pycom15g38010

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
37924506 .. 37927576
3071 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g38010.1

Sequence Viewer

Length: 2850 bp
ATGAACCATATCCATCACTGCCTGGAATTTCACTACTCTAAATTACTCATTCCTCACATCCATCACCTACTCCATATCTATACGATGACAGTCATGAGACTTGTTTACCTACTCACCTTTCTTCTATCCATTGCGTCTTTTACACTTACCTTATGCAATGGAAACCTGGTCCATTTGCCTTGCAAAGAAAATGAGAGACAAACACTTCTTATGTTCAAGAAAGATCTCGATGATTCTTCAAATATGCTTTCCTCTTGGGATGGTGAAGGCGATTGTTGCAACTGGACCGGTGTTGCCTGCAGTAATTTAACCGGTCATGTCTGTGAGCTCCACCTTGCTGGTTATTATGATGAAGTGACTGGTGAGCACCGTGGGCTGGGTGGCAAGGTAAATCCTTCTCTACTCAATTTAAAGCATCTCAACCACTTGGACTTAAGCTTCAACAATTTTGAAGGACTACAGATTCCCAGCTTTTTGGGTTCTCTTAAACGTTTAAGATATCTTGATCTCTCGAATGCAGCGTTCAACGGAACCATTCCTCATCAGTTGGGAAATCTCTCAAGTCTACATTATCTCGACCTTTCTAGCAACTCTGATTTGATGGTCGAGAATCTTGAATGGCTCTCTGGTCTTTCTCTGTTGAAACATCTTGACATGAGTGATGTAGATCTTACCAACGCATCTCGTTGGTTACAAGTAAACACACTCCCTTATCTGCTGGTAGAGTTACATTTTTCTGACTGCAAACTTCATCACATGCCAAGTGGTATTGTGAACTTGACAAATCTTAAAGTTCTTGATCTTGCTAACAATGATGTCAACTCTACCATACCTACATGGTTGTACAGTTCGGGCAATCTTGAGTCCCTCTATCTTTCTTTCAATGCTTTCCATGGTGAAATTTCGAGTTCCCTTGGAAACTTGACAAACCTTGTTCATCTTCAATTAAGGGGGAATGAGCTTGAAGGGGAAATCCCAAACTCCTTGGGAAATCTTTGTAAGTTGACTTCTGTTGGTCTAGGGATGAACAATTTTAGGGGGAGGGTATCAAAAATCTTAGAAAGTTTGTCTCGGTGTAGTTCTGATCAAATAGATCAATTAGGTTTTTCGAAGAATAATTTTTCAGGTCATTTATCTGGTATGCTAGGAATTTTTAAAAATTTAAGTTCTCTTGATCTTTCGTATAATTCTATATCAGGTCTCATTCCGGTATCCCTAAGAAATCTATCACGCTTACAATACTTGGTCATTGATCATAATTCATTCGAGGGTGTTGTCTCTGAAGCTCATTTTGCTCATCTTACAAGATTGAAAATGTTTACTGCAAATGATAACTCCTTGACTCTTAAAACCAACTATGACTGGGTTCCTCCTTTTCAACTTTCTACCTTGAGTTTAGGTTCTTGGCGTCTGGACCCATCAGAGTTGCCTACATGGCTTCAAAGTCAAAATCAGTTGTCTGTTCTTAACATGTCCAATACAGGAATTTCAGGTACCATTCCAACTTGGTTCTGGAACATCTTTTCACATGATGCAGAAAACTATGTGGTTCTCTCGAGTAATCAATTGTCCGGGGAGGTTCCAAACATAGTTTCTGCCAATTGGCCAAAACCAAAACAGGATTCCGATTCTTTCCATATGGGTTTAAATTTTGTAATTGACCTAAGATCGATCAAGTTCAACGGTTCATTGCCTCTTGTGTCTTCGGCAGTGTCAATTCTTGATCTTTCCAATTCATCATTTTCGGGAACTCTCTCTCACTTCTTTTGTGATAGGAGTGATGTACCTAAAACCCTTCAAGTTCTTTATCTTGACAATAATCTCCTCGATGGAGAAATTCCTGATTGTCTGTTATACTGGCCATACTTGACAACTGTGAATTTAGAAGACAACAATTTGACAGGGAAAATTCCAAGCTCTATTGGAGACTTACTTACGCTTCGATCATTGCACTTGCGCAATAATAGCCTATCTGGAGAATTACCCGTGTCCCTACAAAATTGTGAGTGGTTGTTTCTTCTTGACCTTGCTGGAAACAAGTTTGTTGGAGGCATTCCAATATGGTTTGGCCCAAGCTTGGCAGTTCTTAGTCTTCGTTCAAATAAGTTCCATGGTTTCATTCCAGATGAACTCTGTAGTCTCACAAATCTCCAAATCTTGGACCTTGCTTATAACAATCTCTCGGGAACGATACCAAGATGCTTCCAAAAATTTTCATCCATGGCCACTACCATTTCAAGCGAAAAAGGCAGAGAAGTGAAATATGACACAGTGCTTCGTTTGGTAACTAGCTTGGACCTTTCCAGCAACATGATATATGGAGAAATCCCCGAAGAGCTGACCAGCCTCATTATCTTGCAAACATTGAATTTATCCAATAATCTTCTGACTGGAAGAATCCCTTCCAAAATCGGTGATATGAAAATGTTAGAGTCACTTGATTTGTCCGTGAACCAACTTTCTGGCGAAATTTCTCCAAGCATATCGAACTTGACATTTCTCGATTATCTGAATTTGTCCTATAACAATATGATAGGGCAGATTCCAATAAGCACTCAGCTTCAGAGCTTTGATCAGTCTAGTTATGTTGGCAATAAACTATGCGGACCTCCATTGGAAGAGCGTTGCAGTATAAATGAGGCGATGCCACCGGTAGGTGATGACGAGCACATAGAAGGTCATTTACTTGAAGACGGTGGGTTCTATTTGAGCTTGGGGCTTGGATTTGCATTCGGGTTTTGGATTGTTCTTGGTTCATTGTTGTCTAATGTGCCATGGAGCAATGCATTTTCTCAGTTCCAAAATCGCATTGTGAAGAAGCTCTATGCTGCAATTGTTGAATGTTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

950

Amino Acids

105.67

Weight (kDa)

5.41

Isoelectric Point (pI)

34.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 64 - 101 2.6e-12 Leucine rich repeat N-terminal domain
LRR_8 PF13855 139 - 197 2.1e-07 Leucine rich repeat
LRR_14 PF23598 204 - 440 6.7e-10 Leucine-rich repeat region
LRR_8 PF13855 385 - 421 1.2e-06 Leucine rich repeat
LRR_8 PF13855 387 - 447 7.7e-08 Leucine rich repeat
LRR_8 PF13855 621 - 681 9e-06 Leucine rich repeat
LRR_8 PF13855 691 - 740 6.6e-06 Leucine rich repeat
LRR_8 PF13855 762 - 820 9.1e-06 Leucine rich repeat
LRR_4 PF12799 809 - 849 7.2e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2172
Acc16I TGCGCA 1 cut(s) 1958
Acc65I GGTACC 1 cut(s) 1493
AccB1I GGYRCC 1 cut(s) 1493
AccB7I CCANNNNNTGG 1 cut(s) 2158
AccI GTMKAC 1 cut(s) 565
AciI CCGC 1 cut(s) 2604
AclI AACGTT 1 cut(s) 490
AcoI YGGCCR 3 cut(s) 1604, 1859, 2223
AcuI CTGAAG 2 cut(s) 1302, 2546
AcyI GRCGYC 1 cut(s) 1408
AfaI GTAC 3 cut(s) 845, 1495, 1785
AfiI CCNNNNNNNGG 4 cut(s) 376, 2077, 2158, 2654
AflII CTTAAG 1 cut(s) 433
AflIII ACRYGT 1 cut(s) 1470
AgeI ACCGGT 3 cut(s) 287, 311, 2650
AjnI CCWGG 2 cut(s) 21, 165
AjuI GAANNNNNNNTTGG 4 cut(s) 1576, 1606, 1608, 1638
Alw21I GWGCWC 3 cut(s) 330, 369, 2670
Alw26I GTCTC 7 cut(s) 91, 190, 1074, 1205, 1282, 1920, 2144
Ama87I CYCGRG 2 cut(s) 1555, 2182
AoxI GGCC 4 cut(s) 1604, 1859, 2068, 2223
ApeKI GCWGC 2 cut(s) 518, 2828
AsiGI ACCGGT 3 cut(s) 287, 311, 2650
Asp700I GAANNNNTTC 1 cut(s) 2401
Asp718I GGTACC 1 cut(s) 1493
AspLEI GCGC 1 cut(s) 1959
AspS9I GGNCC 7 cut(s) 169, 285, 1414, 2069, 2161, 2296, 2606
AsuC2I CCSGG 1 cut(s) 1573
AsuHPI GGTGA 7 cut(s) 56, 106, 275, 374, 908, 2426, 2669
AsuII TTCGAA 1 cut(s) 1109
AvaI CYCGRG 2 cut(s) 1555, 2182
AvaII GGWCC 6 cut(s) 169, 285, 1414, 2161, 2296, 2606
BalI TGGCCA 3 cut(s) 1606, 1861, 2225
BanI GGYRCC 1 cut(s) 1493
BanII GRGCYC 1 cut(s) 330
BarI GAAGNNNNNNTAC 4 cut(s) 991, 1023, 2667, 2699
BbsI GAAGAC 4 cut(s) 1695, 1893, 2084, 2697
Bbv12I GWGCWC 3 cut(s) 330, 369, 2670
BbvI GCAGC 2 cut(s) 530, 2815
BccI CCATC 6 cut(s) 21, 69, 254, 595, 1426, 1823
BciT130I CCWGG 2 cut(s) 23, 167
BciVI GTATCC 1 cut(s) 1222
BclI TGATCA 3 cut(s) 1084, 1252, 2572
BcnI CCSGG 1 cut(s) 1573
BcoDI GTCTC 7 cut(s) 91, 190, 1074, 1205, 1282, 1920, 2144
BfaI CTAG 5 cut(s) 585, 1019, 1145, 2289, 2580
BfmI CTRYAG 3 cut(s) 298, 458, 2134
BfrI CTTAAG 1 cut(s) 433
BfuI GTATCC 1 cut(s) 1222
BglI GCCNNNNNGGC 1 cut(s) 1435
BglII AGATCT 2 cut(s) 223, 667
BisI GCNGC 2 cut(s) 519, 2829
BlsI GCNGC 2 cut(s) 520, 2830
Bme1390I CCNGG 3 cut(s) 23, 167, 1573
Bme18I GGWCC 6 cut(s) 169, 285, 1414, 2161, 2296, 2606
BmeT110I CYCGRG 2 cut(s) 1555, 2182
BmgT120I GGNCC 7 cut(s) 169, 285, 1414, 2069, 2161, 2296, 2606
BmiI GGNNCC 5 cut(s) 532, 1368, 1416, 1495, 1581
BmrFI CCNGG 3 cut(s) 23, 167, 1573
BmrI ACTGGG 1 cut(s) 1372
BmsI GCATC 5 cut(s) 424, 689, 1522, 2189, 2634
BmuI ACTGGG 1 cut(s) 1372
BpiI GAAGAC 4 cut(s) 1695, 1893, 2084, 2697
BpmI CTGGAG 1 cut(s) 1995
Bpu14I TTCGAA 1 cut(s) 1109
BpuEI CTTGAG 3 cut(s) 544, 881, 1411
BpuMI CCSGG 1 cut(s) 1573
Bsa29I ATCGAT 1 cut(s) 1670
BsaBI GATNNNNATC 1 cut(s) 666
BsaHI GRCGYC 1 cut(s) 1408
BsaI GGTCTC 1 cut(s) 1205
BsaJI CCNNGG 8 cut(s) 370, 892, 913, 984, 1572, 2110, 2220, 2774
BsaWI WCCGGW 4 cut(s) 287, 311, 1207, 2650
Bsc4I CCNNNNNNNGG 4 cut(s) 376, 2077, 2158, 2654
Bse118I RCCGGY 3 cut(s) 287, 311, 2650
Bse1I ACTGG 5 cut(s) 287, 364, 1367, 1862, 2395
Bse3DI GCAATG 5 cut(s) 129, 163, 1688, 1946, 2788
Bse8I GATNNNNATC 1 cut(s) 666
BseBI CCWGG 2 cut(s) 23, 167
BseCI ATCGAT 1 cut(s) 1670
BseDI CCNNGG 8 cut(s) 370, 892, 913, 984, 1572, 2110, 2220, 2774
BseGI GGATG 4 cut(s) 57, 265, 1029, 2216
BseJI GATNNNNATC 1 cut(s) 666
BseLI CCNNNNNNNGG 4 cut(s) 376, 2077, 2158, 2654
BseMI GCAATG 5 cut(s) 129, 163, 1688, 1946, 2788
BseMII CTCAG 2 cut(s) 2570, 2807
BseNI ACTGG 5 cut(s) 287, 364, 1367, 1862, 2395
BseRI GAGGAG 1 cut(s) 1814
BseXI GCAGC 2 cut(s) 530, 2815
BseYI CCCAGC 2 cut(s) 376, 467
BshFI GGCC 4 cut(s) 1606, 1861, 2070, 2225
BshNI GGYRCC 1 cut(s) 1493
BshTI ACCGGT 3 cut(s) 287, 311, 2650
BshVI ATCGAT 1 cut(s) 1670
BsiHKAI GWGCWC 3 cut(s) 330, 369, 2670
BsiHKCI CYCGRG 2 cut(s) 1555, 2182
BsiSI CCGG 5 cut(s) 288, 312, 1208, 1572, 2651
BslFI GGGAC 2 cut(s) 850, 1975
BslI CCNNNNNNNGG 4 cut(s) 376, 2077, 2158, 2654
BsmAI GTCTC 7 cut(s) 91, 190, 1074, 1205, 1282, 1920, 2144
BsmFI GGGAC 2 cut(s) 850, 1975
BsmI GAATGC 3 cut(s) 520, 2052, 2729
BsnI GGCC 4 cut(s) 1606, 1861, 2070, 2225
Bso31I GGTCTC 1 cut(s) 1205
BsoBI CYCGRG 2 cut(s) 1555, 2182
Bsp119I TTCGAA 1 cut(s) 1109
Bsp1286I GDGCHC 3 cut(s) 330, 369, 2670
Bsp1407I TGTACA 1 cut(s) 843
Bsp19I CCATGG 4 cut(s) 892, 2110, 2220, 2774
BspACI CCGC 1 cut(s) 2604
BspANI GGCC 4 cut(s) 1606, 1861, 2070, 2225
BspCNI CTCAG 2 cut(s) 2569, 2806
BspDI ATCGAT 1 cut(s) 1670
BspHI TCATGA 1 cut(s) 93
BspLI GGNNCC 5 cut(s) 532, 1368, 1416, 1495, 1581
BspMAI CTGCAG 1 cut(s) 302
BspQI GCTCTTC 2 cut(s) 2328, 2613
BspT104I TTCGAA 1 cut(s) 1109
BspT107I GGYRCC 1 cut(s) 1493
BspTI CTTAAG 1 cut(s) 433
BspTNI GGTCTC 1 cut(s) 1205
BsrDI GCAATG 5 cut(s) 129, 163, 1688, 1946, 2788
BsrFI RCCGGY 3 cut(s) 287, 311, 2650
BsrGI TGTACA 1 cut(s) 843
BsrI ACTGG 5 cut(s) 287, 364, 1367, 1862, 2395
BssAI RCCGGY 3 cut(s) 287, 311, 2650
BssECI CCNNGG 8 cut(s) 370, 892, 913, 984, 1572, 2110, 2220, 2774
BssNI GRCGYC 1 cut(s) 1408
BssT1I CCWWGG 6 cut(s) 892, 913, 984, 2110, 2220, 2774
Bst2UI CCWGG 2 cut(s) 23, 167
Bst4CI ACNGT 7 cut(s) 91, 371, 848, 1685, 1876, 2272, 2696
Bst6I CTCTTC 2 cut(s) 2328, 2613
BstACI GRCGYC 1 cut(s) 1408
BstAFI CTTAAG 1 cut(s) 433
BstAUI TGTACA 1 cut(s) 843
BstBI TTCGAA 1 cut(s) 1109
BstC8I GCNNGC 1 cut(s) 298
BstDEI CTNAG 6 cut(s) 1057, 1217, 1664, 2087, 2556, 2793
BstDSI CCRYGG 5 cut(s) 370, 892, 2110, 2220, 2774
BstF5I GGATG 4 cut(s) 57, 265, 1029, 2216
BstHHI GCGC 1 cut(s) 1959
BstMAI GTCTC 7 cut(s) 91, 190, 1074, 1205, 1282, 1920, 2144
BstMWI GCNNNNNNNGC 6 cut(s) 276, 373, 1292, 1435, 1965, 2247
BstNI CCWGG 2 cut(s) 23, 167
BstNSI RCATGY 2 cut(s) 760, 1474
BstSCI CCNGG 3 cut(s) 21, 165, 1571
BstSFI CTRYAG 3 cut(s) 298, 458, 2134
BstV1I GCAGC 2 cut(s) 530, 2815
BstV2I GAAGAC 4 cut(s) 1695, 1893, 2084, 2697
BstX2I RGATCY 2 cut(s) 223, 667
BstXI CCANNNNNNTGG 3 cut(s) 338, 475, 2462
BstYI RGATCY 2 cut(s) 223, 667
Bsu15I ATCGAT 1 cut(s) 1670
BsuI GTATCC 1 cut(s) 1222
BsuRI GGCC 4 cut(s) 1606, 1861, 2070, 2225
BsuTUI ATCGAT 1 cut(s) 1670
BtgI CCRYGG 5 cut(s) 370, 892, 2110, 2220, 2774
BtgZI GCGATG 1 cut(s) 2657
BtsCI GGATG 4 cut(s) 57, 265, 1029, 2216
BtsI GCAGTG 2 cut(s) 16, 1716
BtsIMutI CAGTG 3 cut(s) 16, 1716, 2277
Cac8I GCNNGC 1 cut(s) 298
CciI TCATGA 1 cut(s) 93
CfoI GCGC 1 cut(s) 1959
Cfr10I RCCGGY 3 cut(s) 287, 311, 2650
Cfr13I GGNCC 7 cut(s) 169, 285, 1414, 2069, 2161, 2296, 2606
ClaI ATCGAT 1 cut(s) 1670
CseI GACGC 2 cut(s) 123, 1397
CsiI ACCWGGT 1 cut(s) 165
Csp6I GTAC 3 cut(s) 844, 1494, 1784
CspAI ACCGGT 3 cut(s) 287, 311, 2650
CviQI GTAC 3 cut(s) 844, 1494, 1784
DdeI CTNAG 6 cut(s) 1057, 1217, 1664, 2087, 2556, 2793
DraI TTTAAA 3 cut(s) 411, 1156, 1647
EaeI YGGCCR 3 cut(s) 1604, 1859, 2223
Eam1104I CTCTTC 2 cut(s) 2328, 2613
EarI CTCTTC 2 cut(s) 2328, 2613
Ecl136II GAGCTC 1 cut(s) 328
Eco130I CCWWGG 6 cut(s) 892, 913, 984, 2110, 2220, 2774
Eco24I GRGCYC 1 cut(s) 330
Eco31I GGTCTC 1 cut(s) 1205
Eco32I GATATC 1 cut(s) 500
Eco47I GGWCC 6 cut(s) 169, 285, 1414, 2161, 2296, 2606
Eco53kI GAGCTC 1 cut(s) 328
Eco57I CTGAAG 2 cut(s) 1302, 2546
Eco88I CYCGRG 2 cut(s) 1555, 2182
EcoICRI GAGCTC 1 cut(s) 328
EcoRII CCWGG 2 cut(s) 21, 165
EcoRV GATATC 1 cut(s) 500
EcoT14I CCWWGG 6 cut(s) 892, 913, 984, 2110, 2220, 2774
EcoT22I ATGCAT 1 cut(s) 2788
EcoT38I GRGCYC 1 cut(s) 330
ErhI CCWWGG 6 cut(s) 892, 913, 984, 2110, 2220, 2774
FalI AAGNNNNNCTT 2 cut(s) 2386, 2418
FaqI GGGAC 2 cut(s) 850, 1975
FauNDI CATATG 1 cut(s) 1638
FbaI TGATCA 3 cut(s) 1084, 1252, 2572
FblI GTMKAC 1 cut(s) 565
Fnu4HI GCNGC 2 cut(s) 519, 2829
FokI GGATG 4 cut(s) 44, 272, 1036, 2203
FriOI GRGCYC 1 cut(s) 330
Fsp4HI GCNGC 2 cut(s) 519, 2829
FspBI CTAG 5 cut(s) 585, 1019, 1145, 2289, 2580
FspI TGCGCA 1 cut(s) 1958
GlaI GCGC 1 cut(s) 1958
GluI GCNGC 2 cut(s) 519, 2829
GsaI CCCAGC 2 cut(s) 380, 471
GsuI CTGGAG 1 cut(s) 1995
HaeIII GGCC 4 cut(s) 1606, 1861, 2070, 2225
HapII CCGG 5 cut(s) 288, 312, 1208, 1572, 2651
HgaI GACGC 2 cut(s) 123, 1397
HhaI GCGC 1 cut(s) 1959
Hin1I GRCGYC 1 cut(s) 1408
Hin6I GCGC 1 cut(s) 1957
HinP1I GCGC 1 cut(s) 1957
HincII GTYRAC 2 cut(s) 820, 1005
HindII GTYRAC 2 cut(s) 820, 1005
HindIII AAGCTT 2 cut(s) 436, 2074
HpaII CCGG 5 cut(s) 288, 312, 1208, 1572, 2651
HphI GGTGA 7 cut(s) 56, 106, 275, 374, 908, 2426, 2669
Hpy166II GTNNAC 8 cut(s) 106, 566, 700, 775, 820, 1005, 1320, 2452
Hpy188I TCNGA 9 cut(s) 595, 739, 1084, 1282, 1423, 1627, 2388, 2511, 2565
Hpy8I GTNNAC 8 cut(s) 106, 566, 700, 775, 820, 1005, 1320, 2452
HpyAV CCTTC 7 cut(s) 260, 405, 446, 959, 1805, 2412, 2669
HpyCH4III ACNGT 7 cut(s) 91, 371, 848, 1685, 1876, 2272, 2696
HpyCH4IV ACGT 1 cut(s) 490
HpyF10VI GCNNNNNNNGC 6 cut(s) 276, 373, 1292, 1435, 1965, 2247
HpyF3I CTNAG 6 cut(s) 1057, 1217, 1664, 2087, 2556, 2793
HpySE526I ACGT 1 cut(s) 490
Hsp92I GRCGYC 1 cut(s) 1408
HspAI GCGC 1 cut(s) 1957
KpnI GGTACC 1 cut(s) 1497
Ksp22I TGATCA 3 cut(s) 1084, 1252, 2572
LguI GCTCTTC 2 cut(s) 2328, 2613
LmnI GCTCC 2 cut(s) 333, 2778
Lsp1109I GCAGC 2 cut(s) 530, 2815
LweI GCATC 5 cut(s) 424, 689, 1522, 2189, 2634
MabI ACCWGGT 1 cut(s) 165
MaeI CTAG 5 cut(s) 585, 1019, 1145, 2289, 2580
MaeII ACGT 1 cut(s) 490
MaeIII GTNAC 5 cut(s) 355, 690, 726, 2284, 2433
MfeI CAATTG 3 cut(s) 1565, 1600, 2832
MflI RGATCY 2 cut(s) 223, 667
MhlI GDGCHC 3 cut(s) 330, 369, 2670
MlsI TGGCCA 3 cut(s) 1606, 1861, 2225
MluNI TGGCCA 3 cut(s) 1606, 1861, 2225
MlyI GAGTC 3 cut(s) 872, 1336, 2441
MmeI TCCRAC 2 cut(s) 1526, 2026
Mox20I TGGCCA 3 cut(s) 1606, 1861, 2225
Mph1103I ATGCAT 1 cut(s) 2788
MroXI GAANNNNTTC 1 cut(s) 2401
MscI TGGCCA 3 cut(s) 1606, 1861, 2225
MslI CAYNNNNRTG 1 cut(s) 321
Msp20I TGGCCA 3 cut(s) 1606, 1861, 2225
MspCI CTTAAG 1 cut(s) 433
MspI CCGG 5 cut(s) 288, 312, 1208, 1572, 2651
MspR9I CCNGG 3 cut(s) 23, 167, 1573
MunI CAATTG 3 cut(s) 1565, 1600, 2832
Mva1269I GAATGC 3 cut(s) 520, 2052, 2729
MvaI CCWGG 2 cut(s) 23, 167
MwoI GCNNNNNNNGC 6 cut(s) 276, 373, 1292, 1435, 1965, 2247
NciI CCSGG 1 cut(s) 1573
NcoI CCATGG 4 cut(s) 892, 2110, 2220, 2774
NdeI CATATG 1 cut(s) 1638
NlaIV GGNNCC 5 cut(s) 532, 1368, 1416, 1495, 1581
NmuCI GTSAC 2 cut(s) 355, 2433
NsbI TGCGCA 1 cut(s) 1958
NsiI ATGCAT 1 cut(s) 2788
NspI RCATGY 2 cut(s) 760, 1474
NspV TTCGAA 1 cut(s) 1109
PaeR7I CTCGAG 1 cut(s) 1555
PagI TCATGA 1 cut(s) 93
PciI ACATGT 1 cut(s) 1470
PciSI GCTCTTC 2 cut(s) 2328, 2613
PcsI WCGNNNNNNNCGW 1 cut(s) 518
PctI GAATGC 3 cut(s) 520, 2052, 2729
PdmI GAANNNNTTC 1 cut(s) 2401
PfeI GAWTC 7 cut(s) 233, 463, 610, 1622, 1628, 2397, 2542
PflMI CCANNNNNTGG 1 cut(s) 2158
PinAI ACCGGT 3 cut(s) 287, 311, 2650
PkrI GCNGC 2 cut(s) 520, 2830
PleI GAGTC 3 cut(s) 871, 1336, 2440
PpsI GAGTC 3 cut(s) 871, 1336, 2440
PscI ACATGT 1 cut(s) 1470
PsiI TTATAA 1 cut(s) 2172
Psp124BI GAGCTC 1 cut(s) 330
Psp1406I AACGTT 1 cut(s) 490
Psp6I CCWGG 2 cut(s) 21, 165
PspFI CCCAGC 2 cut(s) 376, 467
PspGI CCWGG 2 cut(s) 21, 165
PspN4I GGNNCC 5 cut(s) 532, 1368, 1416, 1495, 1581
PspPI GGNCC 7 cut(s) 169, 285, 1414, 2069, 2161, 2296, 2606
PstI CTGCAG 1 cut(s) 302
PsuI RGATCY 2 cut(s) 223, 667
RsaI GTAC 3 cut(s) 845, 1495, 1785
RsaNI GTAC 3 cut(s) 844, 1494, 1784
RseI CAYNNNNRTG 1 cut(s) 321
SacI GAGCTC 1 cut(s) 330
SapI GCTCTTC 2 cut(s) 2328, 2613
SatI GCNGC 2 cut(s) 519, 2829
Sau96I GGNCC 7 cut(s) 169, 285, 1414, 2069, 2161, 2296, 2606
SchI GAGTC 3 cut(s) 872, 1336, 2441
ScrFI CCNGG 3 cut(s) 23, 167, 1573
SduI GDGCHC 3 cut(s) 330, 369, 2670
SexAI ACCWGGT 1 cut(s) 165
SfaNI GCATC 5 cut(s) 424, 689, 1522, 2189, 2634
SfcI CTRYAG 3 cut(s) 298, 458, 2134
Sfr274I CTCGAG 1 cut(s) 1555
SfuI TTCGAA 1 cut(s) 1109
SinI GGWCC 6 cut(s) 169, 285, 1414, 2161, 2296, 2606
SlaI CTCGAG 1 cut(s) 1555
SmiMI CAYNNNNRTG 1 cut(s) 321
SmlI CTYRAG 5 cut(s) 433, 559, 860, 1390, 1555
SmoI CTYRAG 5 cut(s) 433, 559, 860, 1390, 1555
SsiI CCGC 1 cut(s) 2604
SspMI CTAG 5 cut(s) 585, 1019, 1145, 2289, 2580
SstI GAGCTC 1 cut(s) 330
StyD4I CCNGG 3 cut(s) 21, 165, 1571
StyI CCWWGG 6 cut(s) 892, 913, 984, 2110, 2220, 2774
TaaI ACNGT 7 cut(s) 91, 371, 848, 1685, 1876, 2272, 2696
TaiI ACGT 1 cut(s) 493
TatI WGTACW 1 cut(s) 843
TfiI GAWTC 7 cut(s) 233, 463, 610, 1622, 1628, 2397, 2542
TscAI CASTG 3 cut(s) 23, 1716, 2277
TseFI GTSAC 2 cut(s) 355, 2433
TseI GCWGC 2 cut(s) 518, 2828
Tsp45I GTSAC 2 cut(s) 355, 2433
TspGWI ACGGA 2 cut(s) 543, 2437
TspRI CASTG 3 cut(s) 23, 1716, 2277
Van91I CCANNNNNTGG 1 cut(s) 2158
Vha464I CTTAAG 1 cut(s) 433
VpaK11BI GGWCC 6 cut(s) 169, 285, 1414, 2161, 2296, 2606
XceI RCATGY 2 cut(s) 760, 1474
XcmI CCANNNNNNNNNTGG 1 cut(s) 1509
XhoI CTCGAG 1 cut(s) 1555
XmiI GTMKAC 1 cut(s) 565
XmnI GAANNNNTTC 1 cut(s) 2401
XspI CTAG 5 cut(s) 585, 1019, 1145, 2289, 2580
Zsp2I ATGCAT 1 cut(s) 2788
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.