) 1938
AclWI GGATC 1 cut(s) 910
AcoI YGGCCR 2 cut(s) 1103, 1452
AcuI CTGAAG 2 cut(s) 546, 1880
AcyI GRCGYC 1 cut(s) 652
AfaI GTAC 4 cut(s) 89, 739, 1100, 1480
AfiI CCNNNNNNNGG 3 cut(s) 1306, 1387, 1988
AflII CTTAAG 1 cut(s) 907
AflIII ACRYGT 1 cut(s) 714
AgeI ACCGGT 1 cut(s) 1984
AjuI GAANNNNNNNTTGG 4 cut(s) 820, 850, 852, 882
Alw26I GTCTC 5 cut(s) 318, 449, 526, 1164, 1373
AlwI GGATC 1 cut(s) 910
Ama87I CYCGRG 2 cut(s) 799, 1411
AoxI GGCC 4 cut(s) 1103, 1297, 1452, 1974
ApeKI GCWGC 1 cut(s) 2162
AsiGI ACCGGT 1 cut(s) 1984
Asp700I GAANNNNTTC 1 cut(s) 1735
Asp718I GGTACC 2 cut(s) 737, 1478
AspLEI GCGC 1 cut(s) 1203
AspS9I GGNCC 6 cut(s) 658, 1298, 1390, 1548, 1630, 1940
AsuC2I CCSGG 1 cut(s) 817
AsuHPI GGTGA 4 cut(s) 152, 280, 1760, 2003
AsuII TTCGAA 1 cut(s) 353
AvaI CYCGRG 2 cut(s) 799, 1411
AvaII GGWCC 5 cut(s) 658, 1390, 1548, 1630, 1940
AxyI CCTNAGG 1 cut(s) 460
BalI TGGCCA 2 cut(s) 1105, 1454
BanI GGYRCC 2 cut(s) 737, 1478
BarI GAAGNNNNNNTAC 4 cut(s) 235, 267, 2001, 2033
BbsI GAAGAC 4 cut(s) 939, 1137, 1313, 2031
BbvI GCAGC 1 cut(s) 2149
BccI CCATC 2 cut(s) 670, 1067
BclI TGATCA 3 cut(s) 328, 496, 1906
BcnI CCSGG 1 cut(s) 817
BcoDI GTCTC 5 cut(s) 318, 449, 526, 1164, 1373
BfaI CTAG 5 cut(s) 381, 389, 965, 1623, 1914
BfmI CTRYAG 1 cut(s) 1363
BfrI CTTAAG 1 cut(s) 907
BglI GCCNNNNNGGC 1 cut(s) 679
BglII AGATCT 1 cut(s) 967
BisI GCNGC 1 cut(s) 2163
BlsI GCNGC 1 cut(s) 2164
Bme1390I CCNGG 1 cut(s) 817
Bme18I GGWCC 5 cut(s) 658, 1390, 1548, 1630, 1940
BmeT110I CYCGRG 2 cut(s) 799, 1411
BmgT120I GGNCC 6 cut(s) 658, 1298, 1390, 1548, 1630, 1940
BmiI GGNNCC 4 cut(s) 660, 739, 825, 1480
BmrFI CCNGG 1 cut(s) 817
BmsI GCATC 3 cut(s) 1015, 1418, 1483
BpiI GAAGAC 4 cut(s) 939, 1137, 1313, 2031
BpmI CTGGAG 3 cut(s) 1239, 1296, 1674
Bpu14I TTCGAA 1 cut(s) 353
BpuEI CTTGAG 3 cut(s) 125, 508, 655
BpuMI CCSGG 1 cut(s) 817
Bsa29I ATCGAT 1 cut(s) 914
BsaAI YACGTR 1 cut(s) 2005
BsaHI GRCGYC 1 cut(s) 652
BsaI GGTCTC 1 cut(s) 449
BsaJI CCNNGG 7 cut(s) 136, 157, 228, 816, 1339, 1449, 2108
BsaWI WCCGGW 3 cut(s) 451, 1724, 1984
Bsc4I CCNNNNNNNGG 3 cut(s) 1306, 1387, 1988
Bse118I RCCGGY 1 cut(s) 1984
Bse1I ACTGG 5 cut(s) 611, 851, 919, 1106, 1482
Bse21I CCTNAGG 1 cut(s) 460
Bse3DI GCAATG 3 cut(s) 932, 1190, 2122
BseCI ATCGAT 1 cut(s) 914
BseDI CCNNGG 7 cut(s) 136, 157, 228, 816, 1339, 1449, 2108
BseGI GGATG 1 cut(s) 1445
BseLI CCNNNNNNNGG 3 cut(s) 1306, 1387, 1988
BseMI GCAATG 3 cut(s) 932, 1190, 2122
BseMII CTCAG 3 cut(s) 1849, 1904, 2141
BseNI ACTGG 5 cut(s) 611, 851, 919, 1106, 1482
BseRI GAGGAG 1 cut(s) 1058
BseXI GCAGC 1 cut(s) 2149
BshFI GGCC 4 cut(s) 1105, 1299, 1454, 1976
BshNI GGYRCC 2 cut(s) 737, 1478
BshTI ACCGGT 1 cut(s) 1984
BshVI ATCGAT 1 cut(s) 914
BsiHKCI CYCGRG 2 cut(s) 799, 1411
BsiSI CCGG 4 cut(s) 452, 816, 1725, 1985
BslFI GGGAC 2 cut(s) 94, 1219
BslI CCNNNNNNNGG 3 cut(s) 1306, 1387, 1988
BsmAI GTCTC 5 cut(s) 318, 449, 526, 1164, 1373
BsmFI GGGAC 2 cut(s) 94, 1219
BsmI GAATGC 2 cut(s) 1281, 2063
BsnI GGCC 4 cut(s) 1105, 1299, 1454, 1976
Bso31I GGTCTC 1 cut(s) 449
BsoBI CYCGRG 2 cut(s) 799, 1411
Bsp119I TTCGAA 1 cut(s) 353
Bsp1407I TGTACA 1 cut(s) 87
Bsp19I CCATGG 4 cut(s) 136, 1339, 1449, 2108
BspACI CCGC 1 cut(s) 1938
BspANI GGCC 4 cut(s) 1105, 1299, 1454, 1976
BspCNI CTCAG 3 cut(s) 1848, 1903, 2140
BspDI ATCGAT 1 cut(s) 914
BspLI GGNNCC 4 cut(s) 660, 739, 825, 1480
BspPI GGATC 1 cut(s) 910
BspQI GCTCTTC 2 cut(s) 1053, 1662
BspT104I TTCGAA 1 cut(s) 353
BspT107I GGYRCC 2 cut(s) 737, 1478
BspTI CTTAAG 1 cut(s) 907
BspTNI GGTCTC 1 cut(s) 449
BsrDI GCAATG 3 cut(s) 932, 1190, 2122
BsrFI RCCGGY 1 cut(s) 1984
BsrGI TGTACA 1 cut(s) 87
BsrI ACTGG 5 cut(s) 611, 851, 919, 1106, 1482
BssAI RCCGGY 1 cut(s) 1984
BssECI CCNNGG 7 cut(s) 136, 157, 228, 816, 1339, 1449, 2108
BssNI GRCGYC 1 cut(s) 652
BssT1I CCWWGG 6 cut(s) 136, 157, 228, 1339, 1449, 2108
Bst4CI ACNGT 4 cut(s) 92, 929, 1120, 2030
Bst6I CTCTTC 2 cut(s) 1053, 1662
BstACI GRCGYC 1 cut(s) 652
BstAFI CTTAAG 1 cut(s) 907
BstAUI TGTACA 1 cut(s) 87
BstBAI YACGTR 1 cut(s) 2005
BstBI TTCGAA 1 cut(s) 353
BstDEI CTNAG 7 cut(s) 263, 301, 460, 1316, 1835, 1890, 2127
BstDSI CCRYGG 4 cut(s) 136, 1339, 1449, 2108
BstF5I GGATG 1 cut(s) 1445
BstHHI GCGC 1 cut(s) 1203
BstMAI GTCTC 5 cut(s) 318, 449, 526, 1164, 1373
BstMWI GCNNNNNNNGC 3 cut(s) 679, 1209, 1870
BstNSI RCATGY 1 cut(s) 718
BstSCI CCNGG 1 cut(s) 815
BstSFI CTRYAG 1 cut(s) 1363
BstV1I GCAGC 1 cut(s) 2149
BstV2I GAAGAC 4 cut(s) 939, 1137, 1313, 2031
BstX2I RGATCY 1 cut(s) 967
BstXI CCANNNNNNTGG 1 cut(s) 1796
BstYI RGATCY 1 cut(s) 967
Bsu15I ATCGAT 1 cut(s) 914
Bsu36I CCTNAGG 1 cut(s) 460
BsuRI GGCC 4 cut(s) 1105, 1299, 1454, 1976
BsuTUI ATCGAT 1 cut(s) 914
BtgI CCRYGG 4 cut(s) 136, 1339, 1449, 2108
BtsCI GGATG 1 cut(s) 1445
BtsI GCAGTG 1 cut(s) 960
BtsIMutI CAGTG 1 cut(s) 960
CfoI GCGC 1 cut(s) 1203
Cfr10I RCCGGY 1 cut(s) 1984
Cfr13I GGNCC 6 cut(s) 658, 1298, 1390, 1548, 1630, 1940
ClaI ATCGAT 1 cut(s) 914
CseI GACGC 1 cut(s) 641
Csp6I GTAC 4 cut(s) 88, 738, 1099, 1479
CspAI ACCGGT 1 cut(s) 1984
CspCI CAANNNNNGTGG 2 cut(s) 771, 806
CviQI GTAC 4 cut(s) 88, 738, 1099, 1479
DdeI CTNAG 7 cut(s) 263, 301, 460, 1316, 1835, 1890, 2127
DraI TTTAAA 1 cut(s) 400
DrdI GACNNNNNNGTC 1 cut(s) 59
DseDI GACNNNNNNGTC 1 cut(s) 59
EaeI YGGCCR 2 cut(s) 1103, 1452
Eam1104I CTCTTC 2 cut(s) 1053, 1662
EarI CTCTTC 2 cut(s) 1053, 1662
Eco130I CCWWGG 6 cut(s) 136, 157, 228, 1339, 1449, 2108
Eco31I GGTCTC 1 cut(s) 449
Eco32I GATATC 1 cut(s) 1650
Eco47I GGWCC 5 cut(s) 658, 1390, 1548, 1630, 1940
Eco57I CTGAAG 2 cut(s) 546, 1880
Eco81I CCTNAGG 1 cut(s) 460
Eco88I CYCGRG 2 cut(s) 799, 1411
EcoO109I RGGNCCY 1 cut(s) 1548
EcoRV GATATC 1 cut(s) 1650
EcoT14I CCWWGG 6 cut(s) 136, 157, 228, 1339, 1449, 2108
EcoT22I ATGCAT 1 cut(s) 2122
ErhI CCWWGG 6 cut(s) 136, 157, 228, 1339, 1449, 2108
FalI AAGNNNNNCTT 2 cut(s) 1720, 1752
FaqI GGGAC 2 cut(s) 94, 1219
FauNDI CATATG 1 cut(s) 772
FbaI TGATCA 3 cut(s) 328, 496, 1906
Fnu4HI GCNGC 1 cut(s) 2163
FokI GGATG 1 cut(s) 1432
Fsp4HI GCNGC 1 cut(s) 2163
FspBI CTAG 5 cut(s) 381, 389, 965, 1623, 1914
FspI TGCGCA 1 cut(s) 1202
GlaI GCGC 1 cut(s) 1202
GluI GCNGC 1 cut(s) 2163
GsuI CTGGAG 3 cut(s) 1239, 1296, 1674
HaeIII GGCC 4 cut(s) 1105, 1299, 1454, 1976
HapII CCGG 4 cut(s) 452, 816, 1725, 1985
HgaI GACGC 1 cut(s) 641
HhaI GCGC 1 cut(s) 1203
Hin1I GRCGYC 1 cut(s) 652
Hin6I GCGC 1 cut(s) 1201
HinP1I GCGC 1 cut(s) 1201
HincII GTYRAC 2 cut(s) 64, 249
HindII GTYRAC 2 cut(s) 64, 249
HindIII AAGCTT 2 cut(s) 1303, 2153
HinfI GANTC 5 cut(s) 107, 586, 1731, 1766, 1876
HpaII CCGG 4 cut(s) 452, 816, 1725, 1985
HphI GGTGA 4 cut(s) 152, 280, 1760, 2003
Hpy166II GTNNAC 6 cut(s) 19, 64, 249, 271, 564, 1786
Hpy188I TCNGA 8 cut(s) 295, 526, 667, 747, 1722, 1845, 1881, 1899
Hpy8I GTNNAC 6 cut(s) 19, 64, 249, 271, 564, 1786
HpyAV CCTTC 5 cut(s) 203, 1049, 1466, 1746, 2003
HpyCH4III ACNGT 4 cut(s) 92, 929, 1120, 2030
HpyCH4IV ACGT 1 cut(s) 2004
HpyCH4V TGCA 7 cut(s) 569, 1028, 1195, 1693, 2063, 2120, 2165
HpyF10VI GCNNNNNNNGC 3 cut(s) 679, 1209, 1870
HpyF3I CTNAG 7 cut(s) 263, 301, 460, 1316, 1835, 1890, 2127
HpySE526I ACGT 1 cut(s) 2004
Hsp92I GRCGYC 1 cut(s) 652
HspAI GCGC 1 cut(s) 1201
KpnI GGTACC 2 cut(s) 741, 1482
Ksp22I TGATCA 3 cut(s) 328, 496, 1906
LguI GCTCTTC 2 cut(s) 1053, 1662
LmnI GCTCC 1 cut(s) 2112
Lsp1109I GCAGC 1 cut(s) 2149
LweI GCATC 3 cut(s) 1015, 1418, 1483
MaeI CTAG 5 cut(s) 381, 389, 965, 1623, 1914
MaeII ACGT 1 cut(s) 2004
MaeIII GTNAC 3 cut(s) 1573, 1618, 1767
MfeI CAATTG 2 cut(s) 809, 2166
MflI RGATCY 1 cut(s) 967
MlsI TGGCCA 2 cut(s) 1105, 1454
MluNI TGGCCA 2 cut(s) 1105, 1454
MlyI GAGTC 3 cut(s) 116, 580, 1775
MmeI TCCRAC 1 cut(s) 770
Mox20I TGGCCA 2 cut(s) 1105, 1454
Mph1103I ATGCAT 1 cut(s) 2122
MroXI GAANNNNTTC 1 cut(s) 1735
MscI TGGCCA 2 cut(s) 1105, 1454
MseI TTAA 8 cut(s) 33, 191, 399, 407, 591, 711, 908, 2182
MslI CAYNNNNRTG 2 cut(s) 452, 1535
Msp20I TGGCCA 2 cut(s) 1105, 1454
MspCI CTTAAG 1 cut(s) 907
MspI CCGG 4 cut(s) 452, 816, 1725, 1985
MspR9I CCNGG 1 cut(s) 817
MunI CAATTG 2 cut(s) 809, 2166
Mva1269I GAATGC 2 cut(s) 1281, 2063
MwoI GCNNNNNNNGC 3 cut(s) 679, 1209, 1870
NciI CCSGG 1 cut(s) 817
NcoI CCATGG 4 cut(s) 136, 1339, 1449, 2108
NdeI CATATG 1 cut(s) 772
NlaIV GGNNCC 4 cut(s) 660, 739, 825, 1480
NmuCI GTSAC 2 cut(s) 1573, 1767
NsbI TGCGCA 1 cut(s) 1202
NsiI ATGCAT 1 cut(s) 2122
NspI RCATGY 1 cut(s) 718
NspV TTCGAA 1 cut(s) 353
PaeR7I CTCGAG 1 cut(s) 799
PciI ACATGT 1 cut(s) 714
PciSI GCTCTTC 2 cut(s) 1053, 1662
PctI GAATGC 2 cut(s) 1281, 2063
PdmI GAANNNNTTC 1 cut(s) 1735
PfeI GAWTC 2 cut(s) 1731, 1876
PflMI CCANNNNNTGG 1 cut(s) 1387
PinAI ACCGGT 1 cut(s) 1984
PkrI GCNGC 1 cut(s) 2164
PleI GAGTC 3 cut(s) 115, 580, 1774
PpsI GAGTC 3 cut(s) 115, 580, 1774
Ppu21I YACGTR 1 cut(s) 2005
PpuMI RGGWCCY 1 cut(s) 1548
PscI ACATGT 1 cut(s) 714
PsiI TTATAA 1 cut(s) 1401
Psp5II RGGWCCY 1 cut(s) 1548
PspN4I GGNNCC 4 cut(s) 660, 739, 825, 1480
PspPI GGNCC 6 cut(s) 658, 1298, 1390, 1548, 1630, 1940
PspPPI RGGWCCY 1 cut(s) 1548
PsuI RGATCY 1 cut(s) 967
RsaI GTAC 4 cut(s) 89, 739, 1100, 1480
RsaNI GTAC 4 cut(s) 88, 738, 1099, 1479
RseI CAYNNNNRTG 2 cut(s) 452, 1535
SapI GCTCTTC 2 cut(s) 1053, 1662
SaqAI TTAA 8 cut(s) 33, 191, 399, 407, 591, 711, 908, 2182
SatI GCNGC 1 cut(s) 2163
Sau96I GGNCC 6 cut(s) 658, 1298, 1390, 1548, 1630, 1940
SchI GAGTC 3 cut(s) 116, 580, 1775
ScrFI CCNGG 1 cut(s) 817
SfaNI GCATC 3 cut(s) 1015, 1418, 1483
SfcI CTRYAG 1 cut(s) 1363
Sfr274I CTCGAG 1 cut(s) 799
SfuI TTCGAA 1 cut(s) 353
SinI GGWCC 5 cut(s) 658, 1390, 1548, 1630, 1940
SlaI CTCGAG 1 cut(s) 799
SmiMI CAYNNNNRTG 2 cut(s) 452, 1535
SmlI CTYRAG 5 cut(s) 104, 487, 634, 799, 907
SmoI CTYRAG 5 cut(s) 104, 487, 634, 799, 907
SsiI CCGC 1 cut(s) 1938
SspMI CTAG 5 cut(s) 381, 389, 965, 1623, 1914
StyD4I CCNGG 1 cut(s) 815
StyI CCWWGG 6 cut(s) 136, 157, 228, 1339, 1449, 2108
TaaI ACNGT 4 cut(s) 92, 929, 1120, 2030
TaiI ACGT 1 cut(s) 2007
TaqI TCGA 8 cut(s) 149, 353, 510, 800, 914, 1071, 1186, 1820
TatI WGTACW 1 cut(s) 87
TfiI GAWTC 2 cut(s) 1731, 1876
Tru1I TTAA 8 cut(s) 33, 191, 399, 407, 591, 711, 908, 2182
Tru9I TTAA 8 cut(s) 33, 191, 399, 407, 591, 711, 908, 2182
TscAI CASTG 1 cut(s) 960
TseFI GTSAC 2 cut(s) 1573, 1767
TseI GCWGC 1 cut(s) 2162
Tsp45I GTSAC 2 cut(s) 1573, 1767
TspGWI ACGGA 1 cut(s) 1935
TspRI CASTG 1 cut(s) 960
Van91I CCANNNNNTGG 1 cut(s) 1387
Vha464I CTTAAG 1 cut(s) 907
VpaK11BI GGWCC 5 cut(s) 658, 1390, 1548, 1630, 1940
XbaI TCTAGA 1 cut(s) 964
XceI RCATGY 1 cut(s) 718
XhoI CTCGAG 1 cut(s) 799
XmnI GAANNNNTTC 1 cut(s) 1735
XspI CTAG 5 cut(s) 381, 389, 965, 1623, 1914
Zsp2I ATGCAT 1 cut(s) 2122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.