MD11G1217100.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
31679181 .. 31682024
2844 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1217100.v1.1.491

Sequence Viewer

Length: 2844 bp
ATGGATAGAGTCATGAGAGTTGGTTCACTAGTCAGCTTTCTCCTATGCATTGCGTCTTTTACAGTTAGCTTATGCAAGGGGGACCTGTATGTGCCTTGCAAAGAACATGAGAGACAAGCACTCCTTCTGTTCAAGAAAGATCTTGATGATCCGTCAAATATGCTTTCCTCCTGGGGTGGTGCAAGCGATTGTTGTAACTGGATCGGTGTTGCCTGTGATAATTTAACCGGTCATGTCCATGAGCTCCACCTTGCTGGTAATTATGATCAAGAAACTGGTGAGGAACACGGTTTGGGTGGTAATGTAAATCCTTCTCTACTCAATTTAAAGCATCTCAGCTACTTGAACTTGAGCTACAATAATTTTGAAGGACTACAAATTCCTAGCTTTCTAGGTTCTCTTAAAGGTTTAAGATATCTTGACCTCTCGTATGCAGGGTTCAATGGAACCATTCCTCATCAGTTGGGGAATCTCTCGAGTCTGCGTTATCTCGACCTTTCTCACAACTTTGGTTCGATGGTCGAGAATCTCAAATGGCTCTCTGGTCTTTCTCTGTTGAAACATCTTGACATGAGTTTTGTAGATCTTACCAACGCATCTCATTGGTTACAAGCAAATACACTCCCTTCTCTGCTAGTCGAGTTACATTTGTCTAGTTGCGAACTTTATCACATACCAAGTGGTATTGCGAACTTGACAAGTCTTAAAGTTCTTTATCTGCACCGGAACCATTTCAACTCTACCATACCTAAATGGTTGTACGGTTTGGGCCATCTTGAGTTCCTCTTTCTTTCTCAGAATGCTTTCCATGGTGAAATTTCGAGTTCCCTTGGAAACTTGACAGCCCTTGTTGATCTTAAATTGCGTAGCAATCAGCTTGAAGGGGAAATCCCAAACTCATTGGGAAATCTTTGTAAGTTGACTGCTATTGATCTATCGTCGAACAATTTTTGGGGGAGGGTATCAGCAATCTTTGAAAGTTTGTCTCGATGTAGTTCTGGTCAAATATATTATTTAGATTTGTTGGATAATAATTTTTCAGGTCATTTATCTAATCAACTTGAAAGTTTCAAAAATTTACGTTATCTTTATCTTTCAAATAATTCAATATCGGGTCCCGTTCCAGTGTCTTTAGGAAATCTATCACTCTTAGAGGAGTTGGCCATTGATAACAATTCATTCGAGGGTGTTATCTCTGAAGTTCATTTTACTAATCTTACAAGATTGATTAACTTTTTTGCAAATGAGAACTCTTTGACTCTTAAAACCAGCCCAGACTGGCTTCCTCCTTTTCAACTTTCTATCTTGACTTTAAGTTCATTGCATCTGGACCCATCAGAGTTACCTGCGTGGCTCAAGAGTCAAAAACATTTGTCCGCTCTTAACATGTCCAATACAGGAATTTCAGGTACAATTCCGATTTGGTTTTGGAACATTTATTCGAATGGTGCATATTTTGTGGATCTCTCGCGTAATCAGTTGTCCGGCGAGGTTCCAAACATAGTTTCCGCCAACTGGCCAAAACAACAGCGTTTCGATCCCCAAGTTTCAGGAATCCTAATTGACTTAAGGTCTAACCAGTTCAATGGTTCATTGCCTCTTGTGTCTTCGGCAGTGTCTACACTTGATCTTTCCAATTCATCATTTTCGGGAACTCTCTCTCACTTACTTTGTGATAGGAGCGATGTACCTAAAAACCTTCTTGTTCTTCATCTTGGCAACAATCTCCTCACTGGAGAAATTCCTGATTGTCGGTTACATTGGCCAAACTTGACAGTTGTGAATTTAGAAGACAACAATTTGATGGGGAAAATTCCAAGCTCTATCGGGGACCTACTTTCCCTTCGATCTTTGCACTTGCGCAATAATAAGCTATCTGGAGAATTACCTGTGTCCCTACAAAACTGTGAGCAGTTGTTACTTCTTGACCTTGGTGGAAACAAGTTTGCTGGAAGCTTTCCAATATGGTTTGGCCAAAGCTTGGTAGTTCTTAGTCTTCGTTCAAATCAGTTCCATGGCGCCATTCCTTATAAGCTCTGTAGTCTCACAAATCTCCAAATCTTGGACCTTGCGCATAACAATATTTCGGGAACGATACCCAGATGTTTCCAAAATTTGTCATCCATGGCCAATACCTTTTCAAGCGAAGGACCTACCAGTATTCAATTCTTGGATGCTTCTTTTTTCGGTTTTGGTCTTTTTGGGGAGTCCTACACAGAGACTGCAGTTTTTGTGACCAAAGGAAGAGAAGTGAACTATAACACAATGCTTCGGTTGGTCGCTAGTTTGGACCTTTCCAACAACATGTTAACTGGAGAAATCCCGGAAGCACTGACCAGTCTCATTAGCTTACAAACGTTGAATTTATCCGATAATCTTCTGACTGGAAGAATCCCTTCCAAAATCGGTGATATGAGAATGTTAGAGTCGCTTGATTTGTCCGTGAACCAACTTTGTGGCGAAGTTTCTCCAAGCATCTCAAACTTGACATTTCTCAATTATCTGAATTTGTCCTATAACAATCTGATAGGGCAGATTCCGAAAGGCACTCAGCTTCAAAGCTTTGATATGTCTAGTTATGCTGGCAATAAACTTTGCGGACCTCCATTGGAAGAGTGTCACAGTACAAAAGAGGCCATGCCACCGGTAGGTGATGAGAAGCACGGAGAAGGTCATTTACTTGAAGATGGCGGGTTCTATCTGAGCTTGGGGCTTGGATTTGCATTTGGGTTTTGGATTGTTCTTGGTTCATTGTTGTCTAATTTGCCGTGGAGCAATGCACTTTCTCAGTTCCAAAATATTATTGTGAAGAAGCTCTATGTTGTAATCGTTAAACGTCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

948

Amino Acids

104.5

Weight (kDa)

5.68

Isoelectric Point (pI)

32.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 73 7.7e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 105 - 192 1.6e-06 Leucine-rich repeat region
LRR_8 PF13855 111 - 169 1.2e-08 Leucine rich repeat
LRR_14 PF23598 172 - 316 8.6e-09 Leucine-rich repeat region
LRR_8 PF13855 212 - 268 1.8e-08 Leucine rich repeat
LRR_8 PF13855 660 - 709 8e-06 Leucine rich repeat
LRR_8 PF13855 760 - 818 1.6e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2031
Acc16I TGCGCA 2 cut(s) 1862, 2073
Acc36I ACCTGC 1 cut(s) 1354
AccB1I GGYRCC 1 cut(s) 2018
AccB7I CCANNNNNTGG 2 cut(s) 1981, 2062
AccBSI CCGCTC 1 cut(s) 1379
AccI GTMKAC 1 cut(s) 1619
AccII CGCG 1 cut(s) 1471
AciI CCGC 4 cut(s) 1377, 1509, 2598, 2691
AclI AACGTT 1 cut(s) 2357
AclWI GGATC 4 cut(s) 143, 209, 1470, 1532
AcoI YGGCCR 5 cut(s) 1161, 1517, 1763, 1972, 2127
AcuI CTGAAG 1 cut(s) 1218
AcyI GRCGYC 1 cut(s) 2019
AfaI GTAC 4 cut(s) 761, 1411, 1689, 2626
AfiI CCNNNNNNNGG 4 cut(s) 1515, 1981, 2062, 2648
AflII CTTAAG 1 cut(s) 1567
AflIII ACRYGT 2 cut(s) 1386, 2304
AgeI ACCGGT 2 cut(s) 227, 2644
AhdI GACNNNNNGTC 1 cut(s) 1570
AhlI ACTAGT 1 cut(s) 28
AjnI CCWGG 1 cut(s) 170
AjuI GAANNNNNNNTTGG 2 cut(s) 1489, 1521
Alw21I GWGCWC 1 cut(s) 246
Alw26I GTCTC 5 cut(s) 106, 990, 2048, 2213, 2345
AlwI GGATC 4 cut(s) 143, 209, 1470, 1532
AlwNI CAGNNNCTG 1 cut(s) 2222
Ama87I CYCGRG 1 cut(s) 475
AoxI GGCC 7 cut(s) 769, 1161, 1517, 1763, 1972, 2127, 2634
ArsI GACNNNNNNTTYG 2 cut(s) 560, 592
AsiGI ACCGGT 2 cut(s) 227, 2644
Asp700I GAANNNNTTC 3 cut(s) 731, 803, 2395
AspLEI GCGC 3 cut(s) 1863, 2021, 2074
AspS9I GGNCC 9 cut(s) 82, 769, 1115, 1330, 1831, 2065, 2150, 2290, 2600
AsuC2I CCSGG 1 cut(s) 2324
AsuHPI GGTGA 4 cut(s) 290, 824, 2420, 2663
AsuII TTCGAA 1 cut(s) 1442
AvaI CYCGRG 1 cut(s) 475
AvaII GGWCC 8 cut(s) 82, 1115, 1330, 1831, 2065, 2150, 2290, 2600
BalI TGGCCA 5 cut(s) 1163, 1519, 1765, 1974, 2129
BanI GGYRCC 1 cut(s) 2018
BanII GRGCYC 1 cut(s) 246
BarI GAAGNNNNNNTAC 2 cut(s) 2661, 2693
BbsI GAAGAC 3 cut(s) 1599, 1797, 1988
Bbv12I GWGCWC 1 cut(s) 246
BccI CCATC 5 cut(s) 511, 780, 1342, 1798, 2681
BceAI ACGGC 1 cut(s) 2752
BciT130I CCWGG 1 cut(s) 172
BclI TGATCA 1 cut(s) 265
BcnI CCSGG 1 cut(s) 2324
BcoDI GTCTC 5 cut(s) 106, 990, 2048, 2213, 2345
BcuI ACTAGT 1 cut(s) 28
BfaI CTAG 7 cut(s) 29, 384, 392, 635, 654, 2283, 2574
BfmI CTRYAG 2 cut(s) 2038, 2223
BfoI RGCGCY 1 cut(s) 2022
BfrI CTTAAG 1 cut(s) 1567
BfuAI ACCTGC 1 cut(s) 1354
BglII AGATCT 2 cut(s) 139, 583
Bme1390I CCNGG 2 cut(s) 172, 2324
Bme18I GGWCC 8 cut(s) 82, 1115, 1330, 1831, 2065, 2150, 2290, 2600
BmeRI GACNNNNNGTC 1 cut(s) 1570
BmeT110I CYCGRG 1 cut(s) 475
BmgT120I GGNCC 9 cut(s) 82, 769, 1115, 1330, 1831, 2065, 2150, 2290, 2600
BmiI GGNNCC 9 cut(s) 83, 448, 728, 1116, 1117, 1332, 1494, 1832, 2020
BmrFI CCNGG 2 cut(s) 172, 2324
BmsI GCATC 5 cut(s) 340, 605, 1333, 2164, 2484
BpiI GAAGAC 3 cut(s) 1599, 1797, 1988
BpmI CTGGAG 3 cut(s) 1755, 1899, 2334
Bpu14I TTCGAA 1 cut(s) 1442
BpuEI CTTGAG 3 cut(s) 370, 797, 1340
BpuMI CCSGG 1 cut(s) 2324
BsaHI GRCGYC 1 cut(s) 2019
BsaJI CCNNGG 7 cut(s) 171, 808, 829, 1930, 2014, 2124, 2768
BsaWI WCCGGW 3 cut(s) 227, 723, 2644
BsaXI ACNNNNNCTCC 2 cut(s) 105, 135
Bsc4I CCNNNNNNNGG 4 cut(s) 1515, 1981, 2062, 2648
Bse118I RCCGGY 2 cut(s) 227, 2644
Bse3DI GCAATG 4 cut(s) 48, 1319, 1592, 2782
BseBI CCWGG 1 cut(s) 172
BseDI CCNNGG 7 cut(s) 171, 808, 829, 1930, 2014, 2124, 2768
BseGI GGATG 2 cut(s) 2120, 2179
BseLI CCNNNNNNNGG 4 cut(s) 1515, 1981, 2062, 2648
BseMI GCAATG 4 cut(s) 48, 1319, 1592, 2782
BseMII CTCAG 5 cut(s) 349, 809, 2564, 2693, 2801
BseRI GAGGAG 2 cut(s) 1169, 1718
BsgI GTGCAG 1 cut(s) 704
Bsh1236I CGCG 1 cut(s) 1471
BshFI GGCC 7 cut(s) 771, 1163, 1519, 1765, 1974, 2129, 2636
BshNI GGYRCC 1 cut(s) 2018
BshTI ACCGGT 2 cut(s) 227, 2644
BsiHKAI GWGCWC 1 cut(s) 246
BsiHKCI CYCGRG 1 cut(s) 475
BsiSI CCGG 5 cut(s) 228, 724, 1485, 2324, 2645
BslFI GGGAC 4 cut(s) 95, 1101, 1844, 1879
BslI CCNNNNNNNGG 4 cut(s) 1515, 1981, 2062, 2648
BsmAI GTCTC 5 cut(s) 106, 990, 2048, 2213, 2345
BsmFI GGGAC 4 cut(s) 95, 1101, 1844, 1879
BsmI GAATGC 1 cut(s) 805
BsnI GGCC 7 cut(s) 771, 1163, 1519, 1765, 1974, 2129, 2636
BsoBI CYCGRG 1 cut(s) 475
Bsp119I TTCGAA 1 cut(s) 1442
Bsp1286I GDGCHC 1 cut(s) 246
Bsp19I CCATGG 3 cut(s) 808, 2014, 2124
BspACI CCGC 4 cut(s) 1377, 1509, 2598, 2691
BspANI GGCC 7 cut(s) 771, 1163, 1519, 1765, 1974, 2129, 2636
BspCNI CTCAG 5 cut(s) 348, 808, 2563, 2694, 2800
BspFNI CGCG 1 cut(s) 1471
BspHI TCATGA 1 cut(s) 12
BspLI GGNNCC 9 cut(s) 83, 448, 728, 1116, 1117, 1332, 1494, 1832, 2020
BspMAI CTGCAG 1 cut(s) 2227
BspMI ACCTGC 1 cut(s) 1354
BspPI GGATC 4 cut(s) 143, 209, 1470, 1532
BspT104I TTCGAA 1 cut(s) 1442
BspT107I GGYRCC 1 cut(s) 2018
BspTI CTTAAG 1 cut(s) 1567
BsrBI CCGCTC 1 cut(s) 1379
BsrDI GCAATG 4 cut(s) 48, 1319, 1592, 2782
BsrFI RCCGGY 2 cut(s) 227, 2644
BssAI RCCGGY 2 cut(s) 227, 2644
BssECI CCNNGG 7 cut(s) 171, 808, 829, 1930, 2014, 2124, 2768
BssNI GRCGYC 1 cut(s) 2019
BssT1I CCWWGG 5 cut(s) 808, 829, 1930, 2014, 2124
Bst2UI CCWGG 1 cut(s) 172
Bst4CI ACNGT 6 cut(s) 64, 290, 764, 1777, 1907, 2624
Bst6I CTCTTC 2 cut(s) 2239, 2607
BstACI GRCGYC 1 cut(s) 2019
BstAFI CTTAAG 1 cut(s) 1567
BstBI TTCGAA 1 cut(s) 1442
BstC8I GCNNGC 2 cut(s) 184, 2584
BstDEI CTNAG 7 cut(s) 335, 795, 1150, 1991, 2550, 2702, 2787
BstDSI CCRYGG 4 cut(s) 808, 2014, 2124, 2768
BstF5I GGATG 2 cut(s) 2120, 2179
BstFNI CGCG 1 cut(s) 1471
BstH2I RGCGCY 1 cut(s) 2022
BstHHI GCGC 3 cut(s) 1863, 2021, 2074
BstMAI GTCTC 5 cut(s) 106, 990, 2048, 2213, 2345
BstNI CCWGG 1 cut(s) 172
BstNSI RCATGY 2 cut(s) 1390, 2308
BstSCI CCNGG 2 cut(s) 170, 2322
BstSFI CTRYAG 2 cut(s) 2038, 2223
BstUI CGCG 1 cut(s) 1471
BstV2I GAAGAC 3 cut(s) 1599, 1797, 1988
BstX2I RGATCY 3 cut(s) 139, 583, 1462
BstXI CCANNNNNNTGG 3 cut(s) 254, 1586, 2456
BstYI RGATCY 3 cut(s) 139, 583, 1462
BsuRI GGCC 7 cut(s) 771, 1163, 1519, 1765, 1974, 2129, 2636
BtgI CCRYGG 4 cut(s) 808, 2014, 2124, 2768
BtgZI GCGATG 1 cut(s) 1698
BtsCI GGATG 2 cut(s) 2120, 2179
BtsI GCAGTG 1 cut(s) 1620
BtsIMutI CAGTG 4 cut(s) 1131, 1620, 1731, 2330
BveI ACCTGC 1 cut(s) 1354
Cac8I GCNNGC 2 cut(s) 184, 2584
CaiI CAGNNNCTG 1 cut(s) 2222
CciI TCATGA 1 cut(s) 12
CfoI GCGC 3 cut(s) 1863, 2021, 2074
Cfr10I RCCGGY 2 cut(s) 227, 2644
Cfr13I GGNCC 9 cut(s) 82, 769, 1115, 1330, 1831, 2065, 2150, 2290, 2600
CseI GACGC 1 cut(s) 42
Csp6I GTAC 4 cut(s) 760, 1410, 1688, 2625
CspAI ACCGGT 2 cut(s) 227, 2644
CviQI GTAC 4 cut(s) 760, 1410, 1688, 2625
DdeI CTNAG 7 cut(s) 335, 795, 1150, 1991, 2550, 2702, 2787
DinI GGCGCC 1 cut(s) 2020
DraI TTTAAA 1 cut(s) 327
DriI GACNNNNNGTC 1 cut(s) 1570
EaeI YGGCCR 5 cut(s) 1161, 1517, 1763, 1972, 2127
Eam1104I CTCTTC 2 cut(s) 2239, 2607
Eam1105I GACNNNNNGTC 1 cut(s) 1570
EarI CTCTTC 2 cut(s) 2239, 2607
EciI GGCGGA 1 cut(s) 1498
Ecl136II GAGCTC 1 cut(s) 244
Eco130I CCWWGG 5 cut(s) 808, 829, 1930, 2014, 2124
Eco24I GRGCYC 1 cut(s) 246
Eco32I GATATC 1 cut(s) 416
Eco47I GGWCC 8 cut(s) 82, 1115, 1330, 1831, 2065, 2150, 2290, 2600
Eco53kI GAGCTC 1 cut(s) 244
Eco57I CTGAAG 1 cut(s) 1218
Eco88I CYCGRG 1 cut(s) 475
EcoICRI GAGCTC 1 cut(s) 244
EcoO109I RGGNCCY 4 cut(s) 82, 1115, 1831, 2150
EcoRII CCWGG 1 cut(s) 170
EcoRV GATATC 1 cut(s) 416
EcoT14I CCWWGG 5 cut(s) 808, 829, 1930, 2014, 2124
EcoT22I ATGCAT 1 cut(s) 50
EcoT38I GRGCYC 1 cut(s) 246
EgeI GGCGCC 1 cut(s) 2020
EheI GGCGCC 1 cut(s) 2020
ErhI CCWWGG 5 cut(s) 808, 829, 1930, 2014, 2124
FalI AAGNNNNNCTT 4 cut(s) 108, 140, 2380, 2412
FaqI GGGAC 4 cut(s) 95, 1101, 1844, 1879
FauI CCCGC 1 cut(s) 2684
FbaI TGATCA 1 cut(s) 265
FblI GTMKAC 1 cut(s) 1619
FokI GGATG 2 cut(s) 2107, 2186
FriOI GRGCYC 1 cut(s) 246
FspBI CTAG 7 cut(s) 29, 384, 392, 635, 654, 2283, 2574
FspI TGCGCA 2 cut(s) 1862, 2073
GlaI GCGC 3 cut(s) 1862, 2020, 2073
GsuI CTGGAG 3 cut(s) 1755, 1899, 2334
HaeII RGCGCY 1 cut(s) 2022
HaeIII GGCC 7 cut(s) 771, 1163, 1519, 1765, 1974, 2129, 2636
HapII CCGG 5 cut(s) 228, 724, 1485, 2324, 2645
HgaI GACGC 1 cut(s) 42
HhaI GCGC 3 cut(s) 1863, 2021, 2074
Hin1I GRCGYC 1 cut(s) 2019
Hin6I GCGC 3 cut(s) 1861, 2019, 2072
HinP1I GCGC 3 cut(s) 1861, 2019, 2072
HincII GTYRAC 2 cut(s) 921, 2310
HindII GTYRAC 2 cut(s) 921, 2310
HindIII AAGCTT 3 cut(s) 1954, 1978, 2560
HpaI GTTAAC 1 cut(s) 2310
HpaII CCGG 5 cut(s) 228, 724, 1485, 2324, 2645
HphI GGTGA 4 cut(s) 290, 824, 2420, 2663
Hpy166II GTNNAC 6 cut(s) 26, 921, 1620, 2254, 2310, 2446
Hpy8I GTNNAC 6 cut(s) 26, 921, 1620, 2254, 2310, 2446
Hpy99I CGWCG 1 cut(s) 943
HpyCH4III ACNGT 6 cut(s) 64, 290, 764, 1777, 1907, 2624
HpyCH4IV ACGT 3 cut(s) 1081, 2357, 2836
HpyF3I CTNAG 7 cut(s) 335, 795, 1150, 1991, 2550, 2702, 2787
HpySE526I ACGT 3 cut(s) 1081, 2357, 2836
Hsp92I GRCGYC 1 cut(s) 2019
HspAI GCGC 3 cut(s) 1861, 2019, 2072
KasI GGCGCC 1 cut(s) 2018
KflI GGGWCCC 1 cut(s) 1115
Ksp22I TGATCA 1 cut(s) 265
KspAI GTTAAC 1 cut(s) 2310
LmnI GCTCC 3 cut(s) 249, 1680, 2772
LweI GCATC 5 cut(s) 340, 605, 1333, 2164, 2484
MaeI CTAG 7 cut(s) 29, 384, 392, 635, 654, 2283, 2574
MaeII ACGT 3 cut(s) 1081, 2357, 2836
MaeIII GTNAC 8 cut(s) 194, 606, 642, 1341, 1755, 1917, 2233, 2618
MbiI CCGCTC 1 cut(s) 1379
MflI RGATCY 3 cut(s) 139, 583, 1462
MhlI GDGCHC 1 cut(s) 246
MlsI TGGCCA 5 cut(s) 1163, 1519, 1765, 1974, 2129
MluNI TGGCCA 5 cut(s) 1163, 1519, 1765, 1974, 2129
Mly113I GGCGCC 1 cut(s) 2019
MlyI GAGTC 6 cut(s) 18, 487, 1252, 1369, 2216, 2435
MmeI TCCRAC 2 cut(s) 1005, 2322
Mox20I TGGCCA 5 cut(s) 1163, 1519, 1765, 1974, 2129
Mph1103I ATGCAT 1 cut(s) 50
MroXI GAANNNNTTC 3 cut(s) 731, 803, 2395
MscI TGGCCA 5 cut(s) 1163, 1519, 1765, 1974, 2129
MslI CAYNNNNRTG 1 cut(s) 237
Msp20I TGGCCA 5 cut(s) 1163, 1519, 1765, 1974, 2129
MspCI CTTAAG 1 cut(s) 1567
MspI CCGG 5 cut(s) 228, 724, 1485, 2324, 2645
MspR9I CCNGG 2 cut(s) 172, 2324
Mva1269I GAATGC 1 cut(s) 805
MvaI CCWGG 1 cut(s) 172
MvnI CGCG 1 cut(s) 1471
NarI GGCGCC 1 cut(s) 2019
NciI CCSGG 1 cut(s) 2324
NcoI CCATGG 3 cut(s) 808, 2014, 2124
NlaIV GGNNCC 9 cut(s) 83, 448, 728, 1116, 1117, 1332, 1494, 1832, 2020
NmuCI GTSAC 2 cut(s) 2233, 2618
NsbI TGCGCA 2 cut(s) 1862, 2073
NsiI ATGCAT 1 cut(s) 50
NspI RCATGY 2 cut(s) 1390, 2308
NspV TTCGAA 1 cut(s) 1442
PaeR7I CTCGAG 1 cut(s) 475
PagI TCATGA 1 cut(s) 12
PciI ACATGT 2 cut(s) 1386, 2304
PctI GAATGC 1 cut(s) 805
PdmI GAANNNNTTC 3 cut(s) 731, 803, 2395
PfeI GAWTC 5 cut(s) 469, 526, 1554, 2391, 2536
PflMI CCANNNNNTGG 2 cut(s) 1981, 2062
PfoI TCCNGGA 1 cut(s) 2322
PinAI ACCGGT 2 cut(s) 227, 2644
PleI GAGTC 6 cut(s) 17, 486, 1252, 1368, 2215, 2434
PluTI GGCGCC 1 cut(s) 2022
PpsI GAGTC 6 cut(s) 17, 486, 1252, 1368, 2215, 2434
PpuMI RGGWCCY 4 cut(s) 82, 1115, 1831, 2150
PscI ACATGT 2 cut(s) 1386, 2304
PsiI TTATAA 1 cut(s) 2031
Psp124BI GAGCTC 1 cut(s) 246
Psp1406I AACGTT 1 cut(s) 2357
Psp5II RGGWCCY 4 cut(s) 82, 1115, 1831, 2150
Psp6I CCWGG 1 cut(s) 170
PspGI CCWGG 1 cut(s) 170
PspN4I GGNNCC 9 cut(s) 83, 448, 728, 1116, 1117, 1332, 1494, 1832, 2020
PspPI GGNCC 9 cut(s) 82, 769, 1115, 1330, 1831, 2065, 2150, 2290, 2600
PspPPI RGGWCCY 4 cut(s) 82, 1115, 1831, 2150
PsrI GAACNNNNNNTAC 4 cut(s) 338, 370, 422, 454
PstI CTGCAG 1 cut(s) 2227
PstNI CAGNNNCTG 1 cut(s) 2222
PsuI RGATCY 3 cut(s) 139, 583, 1462
RsaI GTAC 4 cut(s) 761, 1411, 1689, 2626
RsaNI GTAC 4 cut(s) 760, 1410, 1688, 2625
RseI CAYNNNNRTG 1 cut(s) 237
SacI GAGCTC 1 cut(s) 246
Sau96I GGNCC 9 cut(s) 82, 769, 1115, 1330, 1831, 2065, 2150, 2290, 2600
SchI GAGTC 6 cut(s) 18, 487, 1252, 1369, 2216, 2435
ScrFI CCNGG 2 cut(s) 172, 2324
SduI GDGCHC 1 cut(s) 246
SfaNI GCATC 5 cut(s) 340, 605, 1333, 2164, 2484
SfcI CTRYAG 2 cut(s) 2038, 2223
SfoI GGCGCC 1 cut(s) 2020
Sfr274I CTCGAG 1 cut(s) 475
SfuI TTCGAA 1 cut(s) 1442
SinI GGWCC 8 cut(s) 82, 1115, 1330, 1831, 2065, 2150, 2290, 2600
SlaI CTCGAG 1 cut(s) 475
SmiMI CAYNNNNRTG 1 cut(s) 237
SmlI CTYRAG 5 cut(s) 349, 475, 776, 1355, 1567
SmoI CTYRAG 5 cut(s) 349, 475, 776, 1355, 1567
SpeI ACTAGT 1 cut(s) 28
SsiI CCGC 4 cut(s) 1377, 1509, 2598, 2691
SspDI GGCGCC 1 cut(s) 2018
SspI AATATT 2 cut(s) 2083, 2800
SspMI CTAG 7 cut(s) 29, 384, 392, 635, 654, 2283, 2574
SstI GAGCTC 1 cut(s) 246
StyD4I CCNGG 2 cut(s) 170, 2322
StyI CCWWGG 5 cut(s) 808, 829, 1930, 2014, 2124
TaaI ACNGT 6 cut(s) 64, 290, 764, 1777, 1907, 2624
TaiI ACGT 3 cut(s) 1084, 2360, 2839
TatI WGTACW 1 cut(s) 2624
TfiI GAWTC 5 cut(s) 469, 526, 1554, 2391, 2536
TscAI CASTG 4 cut(s) 1131, 1620, 1738, 2337
TseFI GTSAC 2 cut(s) 2233, 2618
Tsp45I GTSAC 2 cut(s) 2233, 2618
TspDTI ATGAA 7 cut(s) 1167, 1193, 1308, 1581, 1629, 1700, 2739
TspGWI ACGGA 3 cut(s) 141, 2431, 2679
TspRI CASTG 4 cut(s) 1131, 1620, 1738, 2337
Van91I CCANNNNNTGG 2 cut(s) 1981, 2062
Vha464I CTTAAG 1 cut(s) 1567
VpaK11BI GGWCC 8 cut(s) 82, 1115, 1330, 1831, 2065, 2150, 2290, 2600
XceI RCATGY 2 cut(s) 1390, 2308
XhoI CTCGAG 1 cut(s) 475
XmiI GTMKAC 1 cut(s) 1619
XmnI GAANNNNTTC 3 cut(s) 731, 803, 2395
XspI CTAG 7 cut(s) 29, 384, 392, 635, 654, 2283, 2574
Zsp2I ATGCAT 1 cut(s) 50
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.